View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10760_low_29 (Length: 205)

Name: NF10760_low_29
Description: NF10760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10760_low_29
NF10760_low_29
[»] chr3 (73 HSPs)
chr3 (11-185)||(19339293-19339467)
chr3 (12-185)||(21533605-21533779)
chr3 (11-181)||(9998584-9998755)
chr3 (12-185)||(52922913-52923087)
chr3 (12-185)||(46304317-46304490)
chr3 (28-173)||(18011155-18011300)
chr3 (28-185)||(21313171-21313328)
chr3 (38-181)||(10108381-10108524)
chr3 (12-185)||(6954492-6954666)
chr3 (28-146)||(10229611-10229729)
chr3 (12-185)||(40487443-40487617)
chr3 (28-130)||(42460884-42460986)
chr3 (28-185)||(628720-628876)
chr3 (28-185)||(37040904-37041060)
chr3 (28-185)||(45568241-45568398)
chr3 (28-136)||(53807703-53807811)
chr3 (12-130)||(21431731-21431850)
chr3 (28-185)||(43017023-43017180)
chr3 (28-185)||(47041844-47042001)
chr3 (28-185)||(48650530-48650687)
chr3 (12-147)||(4711600-4711736)
chr3 (29-89)||(23799802-23799862)
chr3 (38-185)||(9797330-9797477)
chr3 (33-112)||(27706095-27706174)
chr3 (28-130)||(19619848-19619950)
chr3 (28-130)||(27856300-27856402)
chr3 (28-114)||(38859979-38860065)
chr3 (12-185)||(43488387-43488560)
chr3 (28-181)||(10233205-10233358)
chr3 (33-130)||(21289665-21289762)
chr3 (28-185)||(33580015-33580172)
chr3 (28-185)||(40556837-40556994)
chr3 (12-180)||(54149109-54149278)
chr3 (12-147)||(32701609-32701745)
chr3 (11-113)||(51303511-51303614)
chr3 (28-130)||(8914847-8914949)
chr3 (28-113)||(7546750-7546835)
chr3 (28-113)||(26275687-26275772)
chr3 (37-130)||(35175548-35175641)
chr3 (28-125)||(38545934-38546031)
chr3 (30-86)||(12050543-12050599)
chr3 (31-147)||(20987590-20987705)
chr3 (20-147)||(44959807-44959935)
chr3 (11-130)||(51923844-51923964)
chr3 (13-147)||(46220782-46220917)
chr3 (28-87)||(53099925-53099983)
chr3 (28-90)||(44805164-44805226)
chr3 (11-87)||(16235543-16235620)
chr3 (33-85)||(9173888-9173940)
chr3 (28-112)||(29922192-29922276)
chr3 (28-112)||(29971345-29971429)
chr3 (53-131)||(49552054-49552132)
chr3 (28-130)||(50194186-50194288)
chr3 (33-86)||(26739252-26739305)
chr3 (33-89)||(14859630-14859686)
chr3 (32-128)||(42455673-42455769)
chr3 (33-89)||(52115913-52115969)
chr3 (28-130)||(3848750-3848853)
chr3 (28-111)||(20464840-20464923)
chr3 (38-104)||(12149661-12149727)
chr3 (31-185)||(47896290-47896443)
chr3 (28-82)||(48199912-48199966)
chr3 (33-71)||(53508366-53508404)
chr3 (28-85)||(7792083-7792140)
chr3 (37-133)||(4821950-4822046)
chr3 (37-130)||(25162585-25162679)
chr3 (37-130)||(25631357-25631451)
chr3 (37-118)||(42719666-42719748)
chr3 (53-130)||(12116264-12116341)
chr3 (28-89)||(12946859-12946920)
chr3 (53-130)||(36906288-36906365)
chr3 (33-86)||(38142665-38142718)
chr3 (33-89)||(3085193-3085249)
[»] chr7 (55 HSPs)
chr7 (11-185)||(40993277-40993452)
chr7 (12-185)||(12141103-12141278)
chr7 (12-147)||(39171424-39171560)
chr7 (28-181)||(8001346-8001499)
chr7 (33-185)||(9977006-9977158)
chr7 (12-141)||(48316652-48316782)
chr7 (20-185)||(42978739-42978901)
chr7 (12-147)||(34899441-34899577)
chr7 (38-185)||(28407714-28407861)
chr7 (28-130)||(35664986-35665088)
chr7 (28-185)||(48061560-48061717)
chr7 (28-180)||(37837259-37837411)
chr7 (28-185)||(39328590-39328743)
chr7 (28-181)||(45349599-45349752)
chr7 (12-147)||(19404591-19404727)
chr7 (20-185)||(28044552-28044718)
chr7 (11-133)||(28476347-28476469)
chr7 (28-130)||(48930845-48930947)
chr7 (28-125)||(38798919-38799016)
chr7 (28-87)||(13796823-13796882)
chr7 (28-85)||(24069290-24069347)
chr7 (28-113)||(35133085-35133170)
chr7 (33-130)||(46822594-46822690)
chr7 (28-87)||(3398328-3398387)
chr7 (37-84)||(46244149-46244196)
chr7 (30-89)||(47590451-47590510)
chr7 (28-130)||(25255365-25255467)
chr7 (37-130)||(26492517-26492611)
chr7 (12-125)||(30756675-30756789)
chr7 (12-89)||(46700156-46700234)
chr7 (28-85)||(49148011-49148068)
chr7 (28-84)||(25287083-25287139)
chr7 (28-87)||(5348486-5348545)
chr7 (12-82)||(9450036-9450107)
chr7 (59-185)||(3222901-3223026)
chr7 (12-113)||(19296991-19297093)
chr7 (28-89)||(4999921-4999982)
chr7 (53-130)||(21266559-21266636)
chr7 (53-130)||(32684837-32684914)
chr7 (37-125)||(35261449-35261538)
chr7 (33-81)||(38880477-38880526)
chr7 (37-86)||(43369649-43369698)
chr7 (30-86)||(24770386-24770442)
chr7 (29-85)||(27341689-27341745)
chr7 (31-87)||(29617593-29617649)
chr7 (53-125)||(46822184-46822256)
chr7 (55-130)||(7640606-7640681)
chr7 (58-125)||(46339228-46339295)
chr7 (72-130)||(42408525-42408583)
chr7 (36-122)||(14046679-14046767)
chr7 (36-122)||(14356709-14356797)
chr7 (53-130)||(23425204-23425281)
chr7 (28-125)||(41553291-41553387)
chr7 (37-125)||(3861092-3861180)
chr7 (77-125)||(26610636-26610684)
[»] chr4 (71 HSPs)
chr4 (12-185)||(43510335-43510509)
chr4 (11-185)||(56040442-56040617)
chr4 (12-185)||(2520918-2521092)
chr4 (28-185)||(21686038-21686195)
chr4 (13-181)||(10496475-10496645)
chr4 (20-185)||(32766661-32766827)
chr4 (28-136)||(47320257-47320365)
chr4 (12-185)||(19853308-19853482)
chr4 (28-141)||(29960789-29960902)
chr4 (24-113)||(36161863-36161952)
chr4 (12-130)||(22611322-22611441)
chr4 (28-125)||(11299866-11299963)
chr4 (28-89)||(45418668-45418729)
chr4 (28-130)||(6155071-6155176)
chr4 (29-147)||(35348464-35348582)
chr4 (28-125)||(9714066-9714163)
chr4 (29-185)||(17949119-17949276)
chr4 (29-185)||(17952971-17953128)
chr4 (29-86)||(22305516-22305573)
chr4 (31-84)||(29120276-29120329)
chr4 (28-89)||(37465638-37465699)
chr4 (20-147)||(24098903-24099029)
chr4 (12-87)||(33921193-33921269)
chr4 (29-125)||(43095785-43095881)
chr4 (12-130)||(53811167-53811285)
chr4 (38-180)||(48257433-48257575)
chr4 (28-130)||(53444274-53444376)
chr4 (28-86)||(54022016-54022073)
chr4 (11-87)||(22806674-22806751)
chr4 (28-113)||(36194864-36194949)
chr4 (16-112)||(44596803-44596900)
chr4 (38-86)||(9178519-9178567)
chr4 (30-130)||(12199545-12199644)
chr4 (12-147)||(21662576-21662712)
chr4 (12-147)||(21671340-21671476)
chr4 (13-87)||(52978884-52978959)
chr4 (20-185)||(13634262-13634428)
chr4 (31-85)||(28514935-28514989)
chr4 (28-130)||(31891138-31891240)
chr4 (33-87)||(43853604-43853658)
chr4 (53-130)||(2115419-2115496)
chr4 (13-89)||(18935922-18935999)
chr4 (53-130)||(21090323-21090400)
chr4 (28-185)||(26633467-26633624)
chr4 (31-87)||(36184690-36184746)
chr4 (37-131)||(51318149-51318244)
chr4 (28-131)||(56156492-56156595)
chr4 (28-130)||(28857557-28857659)
chr4 (20-105)||(37030408-37030494)
chr4 (37-130)||(38706541-38706635)
chr4 (37-130)||(44947576-44947670)
chr4 (28-86)||(52933844-52933902)
chr4 (96-185)||(4142560-4142649)
chr4 (53-130)||(20569438-20569515)
chr4 (53-130)||(47417843-47417920)
chr4 (26-75)||(55228132-55228181)
chr4 (37-125)||(9048829-9048917)
chr4 (37-133)||(21554638-21554734)
chr4 (12-87)||(52944450-52944526)
chr4 (28-75)||(10258802-10258849)
chr4 (11-86)||(42032424-42032499)
chr4 (11-104)||(2069458-2069551)
chr4 (12-130)||(26090761-26090884)
chr4 (28-130)||(36204230-36204332)
chr4 (37-130)||(49410387-49410481)
chr4 (37-82)||(4821080-4821125)
chr4 (28-85)||(7008885-7008942)
chr4 (28-85)||(51888107-51888164)
chr4 (53-130)||(53616481-53616558)
chr4 (53-125)||(9645360-9645432)
chr4 (20-75)||(36700423-36700479)
[»] chr2 (68 HSPs)
chr2 (11-185)||(4903942-4904117)
chr2 (12-185)||(4778882-4779056)
chr2 (12-185)||(7646607-7646781)
chr2 (20-185)||(25508865-25509031)
chr2 (20-185)||(38445303-38445469)
chr2 (13-185)||(37876403-37876576)
chr2 (13-185)||(29173514-29173690)
chr2 (28-185)||(31788602-31788759)
chr2 (28-130)||(41694767-41694868)
chr2 (28-185)||(5427666-5427823)
chr2 (28-185)||(18763614-18763771)
chr2 (28-185)||(33923851-33924008)
chr2 (28-136)||(17248993-17249101)
chr2 (53-185)||(35220499-35220631)
chr2 (31-125)||(12554038-12554132)
chr2 (13-185)||(7677670-7677843)
chr2 (28-121)||(30399890-30399983)
chr2 (12-147)||(1421805-1421940)
chr2 (28-122)||(37994430-37994524)
chr2 (28-125)||(8809426-8809522)
chr2 (33-130)||(10237068-10237165)
chr2 (20-141)||(4100473-4100594)
chr2 (12-113)||(9169127-9169229)
chr2 (28-185)||(1415703-1415860)
chr2 (28-181)||(11985034-11985187)
chr2 (28-185)||(12677248-12677404)
chr2 (36-125)||(28533811-28533900)
chr2 (38-147)||(33585570-33585679)
chr2 (28-185)||(36692020-36692177)
chr2 (20-147)||(27097242-27097370)
chr2 (33-120)||(14955680-14955767)
chr2 (16-147)||(17994561-17994697)
chr2 (28-147)||(29279405-29279524)
chr2 (28-118)||(37416856-37416946)
chr2 (28-130)||(43396971-43397072)
chr2 (28-89)||(6358774-6358835)
chr2 (11-130)||(3309073-3309193)
chr2 (11-86)||(18107646-18107722)
chr2 (11-141)||(19028755-19028886)
chr2 (28-130)||(24461589-24461691)
chr2 (28-130)||(33760045-33760147)
chr2 (20-185)||(36942919-36943084)
chr2 (28-185)||(10929811-10929967)
chr2 (28-89)||(23933512-23933573)
chr2 (13-131)||(19062198-19062322)
chr2 (31-87)||(34128579-34128635)
chr2 (12-74)||(4264601-4264664)
chr2 (28-130)||(20046913-20047016)
chr2 (41-120)||(32448478-32448557)
chr2 (37-130)||(9986173-9986267)
chr2 (28-85)||(14416307-14416364)
chr2 (33-111)||(14423476-14423558)
chr2 (54-130)||(84012-84088)
chr2 (61-125)||(280977-281041)
chr2 (39-147)||(4041429-4041537)
chr2 (20-86)||(17151561-17151628)
chr2 (12-70)||(31128692-31128751)
chr2 (37-80)||(33140582-33140625)
chr2 (15-61)||(39310774-39310821)
chr2 (37-130)||(8806022-8806116)
chr2 (37-87)||(10548342-10548392)
chr2 (37-130)||(21570239-21570333)
chr2 (28-86)||(22538203-22538261)
chr2 (53-130)||(4228296-4228373)
chr2 (13-65)||(31210524-31210577)
chr2 (53-130)||(31580486-31580563)
chr2 (37-113)||(16376094-16376170)
chr2 (41-85)||(41327898-41327942)
[»] chr6 (49 HSPs)
chr6 (12-185)||(33052964-33053138)
chr6 (38-185)||(9341447-9341594)
chr6 (38-146)||(67836-67944)
chr6 (12-147)||(23128738-23128874)
chr6 (11-181)||(3913374-3913545)
chr6 (12-130)||(20225971-20226090)
chr6 (12-130)||(22119955-22120074)
chr6 (20-185)||(606332-606498)
chr6 (20-185)||(29255242-29255408)
chr6 (33-130)||(546173-546270)
chr6 (33-130)||(8102868-8102965)
chr6 (28-185)||(14174867-14175024)
chr6 (28-185)||(14179403-14179560)
chr6 (12-185)||(12170588-12170762)
chr6 (11-130)||(30776782-30776902)
chr6 (28-130)||(14801964-14802067)
chr6 (28-185)||(32327016-32327170)
chr6 (45-185)||(21426482-21426622)
chr6 (12-125)||(127789-127901)
chr6 (11-89)||(1523527-1523606)
chr6 (11-181)||(30894719-30894888)
chr6 (28-125)||(1933548-1933645)
chr6 (28-185)||(7514999-7515155)
chr6 (28-185)||(31296957-31297113)
chr6 (28-125)||(32802683-32802780)
chr6 (20-87)||(30608409-30608477)
chr6 (28-146)||(29319712-29319831)
chr6 (28-130)||(29743134-29743239)
chr6 (28-82)||(528249-528303)
chr6 (28-125)||(10228822-10228920)
chr6 (28-82)||(13546600-13546654)
chr6 (12-185)||(34018680-34018854)
chr6 (12-180)||(7975989-7976157)
chr6 (11-87)||(9380142-9380219)
chr6 (28-89)||(14846113-14846174)
chr6 (12-130)||(30493652-30493771)
chr6 (53-130)||(8497137-8497214)
chr6 (53-130)||(25064405-25064482)
chr6 (33-130)||(28981319-28981416)
chr6 (45-181)||(32060030-32060166)
chr6 (55-131)||(33740408-33740484)
chr6 (37-130)||(4984398-4984492)
chr6 (37-130)||(12059604-12059698)
chr6 (37-130)||(17237117-17237211)
chr6 (37-87)||(30879612-30879662)
chr6 (28-70)||(34185604-34185646)
chr6 (53-130)||(17334922-17334999)
chr6 (28-125)||(27097498-27097595)
chr6 (33-133)||(679251-679350)
[»] chr5 (46 HSPs)
chr5 (12-185)||(13007347-13007521)
chr5 (12-185)||(9113521-9113695)
chr5 (12-181)||(38597915-38598085)
chr5 (28-185)||(8088009-8088165)
chr5 (13-185)||(10722880-10723053)
chr5 (28-185)||(24229580-24229737)
chr5 (11-182)||(26877908-26878079)
chr5 (12-147)||(34945511-34945647)
chr5 (28-146)||(26825565-26825683)
chr5 (28-185)||(14726257-14726414)
chr5 (12-130)||(25980276-25980394)
chr5 (28-185)||(38007493-38007649)
chr5 (12-185)||(13422051-13422224)
chr5 (11-111)||(41630619-41630720)
chr5 (12-147)||(14082230-14082366)
chr5 (28-147)||(11976769-11976888)
chr5 (12-185)||(6011934-6012108)
chr5 (33-130)||(10332398-10332495)
chr5 (28-125)||(37985969-37986066)
chr5 (11-130)||(28540757-28540877)
chr5 (12-181)||(6217016-6217186)
chr5 (31-114)||(11867787-11867870)
chr5 (28-146)||(35850934-35851050)
chr5 (28-89)||(39567405-39567466)
chr5 (11-130)||(14211344-14211464)
chr5 (38-124)||(7886776-7886862)
chr5 (37-130)||(20257527-20257621)
chr5 (28-113)||(2979174-2979259)
chr5 (28-141)||(8096338-8096451)
chr5 (28-130)||(7247104-7247207)
chr5 (62-125)||(24874698-24874761)
chr5 (28-87)||(31391647-31391706)
chr5 (37-130)||(7241938-7242032)
chr5 (32-74)||(7930316-7930358)
chr5 (39-85)||(11192525-11192571)
chr5 (37-130)||(27266690-27266784)
chr5 (36-82)||(35920895-35920941)
chr5 (37-85)||(8514548-8514596)
chr5 (13-87)||(7036338-7036413)
chr5 (38-85)||(13468753-13468800)
chr5 (37-84)||(38711838-38711885)
chr5 (37-130)||(3271233-3271327)
chr5 (28-185)||(15571621-15571778)
chr5 (28-125)||(19121047-19121144)
chr5 (39-88)||(38961573-38961622)
chr5 (57-130)||(41184271-41184344)
[»] chr8 (60 HSPs)
chr8 (12-185)||(7883035-7883209)
chr8 (28-137)||(15344446-15344555)
chr8 (28-137)||(15433511-15433620)
chr8 (28-137)||(15524815-15524924)
chr8 (33-185)||(28086606-28086758)
chr8 (12-182)||(23230764-23230935)
chr8 (12-185)||(31013402-31013576)
chr8 (11-113)||(18890565-18890668)
chr8 (31-185)||(9637203-9637357)
chr8 (28-185)||(45445605-45445762)
chr8 (28-136)||(1236540-1236648)
chr8 (20-147)||(16928589-16928717)
chr8 (29-185)||(30568115-30568271)
chr8 (28-133)||(8867943-8868051)
chr8 (28-141)||(7677121-7677234)
chr8 (28-133)||(41896655-41896760)
chr8 (28-119)||(27110325-27110416)
chr8 (29-147)||(25190897-25191015)
chr8 (28-89)||(5046891-5046952)
chr8 (13-125)||(41060117-41060230)
chr8 (12-130)||(10377810-10377929)
chr8 (13-147)||(24186493-24186628)
chr8 (30-185)||(40618867-40619022)
chr8 (28-130)||(14585815-14585917)
chr8 (13-130)||(33347370-33347488)
chr8 (28-130)||(43833845-43833947)
chr8 (28-113)||(37971421-37971506)
chr8 (28-136)||(7198038-7198146)
chr8 (12-185)||(17693407-17693582)
chr8 (12-86)||(20553134-20553209)
chr8 (12-89)||(16247113-16247191)
chr8 (28-85)||(29617168-29617225)
chr8 (33-125)||(14916042-14916134)
chr8 (11-130)||(42046341-42046461)
chr8 (33-89)||(471054-471112)
chr8 (12-86)||(20559637-20559712)
chr8 (12-86)||(20571199-20571274)
chr8 (12-185)||(3673562-3673736)
chr8 (28-86)||(34493140-34493198)
chr8 (28-89)||(1239287-1239348)
chr8 (29-110)||(28897848-28897929)
chr8 (28-85)||(29939438-29939495)
chr8 (13-64)||(41684504-41684556)
chr8 (37-130)||(14906754-14906848)
chr8 (20-89)||(27498256-27498326)
chr8 (56-130)||(29777398-29777472)
chr8 (29-130)||(33214520-33214621)
chr8 (12-185)||(40211094-40211270)
chr8 (11-74)||(39657574-39657638)
chr8 (31-86)||(428984-429039)
chr8 (31-86)||(35283256-35283311)
chr8 (37-130)||(11267167-11267261)
chr8 (28-70)||(26469055-26469097)
chr8 (53-130)||(9498430-9498507)
chr8 (53-130)||(11725856-11725933)
chr8 (37-86)||(25238486-25238535)
chr8 (28-89)||(39646078-39646139)
chr8 (37-125)||(44578189-44578278)
chr8 (38-86)||(8826359-8826407)
chr8 (37-81)||(14913235-14913279)
[»] chr1 (68 HSPs)
chr1 (20-185)||(11462278-11462444)
chr1 (28-185)||(50377462-50377619)
chr1 (28-185)||(4413253-4413410)
chr1 (28-185)||(34878074-34878231)
chr1 (28-136)||(24583089-24583197)
chr1 (28-136)||(44543411-44543519)
chr1 (28-147)||(15431500-15431619)
chr1 (28-125)||(7836652-7836749)
chr1 (32-185)||(21687521-21687674)
chr1 (28-136)||(24583285-24583393)
chr1 (12-147)||(31984283-31984419)
chr1 (12-147)||(45415680-45415816)
chr1 (12-89)||(5983958-5984036)
chr1 (28-185)||(16989510-16989667)
chr1 (13-185)||(32395121-32395293)
chr1 (32-181)||(44915782-44915931)
chr1 (28-136)||(19061048-19061156)
chr1 (11-130)||(34412943-34413063)
chr1 (28-90)||(14489411-14489473)
chr1 (12-113)||(14872761-14872863)
chr1 (28-125)||(9341865-9341962)
chr1 (28-124)||(18939458-18939555)
chr1 (28-181)||(21947418-21947571)
chr1 (38-147)||(31919138-31919247)
chr1 (13-181)||(35484191-35484360)
chr1 (28-89)||(51373750-51373811)
chr1 (38-130)||(19596311-19596403)
chr1 (28-130)||(36775561-36775663)
chr1 (28-130)||(48750324-48750426)
chr1 (52-125)||(27456647-27456720)
chr1 (28-185)||(47133042-47133198)
chr1 (33-89)||(3228413-3228469)
chr1 (11-130)||(10776312-10776432)
chr1 (37-185)||(12635318-12635465)
chr1 (33-125)||(16161972-16162064)
chr1 (12-147)||(29738498-29738634)
chr1 (28-130)||(25406115-25406218)
chr1 (19-185)||(39888311-39888478)
chr1 (38-185)||(49504391-49504538)
chr1 (28-130)||(51872010-51872113)
chr1 (28-142)||(13144651-13144765)
chr1 (12-125)||(31317858-31317972)
chr1 (26-87)||(6217717-6217778)
chr1 (37-125)||(19723469-19723558)
chr1 (12-147)||(7337497-7337633)
chr1 (28-104)||(23291519-23291595)
chr1 (29-89)||(45789681-45789741)
chr1 (37-87)||(4397115-4397165)
chr1 (37-130)||(9687036-9687130)
chr1 (37-130)||(51868476-51868570)
chr1 (48-133)||(5600924-5601009)
chr1 (12-76)||(8211816-8211881)
chr1 (68-185)||(26535515-26535632)
chr1 (28-113)||(27579996-27580081)
chr1 (28-113)||(34529213-34529298)
chr1 (12-73)||(51916575-51916635)
chr1 (28-104)||(25564137-25564213)
chr1 (33-125)||(37720005-37720097)
chr1 (28-83)||(15492426-15492481)
chr1 (28-115)||(32679007-32679094)
chr1 (28-130)||(50165930-50166033)
chr1 (53-130)||(5701432-5701509)
chr1 (53-130)||(7997962-7998039)
chr1 (53-130)||(31837007-31837084)
chr1 (53-125)||(7311942-7312014)
chr1 (31-75)||(28053623-28053667)
chr1 (11-82)||(32873763-32873835)
chr1 (29-85)||(41740515-41740571)
[»] scaffold0121 (1 HSPs)
scaffold0121 (12-181)||(31074-31244)
[»] scaffold0884 (1 HSPs)
scaffold0884 (16-184)||(1770-1939)
[»] scaffold0049 (1 HSPs)
scaffold0049 (12-143)||(71138-71270)
[»] scaffold0017 (1 HSPs)
scaffold0017 (12-147)||(32581-32717)
[»] scaffold0026 (1 HSPs)
scaffold0026 (28-147)||(71704-71823)
[»] scaffold0127 (1 HSPs)
scaffold0127 (12-185)||(15611-15785)
[»] scaffold0050 (1 HSPs)
scaffold0050 (12-185)||(65838-66012)
[»] scaffold0009 (1 HSPs)
scaffold0009 (28-185)||(57885-58041)
[»] scaffold0088 (1 HSPs)
scaffold0088 (12-113)||(50895-50997)
[»] scaffold0445 (1 HSPs)
scaffold0445 (28-147)||(1480-1599)
[»] scaffold0136 (3 HSPs)
scaffold0136 (38-141)||(9882-9985)
scaffold0136 (20-125)||(38183-38288)
scaffold0136 (37-115)||(34628-34706)
[»] scaffold0495 (1 HSPs)
scaffold0495 (28-125)||(5541-5639)
[»] scaffold0128 (1 HSPs)
scaffold0128 (12-88)||(36944-37021)
[»] scaffold0039 (1 HSPs)
scaffold0039 (28-125)||(93243-93340)
[»] scaffold0262 (1 HSPs)
scaffold0262 (12-75)||(1725-1789)
[»] scaffold0888 (1 HSPs)
scaffold0888 (28-82)||(1577-1631)
[»] scaffold0634 (1 HSPs)
scaffold0634 (38-104)||(8658-8724)
[»] scaffold0219 (1 HSPs)
scaffold0219 (21-120)||(14732-14831)
[»] scaffold0603 (1 HSPs)
scaffold0603 (39-133)||(7862-7957)
[»] scaffold0347 (1 HSPs)
scaffold0347 (28-121)||(6166-6259)
[»] scaffold0021 (1 HSPs)
scaffold0021 (33-81)||(4313-4361)


Alignment Details
Target: chr3 (Bit Score: 159; Significance: 7e-85; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 19339293 - 19339467
Alignment:
Q  11 agaagcataggtatttcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19339293 agaagcatgggtatttcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 19339392  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19339393 tcatcttttacgtttgtagtgatctttgtatttgatgaattgaatcaatctaaatgaatgaatatcgttttgttt 19339467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 21533779 - 21533605
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||||||| || | ||||||||| |||||    
T  21533779 gaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagat 21533680  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    | | ||||||||||| |||| || ||||||| ||||| | |  ||| || | || ||||||||||| ||||||||    
T  21533679 ttaccttttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcattttgttt 21533605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 9998584 - 9998755
Alignment:
Q  11 agaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| ||||||||| |||||||  |||||||||||||| ||||||||||||| ||||||||| ||||||||||||| || | |||||||||  |||    
T  9998584 agaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtaga 9998683  T
Q  110 ttcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    |||| | ||||||||| |||| || ||||||||||||| | |  ||| || | || ||||||||||||||||    
T  9998684 ttcaccctttacgtttttagctatgtttgtatttgatgtactctatcgatttgaatgaatgaatatcgtttt 9998755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 52923087 - 52922913
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||  |||||||||||||| ||||||||||||  ||||||||| ||||||||||| | || | ||||||||| |||||    
T  52923087 gaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttaccgttgtatgctattaacttggctgctgtgagtttgttcgcagat 52922988  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||||||| |||| || ||||||||||||| | |  ||| || | || ||||||||||||||||||||    
T  52922987 tcaccctttacgtttttagcgatgtttgtatttgatgtactctatcgatttgaatgaatgaatatcgttttgttt 52922913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 46304490 - 46304317
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||| |||||||||||||| ||||||||| ||| ||||||||| |||||||||| ||  | | ||||||||| |||||    
T  46304490 gaagcatgggtatttcggtgacttaggttttatcatattatatgtaggcatgttgccgttgtatgctattaacttgagtgttgtgagtttgttcgcagat 46304391  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||||||| |||| || ||||||| ||||| | |  |||||| | || ||||||||||||||||||||    
T  46304390 tcaccctttacgtttttagc-atgtttgtatctgatgtactctatcaatttgaatgaatgaatatcgttttgttt 46304317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 18011155 - 18011300
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||||| | |||||||||| |||||| || |||  |||||||| || ||| |||||| |||||||||||||| |||||||||||||||||||| |    
T  18011155 gtgacttagatataatcatattatttgtaggtatcttgcggttgtatgctactaatttgggttctttaagtttgttcgcagattcatcttttacgttttt 18011254  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaat 173  Q
    ||| ||||||||||   ||| |||| |||||||| || ||||||||    
T  18011255 agcgatctttgtatccaatgcattggatcaatctgaatgaatgaat 18011300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 21313171 - 21313328
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||||||| || | |||||||||  ||||||| | ||||| ||| |    
T  21313171 gtgacttagattttatcatattatttgtagccattttgccgttgtatgctattaacttgggtgctgtgagtttgttcggagattcaccctttacattttt 21313270  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||  | ||||||| ||||  | | ||||||| | || ||||||||||||||||||||    
T  21313271 agcggtgtttgtatctgatatactcaatcaatttgaatgaatgaatatcgttttgttt 21313328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 38 - 181
Target Start/End: Original strand, 10108381 - 10108524
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatcttt 137  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||||||||| || | |||||||||  ||||||| | ||||||||| |||| || |||    
T  10108381 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagctatgttt 10108480  T
Q  138 gtatttgatgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    |||||||||| | |  ||| || | || ||||||||||||||||    
T  10108481 gtatttgatgtactctatcgatttgaatgaatgaatatcgtttt 10108524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 6954666 - 6954492
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||  |||||||| ||||| ||||||||||||| ||||||||| ||||||||||||| || | ||||||||  |||||    
T  6954666 gaagcatgggtatttcggtgacttatgttttatcaaattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagat 6954567  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||||||| |||| || ||||||| ||| | | |  ||| || | || ||||||||||||||||||||    
T  6954566 tcaccctttacgtttttagcgatgtttgtatctgaagtactctatcgatttgaatgaatgaatatcgttttgttt 6954492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 10229611 - 10229729
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||  |||||||||||||| ||||||||||||| ||||||||| ||||||||||||| || | |||||||||  ||||||| | ||||||||| |    
T  10229611 gtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgttttt 10229710  T
Q  128 agcaatctttgtatttgat 146  Q
    ||| || ||||||||||||    
T  10229711 agctatgtttgtatttgat 10229729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 40487443 - 40487617
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||| |||| ||||||||||||||||||  | | ||||||||| || ||    
T  40487443 gaagcataggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttatatgttattaacttgggtgttgtgagtttgttcgcaaat 40487542  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||   |||| |||| |||| || ||||||| ||||  | |  ||| || | || ||||||||||||||||||||    
T  40487543 tcactctttatgtttttagcgatgtttgtatctgatatactctatcgatttgaatgaatgaatatcgttttgttt 40487617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 42460884 - 42460986
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| | ||||||||| |||||||| | ||||| ||| |    
T  42460884 gtgatttagattttatcatattatttgtaggcattttgttgttgtatgctattaacttgggtactgtgagtttgttcgcagattcaccctttacatttat 42460983  T
Q  128 agc 130  Q
    |||    
T  42460984 agc 42460986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 628876 - 628720
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||| ||||||||||| ||||||||||||| ||||||||  |||||||||||||  | | ||||||||| |||||||||| ||||||||| |    
T  628876 gtgatttagattatatcatattatttgtaggcattttgccgttgtattctattaacttgggtgttgtgagtttgttcgcagattcatcctttacgttttt 628777  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| ||| |||  ||||||| |||  |||||| | || ||||||||||| ||||||||    
T  628776 agcgatc-ttgattttgatgtattctatcaatttgaatgaatgaatatcattttgttt 628720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 37040904 - 37041060
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||||||| |||||||||  ||||| ||||||||| || |||||||||||||||||| || | ||||||||| ||| || | | ||||||||| |    
T  37040904 gtgacttagatttaatcatattagttgtag-cattttgtcattttatgttattaacttgggtgctgtgagtttgttcgcagttttaccctttacgtttct 37041002  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||| | |  |||||||| || ||||||||||||||||||||    
T  37041003 agcgatttttgtatctgatgtactctatcaatctgaatgaatgaatatcgttttgttt 37041060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 45568398 - 45568241
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||| |||||||||||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||| ||| |||||||| | ||||||||| |    
T  45568398 gtgatttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttattcgcagattcaccctttacgttttt 45568299  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  45568298 agcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 45568241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 53807811 - 53807703
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||| |||||||||| ||||||||| |    
T  53807811 gtgatttagattatatcatattatttgtaggcattttgccgttgtatgctattaacttgggtggtgtgagtttgttcgcagattcatcctttacgttttt 53807712  T
Q  128 agcaatctt 136  Q
    ||| |||||    
T  53807711 agcgatctt 53807703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 21431731 - 21431850
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||  |||||||||||||| ||||||||||||| ||||||||| ||||||||||||| || | || |||||| |||||    
T  21431731 gaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgatattaacttgggtgctgtgagattgttcgcagat 21431830  T
Q  111 tcatcttttacgtttgtagc 130  Q
    ||| | ||||||||| ||||    
T  21431831 tcaccatttacgtttttagc 21431850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 43017023 - 43017180
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| | |||||||||||| ||||||||||||| ||||||||| ||||||||| |||  | | ||||| ||| || ||||||| ||||||||| |    
T  43017023 gtgacttaggtgttatcatattatttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttattcacatattcatcctttacgttttt 43017122  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  43017123 agcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 43017180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 47042001 - 47041844
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| ||| |||||||||| ||||||| |||| ||||| |||| ||||||||| |||  | | ||||||||| |||||||| ||||||||||| |    
T  47042001 gtgacttaggtttcatcatattatttgtaggcgttttatcgttttatgctattaacttaggtgatatgagtttgttcgcagattcaccttttacgttttt 47041902  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||||| ||||||| ||||| | |  ||| || | || ||||||||||| ||||||||    
T  47041901 agcaatgtttgtatctgatgtaatctatctatttgaatgaatgaatatcattttgttt 47041844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 48650687 - 48650530
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||  |||||||||||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||| |||||||| | ||||| ||| |    
T  48650687 gtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacattttt 48650588  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||| | |  ||| || | || ||||||||||| ||||||||    
T  48650587 agcgatatttgtatctgatgtactctatcgatttgaatgaatgaatatcattttgttt 48650530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 4711600 - 4711736
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||  |||||||||||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||  |||||    
T  4711600 gaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgtttgcagat 4711699  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    ||||| |||| |||| |||  || ||||||| |||||    
T  4711700 tcatcctttatgtttttagtgatgtttgtatctgatg 4711736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 23799862 - 23799802
Alignment:
Q  29 tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  23799862 tgacttagattttatcatattatttgtaggcattttgccgttgtatgttattaacttgggt 23799802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 9797477 - 9797330
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatcttt 137  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||| || | ||||||||   | ||||| | ||||||||  |||| || |||    
T  9797477 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgtttgtatattcaccctttacgttcttagcgatgttt 9797378  T
Q  138 gtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  9797377 gtatctgatgtactatatcgatttgaatgaatgaatatcgttttgttt 9797330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 27706174 - 27706095
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattc 112  Q
    |||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||| || | ||||||||| |||||||    
T  27706174 ttagatttcatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgttagtttgttcccagattc 27706095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 19619848 - 19619950
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||  | |  ||| |||||| || |||||||||| ||||||||| |    
T  19619848 gtgacttagattttatcatattatttgtaggcattttgccgttgtatgctattaactaagatgttttgagtttgatcgcagattcatcatttacgttttt 19619947  T
Q  128 agc 130  Q
    |||    
T  19619948 agc 19619950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 27856300 - 27856402
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||||||||||||||| ||||||||||||  ||||| ||| ||||||||||| |  | | ||||||||| |||||||||||||||||||| |    
T  27856300 gtgatttagattttatcatattatttgtaggcatttttccgttgcatgctattaacttggatgatgtgagtttgttcgcagattcatcttttacgttttt 27856399  T
Q  128 agc 130  Q
    |||    
T  27856400 agc 27856402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 38860065 - 38859979
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcat 114  Q
    ||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||| |||||||||    
T  38860065 gtgacttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcat 38859979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 43488560 - 43488387
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  |||||||| ||| |||| |||||||||||||| | ||||| ||||| ||||||||| |||||| |||||| || | ||||||||| |||||    
T  43488560 gaagcatgagtatttcggtgatttaggttttatcatattatttttaggctttttgccgttgtatgctattaatttgggtgctgtgagtttgttcgcagat 43488461  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||||| ||||||||| |||| || ||||||| | ||| | |  ||| || | || ||||||||||||||||||||    
T  43488460 tcatcatttacgttt-tagcgatgtttgtatctaatgtactctatcgatttgaatgaatgaatatcgttttgttt 43488387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 10233205 - 10233358
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||  |||||||||||||| ||||||||||||| ||||||||| ||||||||||||| || | |||||||||  | ||||| | |||| |||| |    
T  10233205 gtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtacattcaccctttatgttttt 10233304  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    | | || ||||||||||||| | |  ||| || | || ||||||||||||||||    
T  10233305 atctatgtttgtatttgatgtactctatcgatttgaatgaatgaatatcgtttt 10233358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 33 - 130
Target Start/End: Complemental strand, 21289762 - 21289665
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||| |||||||||| ||||||||||||| ||||||||| ||||||||||||| || | ||||||||| |||||||| | | ||||||| ||||    
T  21289762 ttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacgtttttagc 21289665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 33580015 - 33580172
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||| |||||||||||||| ||||||||||||| |||| |||| |||||||||||||  | | | ||||||| |||||||| | ||||||||| |    
T  33580015 gtgatttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgattttgttcgcagattcaccctttacgttttt 33580114  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||  || ||||||||||||| | |  ||| || | || ||||||||||||| ||||||    
T  33580115 agtgatgtttgtatttgatgtaatctatcgatttgaatgaatgaatatcgtcttgttt 33580172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 40556837 - 40556994
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||  |||||||||||||| ||||||||||||| ||||||||| |||  ||||||||  | | ||||||||| |||||||| | |||| |||| |    
T  40556837 gtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctatgcacttgggtgttgtgagtttgttcgcagattcaccctttatgttttt 40556936  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||||||||| | |   || || | || ||||||||||||||||||||    
T  40556937 agcgatgtttgtatttgatgtactatgtcgatttgaatgaatgaatatcgttttgttt 40556994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 54149109 - 54149278
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| | ||||||| |||||| |||||||||||||||| |||||||||| |||||||||||| ||||||| |||||  | | |||| |||| ||| |    
T  54149109 gaagcatggctatttcggtgacttggattttatcatattatttgtaggcattatgtcgttgtatgctattaacctgggtgatgtgagttagttcgcaggt 54149208  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttt 180  Q
    ||| | ||||||||| |||| || ||||||| ||||| | |  ||| || | || |||||||||||||||    
T  54149209 tcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 54149278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 32701609 - 32701745
Alignment:
Q  12 gaagcataggtatttcgt-gacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| |||||||||  ||||||  |||||| ||||||||||||||||||||| ||||||||| ||| ||||||| | || | ||||||||| |||||    
T  32701609 gaagcatgggtatttcggcgacttaagttttatgatattatctgtaggcattttgccgttgtatgctatgaacttggatgctgtgagtttgttcgcagat 32701708  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    ||| ||||||  ||| |||| || ||||||| |||||    
T  32701709 tcaccttttatatttttagcgatgtttgtatctgatg 32701745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 51303614 - 51303511
Alignment:
Q  11 agaagcataggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| |||||| | |||| |||||||| |||||||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||| ||||    
T  51303614 agaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaga 51303515  T
Q  110 ttca 113  Q
    ||||    
T  51303514 ttca 51303511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 8914847 - 8914949
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||||||| |||||||||| ||||||||||||| ||||||||| |||||||||| ||  | | ||||||||| |||||||| ||| ||||||| |    
T  8914847 gtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgagtgatgtgagtttgttcgcagattcaccttatacgttttt 8914946  T
Q  128 agc 130  Q
    |||    
T  8914947 agc 8914949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 7546750 - 7546835
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattca 113  Q
    |||| |||||||| |||||||||| ||||||||||||| ||||||||| ||||||||||||| || | ||||||||  ||||||||    
T  7546750 gtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattca 7546835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 26275772 - 26275687
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattca 113  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||| ||||||||| ||  |||||||||| ||| || |||||    
T  26275772 gtgacttatattttatcatattatttgtaggcattttgtcattgtatgctattaactttggcgctttaagtttattcgcaaattca 26275687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 35175548 - 35175641
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||| |||||||| | ||||||||||||||| ||||||| |||||||||| ||  | | ||||||||| |||||||||||||||||||| ||||    
T  35175548 atttcatcatattgtttgtaggcattttgtcattgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcttttacgtttttagc 35175641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 38545934 - 38546031
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    ||||||||| |||||||||||||| ||||||||||||| |||| |||| |||||||||||||  |   ||||||||| |||||||| | |||||||||    
T  38545934 gtgacttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtggtgggagtttgttcccagattcaccctttacgttt 38546031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 12050599 - 12050543
Alignment:
Q  30 gacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    ||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||    
T  12050599 gacttaggttttatcatattatttgtaagcattttgtcgttgtatgttattaacttg 12050543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 20987705 - 20987590
Alignment:
Q  31 acttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    ||||||||||||||||||||| |||||||||||||  |||||||| ||||||||||| |  | | |||||||||  ||||||||| ||||||| | ||||    
T  20987705 acttagattttatcatattatttgtaggcattttgcagttgtatgctattaacttggatgatgtgagtttgttcgtagattcatc-tttacgtctttagc 20987607  T
Q  131 aatctttgtatttgatg 147  Q
     || | |||||||||||    
T  20987606 gatgtctgtatttgatg 20987590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 44959935 - 44959807
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    ||||||||| |||||||  |||||||||||||| ||||||||||||| | ||||||| ||||||||||| | || | ||||| ||  |||||||| | ||    
T  44959935 ggtatttcggtgacttaagttttatcatattatttgtaggcattttgccattgtatgctattaacttggatgctgtgagtttatttgcagattcaccctt 44959836  T
Q  119 tacgtttgtagcaatctttgtatttgatg 147  Q
    ||||||| |||| || ||||||| |||||    
T  44959835 tacgtttttagcgatgtttgtatctgatg 44959807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 51923844 - 51923964
Alignment:
Q  11 agaagcataggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| |||||| | |||| |||||||| |||||||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||| || |    
T  51923844 agaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcata 51923943  T
Q  110 ttcatcttttacgtttgtagc 130  Q
    | |||| | ||||||| ||||    
T  51923944 tccatcctatacgtttttagc 51923964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 147
Target Start/End: Original strand, 46220782 - 46220917
Alignment:
Q  13 aagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagatt 111  Q
    |||||| |||||||| |||| ||||||||||||||||||| ||||||||||||  |||||||||  ||||| |||||| ||   ||||||||| || |||    
T  46220782 aagcattggtatttcagtgatttagattttatcatattatttgtaggcattttaccgttgtatgccattaatttgggtgctgcgagtttgttcgcaaatt 46220881  T
Q  112 catcttttacgtttgtagcaatctttgtatttgatg 147  Q
      |||||||  ||| |||| || |||||||||||||    
T  46220882 tttcttttatatttttagcgatatttgtatttgatg 46220917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 53099925 - 53099983
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||    
T  53099925 gtgacttagattttagcatattatttgtag-cattttgtcgttgtatgttattaacttgg 53099983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 44805164 - 44805226
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggta 90  Q
    |||| ||||||||||||||||| | ||||||||||||||| ||||||| ||||||||||||||    
T  44805164 gtgatttagattttatcatattgtttgtaggcattttgtcattgtatgctattaacttgggta 44805226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 16235543 - 16235620
Alignment:
Q  11 agaagcataggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    |||||||| |||||| | |||| |||||||| |||||||||  ||||||||||||||||||||||| |||||||||||    
T  16235543 agaagcatgggtattctggtgatttagatttcatcatattacttgtaggcattttgtcgttgtatgctattaacttgg 16235620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 9173888 - 9173940
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||||||||    
T  9173888 ttagatttgatcatattatttgtaggcattttgccgttgtatgttattaactt 9173940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 29922192 - 29922276
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattc 112  Q
    |||| ||||||||||||||||| | ||||||||||||| ||||||||| |||||||||||  | | | ||||||||| |||||||    
T  29922192 gtgatttagattttatcatattgtttgtaggcattttgccgttgtatgctattaacttggaaaatgtgagtttgttcgcagattc 29922276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 29971345 - 29971429
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattc 112  Q
    |||| ||||||||||||||||| | ||||||||||||| ||||||||| |||||||||||  | | | ||||||||| |||||||    
T  29971345 gtgatttagattttatcatattgtttgtaggcattttgccgttgtatgctattaacttggaaaatgtgagtttgttcgcagattc 29971429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 49552132 - 49552054
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagca 131  Q
    |||||||||| || |||| |||| ||||||||||| | || ||||||||||| |||||||||| ||||||||| |||||    
T  49552132 tgtaggcattatgccgttatatgctattaacttggatgctgtaagtttgttcgcagattcatcctttacgtttttagca 49552054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 50194288 - 50194186
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||||| | |||||||| | ||||||||||||| |||| |||| ||||||||||| |  | | ||||||||| |||||||||| ||||||||| |    
T  50194288 gtgatttagatatcatcatattttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgttttt 50194189  T
Q  128 agc 130  Q
    |||    
T  50194188 agc 50194186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 26739305 - 26739252
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    ||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||    
T  26739305 ttagattttatcatattatttgtaagcattttggcgttgtatgctattaacttg 26739252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 14859630 - 14859686
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    |||||||||||| ||||||  || ||||||||||||||||||| |||||||||||||    
T  14859630 ttagattttatcgtattattggttggcattttgtcgttgtatgctattaacttgggt 14859686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 42455769 - 42455673
Alignment:
Q  32 cttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgta 128  Q
    ||||||||| |||||||||  ||||| ||||||||||||||||| ||||||||| | |  | | ||||||||| |||||| | | ||||||||||||    
T  42455769 cttagatttaatcatattagttgtagtcattttgtcgttgtatgctattaacttcgatgttgtgagtttgttcgcagatttaccatttacgtttgta 42455673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 52115969 - 52115913
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    ||||||| ||||||||||| ||||| |||||||| ||| ||||||||||||||||||    
T  52115969 ttagattgtatcatattatttgtagtcattttgttgttatatgttattaacttgggt 52115913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 3848853 - 3848750
Alignment:
Q  28 gtgacttagattttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttg 126  Q
    |||||||  |||||||||||| ||| |||||||||| || || | |||| ||||||||||| | || | ||||||||| |||||||||| |||||||||     
T  3848853 gtgactttaattttatcatatatatttgtaggcattatgccgctatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttt 3848754  T
Q  127 tagc 130  Q
    ||||    
T  3848753 tagc 3848750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 20464923 - 20464840
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagatt 111  Q
    |||||||| ||||||||||||||| |||  |||||||||||| ||||| |||||||||| ||  | | ||||||||| ||||||    
T  20464923 gtgacttaaattttatcatattatttgtgtgcattttgtcgtcgtatgctattaacttgtgtgatatgagtttgttcgcagatt 20464840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 12149727 - 12149661
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttc 104  Q
    |||||||||||||   |||||||||||| ||||||||| |||||| ||||||||| | |||||||||    
T  12149727 ttttatcatattaatcgtaggcattttgccgttgtatgctattaagttgggtactgtgagtttgttc 12149661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 185
Target Start/End: Original strand, 47896290 - 47896443
Alignment:
Q  31 acttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||| ||||||| |||||| ||||| ||||||||||||||||| |||||||||| ||  | | |||||||||  ||||||  | |||| |||| |||     
T  47896290 acttaggttttatcttattatttgtag-cattttgtcgttgtatgctattaacttgagtgttgtgagtttgttcgtagattctccctttaagtttttagg 47896388  T
Q  131 aatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
     || ||||||||| ||| | |  |||||| | ||  |||||||||||||||||||    
T  47896389 gatgtttgtatttaatgtactctatcaatttgaatcaatgaatatcgttttgttt 47896443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 48199912 - 48199966
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaa 82  Q
    |||||||||| ||||||||||||||||||||||||||| | || |||| ||||||    
T  48199912 gtgacttagaatttatcatattatctgtaggcattttgcctttatatgctattaa 48199966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 53508366 - 53508404
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttg 71  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  53508366 ttagattttatcatattatttgtaggcattttgtcgttg 53508404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 7792140 - 7792083
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    |||| ||||||||||||||||||| ||||||||||||| | ||||| | |||||||||    
T  7792140 gtgatttagattttatcatattatttgtaggcattttgccattgtaagctattaactt 7792083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 4821950 - 4822046
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaat 133  Q
    |||| |||||||| | |||||||||||||  ||| |||| |||||||||||||  | | ||||||||| |||||||||  |||| |||| |||||||    
T  4821950 atttcatcatattttttgtaggcattttgctgttatatgctattaacttgggtgatgtgagtttgttcgcagattcattctttatgtttttagcaat 4822046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 25162585 - 25162679
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| ||||||| |||| ||||||||||| |  | | ||||||||| | |||||||| ||||||||| ||||    
T  25162585 attttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcggattcatcctttacgtttttagc 25162679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 25631451 - 25631357
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| || |||| |||||||||||||||| |  | | ||||||||| |||||||||| ||||| ||| ||||    
T  25631451 attttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgttcgcagattcatcctttacatttttagc 25631357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 42719666 - 42719748
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    |||||||||||| | | |||||||||| ||||||| ||||  |||||||||  |||| |||||||||||  ||||||||||||    
T  42719666 attttatcatatatttttgtaggcattatgtcgttatatgccattaacttgaatactgtaagtttgttcgtagattcatcttt 42719748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 12116264 - 12116341
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| || |||| |||| ||||||||||| |  | | |||||||||| ||||||||| ||||||||| ||||    
T  12116264 tgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcttagattcatcctttacgtttttagc 12116341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 12946920 - 12946859
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    |||| |||||||| |||||||| | ||||||||||||| | || |||| |||||||||||||    
T  12946920 gtgatttagatttcatcatattttttgtaggcattttgcccttatatgctattaacttgggt 12946859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 36906288 - 36906365
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| || |||| |||| ||||||||||| |  | | ||||||||| |||||||||| ||||||||| ||||    
T  36906288 tgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcctttacgtttttagc 36906365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 38142665 - 38142718
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    |||||| |||||||||||| |||||||||||| | |||||||  ||||||||||    
T  38142665 ttagatcttatcatattatttgtaggcattttattgttgtatactattaacttg 38142718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 3085249 - 3085193
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    ||||| || |||||||||| ||||||||||||| ||||||| | |||||| ||||||    
T  3085249 ttagaattcatcatattatttgtaggcattttgccgttgtaggctattaaattgggt 3085193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 40993277 - 40993452
Alignment:
Q  11 agaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| ||||||||| |||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||  | | ||||||||| ||||    
T  40993277 agaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgtcgttgtatgttattaacttgggtgttgtgagtttgttcgcaga 40993376  T
Q  110 ttcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||| | ||||||||| |||| || ||||||| ||||| | |  ||| || |||| ||||||||||||||||||||    
T  40993377 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttaaatgaatgaatatcgttttgttt 40993452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 12141278 - 12141103
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactt-taagtttgttctcaga 109  Q
    ||||||| ||||||||| ||||||||||||||||||||||| |||| |||||||| ||||||||| |||||||||||||  || | ||||||||| || |    
T  12141278 gaagcatgggtatttcggtgacttagattttatcatattatttgtatgcattttgccgttgtatgctattaacttgggttgttgtgagtttgttcgcata 12141179  T
Q  110 ttcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||| ||||||||||| |||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  12141178 ttcaccttttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 12141103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 39171560 - 39171424
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||||||| || | ||||||||  |||||    
T  39171560 gaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctatgagtttgtttgcagat 39171461  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    ||| | ||||||||| |||| || ||||||| |||||    
T  39171460 tcaccctttacgtttttagcgatgtttgtatctgatg 39171424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 8001499 - 8001346
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| | ||||||||||| ||||||||| ||||||||||||| || | ||||||||| |||||||| | ||||||||| |    
T  8001499 gtgacttaggttttatcatattatttataggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgttttt 8001400  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    ||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||    
T  8001399 agcgatgtttgtatctgatgcactctatcgatttgaatgaatgaatatcgtttt 8001346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 33 - 185
Target Start/End: Complemental strand, 9977158 - 9977006
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaa 132  Q
    ||||||||||||||||||| | ||| ||||||||||||||||| ||||||||||| |  | | | ||| ||| |||||||| | ||||||||| ||||||    
T  9977158 ttagattttatcatattatttttagacattttgtcgttgtatgctattaacttggatgttgtgaattttttcacagattcaccctttacgtttttagcaa 9977059  T
Q  133 tctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    | ||||||| ||||| | |  |||||| |||| ||||||||||||||||||||    
T  9977058 tgtttgtatctgatgtactctatcaatttaaatgaatgaatatcgttttgttt 9977006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 48316782 - 48316652
Alignment:
Q  12 gaagcataggtatttcgt-gacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| |||||||||  || |||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||| || | ||||||||| |||||    
T  48316782 gaagcatgggtatttcggcgatttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagat 48316683  T
Q  111 tcatcttttacgtttgtagcaatctttgtat 141  Q
    ||| | |||| |||| |||| || |||||||    
T  48316682 tcaccctttaggtttttagcgatgtttgtat 48316652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 42978739 - 42978901
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||||||||  | | |||| |||| |||||||| | ||    
T  42978739 ggtatttcggtgacttaggttttatcatattatatgtaggcattttgccgttgtatgctattaacttgggtgttgtgagttcgttcgcagattcaccctt 42978838  T
Q  119 tacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||||||| |||| || ||||||| ||||| | |  |||||| |    ||||||||||||||||||||    
T  42978839 tacgtttttagcgatgtttgtatctgatggactctatcaattt----gaatgaatatcgttttgttt 42978901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 34899577 - 34899441
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||  |||||||||||||| |||| |||||||| ||||||||| ||||||||||| |  | | ||||||||| |||||    
T  34899577 gaagcatgggtatttcggtgacttaagttttatcatattatttgtatgcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagat 34899478  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    ||| | ||||||||| |||| || |||||||||||||    
T  34899477 tcaccctttacgtttttagcgatgtttgtatttgatg 34899441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 28407861 - 28407714
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatcttt 137  Q
    |||||||||||||| ||||| ||||||| ||||||||| ||||||||||| | || | ||||||||| |||||| | | |||| |||| |||| || |||    
T  28407861 ttttatcatattatttgtagacattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagatttaccctttatgtttttagcgatgttt 28407762  T
Q  138 gtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||||||||| | |  |||||| | || ||||||||||||||||||||    
T  28407761 gtatttgatgtactctatcaatttgaatgaatgaatatcgttttgttt 28407714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 35665088 - 35664986
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||||||||||||||| | | ||||||||||||||||||| |||||||||||||||| | ||||||||| ||||||  || ||||||||| |    
T  35665088 gtgatttagattttatcatattattttttggcattttgtcgttgtatgctattaacttgggtactgtgagtttgttcacagatttctcctttacgttttt 35664989  T
Q  128 agc 130  Q
    |||    
T  35664988 agc 35664986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 48061560 - 48061717
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||| |||||||||||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||| |||||||| | ||||||||| |    
T  48061560 gtgatttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttatgagtttgttcgcagattcaccctttacgttttt 48061659  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||  || ||||||  ||||| | |  ||| || | || ||||||||||||||||||||    
T  48061660 agagatgtttgtacctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 48061717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 28 - 180
Target Start/End: Complemental strand, 37837411 - 37837259
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||  ||||||||||||| |||| |||| ||||||||||||| || | ||||||||| || ||||| | ||||||||| |    
T  37837411 gtgacttaggttttatcatattacttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgttttt 37837312  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttt 180  Q
    ||| || ||||||| ||||| | |  ||| || | || |||||||||||||||    
T  37837311 agcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 37837259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 39328743 - 39328590
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| ||||||||||||   ||||||||||||| |||| |||| ||||||||||||| || | | ||||||| |||||| | ||||||||||| |    
T  39328743 gtgacttaggttttatcatatt---tgtaggcattttgccgttttatgctattaacttgggtgctgtgaatttgttcgcagatttaccttttacgttt-t 39328648  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||||||||| | |  ||| || | || ||||||||||||||||||||    
T  39328647 agcgatgtttgtatttgatgtaatccatcgatttgaatgaatgaatatcgttttgttt 39328590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 45349752 - 45349599
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||| |||||||||||||| ||||||||||||| |||| |||| |||||||||||||  | | ||||||||| ||| |||| | ||||||||| |    
T  45349752 gtgatttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcaggttcaccctttacgttttt 45349653  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    ||| || ||||||| ||||| | |  ||| || ||||  |||||||||||||||    
T  45349652 agcgatatttgtatctgatgtactctatcgatttaaattaatgaatatcgtttt 45349599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 19404727 - 19404591
Alignment:
Q  12 gaagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  ||||||| |||||||||||||||||||||||| ||||||| ||||| ||||| | | ||||||||||| | || | ||||||||| |||||    
T  19404727 gaagcatgagtatttcagtgacttagattttatcatattatttgtaggctttttgccgttgcacgctattaacttggatgctgtgagtttgttcgcagat 19404628  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    ||||| ||||| ||| |||| || || |||| |||||    
T  19404627 tcatcctttacatttttagcgatgttcgtatctgatg 19404591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 28044718 - 28044552
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    ||||||||| ||| |||| |||||||||||||| | ||| ||||||| ||||||||| ||||||||||| |  | | |||||||||  ||||||| | ||    
T  28044718 ggtatttcggtgatttaggttttatcatattatttttagacattttgccgttgtatgctattaacttggatgttatgagtttgttcgtagattcaccctt 28044619  T
Q  119 tacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||||||| |||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  28044618 tacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 28044552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 28476347 - 28476469
Alignment:
Q  11 agaagcataggtatttcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||| || ||||||  |||| ||||||||||||||||||| ||||||||||||| |||   |||||||||||||| || || | ||||||||  |||||    
T  28476347 agaagtatgggtattcggtgatttagattttatcatattatttgtaggcattttgccgtgcaatgttattaacttgagtgctgtgagtttgtttgcagat 28476446  T
Q  111 tcatcttttacgtttgtagcaat 133  Q
    ||| | ||||||||| |||||||    
T  28476447 tcaccatttacgtttttagcaat 28476469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 48930845 - 48930947
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||||||| |||||||||| ||| ||||||||| ||||||||| |||||||||||||| | | ||||||||| |||||||| | | ||||||| |    
T  48930845 gtgatttagatttcatcatattatttgttggcattttgccgttgtatgctattaacttgggtattgtgagtttgttcgcagattcaacctatacgttttt 48930944  T
Q  128 agc 130  Q
    |||    
T  48930945 agc 48930947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 38798919 - 38799016
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||||||||||||||||||||| ||||||||||||| |||  |||| ||||||||||| |  | | ||||||||| |||||||| ||| |||||||    
T  38798919 gtgacttagattttatcatattatttgtaggcattttgccgtcttatgctattaacttggatgttgtgagtttgttcgcagattcaccttgtacgttt 38799016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 13796882 - 13796823
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  13796882 gtgacttaagttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgg 13796823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 24069347 - 24069290
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||| |||||||||    
T  24069347 gtgatttagattttatcatattatttgtaggcattttatcgttgtatgctattaactt 24069290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 35133085 - 35133170
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattca 113  Q
    |||| |||||||| |||||||||| | ||||||||||| ||||||||| |||||||||||||  | | ||||||||| ||||||||    
T  35133085 gtgatttagatttcatcatattatttctaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcagattca 35133170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 130
Target Start/End: Complemental strand, 46822690 - 46822594
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||| |  | | ||||||||| || |||||  |||||||||||||||    
T  46822690 ttagattttatcatattatttgtag-cattttgtcattgtatgctattaacttggatgttgtgagtttgttcgcatattcactttttacgtttgtagc 46822594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 3398328 - 3398387
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    |||| ||||||||||||||||||| | ||||||||||  |||||||||||||||||||||    
T  3398328 gtgatttagattttatcatattatttttaggcattttaccgttgtatgttattaacttgg 3398387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 46244196 - 46244149
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaact 84  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  46244196 attttatcatattatttgtaggcattttgtcattgtatgttattaact 46244149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 47590451 - 47590510
Alignment:
Q  30 gacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||| | |||||||||||||    
T  47590451 gacttaggttttatcatattatttgtaggcattttgccgttgtaagctattaacttgggt 47590510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 25255365 - 25255467
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||||||||| ||||| |||| || ||||||||||||||||||||||| ||||||||| | |  | | ||||||||| ||||| || | ||||||||| |    
T  25255365 gtgacttagagtttataatatcatttgtaggcattttgtcgttgtatgctattaacttagatgttgtgagtttgttcgcagatacaccctttacgttttt 25255464  T
Q  128 agc 130  Q
    |||    
T  25255465 agc 25255467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 26492517 - 26492611
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| ||| ||| |||| ||||||||||| | || | ||||||||| |||||||||||||||||||| ||||    
T  26492517 attttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgctgtgagtttgttcacagattcatcttttacgtttttagc 26492611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 30756789 - 30756675
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  |||||||| |||||||  |||||||||||||| | |||||||||||||||| |||| | ||||||| |||  | |||||| |||| |||||    
T  30756789 gaagcatgagtatttcggtgacttaagttttatcatattatttataggcattttgtcgttttatgctgttaacttaggtgttgtaagttagttcgcagat 30756690  T
Q  111 tcatcttttacgttt 125  Q
    ||| | |||||||||    
T  30756689 tcagcctttacgttt 30756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 46700156 - 46700234
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    ||||||| | ||||||| ||||||||||||||||||||||| | ||||||||||| |||| |||| |||||||| ||||    
T  46700156 gaagcatggatatttcggtgacttagattttatcatattatttataggcattttgccgttatatgctattaactagggt 46700234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 49148068 - 49148011
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    ||||||| |||||||||||||||  ||| ||||||||||||||||||| |||||||||    
T  49148068 gtgacttggattttatcatattaattgttggcattttgtcgttgtatgctattaactt 49148011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 25287139 - 25287083
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaact 84  Q
    |||||||||||||||||||||||| ||||| |||||||  |||||||| ||||||||    
T  25287139 gtgacttagattttatcatattatttgtagccattttgctgttgtatgctattaact 25287083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 5348545 - 5348486
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    |||||||||| |||| |||||||| ||||||||||||  ||||||||| |||||||||||    
T  5348545 gtgacttagaatttaccatattatttgtaggcattttaccgttgtatgctattaacttgg 5348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 9450107 - 9450036
Alignment:
Q  12 gaagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaa 82  Q
    ||||||| |||||||  |||| |||| |||||||||||||| ||||||||||||| ||||||||| ||||||    
T  9450107 gaagcatgggtattttagtgatttaggttttatcatattatttgtaggcattttgccgttgtatgctattaa 9450036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 59 - 185
Target Start/End: Complemental strand, 3223026 - 3222901
Alignment:
Q  59 cattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaa 158  Q
    ||||||| |||||||||||||||||||| ||  | | |||||||||  ||||| ||| ||||||||| |||| || ||| | | ||||| |||  |||||    
T  3223026 cattttgccgttgtatgttattaacttgtgtgttgtgagtttgttcatagatttatcctttacgtttttagcgatatttat-tctgatgtattatatcaa 3222928  T
Q  159 tctaaacgaatgaatatcgttttgttt 185  Q
    | |||| ||||||||||| ||||||||    
T  3222927 tttaaatgaatgaatatcattttgttt 3222901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 19296991 - 19297093
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| | |||||  |||||||||||||| |||||||||||||  ||| |||| |||||| ||||||  | | ||||||||| |||||    
T  19296991 gaagcatgggtatttcggtaacttaagttttatcatattatttgtaggcattttgctgttatatgctattaatttgggtgttgtgagtttgttcgcagat 19297090  T
Q  111 tca 113  Q
    |||    
T  19297091 tca 19297093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 4999982 - 4999921
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    |||| ||| ||||||||||||||| | ||| |||||| ||||||||||||||| ||||||||    
T  4999982 gtgatttaaattttatcatattatttatagacattttttcgttgtatgttattgacttgggt 4999921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 21266559 - 21266636
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| || |||| |||| ||||||||||| | || | ||||||||| |||||||||| ||||||||| ||||    
T  21266559 tgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcacagattcatcatttacgtttttagc 21266636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 32684837 - 32684914
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| || |||| |||| ||||||||||| | || |||||||||||  ||||||||| ||||||||| ||||    
T  32684837 tgtaggcattatgccgttatatgctattaacttggatgctgtaagtttgttcgtagattcatcctttacgtttttagc 32684914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 35261449 - 35261538
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||||||||| | | |||||||||| || ||||||||| ||||||||||| || | | ||||||||| |||||||||| |||| ||||    
T  35261449 attttatcatatatttttgtaggcattatgccgttgtatgctattaacttggatattgtgagtttgttcgcagattcatcctttatgttt 35261538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 38880526 - 38880477
Alignment:
Q  33 ttagattttatcata-ttatctgtaggcattttgtcgttgtatgttatta 81  Q
    ||||||||||||||| |||||||||| ||||||||||||||| |||||||    
T  38880526 ttagattttatcatacttatctgtagacattttgtcgttgtaagttatta 38880477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 43369698 - 43369649
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    ||||||||||||||| | ||||||||||| ||||||||| ||||||||||    
T  43369698 attttatcatattatttataggcattttgccgttgtatgatattaacttg 43369649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 24770386 - 24770442
Alignment:
Q  30 gacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    ||||||| ||||||||||||||  |||| ||||||| |||| |||||||||||||||    
T  24770386 gacttaggttttatcatattattggtagacattttgccgttttatgttattaacttg 24770442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 27341689 - 27341745
Alignment:
Q  29 tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    ||||||| ||||||| ||||||| ||||||||||||| |||| |||| |||||||||    
T  27341689 tgacttaaattttataatattatttgtaggcattttgccgttatatgctattaactt 27341745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 29617649 - 29617593
Alignment:
Q  31 acttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    ||||||||||||||||||||| ||||| |||||||| ||||  || |||||||||||    
T  29617649 acttagattttatcatattatttgtagacattttgttgttgagtgctattaacttgg 29617593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 46822184 - 46822256
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||||||| || |||| |||| ||||||||||| | || | ||||||||| |||||||||| |||||||||    
T  46822184 tgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgttt 46822256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 7640681 - 7640606
Alignment:
Q  55 taggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||| ||||||| |||| ||||||||||| |  | | ||||||||| |||||||||| ||||||||| ||||    
T  7640681 taggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacgtttttagc 7640606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 46339228 - 46339295
Alignment:
Q  58 gcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    ||||| ||||||| |||||||||||||||| |  | | ||||||||| |||||||||| |||||||||    
T  46339228 gcattatgtcgttatatgttattaacttggatgatgtgagtttgttcacagattcatcctttacgttt 46339295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 42408525 - 42408583
Alignment:
Q  72 tatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||| ||||||||||| | || | ||||||||| |||||||||||||||||||| ||||    
T  42408525 tatgctattaacttggatgctgtgagtttgttcgcagattcatcttttacgtttttagc 42408583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 14046767 - 14046679
Alignment:
Q  36 gattttatcatattatctgtaggcattttgtcgttgtatgttat--taacttgggtactttaagtttgttctcagattcatcttttacg 122  Q
    |||||||||||||| | |||||| ||||||| ||| |||| |||  |||||||| || | | ||||||||  |||||||||||||||||    
T  14046767 gattttatcatattgtttgtaggtattttgttgttatatgctattataacttggataatgtgagtttgtttgcagattcatcttttacg 14046679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 14356797 - 14356709
Alignment:
Q  36 gattttatcatattatctgtaggcattttgtcgttgtatgttat--taacttgggtactttaagtttgttctcagattcatcttttacg 122  Q
    |||||||||||||| | |||||| ||||||| ||| |||| |||  |||||||| || | | ||||||||  |||||||||||||||||    
T  14356797 gattttatcatattgtttgtaggtattttgttgttatatgctattataacttggataatgtgagtttgtttgcagattcatcttttacg 14356709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 23425281 - 23425204
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| || |||| |||||||||||||||| | || | ||| |||||  ||||||||| ||||||||| ||||    
T  23425281 tgtaggcattatgccgttatatgttattaacttggatgctgttagtatgttcatagattcatcatttacgtttttagc 23425204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 41553387 - 41553291
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||| |||||||||||||||| || | || | |||||| ||||||||| ||||||||| ||| || | |||||||||  ||||||| | |||||||||    
T  41553387 gtgatttagattttatcatatcatttatacgtattttgccgttgtatgctattaactt-ggtgctgtgagtttgttcctagattcaccctttacgttt 41553291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 3861092 - 3861180
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    ||||||||||||||| ||||||| ||||| | || |||||||| ||||||| |  | | ||||||||| || ||||||  |||||||||    
T  3861092 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcataatttacgttt 3861180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 26610684 - 26610636
Alignment:
Q  77 tattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    ||||||||| |||||| | ||||||||| |||||||| |||||||||||    
T  26610684 tattaactttggtactgtgagtttgttcgcagattcaccttttacgttt 26610636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 4e-37; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 43510335 - 43510509
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||| || | ||||||||| |||||    
T  43510335 gaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgtcgttgtatgtcattaacttgggtgctgtgagtttgttcgcagat 43510434  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||||||| |||| || ||||||||||||| | |  ||| || | || ||||||||||||||||||||    
T  43510435 tcaccctttacgtttttagcgatatttgtatttgatgtactttatcgatttgaatgaatgaatatcgttttgttt 43510509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 56040617 - 56040442
Alignment:
Q  11 agaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| | || | |||||| || ||||    
T  56040617 agaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttggatgctgtgagtttgctcgcaga 56040518  T
Q  110 ttcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||| | ||||||||| |||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  56040517 ttcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 56040442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 2520918 - 2521092
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| ||| |||||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||| |||||    
T  2520918 gaagcatgggtatttcggtgatttagattttatcgtattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagat 2521017  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||||||| |||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  2521018 tcaccctttacgtttttagcgatgtttgtatctgatggactctatcgatttgaatgaatgaatatcgttttgttt 2521092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 21686195 - 21686038
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||| |||||||||||||| ||||||||||||| || |||||||||||||||||||| || | ||||||||| || ||||| | |||||||||||    
T  21686195 gtgatttaggttttatcatattatttgtaggcattttgccgctgtatgttattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttgt 21686096  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  21686095 agcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 21686038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 10496475 - 10496645
Alignment:
Q  13 aagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagatt 111  Q
    |||||| ||||||||| ||| |||| |||||||||||||| |||||||||||||  || ||||| ||||||||||||| |||| ||||||||| ||||||    
T  10496475 aagcatgggtatttcggtgagttaggttttatcatattatttgtaggcattttgctgtcgtatgctattaacttgggtgctttgagtttgttcgcagatt 10496574  T
Q  112 cat-cttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    ||| |||| |||||| |||| || ||||||||||||  | |  |||||| | || ||||||||||||||||    
T  10496575 catcctttaacgtttttagcgatatttgtatttgatatactctatcaatttgaatgaatgaatatcgtttt 10496645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 32766661 - 32766827
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    ||||||||| |||||||  |||||||||||||| |||||||||| |||||||||||| ||||||||||||| || | |||||||||||||||||| | ||    
T  32766661 ggtatttcggtgacttaagttttatcatattatttgtaggcattatgtcgttgtatgctattaacttgggtgctgtgagtttgttctcagattcaccctt 32766760  T
Q  119 tacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    | ||||| |||| || ||||||| ||||| | |  ||| || | || |||||||||| |||||||||    
T  32766761 tgcgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatattgttttgttt 32766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 47320365 - 47320257
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||||||| || | ||||||||| |||||||||  ||||||||| |    
T  47320365 gtgatttagattatatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcattctttacgttttt 47320266  T
Q  128 agcaatctt 136  Q
    ||| |||||    
T  47320265 agcgatctt 47320257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 19853482 - 19853308
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| | ||||||| |||||||  |||||||||||||| | ||||||||||| ||||||||| |||||||||||||  | | ||||||||| |||||    
T  19853482 gaagcatggatatttcggtgacttaagttttatcatattatttctaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagat 19853383  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||||||| || | || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  19853382 tcaccctttacgtttttaacgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 19853308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 29960902 - 29960789
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||||||||||| ||| ||||||||||||| ||||||||| | ||||||||||| || | ||||||||| |||||||| |||||| |||| |    
T  29960902 gtgatttagattttatcatactatttgtaggcattttgccgttgtatgcttttaacttgggtgctgtgagtttgttcgcagattcaccttttatgttttt 29960803  T
Q  128 agcaatctttgtat 141  Q
    ||| || |||||||    
T  29960802 agcgatatttgtat 29960789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 36161863 - 36161952
Alignment:
Q  24 tttcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattca 113  Q
    |||||||| ||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||  | | ||||||||| ||||||||    
T  36161863 tttcgtgatttagattttatcatattatttgtaggcatttggtcgttatatgttattaacttgggtgttgtgagtttgttcacagattca 36161952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 22611322 - 22611441
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  |||||||| |||||||  |||||||||||||| ||||||||||||| ||||||||| |||||| |||||| || | ||||||||| |||||    
T  22611322 gaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatggtattaaattgggtgctgtgagtttgttcgcagat 22611421  T
Q  111 tcatcttttacgtttgtagc 130  Q
    ||| | ||||||||| ||||    
T  22611422 tcaccctttacgtttttagc 22611441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 11299963 - 11299866
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    ||||||||  ||||||||||||||  |||||||||||| |||| ||||||||||||||||||  | | ||||||||| |||||||||| |||||||||    
T  11299963 gtgacttatgttttatcatattattcgtaggcattttggcgttttatgttattaacttgggtgttgtgagtttgttcgcagattcatcctttacgttt 11299866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 45418668 - 45418729
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||    
T  45418668 gtgacttagattttatcatattatttgtaggcattttgtcgttgtatgctattaacatgggt 45418729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 6155176 - 6155071
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttggg---tactttaagtttgttctcagattcatcttttacgtt 124  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||   |||| | ||||||||| |||||||| | |||| |||    
T  6155176 gtgatttagattctatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctactgtgagtttgttcgcagattcaccctttatgtt 6155077  T
Q  125 tgtagc 130  Q
    | ||||    
T  6155076 tttagc 6155071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 35348464 - 35348582
Alignment:
Q  29 tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgta 128  Q
    |||||||| |||||||||||||| ||||||||||||| | || |||| |||||||||||||  | | ||||||||  |||||||| | ||||||||| ||    
T  35348464 tgacttaggttttatcatattatttgtaggcattttgccattttatgctattaacttgggtgttgtgagtttgtttgcagattcaccctttacgttttta 35348563  T
Q  129 gcaatctttgtatttgatg 147  Q
    || || ||||||| |||||    
T  35348564 gcgatgtttgtatctgatg 35348582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 9714066 - 9714163
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||| |||||||| ||  | | ||||||||| ||| |||| | |||||||||    
T  9714066 gtgaattagattttatcatattatttgtaggcattttgtcattgtatgttgttaacttgagtgttgtgagtttgttcgcaggttcaccctttacgttt 9714163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 17949276 - 17949119
Alignment:
Q  29 tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttac-gtttgt 127  Q
    |||||||| |||||||||||||| |||| |||||||||  |||||||||||||||||||||  | | ||||||||| |||||||| | |||||  ||| |    
T  17949276 tgacttaggttttatcatattatatgtatgcattttgttcttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttacatttttt 17949177  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||  | |  ||| || | || ||||||||||||||||||||    
T  17949176 agcgatgtttgtatctgatatactctatcgatttgaatgaatgaatatcgttttgttt 17949119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 17953128 - 17952971
Alignment:
Q  29 tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttac-gtttgt 127  Q
    |||||||| |||||||||||||| |||| |||||||||  |||||||||||||||||||||  | | ||||||||| |||||||| | |||||  ||| |    
T  17953128 tgacttaggttttatcatattatatgtatgcattttgttcttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttacatttttt 17953029  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||  | |  ||| || | || ||||||||||||||||||||    
T  17953028 agcgatgtttgtatctgatatactctatcgatttgaatgaatgaatatcgttttgttt 17952971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 22305573 - 22305516
Alignment:
Q  29 tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||    
T  22305573 tgacttagattttatcatattatttgtaggtattttgtcgttgtatgctattaacttg 22305516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 29120329 - 29120276
Alignment:
Q  31 acttagattttatcatattatctgtaggcattttgtcgttgtatgttattaact 84  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  29120329 acttagattttatcatattatttgtaggcattttgtcgttgtatgctattaact 29120276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 37465638 - 37465699
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||    
T  37465638 gtgatttagattttatcatattatttgtaagcattttgtcgttgtatgctattaacttgggt 37465699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 24099029 - 24098903
Alignment:
Q  20 ggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||| ||||| ||| ||||||||| ||| || | ||||||||| ||||| ||   ||    
T  24099029 ggtatttcagtgacttaggttttatcatattatttgtaggcattttgccgttg-atgctattaactt-ggtgctgtgagtttgttcgcagatccactctt 24098932  T
Q  119 tacgtttgtagcaatctttgtatttgatg 147  Q
    ||||||| ||||||| ||||||| |||||    
T  24098931 tacgtttttagcaatgtttgtatctgatg 24098903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 33921193 - 33921269
Alignment:
Q  12 gaagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    ||||||| |||||||| |||||||||||||||||||||||| |||||||||| | | |||||||| |||||||||||    
T  33921193 gaagcatgggtatttcagtgacttagattttatcatattatttgtaggcattgtatagttgtatgctattaacttgg 33921269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 43095785 - 43095881
Alignment:
Q  29 tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||||||||||||||||| || |||||| ||||||| |||||||| |||||| |||| |  | | ||||||||| |||||||||| |||||||||    
T  43095785 tgacttagattttatcatatcatttgtaggtattttgtagttgtatgctattaatttggatgatgtgagtttgttcgcagattcatcatttacgttt 43095881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 53811167 - 53811285
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  |||||||| |||||||  |||||||||||||| ||||||||||||| ||||||||| |||||||||||||  | | || |||||| |||||    
T  53811167 gaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcattttggcgttgtatgctattaacttgggtgttgtgag-ttgttcgcagat 53811265  T
Q  111 tcatcttttacgtttgtagc 130  Q
    ||| | ||||||||| ||||    
T  53811266 tcaccctttacgtttttagc 53811285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 180
Target Start/End: Complemental strand, 48257575 - 48257433
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatcttt 137  Q
    |||||||||||||| |||||| |||||| ||||||||| ||||||||||| |  | | ||||||||| |||||||| | ||||||||| || | || |||    
T  48257575 ttttatcatattatttgtaggtattttgccgttgtatgctattaacttggattttgtgagtttgttcgcagattcaccctttacgtttttaacgatgttt 48257476  T
Q  138 gtatttgatgaattgaatcaatctaaacgaatgaatatcgttt 180  Q
    |||| ||||| | |  ||| || | || |||||||||||||||    
T  48257475 gtatctgatgtactctatcgatttgaatgaatgaatatcgttt 48257433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 53444274 - 53444376
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| |||||  |||||  |||| |||| ||||||||||||| || | |||||||||  ||||||| ||||||||||| |    
T  53444274 gtgacttaggttttatcatattatttgtagatatttttccgttttatgctattaacttgggtgctgtgagtttgttcgtagattcaccttttacgttttt 53444373  T
Q  128 agc 130  Q
    |||    
T  53444374 agc 53444376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 54022016 - 54022073
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    |||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||    
T  54022016 gtgacttagattttatcatattatttgtagaca-tttgtcgttgtatgttattaacttg 54022073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 22806674 - 22806751
Alignment:
Q  11 agaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    |||||||||  ||||||| ||||||| || |||||||||||| |||| ||||||||| ||||||||||||||||||||    
T  22806674 agaagcataaatatttcggtgacttatatattatcatattatttgtaagcattttgttgttgtatgttattaacttgg 22806751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 36194864 - 36194949
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattca 113  Q
    |||| |||||||| |||||||||| ||||||||||||| ||||||||| ||||||||||| |  | | ||||||||| ||||||||    
T  36194864 gtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattca 36194949  T

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Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 44596803 - 44596900
Alignment:
Q  16 cataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattc 112  Q
    ||||||||||||| ||| ||| ||||||||||||||| |||||  |||||  ||||||||| ||||||||||||| || | ||||||||| |||||||    
T  44596803 cataggtatttcgatgatttacattttatcatattatttgtagctattttaccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattc 44596900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 9178519 - 9178567
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  9178519 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttg 9178567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 12199644 - 12199545
Alignment:
Q  30 gacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtag 129  Q
    |||||||| ||||||||||||| |||||| |||||   ||||||||||||| ||||||||  | | ||||||||| |||||||| | |||||||||||||    
T  12199644 gacttagaatttatcatattatttgtaggtattttactgttgtatgttatt-acttgggtgttgtgagtttgttcgcagattcaccatttacgtttgtag 12199546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 21662576 - 21662712
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||| |||||||||||||| ||||| || ||||  |||||||| |||||||||| ||  | | || |||||| ||| |    
T  21662576 gaagcatgggtatttcggtgacttaggttttatcatattatttgtagacactttggtgttgtatgctattaacttgagtgttgtgaggttgttcgcagtt 21662675  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    ||| | |||| |||| |||| || |||||||||||||    
T  21662676 tcaccatttatgtttttagcgatgtttgtatttgatg 21662712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 21671340 - 21671476
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||| |||||||||||||| ||||| || ||||  |||||||| |||||||||| ||  | | || |||||| ||| |    
T  21671340 gaagcatgggtatttcggtgacttaggttttatcatattatttgtagacactttggtgttgtatgctattaacttgagtgttgtgaggttgttcgcagtt 21671439  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    ||| | |||| |||| |||| || |||||||||||||    
T  21671440 tcaccatttatgtttttagcgatgtttgtatttgatg 21671476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 52978884 - 52978959
Alignment:
Q  13 aagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    |||||| ||||||||| ||||||||||||||| ||||||| |||||  |||||||| |||||| ||||||||||||    
T  52978884 aagcatgggtatttcggtgacttagattttattatattatttgtagttattttgtcattgtattttattaacttgg 52978959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 13634262 - 13634428
Alignment:
Q  20 ggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    |||||||| |||| |||| ||||||| |||||| |||||  |||||| ||||||||| ||||||||||||| || | | |||||||  ||||||| | ||    
T  13634262 ggtatttcagtgatttaggttttatcttattatttgtagttattttgccgttgtatgctattaacttgggtgctgtgaatttgttcggagattcaccctt 13634361  T
Q  119 tacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||| || |||| || ||||||| ||||| | |  ||| || | || ||||||||||| ||||||||    
T  13634362 tacgcttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcattttgttt 13634428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 28514935 - 28514989
Alignment:
Q  31 acttagattttatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    |||| ||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  28514935 actttgattttatcatattatctgtatgtattttgtcgttatatgttattaactt 28514989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 31891240 - 31891138
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||||||| || ||||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||| || ||||| | | ||||||| |    
T  31891240 gtgatttagatttcattatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctatacgttttt 31891141  T
Q  128 agc 130  Q
    |||    
T  31891140 agc 31891138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 43853604 - 43853658
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    ||||||||||||||||||| |||  ||||||||| ||||||||||||||||||||    
T  43853604 ttagattttatcatattatttgtcagcattttgttgttgtatgttattaacttgg 43853658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 2115496 - 2115419
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| ||||||| |||| ||||||||||| |||| | ||||||||| |||||||||| |||| |||| ||||    
T  2115496 tgtaggcattatgtcgttatatgctattaacttggatactgtgagtttgttcgcagattcatcctttatgtttttagc 2115419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 18935922 - 18935999
Alignment:
Q  13 aagcataggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    ||||||||||||| | |||| |||||||| |||||||||| |||||||||||||   ||||| |||||||||||||||    
T  18935922 aagcataggtattctggtgatttagatttcatcatattatttgtaggcattttgctattgtacgttattaacttgggt 18935999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 21090323 - 21090400
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| ||||||| |||||||||||||||| || | | ||||||||  |||||||||| ||||||||| ||||    
T  21090323 tgtaggcattatgtcgttatatgttattaacttggatagtgtgagtttgtttgcagattcatcctttacgtttttagc 21090400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 26633624 - 26633467
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||  | ||||||||||  ||||||||| ||||| ||| | |  | | ||||||||| |||||||| | ||||||||| |    
T  26633624 gtgacttaggttttatcatattaaatataggcattttaccgttgtatgctattagcttagatgttgtgagtttgttcgcagattcaccctttacgttttt 26633525  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||  || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  26633524 agtgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 26633467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 36184690 - 36184746
Alignment:
Q  31 acttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    |||| |||||||||||| ||| | ||||||||||||||||||||| |||||||||||    
T  36184690 actttgattttatcatactatttctaggcattttgtcgttgtatgctattaacttgg 36184746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 51318149 - 51318244
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagca 131  Q
    |||||||||||| | | |||||||||| ||||||| |||| ||||||||||| |  | | ||||||||| |||||||||| ||||||||| |||||    
T  51318149 attttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcacagattcatcctttacgtttttagca 51318244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 56156595 - 56156492
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||  ||||||||  |||| ||||||||||||| |||| |||| |||| || |||||  | | ||||||||| |||||||| ||||||||||| |    
T  56156595 gtgacttatgttttatcaatttatttgtaggcattttgccgttttatgctatttacctgggtgttgtgagtttgttcgcagattcaccttttacgttttt 56156496  T
Q  128 agca 131  Q
    ||||    
T  56156495 agca 56156492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 28857557 - 28857659
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||||||| |||||||| | |||||| |||||| | || |||| |||||||||||   || | ||||||||| |||||||||| ||||||||| |    
T  28857557 gtgatttagatttcatcatattttttgtaggtattttgcccttatatgctattaacttggcagctgtgagtttgttcgcagattcatcctttacgttttt 28857656  T
Q  128 agc 130  Q
    |||    
T  28857657 agc 28857659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 37030408 - 37030494
Alignment:
Q  20 ggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttct 105  Q
    |||||||| ||||||||||  |||||||||||| ||||| ||||| | | ||||||| ||||||||||||| || ||| ||||||||    
T  37030408 ggtatttcagtgacttagaaattatcatattatttgtagacatttagccattgtatgctattaacttgggtgctgtaaatttgttct 37030494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 38706635 - 38706541
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | ||||| |||| ||||||| |||| ||||||||||| |  | | ||||||||| |||||||||||||||||||| ||||    
T  38706635 attttatcatatatttttgtagacattatgtcgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcttttacgtttttagc 38706541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 44947576 - 44947670
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| || |||| |||||||||||||||| |  | | ||||||||| |||||||||| ||||||||| ||||    
T  44947576 attttatcatatatttttgtaggcattgtgccgttatatgttattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagc 44947670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 52933902 - 52933844
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    |||| ||||||||||||||||||| |||||| ||||||   ||||||||||||||||||    
T  52933902 gtgatttagattttatcatattatttgtaggtattttgcttttgtatgttattaacttg 52933844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 4142649 - 4142560
Alignment:
Q  96 agtttgttctcagattcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||||||||| |||||||| | ||||| ||| ||||||| ||||||||||||| | |  ||| || | || ||||||||||||||||||||    
T  4142649 agtttgttcgcagattcaccctttacatttttagcaatgtttgtatttgatgtactctatcgatttgaatgaatgaatatcgttttgttt 4142560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 20569438 - 20569515
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| ||| ||| |||| ||||||||||| || | | ||||||||| |||||||||| ||||||||| ||||    
T  20569438 tgtaggcattatgttgttatatgctattaacttggataatgtgagtttgttcgcagattcatcctttacgtttttagc 20569515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 47417843 - 47417920
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| || |||| |||||||||||||||  | || | ||||||||| |||||||||| ||||||||| ||||    
T  47417843 tgtaggcattatgccgttatatgttattaacttgaatgctgtgagtttgttcacagattcatcctttacgtttttagc 47417920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 55228132 - 55228181
Alignment:
Q  26 tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatg 75  Q
    |||||| |||||||| |||||||||| ||||| |||||||||||||||||    
T  55228132 tcgtgatttagatttaatcatattatttgtagacattttgtcgttgtatg 55228181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 9048829 - 9048917
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    ||||||||||||||| |||||||||||||||||  | || ||| |||||||||  | | ||||||||  |||||||| | |||||||||    
T  9048829 attttatcatattatttgtaggcattttgtcgtcatgtgctataaacttgggtgttgtgagtttgtttacagattcaccctttacgttt 9048917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 21554734 - 21554638
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaat 133  Q
    |||||||| |||||| ||||||||||||| | |||| || ||||||||||| | |  | ||||||||| || ||||||| |||| |||| |||||||    
T  21554734 attttatcttattatttgtaggcattttgcccttgtttgctattaacttggatgcaatgagtttgttcgcatattcatcctttatgtttttagcaat 21554638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 52944450 - 52944526
Alignment:
Q  12 gaagcataggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    ||||||| |||||| | |||| |||||||| |||||||| | |||||||||||||| ||| |||| |||||||||||    
T  52944450 gaagcatgggtattctggtgatttagatttcatcatattttttgtaggcattttgtagttatatgctattaacttgg 52944526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 10258849 - 10258802
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatg 75  Q
    |||||||||||||||||||||||| ||||| |||||||  ||||||||    
T  10258849 gtgacttagattttatcatattatttgtagacattttgctgttgtatg 10258802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 42032499 - 42032424
Alignment:
Q  11 agaagcataggtatttcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    ||||||||  |||| | |||| |||||| ||||||||||||  |||| ||||||| ||||||||| ||||||||||    
T  42032499 agaagcatgagtatcttgtgatttagatgttatcatattattggtagccattttgccgttgtatgctattaacttg 42032424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 2069551 - 2069458
Alignment:
Q  11 agaagcataggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttc 104  Q
    |||||||| |||||| | |||| ||| ||||||||||||||| |||| |||||||  |||| |||||||||||||||| | |||| || ||||||    
T  2069551 agaagcatgggtattatggtgatttatattttatcatattatttgtatgcattttaccgtt-tatgttattaacttggatgctttgagattgttc 2069458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 26090884 - 26090761
Alignment:
Q  12 gaagcataggtatttcg-tgacttagat----tttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctc 106  Q
    ||||||| ||||||||| ||||||||||    ||||||||||||| || ||  || ||||||||||||| |||||| |||| | || | | ||||||  |    
T  26090884 gaagcattggtatttcggtgacttagatatattttatcatattatttgcagatatattgtcgttgtatgctattaatttggatgctgtgaatttgtttac 26090785  T
Q  107 agattcatcttttacgtttgtagc 130  Q
    ||||||||| ||||||||| ||||    
T  26090784 agattcatcctttacgtttttagc 26090761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 36204332 - 36204230
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||||||||||||||| |||||  |||||| | || ||||||||||| |||| |  | | ||||||||| |||||||| | |||| |||| |    
T  36204332 gtgatttagattttatcatattatttgtagatattttgccattatatgttattaatttggatgttgtgagtttgttcacagattcaccctttatgttttt 36204233  T
Q  128 agc 130  Q
    |||    
T  36204232 agc 36204230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 49410387 - 49410481
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| || |||| |||||||||||||||| |  | | ||||||||| | |||||||| ||||||||| ||||    
T  49410387 attttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgttcgctgattcatcctttacgtttttagc 49410481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 4821080 - 4821125
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaa 82  Q
    ||||||||||||||| ||||| |||||| ||||||||||| |||||    
T  4821080 attttatcatattatttgtagacattttatcgttgtatgtaattaa 4821125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 7008942 - 7008885
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    |||| ||| ||||||||||||||| ||| | ||||||| ||||||||| |||||||||    
T  7008942 gtgatttaaattttatcatattatttgtggacattttgccgttgtatgctattaactt 7008885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 51888164 - 51888107
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    |||| ||||||||||||||||||| ||||||| ||||| | ||| ||| |||||||||    
T  51888164 gtgatttagattttatcatattatttgtaggcgttttgccattgcatgctattaactt 51888107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 53616558 - 53616481
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| || |||| |||| ||||||||||| |  | | ||||||||| |||||||||| ||||||||| ||||    
T  53616558 tgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcctttacgtttttagc 53616481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 9645432 - 9645360
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||| ||| || |||| |||| ||||||||||| | || | ||||||||| |||||||||| |||||||||    
T  9645432 tgtaggtattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgttt 9645360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 36700423 - 36700479
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatg 75  Q
    ||||||||| ||||||| ||||||||||||||| |  | ||||||||||||||||||    
T  36700423 ggtatttcgatgacttaaattttatcatattatttaaaagcattttgtcgttgtatg 36700479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 2e-35; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 4904117 - 4903942
Alignment:
Q  11 agaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| | ||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |  | | |||||||||  |||    
T  4904117 agaagcatggatatttcggtgacttagattttatcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgtgagtttgttcgtaga 4904018  T
Q  110 ttcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||| | ||||||||| ||||||| ||| ||||||||| | |  |||||| |||| ||||||||||||||||||||    
T  4904017 ttcagcctttacgtttttagcaatatttatatttgatgtactctatcaatttaaatgaatgaatatcgttttgttt 4903942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 4778882 - 4779056
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||  |||||||||||||| ||||||||||||| |||||||||||||||| |||||| || | ||||||||| |||||    
T  4778882 gaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgttattaatttgggtgctgtgagtttgttcgcagat 4778981  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||||||| |||| || ||||||||||||| | |  ||| || | || |||||||||| |||||||||    
T  4778982 tcaccctttacgtttttagcgatgtttgtatttgatgtactctatcgatttgaatgaatgaatatagttttgttt 4779056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 7646607 - 7646781
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  |||||||| |||||||  |||||||||||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||| |||||    
T  7646607 gaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagat 7646706  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| ||||||||||| |||| |||||| ||||||||| | |  ||| || | || ||||||||||||||||||||    
T  7646707 tcaccttttacgtttttagcgatctttatatttgatgtactttatcgatttgaatgaatgaatatcgttttgttt 7646781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 25509031 - 25508865
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    ||||||||| |||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||  | | ||||||||| |||||||||| ||    
T  25509031 ggtatttcgatgacttagattttatcgtattatttgtaggcattttgccgttgtatgttattaacttgggtgatgtgagtttgttcgcagattcatcgtt 25508932  T
Q  119 tacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    || |||| || | || ||||||| ||||| | |  |||||| | || |||| |||||||||||||||    
T  25508931 tatgtttttaccgatgtttgtatatgatgtactctatcaatttgaatgaataaatatcgttttgttt 25508865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 38445303 - 38445469
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    ||||||||| |||||||  |||||||||||||| ||||||||||||| | ||||||||||||||||| ||| || | ||||||||| |||||||||| ||    
T  38445303 ggtatttcggtgacttaagttttatcatattatttgtaggcattttgccattgtatgttattaactttggtgctgtgagtttgttcgcagattcatcctt 38445402  T
Q  119 tacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||||||| || |||| ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  38445403 tacgtttttaacaatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 38445469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 37876576 - 37876403
Alignment:
Q  13 aagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagatt 111  Q
    |||||| ||||||||| ||||||| ||||||||||||||| ||||||||||||| ||| ||||| |||||||||||||  |   ||||||||| ||||||    
T  37876576 aagcatgggtatttcggtgacttaaattttatcatattatttgtaggcattttgccgtcgtatgctattaacttgggtgatgcgagtttgttcgcagatt 37876477  T
Q  112 catcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    || | |||| |||| |||| || ||||||||||||| | |  |||||| | || ||||||||||||||||||||    
T  37876476 caccatttatgtttttagcgatgtttgtatttgatgtactctatcaatttgaatgaatgaatatcgttttgttt 37876403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 29173690 - 29173514
Alignment:
Q  13 aagcataggtatttcg-tgacttagattttatcatattatc---tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcag 108  Q
    |||||| ||||||||| |||||||||||||||||||||||    |||| ||||||||| |||||||||||||||||| |||  | | ||||||||| |||    
T  29173690 aagcatgggtatttcggtgacttagattttatcatattattatttgtatgcattttgttgttgtatgttattaactttggtgttgtgagtttgttcgcag 29173591  T
Q  109 attcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||||||| ||||||||| |||| || ||||||| ||||| | | ||||||| | || |||| |||||| ||||||||    
T  29173590 attcatcctttacgtttttagcgatgtttgtatctgatgtaatcaatcaatttgaatgaataaatatcattttgttt 29173514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 31788602 - 31788759
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| ||||| |||||||| ||||||||||||| ||||||||| ||||||||||| | || | ||||||||| |||||||| | ||||||||| |    
T  31788602 gtgacttaggttttaacatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagattcaccctttacgttttt 31788701  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  31788702 agcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 31788759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 41694767 - 41694868
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| |||  ||||||||||||| || ||||||| ||||||||| |    
T  41694767 gtgacttagattttatcatattatttataggcattttgtcgttatatgttattaactttggt-gtttaagtttgttcacaaattcatcatttacgttttt 41694865  T
Q  128 agc 130  Q
    |||    
T  41694866 agc 41694868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 5427823 - 5427666
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| || | ||||||| |||||||||| ||||||||||||| || | ||||||||| |||||||| | |||||| || |    
T  5427823 gtgacttaggttttatcatattatttgcaagcattttatcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgctttt 5427724  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  5427723 agcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 5427666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 18763614 - 18763771
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| ||||||||||||| |||| |||| |||||||||||||  | | ||||||||| |||||||| | ||||||||| |    
T  18763614 gtgacttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgttttt 18763713  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||| | |  ||  || | || ||||||||||||||||||||    
T  18763714 agcgatatttgtatctgatgtactctattgatttgaatgaatgaatatcgttttgttt 18763771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 33923851 - 33924008
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| || |||| |||||||||| |||| ||||||||||||| || | ||||||||| || ||||| ||||||| ||| |    
T  33923851 gtgacttaggttttatcatattatttgcaggcgttttgtcgttttatgctattaacttgggtgctgtgagtttgttcgcatattcaccttttaccttttt 33923950  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  33923951 agcgatttttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttttgttt 33924008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 17249101 - 17248993
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||| ||||||||||| ||||| ||||||| ||||||||| ||||||||||||| || | ||||||||| |||||||||| ||||||||| |    
T  17249101 gtgatttagattatatcatattatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcatttacgttttt 17249002  T
Q  128 agcaatctt 136  Q
    ||| |||||    
T  17249001 agcgatctt 17248993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 35220499 - 35220631
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatctttgtatttgatgaattg 152  Q
    ||||||||||||||||||||||| ||||||||||||| || | ||||||||| || ||||| | ||||||||| |||| |||||||||| ||||| | |     
T  35220499 tgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttagcgatctttgtatctgatgtactc 35220598  T
Q  153 aatcaatctaaacgaatgaatatcgttttgttt 185  Q
     |||||| | || |||||||| |||||||||||    
T  35220599 tatcaatttgaatgaatgaatgtcgttttgttt 35220631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 12554132 - 12554038
Alignment:
Q  31 acttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||  | | ||||||||| |||||||| | |||||||||    
T  12554132 acttaggttttatcatattatttgtaggcattttgtcgttgtatgatattaacttgggtgttgtgagtttgttcgcagattcaccctttacgttt 12554038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 7677843 - 7677670
Alignment:
Q  13 aagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagatt 111  Q
    |||||| |||||||| |||| |||| |||||||||||||| | ||||||||||| ||||||||| ||||||||||||| || | ||||||||  ||  ||    
T  7677843 aagcatgggtatttccgtgaattaggttttatcatattatttttaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcaagtt 7677744  T
Q  112 catcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    || ||||||||||| |||| || ||| ||| ||||  | |  |||||| ||||  |||||||||||||||||||    
T  7677743 caccttttacgtttttagcgatgtttatatctgatatactctatcaatttaaaaaaatgaatatcgttttgttt 7677670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 30399983 - 30399890
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttac 121  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||| |||||||| |||  | ||||||||||| |||||||||| |||||    
T  30399983 gtgacttagattttatcatattatttgtaggcattttgccgtcgtatgtcattaacttaggtgttgtaagtttgttcgcagattcatcctttac 30399890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 1421805 - 1421940
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| ||| |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||  | | ||||||||  |||||    
T  1421805 gaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgtttgcagat 1421904  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    ||| | ||||||||| |||  || ||||||| |||||    
T  1421905 tca-cctttacgtttttagtgatgtttgtatctgatg 1421940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 37994430 - 37994524
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacg 122  Q
    |||| ||||||||||||||||||| |||||||||||||  ||| |||| |||||||||||||  | | ||||||||| |||||||||||||||||    
T  37994430 gtgatttagattttatcatattatttgtaggcattttgctgttatatgctattaacttgggtgttgtgagtttgttcgcagattcatcttttacg 37994524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 8809426 - 8809522
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||| ||||||||||| |  | | ||||||||| ||||| ||||||||||||||    
T  8809426 gtgacttagattttatcatattata-gtagacattttgtcgttgtatgctattaacttggatgttgtgagtttgttcgcagatccatcttttacgttt 8809522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 33 - 130
Target Start/End: Complemental strand, 10237165 - 10237068
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||  | | ||||||||| |||||||| | | ||||||| ||||    
T  10237165 ttagatttcatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacgtttttagc 10237068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 4100473 - 4100594
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    ||||||||| |||||||  |||||||||||||| ||||||||||||| ||||||||| ||||||||| |||  | | ||||||||| |||||||| | ||    
T  4100473 ggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgatattaactt-ggtgttgtgagtttgttcgcagattcaccctt 4100571  T
Q  119 tacgtttgtagcaatctttgtat 141  Q
    ||||||| |||| || |||||||    
T  4100572 tacgtttttagcgatgtttgtat 4100594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 9169229 - 9169127
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||  | |||||||||||| ||||||||||||| ||||||||| ||||||||||| | || | ||||||||| |||||    
T  9169229 gaagcatgggtatttcggtgacttaagtcttatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcacagat 9169130  T
Q  111 tca 113  Q
    |||    
T  9169129 tca 9169127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 1415703 - 1415860
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||| ||||| ||||||||||||  ||||  ||| |||||||||||||  | | ||||||||| |||||||| |||| |||||| |    
T  1415703 gtgacttaggttttatcagattatttgtaggcattttaccgtttaatgctattaacttgggtgttgtgagtttgttcgcagattcacctttaacgttttt 1415802  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||| | |  ||| || | || ||||||||||| ||||||||    
T  1415803 agcgatgtttgtatctgatgtaatctatcgatttgaatgaatgaatatcattttgttt 1415860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 11985187 - 11985034
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| |||||||||||||  |||||||  ||||||||||| |  | | | ||||||| || ||||||| ||||||||| |    
T  11985187 gtgacttaggttttatcatattatttgtaggcattttgctgttgtatcctattaacttggatgttgtgaatttgttcgcaaattcatcatttacgttttt 11985088  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    ||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||    
T  11985087 agcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtttt 11985034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 12677404 - 12677248
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| ||||||||||||  |||| |||| |||||||||||||| | | ||||| ||| |||||||| | |||| |||| |    
T  12677404 gtgacttaggttttatcatattat-tgtaggcatttttccgttttatgctattaacttgggtattatgagtttattcgcagattcaccctttatgttttt 12677306  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||| | |   || || | || ||||||||||||||||||||    
T  12677305 agcgatgtttgtatctgatgtaatctgtcgatttgaatgaatgaatatcgttttgttt 12677248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 28533900 - 28533811
Alignment:
Q  36 gattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||||||| ||  | | ||||||||| ||||| || |||||||||||    
T  28533900 gattttatcatattatttgtaggtattttgtcgttgtatgctattaacttgagtgttgtgagtttgttcgcagatccaccttttacgttt 28533811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 147
Target Start/End: Complemental strand, 33585679 - 33585570
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatcttt 137  Q
    |||||||||||||| |||| |||||||| ||||||||| |||||||||||||  | | ||||||||| || ||||||| ||||||||| || | || |||    
T  33585679 ttttatcatattatttgtatgcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatcctttacgtttttaacgatgttt 33585580  T
Q  138 gtatttgatg 147  Q
    |||| |||||    
T  33585579 gtatctgatg 33585570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 36692020 - 36692177
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||| |||||||||||||| ||||||||||||| |||| |||| ||||||||||| |  | | ||||||||| |||||||| | ||||||||  |    
T  36692020 gtgatttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttggttgttgtgagtttgttcacagattcaccctttacgttctt 36692119  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||| | |  ||| || | || ||||| ||||||||||||||    
T  36692120 agcgatgtttgtatctgatgtactctatcgatttgaatgaatgtatatcgttttgttt 36692177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 27097370 - 27097242
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    ||||||||| |||||||  |||||||||||||| |||||| |||||| ||||||||  |||||||||||||  | | ||||||||  |||||||| | ||    
T  27097370 ggtatttcggtgacttaagttttatcatattatttgtaggaattttgccgttgtatactattaacttgggtgttgtgagtttgtttgcagattcaccctt 27097271  T
Q  119 tacgtttgtagcaatctttgtatttgatg 147  Q
    ||||||| |||  || |||||||||||||    
T  27097270 tacgtttttagagatatttgtatttgatg 27097242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 14955680 - 14955767
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatctttta 120  Q
    ||||||||||||||||||| ||||| |||||| || ||||||||||||||||| |||  | | ||||||||| |||||||||| ||||    
T  14955680 ttagattttatcatattatttgtagacattttatcattgtatgttattaacttaggtgttgtgagtttgttcgcagattcatccttta 14955767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 17994697 - 17994561
Alignment:
Q  16 cataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgt----tattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||||||||| | ||||||||    ||||||||||| |  | | ||||||||| || ||    
T  17994697 cataggtatttcggtgacttaaattttatcatattatttgtaggcattttgccattgtatgtatgctattaacttggatgttgtgagtttgttcgcatat 17994598  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    |||||  ||||||||||||| || || |||| |||||    
T  17994597 tcatccgttacgtttgtagcgatgttagtatctgatg 17994561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 29279524 - 29279405
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||||||| ||||||||||||||| ||||||||||||| |||| |||| ||||||||  |||  | | ||||||||| || ||||| | ||||||||| |    
T  29279524 gtgacttaaattttatcatattatttgtaggcattttgccgttttatgctattaactatggtgttgtgagtttgttcgcatattcaccatttacgttttt 29279425  T
Q  128 agcaatctttgtatttgatg 147  Q
    ||| || | |||||||||||    
T  29279424 agcgatgtctgtatttgatg 29279405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 37416856 - 37416946
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    |||| ||| ||||||||||||||| ||||| ||||||| ||||||||||| |||||||||||  | ||||||||||| || ||||| ||||    
T  37416856 gtgatttatattttatcatattatttgtagacattttgccgttgtatgttgttaacttgggtgttataagtttgttcgcacattcaccttt 37416946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 43397072 - 43396971
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| |||| |||||||| |||| |||| |||||||||||||  | | ||||||||| |||||||| | ||||||||| |    
T  43397072 gtgacttaggttttatcatattatttgtacgcattttgccgttttatgctattaacttgggtgttgttagtttgttc-cagattcaccctttacgttttt 43396974  T
Q  128 agc 130  Q
    |||    
T  43396973 agc 43396971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 6358835 - 6358774
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    |||| ||||||||||||||||||| |||| | |||||||||||||||| |||||||||||||    
T  6358835 gtgatttagattttatcatattatttgtacgtattttgtcgttgtatgctattaacttgggt 6358774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 3309073 - 3309193
Alignment:
Q  11 agaagcataggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| |||||| | |||| ||| |||| |||||||||| ||||| ||||||| ||||||||| ||||||||||||| || | ||||| ||| ||||    
T  3309073 agaagcatgggtattctggtgatttatatttcatcatattatttgtagtcattttgccgttgtatgctattaacttgggtgctgtgagtttattcgcaga 3309172  T
Q  110 ttcatcttttacgtttgtagc 130  Q
    |||| | | ||||||| ||||    
T  3309173 ttcaccctatacgtttttagc 3309193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 18107722 - 18107646
Alignment:
Q  11 agaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    ||||||||  |||||||| ||||||||| || |||||||||| |||||||||||||||||| ||| |||||||||||    
T  18107722 agaagcatgtgtatttcgatgacttagaattaatcatattatttgtaggcattttgtcgttttatattattaacttg 18107646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 19028886 - 19028755
Alignment:
Q  11 agaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| | ||||||| | ||||||||||||||||| ||| |||||||||||| ||||| |||| |||||||||| ||  | | || |||||| || |    
T  19028886 agaagcatggatatttcggtaacttagattttatcatactatttgtaggcattttttcgttttatgctattaacttgagtgttgtgagattgttcgcaaa 19028787  T
Q  110 ttcatcttttacgtttgtagcaatctttgtat 141  Q
    |||| ||||||| ||| || |||| |||||||    
T  19028786 ttcaccttttacatttttaacaatatttgtat 19028755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 24461589 - 24461691
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||||||| |||||||| | |||||| ||||||||||| |||| ||||||||| |||  | | ||||||||| ||| |||||| ||||||||| |    
T  24461589 gtgatttagatttcatcatattttttgtaggtattttgtcgttatatgctattaactttggtgttgtgagtttgttcgcaggttcatcctttacgttttt 24461688  T
Q  128 agc 130  Q
    |||    
T  24461689 agc 24461691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 33760147 - 33760045
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||||  |||||||||||| |||||||||||||  |||||| | |||||||||| || || | ||||||||  |||| ||||| ||||||||| |    
T  33760147 gtgacttagaacttatcatattatttgtaggcattttgctgttgtaagctattaacttgtgtgctgttagtttgtttacagactcatcctttacgttttt 33760048  T
Q  128 agc 130  Q
    |||    
T  33760047 agc 33760045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 36943084 - 36942919
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    ||||||||| ||||||  ||||||||||||||| |||||||||| || || |||||| ||||||  ||||| || | ||| ||||| |||||||| | ||    
T  36943084 ggtatttcggtgacttgaattttatcatattatttgtaggcattatgccg-tgtatgctattaatctgggtgctgtgagtatgttcgcagattcaccctt 36942986  T
Q  119 tacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||||||| |||| || ||||||| ||||| | |  ||  || | || ||||||||||||||||||||    
T  36942985 tacgtttttagcgatgtttgtatctgatgtactctattgatttgaatgaatgaatatcgttttgttt 36942919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 10929811 - 10929967
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||| ||||||||||||||| | |||||||||||| |||| ||| ||||||||||| | || | ||||||||  || ||||| | |||| |||| |    
T  10929811 gtgatttaaattttatcatattatttataggcattttgttgttgaatgctattaacttggatgctgtgagtttgtttgcatattcaccctttatgttttt 10929910  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| ||| |||  ||||||  |||  |||||| | |||||||||||||| ||||||||    
T  10929911 agcgatc-ttgattttgatatattctatcaatttgaacgaatgaatatctttttgttt 10929967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 23933573 - 23933512
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    |||| ||||||||||||||||||| |||||| |||||| ||||||| | |||||||||||||    
T  23933573 gtgatttagattttatcatattatttgtaggaattttgccgttgtaagctattaacttgggt 23933512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 19062322 - 19062198
Alignment:
Q  13 aagcataggtatttcg-tgacttagattttatcatattatct-----gtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctc 106  Q
    |||||| ||||||||| |||||||  |||||||||||||| |     |||||||||||| ||||||||| |||||||||||||  | | |||||| || |    
T  19062322 aagcatgggtatttcggtgacttaagttttatcatattatttaatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgctcgc 19062223  T
Q  107 agattcatcttttacgtttgtagca 131  Q
    ||||||| | ||||||||| |||||    
T  19062222 agattcaccctttacgtttttagca 19062198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 34128635 - 34128579
Alignment:
Q  31 acttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    |||| |||||||||||||||| | ||||||||||||||  |||||||||||||||||    
T  34128635 acttggattttatcatattatttataggcattttgtcgcagtatgttattaacttgg 34128579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 4264601 - 4264664
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtat 74  Q
    ||||||| ||||||||| ||||||  | ||||||||||||| ||||||||||||||||||||||    
T  4264601 gaagcatgggtatttcgatgacttcaaatttatcatattatttgtaggcattttgtcgttgtat 4264664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 20047016 - 20046913
Alignment:
Q  28 gtgacttagattttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttg 126  Q
    |||||||  |||||||||||| | | |||||||||| ||||||| ||| |||||||||||| | || | | ||||||| |||||||||| |||||||||     
T  20047016 gtgactttaattttatcatatatttttgtaggcattatgtcgttatatcttattaacttggatgctgtgattttgttcgcagattcatcctttacgtttt 20046917  T
Q  127 tagc 130  Q
    ||||    
T  20046916 tagc 20046913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 32448557 - 32448478
Alignment:
Q  41 tatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatctttta 120  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||||| |  | | |||||||||  ||||||||| ||||    
T  32448557 tatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcatagattcatcattta 32448478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 9986267 - 9986173
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| ||||||| |||| ||||||||||| |  | | ||||||||| |||||||||| ||||||||| ||||    
T  9986267 attttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagc 9986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 14416307 - 14416364
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    ||||| |||||||||||||||||  |||||| | |||||| |||||||||||||||||    
T  14416307 gtgacatagattttatcatattaattgtagggagtttgtcattgtatgttattaactt 14416364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 14423476 - 14423558
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttg----tatgttattaacttgggtactttaagtttgttctcagatt 111  Q
    ||||||||||||||||||| | ||||||||||| |||||    ||||||||||||||||||  ||| ||||| ||| ||||||    
T  14423476 ttagattttatcatattatatttaggcattttgccgttgtatatatgttattaacttgggtgttttgagtttattcgcagatt 14423558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 84088 - 84012
Alignment:
Q  54 gtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    ||||||||| || |||| |||| ||||||||||| | || | ||||||||| |||||||||| ||||||||| ||||    
T  84088 gtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttagc 84012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 280977 - 281041
Alignment:
Q  61 ttttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    ||||| ||||||||| ||||||||||||| || | ||||||||| |||||||| | |||||||||    
T  280977 ttttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgttt 281041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 4041537 - 4041429
Alignment:
Q  39 tttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatctttg 138  Q
    ||||||||||||| ||||| |||||||  |||| ||| ||||||||| |||  | | ||||||||| |||||||| | ||||||||| || | || ||||    
T  4041537 tttatcatattatttgtagccattttgctgttgcatgctattaacttaggtgttgtgagtttgttcgcagattcaccctttacgtttttaacgatttttg 4041438  T
Q  139 tatttgatg 147  Q
    ||| |||||    
T  4041437 tatctgatg 4041429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 17151561 - 17151628
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    ||||||||| |||||| || |||||||||||||  ||||| ||||||| |||||||| ||||||||||    
T  17151561 ggtatttcggtgacttggaatttatcatattattagtaggtattttgttgttgtatgctattaacttg 17151628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 31128751 - 31128692
Alignment:
Q  12 gaagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgtt 70  Q
    |||||||  ||||||| |||||||| ||||||||||||||| ||||||||||||| ||||    
T  31128751 gaagcatgagtatttcagtgacttatattttatcatattatttgtaggcattttgccgtt 31128692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 33140582 - 33140625
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttatt 80  Q
    |||| |||||||||| |||||||||||||| |||||||||||||    
T  33140582 atttaatcatattatttgtaggcattttgtggttgtatgttatt 33140625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 39310821 - 39310774
Alignment:
Q  15 gcataggtatttc-gtgacttagattttatcatattatctgtaggcat 61  Q
    |||| |||||||| |||||||||||||||||||||||| |||||||||    
T  39310821 gcatgggtatttcagtgacttagattttatcatattatttgtaggcat 39310774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 8806022 - 8806116
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | ||||||||||||| |||| |||| ||||||||||| |  | | || |||||| |||||||||| ||||||||| ||||    
T  8806022 attttatcatatatttttgtaggcattttgccgttatatgctattaacttggatgttgtgagattgttcgcagattcatcctttacgtttttagc 8806116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 10548342 - 10548392
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    ||||| ||| ||||| | |||||||||||| ||||||||||||||||||||    
T  10548342 attttctcaaattatttataggcattttgttgttgtatgttattaacttgg 10548392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 21570333 - 21570239
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| || ||||||||| ||||||||||  | || ||||||||||| |||||||| | |||| |||| ||||    
T  21570333 attttatcatatatttttgtaggcattatgccgttgtatgctattaacttgaatgctgtaagtttgttcgcagattcagcctttatgtttttagc 21570239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 22538261 - 22538203
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    |||||||| ||||||||||||||| ||||   |||||||||||| ||| ||||||||||    
T  22538261 gtgacttaaattttatcatattatttgtaaatattttgtcgttgcatgctattaacttg 22538203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 4228296 - 4228373
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| ||||||| |||| ||||||||||| |  | | ||||||||| |||||||||| ||||| ||| ||||    
T  4228296 tgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttagc 4228373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 31210577 - 31210524
Alignment:
Q  13 aagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttg 65  Q
    |||||| ||||||||| ||| |||| |||||||||||||| |||||||||||||    
T  31210577 aagcatgggtatttcggtgatttaggttttatcatattatttgtaggcattttg 31210524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 31580563 - 31580486
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| || |||| |||| ||||||||||| |  | | ||||||||| |||||||||| ||||||||| ||||    
T  31580563 tgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcatttacgtttttagc 31580486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 16376094 - 16376170
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattca 113  Q
    ||||||||||||||| ||||| |||||||  ||||||||  |||||||||| |  | | ||||||||| ||||||||    
T  16376094 attttatcatattatttgtagtcattttggtgttgtatgcgattaacttggatgatgtgagtttgttcgcagattca 16376170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 41327898 - 41327942
Alignment:
Q  41 tatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    ||||||||||| ||||||||||||| | ||||||| |||||||||    
T  41327898 tatcatattatttgtaggcattttggcattgtatgctattaactt 41327942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 33053138 - 33052964
Alignment:
Q  12 gaagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| |||||||| ||||||||  |||||||||||||| ||||||||||||| ||||||||| ||||||||||| | || | ||||||||| || ||    
T  33053138 gaagcatgggtatttcagtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatat 33053039  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||||||| ||||||| ||||||||||||| | |  |||||| | || ||||||||||||||||||||    
T  33053038 tcaccctttacgtttttagcaatgtttgtatttgatgtactctatcaatttgaatgaatgaatatcgttttgttt 33052964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 9341594 - 9341447
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatcttt 137  Q
    |||||||||||| | ||||||||||||||||||||||| |||||||||||||  | | ||||||||| |||||||| | ||||||||| ||||||| |||    
T  9341594 ttttatcatattgtttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcaatgttt 9341495  T
Q  138 gtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||| ||||| | |  ||| || | || |||||| |||||||||||||    
T  9341494 gtatctgatgtactctatcgatttgaatgaatgagtatcgttttgttt 9341447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 38 - 146
Target Start/End: Complemental strand, 67944 - 67836
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatcttt 137  Q
    |||||||||||||| | ||||||||||| ||||||||| ||||||||||||| || | ||||||||| |||||||| | ||||||||| ||||||| |||    
T  67944 ttttatcatattatttataggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcaatgttt 67845  T
Q  138 gtatttgat 146  Q
    |||| ||||    
T  67844 gtatctgat 67836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 23128738 - 23128874
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||  |||||||||||||| ||||||||||||| ||||||||| |||||| |||||| || | ||||||||| |||||    
T  23128738 gaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaatttgggtgctgtgagtttgttcgcagat 23128837  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    ||| | ||||| ||| |||| || ||||||| |||||    
T  23128838 tcaccctttacatttttagcgatgtttgtatctgatg 23128874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 181
Target Start/End: Complemental strand, 3913545 - 3913374
Alignment:
Q  11 agaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| ||||||||| ||| |||| |||||||||||||| ||||||||||||| | ||||||| |||||||||||||  | | ||||||||| ||||    
T  3913545 agaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgttgtgagtttgttcgcaga 3913446  T
Q  110 ttcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    | || | ||||||||| |||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||    
T  3913445 tgcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtttt 3913374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 20225971 - 20226090
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  |||||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||| | | ||||||||| || ||    
T  20225971 gaagcatgagtatttcgatgagttagaatttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtattgtgagtttgttcgcaaat 20226070  T
Q  111 tcatcttttacgtttgtagc 130  Q
    ||||| |||| |||| ||||    
T  20226071 tcatcatttatgtttttagc 20226090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 22119955 - 22120074
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  |||||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||| | | ||||||||| || ||    
T  22119955 gaagcatgagtatttcgatgagttagaatttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtattgtgagtttgttcgcaaat 22120054  T
Q  111 tcatcttttacgtttgtagc 130  Q
    ||||| |||| |||| ||||    
T  22120055 tcatcatttatgtttttagc 22120074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 606332 - 606498
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    ||||||||| |||||||  |||||||||||||| ||||||||||||| | ||||||| ||||||||||||| || | ||||||||| |||||||| | ||    
T  606332 ggtatttcggtgacttaagttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctt 606431  T
Q  119 tacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||||||| || | || ||||||| ||||| | |  ||| || | || ||||||||||| ||||||||    
T  606432 tacgtttttaacgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcattttgttt 606498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 29255408 - 29255242
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||    |||||||| |||||||||||||  | | ||||||||| |||||||| |  |    
T  29255408 ggtatttcggtgacttagattttatcatattatttgtaggcatttcactgttgtatgctattaacttgggtgttgtgagtttgttcacagattcacccat 29255309  T
Q  119 tacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||||||| |||| || ||||||||||||| | |  |||||| | |  |||||||||||| |||||||    
T  29255308 tacgtttttagcgatgtttgtatttgatgtactccatcaatttgactgaatgaatatcgctttgttt 29255242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 546173 - 546270
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||| |||||||||| ||||||||||||| ||||||||| ||||||||||||| || | ||||||||| |||||||||| | ||||||| ||||    
T  546173 ttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctatacgtttttagc 546270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 8102868 - 8102965
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    ||||||||||||||||||| ||||||||||||| ||| | ||||||||||||||||| || | ||||||||  |||||||| ||||||||||| ||||    
T  8102868 ttagattttatcatattatttgtaggcattttgccgtggaatgttattaacttgggtgctgtgagtttgtttgcagattcaccttttacgtttttagc 8102965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 14175024 - 14174867
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||  |||||||||||||| ||||||||||||  |||| |||| | |||||||| ||  | | ||||||||| |||||||| ||||||||||| |    
T  14175024 gtgacttatgttttatcatattatttgtaggcatttttccgttttatgctgttaacttgagtgatgtgagtttgttcgcagattcaccttttacgttttt 14174925  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||||| ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  14174924 agcaatgtttgtatctgatgtaatatatcgatttgaatgaatgaatatcgttttgttt 14174867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 14179560 - 14179403
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||  |||||||||||||| ||||||||||||  |||| |||| | |||||||| ||  | | ||||||||| |||||||| ||||||||||| |    
T  14179560 gtgacttatgttttatcatattatttgtaggcatttttccgttttatgctgttaacttgagtgatgtgagtttgttcgcagattcaccttttacgttttt 14179461  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||||| ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  14179460 agcaatgtttgtatctgatgtaatatatcgatttgaatgaatgaatatcgttttgttt 14179403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 12170588 - 12170762
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| ||| |||| ||| |||||||||| |||||||||||||  |||||||| ||||||||||||| || | |||||| || || ||    
T  12170588 gaagcatgggtatttcggtgatttaggtttgatcatattatttgtaggcattttgctgttgtatgctattaacttgggtgctgtgagtttgctcgcatat 12170687  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||| ||| |||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  12170688 tcaccctttacatttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 12170762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 30776782 - 30776902
Alignment:
Q  11 agaagcataggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| |||||| | |||| ||||||||||||||||||| ||||||||||||| ||| | ||| |||||||||||||  | | ||||||||| ||||    
T  30776782 agaagcatgggtattctggtgatttagattttatcatattatttgtaggcattttgccgtggaatgctattaacttgggtgttgtgagtttgttcgcaga 30776881  T
Q  110 ttcatcttttacgtttgtagc 130  Q
    |||| | ||||||||| ||||    
T  30776882 ttcaccctttacgtttttagc 30776902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 14801964 - 14802067
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattca-tcttttacgtttg 126  Q
    |||| |||||||| |||||||||| ||||||||||||| ||||||||| ||||||||||| | || | ||||||||| |||||||| ||| ||||||||     
T  14801964 gtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagattcactctattacgtttt 14802063  T
Q  127 tagc 130  Q
    ||||    
T  14802064 tagc 14802067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 32327170 - 32327016
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||| |||||||||||||| ||||||||||||| |||   ||| ||||||||||||| || | ||||||||| || ||||| | ||||||||| |    
T  32327170 gtgatttaggttttatcatattatttgtaggcattttgccgt---atgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgttttt 32327074  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  32327073 agcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 32327016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 45 - 185
Target Start/End: Complemental strand, 21426622 - 21426482
Alignment:
Q  45 atattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatctttgtatttg 144  Q
    ||||||| ||||| ||||||| ||||||||| ||||||||||||| || | ||||||||| || ||||| | ||||||||| |||| || ||||||| ||    
T  21426622 atattatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcatattcaccgtttacgtttttagcgatgtttgtatctg 21426523  T
Q  145 atgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | |  ||| || | || ||||||||||||| ||||||    
T  21426522 atgtactctatcgatttgaatgaatgaatatcgtgttgttt 21426482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 127789 - 127901
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  |||||||| ||| ||||||||||||||||||| ||||||||||||| |||||  || ||||||||||| | || | ||||||||| || ||    
T  127789 gaagcatgagtatttcggtgatttagattttatcatattatttgtaggcattttgccgttg--tgctattaacttggttgctgtgagtttgttcacatat 127886  T
Q  111 tcatcttttacgttt 125  Q
    ||| |||||||||||    
T  127887 tcaccttttacgttt 127901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 1523527 - 1523606
Alignment:
Q  11 agaagcataggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    |||||||| |||||| | |||| ||||||||||||||||||| ||||||||||||||||| | ||| |||||||||||||    
T  1523527 agaagcatgggtattctggtgatttagattttatcatattatttgtaggcattttgtcgtggaatgctattaacttgggt 1523606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 30894719 - 30894888
Alignment:
Q  11 agaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| ||||||||| ||| |||| |||||||||||||| ||||| |||||||  |||||||| ||| ||||||| | || | ||||| ||  ||||    
T  30894719 agaagcat-ggtatttcgatgaattaggttttatcatattatttgtagtcattttgctgttgtatgctatcaacttggatgctgtgagtttattg-caga 30894816  T
Q  110 ttcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    |||||| ||||||||| |||| || ||||||| ||||| |||  ||| || | || ||||||||||||||||    
T  30894817 ttcatcctttacgtttttagcgatgtttgtatctgatgtattccatcgatttgaatgaatgaatatcgtttt 30894888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 1933645 - 1933548
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||| ||| ||||||||||||||||| || |||||||   |||||||| |||||| || |||||| | ||||||||| |||||||||| |||||||||    
T  1933645 gtgatttatattttatcatattatctatatgcatttttctgttgtatgctattaatttcggtactatgagtttgttcgcagattcatcctttacgttt 1933548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 7515155 - 7514999
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| ||||||||||||   | |||||| ||||||||||| | || | ||||||||| || ||||| | ||||||||| |    
T  7515155 gtgacttaggttttatcatattatttgtaggcatttttctgctgtatgctattaacttggtttctgtgagtttgttcgcaaattcaccctttacgttttt 7515056  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||| ||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  7515055 agcgat-tttatatctgatgcactctatcgatttgaatgaatgaatatcgttttgttt 7514999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 31296957 - 31297113
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||| ||||||||||||| | ||||||||||||||||||||||| |||||| |||| |  ||| ||||||||| ||  |||| | ||||||||| |    
T  31296957 gtgatttatattttatcatattgtttgtaggcattttgtcgttgtatgctattaatttggatgatttgagtttgttcgcattttcaccctttacgttttt 31297056  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| ||  |||  | ||||| |||  |||||| | || ||||||||||||||||||||    
T  31297057 agcgat-gttgattctgatgtattctatcaatttgaatgaatgaatatcgttttgttt 31297113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 32802683 - 32802780
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||||| ||||||||||||||| |||||| ||||| |||||||||| |||||| |||||| || | |||||| || || ||||| | |||||||||    
T  32802683 gtgacttaaattttatcatattatttgtaggtattttatcgttgtatgatattaaattgggtgctgtgagtttgatcgcatattcaccctttacgttt 32802780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 30608477 - 30608409
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||||||  ||||||||| |||||||||||    
T  30608477 ggtatttcggtgacttatattttatcatattatttgtaggcattttaccgttgtatgctattaacttgg 30608409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 29319831 - 29319712
Alignment:
Q  28 gtgacttagattttatcatattatct-gtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttg 126  Q
    ||||||||  |||||||||||||| | ||| |||||||  ||||||||| ||||||||||| |  | | ||||||||| |||||||| |||||||||||     
T  29319831 gtgacttaagttttatcatattattttgtaagcattttaccgttgtatgctattaacttggttgttatgagtttgttcgcagattcaccttttacgtttt 29319732  T
Q  127 tagcaatctttgtatttgat 146  Q
    |||| || ||||||| ||||    
T  29319731 tagcgatgtttgtatctgat 29319712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 29743134 - 29743239
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttg---tatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtt 124  Q
    |||| |||||| |||||||||||| | |||||||||||||||||   |||||||||||||||| |  | | |||||||||||| ||||| | ||||||||    
T  29743134 gtgatttagatcttatcatattatttataggcattttgtcgttgtaatatgttattaacttggttgttgtgagtttgttctcaaattcaccctttacgtt 29743233  T
Q  125 tgtagc 130  Q
    | ||||    
T  29743234 tttagc 29743239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 528303 - 528249
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaa 82  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  528303 gtgatttagattttatcatattatttgtaggtattttgtcgttgtatgctattaa 528249  T

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Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 10228822 - 10228920
Alignment:
Q  28 gtgacttagattttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||||  |||||||||||| | | |||||||||| || |||| |||| ||||||||||| |||| ||||||||||| || ||||||| |||||||||    
T  10228822 gtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtaagtttgttcgcaaattcatcctttacgttt 10228920  T

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Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 13546654 - 13546600
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaa 82  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||||| ||||||    
T  13546654 gtgacttagaatttatcatattatttgtaggtattttgtcgttgtatgctattaa 13546600  T

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Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 34018680 - 34018854
Alignment:
Q  12 gaagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  ||||||| ||||||||  |||||||||||||| ||||||||||||   ||||||| |||||| |||||||  | | |||||||   |||||    
T  34018680 gaagcatgagtatttcagtgacttatgttttatcatattatttgtaggcattttactgttgtatattattatcttgggtgttgtgagtttgtctgcagat 34018779  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    | | | ||||||||| |||| || ||||||| | ||  | |  |||||| |||| ||||||||||||||||||||    
T  34018780 ttaccatttacgtttttagcgatgtttgtatctaatatactctatcaatttaaatgaatgaatatcgttttgttt 34018854  T

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Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 7976157 - 7975989
Alignment:
Q  12 gaagcataggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| |||||| | |||| ||| |||||||||||   | ||||||||||||| ||||||||| ||||||||| |||  | | ||||||||| || ||    
T  7976157 gaagcatgggtattctggtgatttaaattttatcataccgtttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttgttcgcatat 7976058  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttt 180  Q
    ||||| |||| |||| |||||||  |||  | ||||| |||  |||||| |||| |||||||||||||||    
T  7976057 tcatcctttatgtttttagcaat-gttgattctgatgtattctatcaatttaaatgaatgaatatcgttt 7975989  T

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Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 9380142 - 9380219
Alignment:
Q  11 agaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    |||||||| ||||||| | ||| ||||||||||||||||||| |||| |||||||||||||||||  ||||| |||||    
T  9380142 agaagcatgggtattttggtgatttagattttatcatattatttgtatgcattttgtcgttgtattctattatcttgg 9380219  T

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Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 14846174 - 14846113
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    ||||||||| |||||||||||||| |||||||||||||  ||| |||| |||||||||||||    
T  14846174 gtgacttaggttttatcatattatttgtaggcattttgctgttttatgctattaacttgggt 14846113  T

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Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 30493652 - 30493771
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||| | ||| ||| |||||||||| || | ||||||||||||| ||||||||| ||||||| |||||  | | | ||||||| |||||    
T  30493652 gaagcatgggtattttggtgatttatattttatcatgttgtttgtaggcattttgccgttgtatgctattaacctgggtgttgtgaatttgttcgcagat 30493751  T
Q  111 tcatcttttacgtttgtagc 130  Q
    ||| | ||||||||| ||||    
T  30493752 tcaccctttacgtttttagc 30493771  T

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Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 8497137 - 8497214
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| || |||| |||| ||||||||||| | || | ||||||||| |||||||||| ||||||||| ||||    
T  8497137 tgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttagc 8497214  T

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Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 25064405 - 25064482
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| ||||||| |||| ||||||||||| |  | | ||||||||| |||||||||| ||||||||| ||||    
T  25064405 tgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagc 25064482  T

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Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 28981319 - 28981416
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||||||||   |||||| ||||||| |||||||| ||||||||| |||  | | ||||||||| || ||||| | ||||||||| ||||    
T  28981319 ttagattttatcatattgcttgtaggaattttgttgttgtatgctattaactttggtgttgtgagtttgttcacatattcaccctttacgtttttagc 28981416  T

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Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 181
Target Start/End: Original strand, 32060030 - 32060166
Alignment:
Q  45 atattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatctttgtatttg 144  Q
    ||||||| ||||||||||||||| || |||| |||||| |||| |  | ||||||||||| |||||| | | ||||| ||| |||| |  ||||||| ||    
T  32060030 atattatttgtaggcattttgtcattttatgctattaaattggatgttgtaagtttgttcgcagatttaccctttacatttttagcgaagtttgtatctg 32060129  T
Q  145 atgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    ||| | |  |||||| | || ||||||||||||||||    
T  32060130 atgtaatatatcaatttgaatgaatgaatatcgtttt 32060166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 33740484 - 33740408
Alignment:
Q  55 taggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagca 131  Q
    |||||||| || |||| |||| ||||||||||| || | | ||||||||| |||||||||| ||||||||| |||||    
T  33740484 taggcattatgccgttatatgctattaacttggataatgtgagtttgttcgcagattcatcctttacgtttttagca 33740408  T

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Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 4984492 - 4984398
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| ||| ||| |||| ||||||||| | |  | ||||||||||| |||||||||| ||||||||| ||||    
T  4984492 attttatcatatatttttgtaggcattatgttgttatatgctattaacttagatgatgtaagtttgttcgcagattcatcctttacgtttttagc 4984398  T

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Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 12059698 - 12059604
Alignment:
Q  37 attttatcatattatct-gtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    ||||||||||||| | | ||||| ||| ||||||| |||| ||||||||||| |  | | ||||||||| |||||||||| ||||||||| ||||    
T  12059698 attttatcatatttttttgtaggaattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagc 12059604  T

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Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 17237211 - 17237117
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| ||||||| |||| ||||||||||| |  | | ||| ||||| |||||||||| ||||||||| ||||    
T  17237211 attttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtgtgttcgcagattcatcctttacgtttttagc 17237117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 30879662 - 30879612
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    ||||||||||||||| | | || ||||||||||| ||||||||||||||||    
T  30879662 attttatcatattatttattggtattttgtcgttatatgttattaacttgg 30879612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 34185646 - 34185604
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgtt 70  Q
    |||| ||||||||||||||||||| |||||| |||||||||||    
T  34185646 gtgatttagattttatcatattatttgtaggtattttgtcgtt 34185604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 17334922 - 17334999
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| || |||| |||| ||||||||||| |  | | ||||||||| |||||||||| ||||||||| ||||    
T  17334922 tgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacgtttttagc 17334999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 27097595 - 27097498
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||| ||||||||||||||||||||| ||||||||||  |   ||||| |||||||||| ||| | | | ||||||| || |||||  ||||||||||    
T  27097595 gtgatttagattttatcatattatctctaggcattttaccagcgtatgctattaacttgagtattgtgactttgttcacaaattcacattttacgttt 27097498  T

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Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 679251 - 679350
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaa 132  Q
    |||||||||||||||||||  | |  ||||||| ||||||||| ||||||||| |||  | | |||||||||  ||||||| | ||||||||| ||||||    
T  679251 ttagattttatcatattattcgcaaacattttg-cgttgtatgctattaacttaggtgttgtgagtttgttcgtagattcaccctttacgtttttagcaa 679349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 13007347 - 13007521
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||  |||||||||||||| ||||||||||||| ||||||||| ||||||||||||| || | ||||||||  |||||    
T  13007347 gaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagat 13007446  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||||||| |||| || ||||||||||||| | |  |||||| | || ||||||||||||||||||||    
T  13007447 tcaccctttacgtttttagcgatgtttgtatttgatgtactctatcaatttgaatgaatgaatatcgttttgttt 13007521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 9113695 - 9113521
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||||| ||||||| |||||||  |||||||||||||| ||||||||||||  ||||||||| |||||||||||||  | | ||||||||| |||||    
T  9113695 gaagcatagatatttcggtgacttaagttttatcatattatttgtaggcatttttccgttgtatgctattaacttgggtgttctgagtttgttcgcagat 9113596  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||||||| |||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  9113595 tcaccctttacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 9113521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 181
Target Start/End: Original strand, 38597915 - 38598085
Alignment:
Q  12 gaagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| |||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||| || ||    
T  38597915 gaagcatgggtatttcagtgacttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaat 38598014  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    ||| | ||||||||| |||| || ||||||| ||||| | |  |||||| | || ||||||||| ||||||    
T  38598015 tcaccctttacgtttttagcgatgtttgtatctgatgtactctatcaatttgaatgaatgaataacgtttt 38598085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 8088165 - 8088009
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||| ||||||||||| ||||||||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||||||||||| ||| |    
T  8088165 gtgatttagattatatcatattatttgtaggcattttgcctttgtatgctattaacttgggtgttatgagtttgttcgcagattcatcttttaccttttt 8088066  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||||||| ||| || ||||| |||  |||||| | || ||||||||||| ||||||||    
T  8088065 agcaatc-ttgaatctgatgcattctatcaatttgaatgaatgaatatcattttgttt 8088009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 13 - 185
Target Start/End: Original strand, 10722880 - 10723053
Alignment:
Q  13 aagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagatt 111  Q
    |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||  || ||||||||||||||||| ||  | | |||||||||  |||||    
T  10722880 aagcatgggtatttcggtgacttagattttatcatattatttgtaggcatttttccgctgtatgttattaacttgagtgttgtgagtttgttcgtagatt 10722979  T
Q  112 catcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    || | ||||| ||| |||| || ||||||||||||| | |  |||||| | || |||| |||||||||||||||    
T  10722980 caccatttacatttttagcgatatttgtatttgatgtactcgatcaatttgaatgaataaatatcgttttgttt 10723053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 24229737 - 24229580
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||||||| || | ||||||||| ||||||||   ||||||||| |    
T  24229737 gtgacttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcactctttacgttttt 24229638  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||| ||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  24229637 agcgatgtttatatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 24229580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 26878079 - 26877908
Alignment:
Q  11 agaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| ||||||| | ||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||| |  | | ||||||||| ||||    
T  26878079 agaagcatgggtattttggtgacttagattttatcatattatttgtaggcactttgtcgttgtat-ctattaacttggatgttgtgagtttgttcgcaga 26877981  T
Q  110 ttcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttg 182  Q
    |||||| ||||||||| || |||| ||||||| ||||| | |  ||||||   || |||||||||||||||||    
T  26877980 ttcatcctttacgtttttaccaatgtttgtatatgatgtactctatcaattcgaatgaatgaatatcgttttg 26877908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 34945511 - 34945647
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||  |||||||||||||| | ||||||||||||||||||||| |||||||||||||  | | ||||||||| |||||    
T  34945511 gaagcatgggtatttcggtgacttaagttttatcatattatttataggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagat 34945610  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    ||| | ||||||||| |||| || ||||||| |||||    
T  34945611 tcaccctttacgtttttagcgatgtttgtatctgatg 34945647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 26825565 - 26825683
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||  |||||||||||||| ||||||||||||| ||||||||| ||||||||||||| || | |||||||||  ||||||| | ||||||||| |    
T  26825565 gtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgttttt 26825664  T
Q  128 agcaatctttgtatttgat 146  Q
    ||| || ||||||||||||    
T  26825665 agctatgtttgtatttgat 26825683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 14726414 - 14726257
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| |||||||||||||||||| |||  ||||||||||| | || | ||||||||| |||||||| | ||||||||| |    
T  14726414 gtgacttaggttttatcatattatttgtaggcattttgtcgttttataatattaacttggatgctgtgagtttgttcacagattcaccctttacgttttt 14726315  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||  || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  14726314 agtgatgtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttttgttt 14726257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 25980276 - 25980394
Alignment:
Q  12 gaagcataggtatttcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagatt 111  Q
    ||||||| ||||||||||||||||  |||||||||||||| ||||||||||||| |||| |||| |||||||||||||  | | ||||||||  ||||||    
T  25980276 gaagcatgggtatttcgtgacttaagttttatcatattatttgtaggcattttgccgttatatgctattaacttgggtgatgtgagtttgtttgcagatt 25980375  T
Q  112 catcttttacgtttgtagc 130  Q
    || | ||||||||| ||||    
T  25980376 caccctttacgtttttagc 25980394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 38007493 - 38007649
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||| |||||||||||||| ||||||||||||| | || |||| ||||||||||||| || | ||||||||| || ||||| ||||||||||| |    
T  38007493 gtgaattaggttttatcatattatttgtaggcattttgccttt-tatgctattaacttgggtgctgtgagtttgttcacatattcaccttttacgttttt 38007591  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  38007592 agcgatgtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttttgttt 38007649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 13422051 - 13422224
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  |||||||| ||||||| ||||||||||||||| ||||||||||||  |||| |||| ||||||||||| |  | | ||||||||| || ||    
T  13422051 gaagcatgtgtatttcggtgacttatattttatcatattatatgtaggcatttttccgttttatgctattaacttggatgttgtgagtttgttcgcatat 13422150  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||||| ||||||||| |||| || ||||||| ||||| | |  |||||| | || ||||||||||| ||||||||    
T  13422151 tcatcctttacgtttttagcgatgtttgtatatgatgta-tctatcaatttgaatgaatgaatatcattttgttt 13422224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 41630619 - 41630720
Alignment:
Q  11 agaagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    ||||||||  ||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||| |||  | | ||||||||| ||||    
T  41630619 agaagcatgtgtatttccgtgacttagattttatcatattatttgtagacattttgtcgttgtatgctattaacttaggtgttgtgagtttgttcacaga 41630718  T
Q  110 tt 111  Q
    ||    
T  41630719 tt 41630720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 14082366 - 14082230
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| | |  |   ||||||||| |||||    
T  14082366 gaagcatgggtatttcaatgacttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttcgatgatgggagtttgttcgcagat 14082267  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    ||| | |||| |||| |||| || ||||||| |||||    
T  14082266 tcaccctttatgtttttagcgatgtttgtatctgatg 14082230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 11976888 - 11976769
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| ||||||||||||  |||| |||||||||||||||| |  | | ||||||||| |||||||||| ||||| ||| |    
T  11976888 gtgacttaggttttatcatattatttgtaggcattttcccgttttatgttattaacttggatgttgtgagtttgttcgcagattcatcctttacattttt 11976789  T
Q  128 agcaatctttgtatttgatg 147  Q
    ||| || |||| || |||||    
T  11976788 agcgatgtttgcatctgatg 11976769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 6012108 - 6011934
Alignment:
Q  12 gaagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| |||||||| ||||||||  ||| |||||||||| |||||||||| |  |||| |||| |||||||||||||  | | ||||||||| |||||    
T  6012108 gaagcatgggtatttcagtgacttaagtttgatcatattatttgtaggcattctaccgttttatgctattaacttgggtgatgtgagtttgttcgcagat 6012009  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||||||| || | || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  6012008 tcaccctttacgtttttaacgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 6011934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 130
Target Start/End: Complemental strand, 10332495 - 10332398
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||| |||||||| | ||||||||||||||| || |||| |||||||||||||  | | ||||||||| |||||||||| ||||||||| ||||    
T  10332495 ttagatttcatcatattttttgtaggcattttgtctttatatgctattaacttgggtgatgtgagtttgttcacagattcatcctttacgtttttagc 10332398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 37986066 - 37985969
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||||||| ||||||| ||||| ||||| ||||||||||||||||| ||||||||||  |  | | ||||||||  ||||||||||||||||||||    
T  37986066 gtgacttagaatttatcacattatttgtagacattttgtcgttgtatgctattaacttgaatgatgtgagtttgtttgcagattcatcttttacgttt 37985969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 28540877 - 28540757
Alignment:
Q  11 agaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| ||||||| | ||| |||||||| |||||||||| ||||| ||||||  ||||||||| ||||||||||||| || | ||||||||| ||||    
T  28540877 agaagcatgggtattttggtgatttagatttcatcatattatttgtagacatttttccgttgtatgctattaacttgggtgctgtgagtttgttcgcaga 28540778  T
Q  110 ttcatcttttacgtttgtagc 130  Q
    |||| | | ||||||| ||||    
T  28540777 ttcaccctatacgtttttagc 28540757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 181
Target Start/End: Original strand, 6217016 - 6217186
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcatttt-gtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||  |||||||| ||||||| ||||||||||||||| |||||||||||  ||| ||||||| |||||||||| || || | ||||||||| ||||    
T  6217016 gaagcatgtgtatttcggtgacttaaattttatcatattatttgtaggcatttaagtcattgtatgctattaacttgagtgctgtgagtttgttcgcaga 6217115  T
Q  110 ttcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    |||| ||||  ||||| |||  |  ||||||||||||| | |  |||||| | || ||||||||||||||||    
T  6217116 ttcacctttg-cgtttttagtgacgtttgtatttgatgcactatatcaatttgaatgaatgaatatcgtttt 6217186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 11867787 - 11867870
Alignment:
Q  31 acttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcat 114  Q
    ||||||||||||| ||||||| |||||||||||||| |||||||| |||||| ||||||| | | || |||||| |||||||||    
T  11867787 acttagattttattatattatttgtaggcattttgttgttgtatgctattaatttgggtattgtgagcttgttcgcagattcat 11867870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 35850934 - 35851050
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| || ||||| |||| |||| |||| ||||||||||||| |  | ||||||||| || ||||| ||||||||||| |    
T  35850934 gtgacttaggttttatcatattatttgcaggcactttgccgttttatgctattaacttgggtgc--tgagtttgttcacaaattcaccttttacgttttt 35851031  T
Q  128 agcaatctttgtatttgat 146  Q
    ||| || ||||||| ||||    
T  35851032 agcgatgtttgtatctgat 35851050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 39567405 - 39567466
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    |||| |||||||| |||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  39567405 gtgatttagatttcatcatattatttgtagacattttgtcgttgtatgttattaccttgggt 39567466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 14211344 - 14211464
Alignment:
Q  11 agaagcataggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| |||||| | |||| |||||||| |||||||||| ||||||||||||   |||||||| |||||||||||||  | | ||||||||| ||||    
T  14211344 agaagcatgggtattctggtgatttagatttcatcatattatttgtaggcatttttctgttgtatgctattaacttgggtgttgtgagtttgttcgcaga 14211443  T
Q  110 ttcatcttttacgtttgtagc 130  Q
    |||| | | ||||||| ||||    
T  14211444 ttcaccctatacgtttttagc 14211464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 7886862 - 7886776
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtt 124  Q
    |||||||||||| | |||||||||| |   ||| |||| ||||||||||| |||| | ||||||||| |||||||||||||||||||    
T  7886862 ttttatcatattttttgtaggcattattctgttatatgctattaacttggatactgtgagtttgttcacagattcatcttttacgtt 7886776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 20257621 - 20257527
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| ||||||| |||||||||||||||| |  | | ||||||||| |||||||||| ||||||||| ||||    
T  20257621 attttatcatatatttttgtaggcattatgtcgttatatgttattaacttggatgatgtgagtttgttcacagattcatcatttacgtttttagc 20257527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 2979259 - 2979174
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattca 113  Q
    |||| |||||||| |||||||||| |||||||||| || ||||||||| ||||||||||| |  | | ||||||||| ||||||||    
T  2979259 gtgatttagatttcatcatattatttgtaggcattgtgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattca 2979174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 8096451 - 8096338
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||| |||||||||||||| ||||||||||||| | || |||| |||||||||||||  | | ||||||||| || ||||| | ||||| ||| |    
T  8096451 gtgatttaggttttatcatattatttgtaggcattttgccattttatgctattaacttgggtggtgtgagtttgttcgcaaattcaccctttacattttt 8096352  T
Q  128 agcaatctttgtat 141  Q
    ||| || |||||||    
T  8096351 agcgatgtttgtat 8096338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 7247104 - 7247207
Alignment:
Q  28 gtgacttagattttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttg 126  Q
    |||||||  |||||||||||| | | |||||||||| || |||| |||| ||||||||||| | || | ||||||||| |||||||||| |||||||||     
T  7247104 gtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttt 7247203  T
Q  127 tagc 130  Q
    ||||    
T  7247204 tagc 7247207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 24874698 - 24874761
Alignment:
Q  62 tttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    ||||||||||||||||||||||||||||  | | | ||||||| |||||||||| |||||||||    
T  24874698 tttgtcgttgtatgttattaacttgggtgatgtgaatttgttcacagattcatcctttacgttt 24874761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 31391706 - 31391647
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    ||||||||| |||||||||||||| ||||||||||||   |||||||| |||||||||||    
T  31391706 gtgacttaggttttatcatattatatgtaggcatttttctgttgtatgctattaacttgg 31391647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 7241938 - 7242032
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| || |||| |||| ||||||||||| | || | ||||||||| |||||||||| ||||||||| ||||    
T  7241938 attttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttagc 7242032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 7930316 - 7930358
Alignment:
Q  32 cttagattttatcatattatctgtaggcattttgtcgttgtat 74  Q
    ||||| |||||||||||||| ||||||||||||||||||||||    
T  7930316 cttaggttttatcatattatttgtaggcattttgtcgttgtat 7930358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 11192525 - 11192571
Alignment:
Q  39 tttatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    |||||| |||||| |||| ||||||||||||||||||||||||||||    
T  11192525 tttatcgtattatttgtaagcattttgtcgttgtatgttattaactt 11192571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 27266784 - 27266690
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| ||| ||| |||| ||||||||||| | || | ||||||||| |||||||||| ||||||||| ||||    
T  27266784 attttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcatttacgtttttagc 27266690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 35920941 - 35920895
Alignment:
Q  36 gattttatcatattatctgtaggcattttgtcgttgtatgttattaa 82  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  35920941 gattttatcatattatttgtaggcattttgtcattgtatgctattaa 35920895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 8514596 - 8514548
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    ||||||||||||||| ||||   ||||||||||||||||||||||||||    
T  8514596 attttatcatattatttgtaaatattttgtcgttgtatgttattaactt 8514548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 7036338 - 7036413
Alignment:
Q  13 aagcataggtatttcgtg-acttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    |||||| ||||||||| | ||||||||||||||||||| | |||||| ||||||  |||||||| |||||| ||||    
T  7036338 aagcatgggtatttcgaggacttagattttatcatattgtttgtaggaattttgctgttgtatgctattaaattgg 7036413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 13468753 - 13468800
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    |||||||||||||| |||||||||||||||||  |||| |||||||||    
T  13468753 ttttatcatattatgtgtaggcattttgtcgtcatatgctattaactt 13468800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 38711838 - 38711885
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaact 84  Q
    ||||||||||||| |  ||||| |||||||||||||||||||||||||    
T  38711838 attttatcatattgttcgtaggtattttgtcgttgtatgttattaact 38711885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 3271327 - 3271233
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||| ||||| ||||||| |||| ||||||||||| |  | | ||||||||| |||||||||| ||||||||| ||||    
T  3271327 attttatcatatatttttgtaagcattatgtcgttatatgctattaacttggatgttatgagtttgttcgcagattcatcctttacgtttttagc 3271233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 15571621 - 15571778
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtc-gttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttg 126  Q
    |||||||| ||||||||||||||| | ||| ||||||  | |||||||| |||||||||||||  | | |||||||||  |||||  || |||||||||     
T  15571621 gtgacttaaattttatcatattatttatagacatttttccagttgtatgctattaacttgggtgttgtgagtttgttcgtagatttgtcctttacgttt- 15571719  T
Q  127 tagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||  || ||| ||| ||||| | || || ||| |||| ||||||||| ||||||||||    
T  15571720 tagtgatgtttatatctgatgtaatgtattaatttaaatgaatgaataccgttttgttt 15571778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 19121047 - 19121144
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    ||||||||| |||||||||||||| ||||| | |||||   ||||||| |||||| |||| |  | | ||||||||| |||||||| | |||||||||    
T  19121047 gtgacttaggttttatcatattatttgtagacgttttgctcttgtatgatattaatttggatgatgtgagtttgttcgcagattcaccctttacgttt 19121144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 38961573 - 38961622
Alignment:
Q  39 tttatcatattatctgtaggcattttgtcgttgtatgttattaacttggg 88  Q
    ||||||| ||||| | |||||||||||| ||| |||||||||||||||||    
T  38961573 tttatcacattatttataggcattttgttgttttatgttattaacttggg 38961622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 41184344 - 41184271
Alignment:
Q  57 ggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||| || |||| |||| ||||||||||| | || | ||||||||| |||||||||| ||||||||| ||||    
T  41184344 ggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttagc 41184271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 6e-30; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 7883209 - 7883035
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||| ||||||||  ||||||||||||| || | ||||||||| |||||    
T  7883209 gaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgtatcctattaacttgggtgctgtgagtttgttcgcagat 7883110  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||||||| |||| || ||||||| ||||| | |  ||  || | || ||||||||||||||||||||    
T  7883109 tcaccctttacgtttttagcgatgtttgtatctgatgtactctattgatttgaatgaatgaatatcgttttgttt 7883035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 15344446 - 15344555
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| || | ||||||||| |||||||||| ||||||||| |    
T  15344446 gtgatttagattatatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgttttt 15344545  T
Q  128 agcaatcttt 137  Q
    ||| ||||||    
T  15344546 agcgatcttt 15344555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 15433511 - 15433620
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| || | ||||||||| |||||||||| ||||||||| |    
T  15433511 gtgatttagattatatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgttttt 15433610  T
Q  128 agcaatcttt 137  Q
    ||| ||||||    
T  15433611 agcgatcttt 15433620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 15524815 - 15524924
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| || | ||||||||| |||||||||| ||||||||| |    
T  15524815 gtgatttagattatatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgttttt 15524914  T
Q  128 agcaatcttt 137  Q
    ||| ||||||    
T  15524915 agcgatcttt 15524924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 33 - 185
Target Start/End: Complemental strand, 28086758 - 28086606
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaa 132  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||  ||||| | ||||||||| || ||||||| | ||||||| |||| |    
T  28086758 ttagattttatcatattatttgtaggcattttgtcgttgtatgctattaacttaagtactatgagtttgttcacatattcatcatctacgtttttagcga 28086659  T
Q  133 tctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    | ||||||| ||||| | |  |||||| | ||  |||||||||||||||||||    
T  28086658 tgtttgtatctgatgtactatatcaatttgaataaatgaatatcgttttgttt 28086606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 182
Target Start/End: Original strand, 23230764 - 23230935
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||  | | ||||||||| |||||    
T  23230764 gaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagat 23230863  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttg 182  Q
    ||| | |||||  || |||| || ||||||| ||||| | |  ||| || | || |||||||||||||||||    
T  23230864 tcaccatttacacttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttg 23230935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 31013576 - 31013402
Alignment:
Q  12 gaagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  ||||||| ||||||||  |||||||||||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||| |||||    
T  31013576 gaagcatgtgtatttcagtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagat 31013477  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||||||| ||||||| ||||||| ||||| | |  ||| || | || |||||| |||||||||||||    
T  31013476 tcaccctttacgtttttagcaatgtttgtatctgatgtactttatcgatatgaatgaatgactatcgttttgttt 31013402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 18890668 - 18890565
Alignment:
Q  11 agaagcataggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||| |||||||||| | |||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| || | ||||||||| ||||    
T  18890668 agaaacataggtattatggtgatttagattttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcaga 18890569  T
Q  110 ttca 113  Q
    ||||    
T  18890568 ttca 18890565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 31 - 185
Target Start/End: Complemental strand, 9637357 - 9637203
Alignment:
Q  31 acttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||  | | |||||||||  || |||| | ||||||||| |||     
T  9637357 acttaggttttatcatattatttttaggcattttgtcgttgtatgctattaacttgggtgttatgagtttgttcgtagtttcaccatttacgtttttagt 9637258  T
Q  131 aatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
     || ||||||| ||||| | |  |||||| |||| ||||||||||||||||||||    
T  9637257 gatgtttgtatctgatgtactctatcaatttaaatgaatgaatatcgttttgttt 9637203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 45445762 - 45445605
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||||||||||||||||||||||| |||||||||||||| ||| |||| ||||||||||| |  | | ||||||||| || ||||| ||||||||||| |    
T  45445762 gtgacttagattttatcatattatttgtaggcattttgttgttttatgctattaacttggatgttgtgagtttgttcgcatattcaccttttacgttttt 45445663  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    | | || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  45445662 aacgatgtttgtatctgatgtaatccatcgatttgaatgaatgaatatcgttttgttt 45445605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 1236648 - 1236540
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||| ||||||| ||| | ||||||||||| ||||||||| ||||||||||||| || | ||||||||| |||||||||| ||||||||| |    
T  1236648 gtgatttagattatatcatactatttttaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgttttt 1236549  T
Q  128 agcaatctt 136  Q
    |||||||||    
T  1236548 agcaatctt 1236540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 16928717 - 16928589
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||||| | ||||||| |||||||||||||  | | ||||||||| |||||||| | ||    
T  16928717 ggtatttcggtgacttaggttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctt 16928618  T
Q  119 tacgtttgtagcaatctttgtatttgatg 147  Q
    ||||||| |||| || ||||||| |||||    
T  16928617 tacgtttttagcgatgtttgtatctgatg 16928589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 30568271 - 30568115
Alignment:
Q  29 tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgta 128  Q
    |||||||| ||||||||| |||| ||||||||||||| |||| |||| |||||||||||||  | | ||||||||| |||||||| | ||||||||| ||    
T  30568271 tgacttaggttttatcatgttatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgttttta 30568172  T
Q  129 gcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    || || ||||||| ||||| | |  |||||| | || ||||||||||| ||||||||    
T  30568171 gcgatgtttgtatatgatgtaatctatcaatttgaatgaatgaatatcattttgttt 30568115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 8867943 - 8868051
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttat---taacttgggtactttaagtttgttctcagattcatcttttacgtt 124  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||||  | | ||||||||| || ||||| ||||||||||    
T  8867943 gtgatttagattttatcatattatttgtaggcattttgtcgttgtatgttatttataacttgggtggtgtgagtttgttcgcaaattcaccttttacgtt 8868042  T
Q  125 tgtagcaat 133  Q
    | |||||||    
T  8868043 tttagcaat 8868051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 7677234 - 7677121
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||||||| || | | ||||||| ||||||||   ||||||||| |    
T  7677234 gtgacttaggttttatcatattatttgtaagcattttgccgttgtatgttattaacttgggtgctgtgactttgttcacagattcactctttacgttttt 7677135  T
Q  128 agcaatctttgtat 141  Q
    ||| || |||||||    
T  7677134 agcgatgtttgtat 7677121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 41896655 - 41896760
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||  | | ||||||||| |||||||| | | ||||||| |    
T  41896655 gtgatttagatttcatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacgttttt 41896754  T
Q  128 agcaat 133  Q
    ||||||    
T  41896755 agcaat 41896760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 27110416 - 27110325
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatctttt 119  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||| |||||||||||||  | | ||||||||| || |||||||||||    
T  27110416 gtgacttagattttatcatattatttgtagacattttatcgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatctttt 27110325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 147
Target Start/End: Complemental strand, 25191015 - 25190897
Alignment:
Q  29 tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgta 128  Q
    |||||||| |||||||||||||| ||||||||||||    || |||| ||||||||||||| || | ||||||||| |||||||| |||||||| || ||    
T  25191015 tgacttaggttttatcatattatttgtaggcatttttctattttatgctattaacttgggtgctgtgagtttgttcgcagattcaccttttacgatttta 25190916  T
Q  129 gcaatctttgtatttgatg 147  Q
    ||||| ||||||| |||||    
T  25190915 gcaatgtttgtatctgatg 25190897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 5046891 - 5046952
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    |||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  5046891 gtgacttagaatttatcatattatttgtaggcattttatcgttgtatgttattaacttgggt 5046952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 41060230 - 41060117
Alignment:
Q  13 aagcataggtatttcgt-gacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagatt 111  Q
    |||||||| |||||| | |||||||||||||||||||||| ||||| |||||||| |||||||| ||| || ||||||  | | ||||||||| ||||||    
T  41060230 aagcatagatatttcatagacttagattttatcatattatttgtagccattttgttgttgtatgctatcaatttgggtgatgtgagtttgttcgcagatt 41060131  T
Q  112 catcttttacgttt 125  Q
    |||| |||||||||    
T  41060130 catcctttacgttt 41060117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 10377810 - 10377929
Alignment:
Q  12 gaagcataggtatttcgt-gacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| |||||||||  ||||||  |||||||||||||| ||||||||||||| ||||||||| ||||||||||||| || | |||||| || |||||    
T  10377810 gaagcatgggtatttcggcgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgctcgcagat 10377909  T
Q  111 tcatcttttacgtttgtagc 130  Q
    ||| | || |||||| ||||    
T  10377910 tcaccattcacgtttttagc 10377929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 24186628 - 24186493
Alignment:
Q  13 aagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagatt 111  Q
    |||||| |||||||| |||||||| ||||||||||||||| | ||||||||||| ||| ||||  ||||||||| |||  | | ||||||||  ||||||    
T  24186628 aagcatgggtatttcagtgacttaaattttatcatattatttataggcattttgccgtcgtatactattaacttaggtgttatgagtttgttagcagatt 24186529  T
Q  112 catcttttacgtttgtagcaatctttgtatttgatg 147  Q
    |||||||||||||| || | || ||||||| |||||    
T  24186528 catcttttacgtttttatcgatgtttgtatatgatg 24186493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 185
Target Start/End: Complemental strand, 40619022 - 40618867
Alignment:
Q  30 gacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtag 129  Q
    |||||| ||||||||||||||| |||| |||||||| ||||||||| ||||||||||||   | |  |||||||| |||||  |   ||||||||| |||    
T  40619022 gacttaaattttatcatattatgtgtatgcattttgccgttgtatgctattaacttgggggttgtgcgtttgttcgcagatctacaatttacgtttttag 40618923  T
Q  130 caatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    | || ||||||| ||||| |||  |||||| | || ||||||||||||||||||||    
T  40618922 cgatgtttgtatctgatgtattctatcaatttgaatgaatgaatatcgttttgttt 40618867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 14585815 - 14585917
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||||||| |||||||||| ||||||| ||||| ||||||||| ||||||||||||| || | ||||||||| |||||||| | | ||||||| |    
T  14585815 gtgatttagatttcatcatattatttgtaggcgttttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacgttttt 14585914  T
Q  128 agc 130  Q
    |||    
T  14585915 agc 14585917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 33347488 - 33347370
Alignment:
Q  13 aagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagatt 111  Q
    |||||| ||||||||| ||||| ||| ||||||||||||| ||||||||||||||| ||||||| |||||| || |||  | | ||||||||| ||||||    
T  33347488 aagcatgggtatttcggtgactcagaatttatcatattatttgtaggcattttgtcattgtatgctattaaattaggtgttatgagtttgttcgcagatt 33347389  T
Q  112 catcttttacgtttgtagc 130  Q
    || ||||||| ||| ||||    
T  33347388 caccttttacctttttagc 33347370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 43833947 - 43833845
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||| |||||||||||||| ||||||||||||| ||||||||| ||||||||||||| || | ||||||||  |||||||| | ||||| ||| |    
T  43833947 gtgatttagtttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccatttactttttt 43833848  T
Q  128 agc 130  Q
    |||    
T  43833847 agc 43833845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 37971421 - 37971506
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattca 113  Q
    ||||||||| |||||||| ||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||| ||||||||    
T  37971421 gtgacttaggttttatcacattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattca 37971506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 7198146 - 7198038
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||||||||||||||| || ||| |||||||||||||||| |||||| ||||||  | | ||||| ||| |||||||| | ||||||||| |    
T  7198146 gtgatttagattttatcatattatttgcaggaattttgtcgttgtatgctattaatttgggtgttgtgagtttattcgcagattcaccctttacgttttt 7198047  T
Q  128 agcaatctt 136  Q
    ||| |||||    
T  7198046 agcgatctt 7198038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 17693582 - 17693407
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggca-ttttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||  |||||||| |||||||  |||||||||||||| |||||||| |||||| |||||||||||||||||||| |  | | |||||| ||  |||    
T  17693582 gaagcatgagtatttcgatgacttatgttttatcatattatttgtaggcatttttgttgttgtatgttattaacttggatgttgtgagtttggtcgtaga 17693483  T
Q  110 ttcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||||   ||||| ||| |||| || ||||||||||||| | |  |||||| | |  ||||||||||||||||||||    
T  17693482 ttcactctttacatttttagcgatgtttgtatttgatgtactctatcaatttgagtgaatgaatatcgttttgttt 17693407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 20553209 - 20553134
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    |||||||  |||||||| |||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||||    
T  20553209 gaagcatgagtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttg 20553134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 16247191 - 16247113
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    ||||||| ||||||||| |||||||||||| |||||||||| || |||||||||| ||||||||| |||||||| ||||    
T  16247191 gaagcatgggtatttcgctgacttagatttgatcatattatttgaaggcattttgccgttgtatgctattaactcgggt 16247113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 29617225 - 29617168
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||| |||||||||    
T  29617225 gtgatttagattttatcatattatttgtaggcattttgttgttgtatgctattaactt 29617168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 14916134 - 14916042
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    ||||||||||||||||| | |||||||||||||  |||||||| |||||||||| || | || ||||| ||| |||||||| | |||||||||    
T  14916134 ttagattttatcatattgtttgtaggcattttgcagttgtatgctattaacttgagtgcattgagttttttcgcagattcaccatttacgttt 14916042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 42046341 - 42046461
Alignment:
Q  11 agaagcataggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| |||||| | |||| |||||||| |||||||||| ||||||||||||| | | ||||| |||||||||||||  | | ||||||||| ||||    
T  42046341 agaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgacatcgtatgctattaacttgggtgttgtgagtttgttcgcaga 42046440  T
Q  110 ttcatcttttacgtttgtagc 130  Q
    |||| | | ||||||| ||||    
T  42046441 ttcaccctatacgtttttagc 42046461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 471112 - 471054
Alignment:
Q  33 ttagattttatcatattatctgtaggca--ttttgtcgttgtatgttattaacttgggt 89  Q
    ||||||||||||||||||| ||||||||  |||||||| ||||||||||||||||||||    
T  471112 ttagattttatcatattatttgtaggcattttttgtcgatgtatgttattaacttgggt 471054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 20559712 - 20559637
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    |||||||  |||||||| |||||||| |||||||||||||| ||| ||||||||| ||||||||| ||||||||||    
T  20559712 gaagcatgagtatttcggtgacttaggttttatcatattatttgtgggcattttgccgttgtatgctattaacttg 20559637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 20571274 - 20571199
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    |||||||  |||||||| |||||||| |||||||||||||| ||| ||||||||| ||||||||| ||||||||||    
T  20571274 gaagcatgagtatttcggtgacttaggttttatcatattatttgtgggcattttgccgttgtatgctattaacttg 20571199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 3673562 - 3673736
Alignment:
Q  12 gaagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  ||||||| ||||||||  ||| |||||||||| ||||||||||||| ||||||||  ||||||||||| | || | ||||||||  ||| |    
T  3673562 gaagcatgagtatttcagtgacttaagtttaatcatattatttgtaggcattttgccgttgtatcctattaacttggatgctgtgagtttgtttgcagtt 3673661  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||||||| ||||  | ||| ||| |  || |||  |||||| | || ||||||||||||||||||||    
T  3673662 tcaccctttacgtttttagcgttgtttatatctagtgtattatatcaatttgaatgaatgaatatcgttttgttt 3673736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 34493140 - 34493198
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    |||| ||||||||||| ||||||| | ||||||||||||||||| ||||||||||||||    
T  34493140 gtgaattagattttatgatattatatataggcattttgtcgttgcatgttattaacttg 34493198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 1239348 - 1239287
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    |||| ||||||| ||||||| ||| ||||||||||||| ||||||||| |||||||||||||    
T  1239348 gtgatttagattatatcatactatttgtaggcattttgacgttgtatgctattaacttgggt 1239287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 28897848 - 28897929
Alignment:
Q  29 tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||||||||||||||||||| ||||| ||||||||| || |||| ||||||| |||||  | | ||||||||| |||||    
T  28897848 tgacttagattttatcatattatttgtagtcattttgtcattctatgctattaacgtgggtgttgtgagtttgttcgcagat 28897929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 29939438 - 29939495
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||||||||| |||||||||    
T  29939438 gtgacttaggttttatcatattatttgtagtcattttgccgttgtatgatattaactt 29939495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 41684504 - 41684556
Alignment:
Q  13 aagcataggtatttcg-tgacttagattttatcatattatctgtaggcatttt 64  Q
    |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||    
T  41684504 aagcatgggtatttcgatgacttagattttatcatattatttgtaggcatttt 41684556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 14906848 - 14906754
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| ||| ||| |||| ||||||||||| | || | ||||||||| |||||||||| ||||||||| ||||    
T  14906848 attttatcatatatttttgtaggcattatgttgttatatgctattaacttggatcctgtgagtttgttcgcagattcatcctttacgtttttagc 14906754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 27498326 - 27498256
Alignment:
Q  20 ggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    |||||||| |||| ||||||||||||||||||| | ||| ||||||||| || |||||||| |||||||||    
T  27498326 ggtatttcagtgatttagattttatcatattatttatagacattttgtctttatatgttatgaacttgggt 27498256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 29777398 - 29777472
Alignment:
Q  56 aggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    ||||||| ||||||| |||| ||||||||||| | || | ||||||||| |||||||||| ||||||||| ||||    
T  29777398 aggcattatgtcgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttagc 29777472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 33214621 - 33214520
Alignment:
Q  29 tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgta 128  Q
    |||||||  |||||||||||||| | ||| ||||||| |||| |||| ||||||||| ||| || | |||||||||  ||||||| | ||||||||| ||    
T  33214621 tgacttatgttttatcatattatttttagacattttgccgttttatgctattaactttggtgctgttagtttgttcgtagattcaccctttacgttttta 33214522  T
Q  129 gc 130  Q
    ||    
T  33214521 gc 33214520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 40211270 - 40211094
Alignment:
Q  12 gaagcataggtatttcgt-gacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  ||||||||| ||||| |||||||||||||||| |||| ||||| || ||||||||| ||||||  |||||  | | |||||||||  ||||    
T  40211270 gaagcatgagtatttcgttgacttggattttatcatattatttgtaagcattatgccgttgtatgctattaatctgggtgatgtgagtttgttcgtagat 40211171  T
Q  111 tcatctttta--cgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||  ||||| |||| || ||| ||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  40211170 tcaccctttacgcgtttttagcgatgtttatatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 40211094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 39657574 - 39657638
Alignment:
Q  11 agaagcataggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtat 74  Q
    |||||||| |||||| | |||| |||||||| |||||||||| ||||||||||||| ||||||||    
T  39657574 agaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgccgttgtat 39657638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 429039 - 428984
Alignment:
Q  31 acttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    |||| |||||||||||||||| | || ||||||| |||||||||||||||| ||||    
T  429039 actttgattttatcatattatttataagcattttttcgttgtatgttattaccttg 428984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 35283311 - 35283256
Alignment:
Q  31 acttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    ||||||||||||||||||||| ||||   ||||| |||||||||| ||||||||||    
T  35283311 acttagattttatcatattatttgtatatattttatcgttgtatgctattaacttg 35283256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 11267167 - 11267261
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| || |||| |||| ||||||||||| | || | ||||||||| ||| |||||| ||||||||| ||||    
T  11267167 attttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagtttcatcctttacgtttttagc 11267261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 26469097 - 26469055
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgtt 70  Q
    |||| ||||||||||||||||||| |||||| |||||||||||    
T  26469097 gtgatttagattttatcatattatttgtaggtattttgtcgtt 26469055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 9498507 - 9498430
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| || | || |||| ||||||||||| | || | ||||||||| |||||||||| ||||||||| ||||    
T  9498507 tgtaggcattatgccattatatgctattaacttggatgctgtgagtttgttcacagattcatcctttacgtttttagc 9498430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 11725856 - 11725933
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| || |||| |||| ||||||||||| |  | | ||||||||| |||||||||| ||||||||| ||||    
T  11725856 tgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcacagattcatcctttacgtttttagc 11725933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 25238535 - 25238486
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    ||||||||||||||| | ||| ||||||| ||||||||||||| ||||||    
T  25238535 attttatcatattatttatagacattttgccgttgtatgttataaacttg 25238486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 39646139 - 39646078
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    |||||||| |||| |||||||||| |||||  ||||||| ||| |||||| |||||||||||    
T  39646139 gtgacttaaatttaatcatattatttgtagctattttgttgttatatgttgttaacttgggt 39646078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 44578189 - 44578278
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||||||||| | | |||||||||| ||||||| |||| ||||||||||| |  | |||||||| || |||||||||| ||| |||||    
T  44578189 attttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtaagtttgatcacagattcatcctttgcgttt 44578278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 8826359 - 8826407
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttg 86  Q
    |||||||||||||  |||||||||||| |||||| ||| ||||||||||    
T  8826359 ttttatcatattacttgtaggcattttatcgttgcatgctattaacttg 8826407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 14913235 - 14913279
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttatta 81  Q
    ||||||||||||||| |||||| |||||| ||||||||| |||||    
T  14913235 attttatcatattatttgtaggtattttgccgttgtatgctatta 14913279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 1e-27; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 11462444 - 11462278
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    ||||||||| |||||||  |||||||||||||| |||||| |||||||||||||||| ||||||||||||| || | |||||||||  ||||||| | ||    
T  11462444 ggtatttcggtgacttaagttttatcatattatttgtaggaattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccatt 11462345  T
Q  119 tacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||||||| |||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  11462344 tacgtttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgttt 11462278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 50377462 - 50377619
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||| ||   ||||||||| ||  |||||| ||||||||| |    
T  50377462 gtgacttagattttatcatattgtctgtaggcatttttccgtcgtatgttattaacttgggtgctgagagtttgttcgcaatttcatcctttacgttttt 50377561  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||| ||| ||||| ||   |||||| | || ||||||||||||||||||||    
T  50377562 agcgatgtttatatctgatgtatcttatcaatttgaatgaatgaatatcgttttgttt 50377619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 4413253 - 4413410
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| |||||||||||||  |||||||| |||||| ||| || || | | ||||||| |||||||||| ||||||||| |    
T  4413253 gtgacttaggttttatcatattatttgtaggcattttgctgttgtatgctattaaattgagtgctgtgaatttgttcacagattcatcctttacgttttt 4413352  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||||||| ||||| | |  ||| || | ||||||| |||||||||||||||    
T  4413353 agcgatgtttgtatctgatgtactctatcgatttgaacgaataaatatcgttttgttt 4413410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 34878231 - 34878074
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| ||||||||||||| |||| |||| |||||||||||||  | | ||||||||| |||||||| ||||||||||| |    
T  34878231 gtgacttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcacagattcaccttttacgttttt 34878132  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || |||  || ||||| | |  ||| || | || ||||||||||||||||||||    
T  34878131 agcgatgtttccatctgatgtaatctatcgatttgaatgaatgaatatcgttttgttt 34878074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 24583089 - 24583197
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||| |||||||||| ||||||||| |    
T  24583089 gtgatttagattatatcatattatttgtaggcattttgccgttgtatgatattaacttgggtgatgtgagtttgttcacagattcatcctttacgttttt 24583188  T
Q  128 agcaatctt 136  Q
    ||| |||||    
T  24583189 agcgatctt 24583197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 44543411 - 44543519
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||| ||||||||||| ||||||||||||| |||| |||| ||||||||||||| || | ||||||||| |||||||||| ||||||||| |    
T  44543411 gtgatttagattatatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgttttt 44543510  T
Q  128 agcaatctt 136  Q
    ||| |||||    
T  44543511 agcgatctt 44543519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 15431619 - 15431500
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||| |||||||||||||||||| ||||| |||||| |||||||||| |||| |||||| |  | | ||||||||| |||||||||| ||||||||| |    
T  15431619 gtgacatagattttatcatattatttgtagacattttatcgttgtatgctattcacttggatgttgtgagtttgttcgcagattcatcctttacgttttt 15431520  T
Q  128 agcaatctttgtatttgatg 147  Q
    |||||| ||||||| |||||    
T  15431519 agcaatgtttgtatctgatg 15431500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 7836749 - 7836652
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    ||||||||| |||||||||||||| ||||||||||||| |||| |||| ||||||||||||| || | ||||||||| |||||||||| |||| ||||    
T  7836749 gtgacttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttatgttt 7836652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 21687521 - 21687674
Alignment:
Q  32 cttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagca 131  Q
    ||||| |||||||||||||| |||||||||||| ||||| |||| |||||| ||||||  | | ||||||||  |||||||| ||||||||||| ||||     
T  21687521 cttaggttttatcatattatttgtaggcattttctcgttttatgctattaatttgggtgttgtgagtttgttagcagattcaccttttacgtttctagcg 21687620  T
Q  132 atctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    || ||||||| ||||| | |  ||| || | || ||||||||||||||||||||    
T  21687621 atgtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttttgttt 21687674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 24583285 - 24583393
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||| |||||||||| ||||| ||| |    
T  24583285 gtgatttagattatatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcagattcatcctttacattttt 24583384  T
Q  128 agcaatctt 136  Q
    ||| |||||    
T  24583385 agcgatctt 24583393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 31984283 - 31984419
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||| |||||||||||||| | || |||||||||||||||||| |||||||||||||  | | | ||||||| |||||    
T  31984283 gaagcatgggtatttcggtgacttaggttttatcatattatttttaagcattttgtcgttgtatgctattaacttgggtgttgtgactttgttcgcagat 31984382  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    | | | ||||||||| || |||| | |||||||||||    
T  31984383 ttaccctttacgtttttaacaatgtgtgtatttgatg 31984419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 45415680 - 45415816
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||| ||||||||  |||||| ||||||  | | ||||||||| || ||    
T  45415680 gaagcataggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgtataatattaatttgggtgttgtgagtttgttcgcatat 45415779  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    ||| | ||||||||| |||| || | ||||| |||||    
T  45415780 tcaccctttacgtttttagcgatatgtgtatatgatg 45415816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 5983958 - 5984036
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    ||||||| ||||||||| |||||||  |||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  5983958 gaagcatgggtatttcggtgacttatgttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggt 5984036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 16989510 - 16989667
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||| |||||||||||||| ||||||||||||| |||| |||| ||||||||||||| || | ||||||||  |||||| | | ||||||||| |    
T  16989510 gtgacttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgtttgcagatttaccatttacgttttt 16989609  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||  || ||||||| ||||| | |  ||| || | || ||||||| ||||||||||||    
T  16989610 agtgatgtttgtatatgatgtaatctatcgatttgaatgaatgaaaatcgttttgttt 16989667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 13 - 185
Target Start/End: Original strand, 32395121 - 32395293
Alignment:
Q  13 aagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagatt 111  Q
    |||||| ||||||||| |||||||  |||||||||||||| | ||||||||||| || |||||| ||||||||||||| || ||||||||||| | ||||    
T  32395121 aagcatgggtatttcggtgacttaagttttatcatattatttataggcattttgccgctgtatgctattaacttgggtgctgtaagtttgttcgc-gatt 32395219  T
Q  112 catcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    || | ||||||||| || |  | ||||||||||||| | |  ||| || | || | ||||||||||||||||||    
T  32395220 caccctttacgtttttaacggtgtttgtatttgatgtactctatcgatttgaatggatgaatatcgttttgttt 32395293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 44915782 - 44915931
Alignment:
Q  32 cttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagca 131  Q
    |||||||||||||||||||| ||||||||||||| ||||||||| |||  ||||||||  | | ||||||||| || ||||||| ||||||||| |||      
T  44915782 cttagattttatcatattatttgtaggcattttgccgttgtatgctatcgacttgggtgatgtgagtttgttcgcatattcatcctttacgtttttagtg 44915881  T
Q  132 atctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    || ||||||| ||||| | |  |||||| | || ||||||||||| ||||    
T  44915882 atgtttgtatctgatgtactctatcaatttgaatgaatgaatatcatttt 44915931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 19061048 - 19061156
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| ||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||||| |  | | ||||||||| || |||||||||||| |||| |    
T  19061048 gtgatttagattatatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcacattcatcttttatgttttt 19061147  T
Q  128 agcaatctt 136  Q
    ||| |||||    
T  19061148 agcgatctt 19061156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 34413063 - 34412943
Alignment:
Q  11 agaagcataggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    |||||||| |||||| | |||| |||||||| |||||||||| |||||||||||||  ||||||||||||||||||||||  | | ||||||||| ||||    
T  34413063 agaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgcggttgtatgttattaacttgggtgttgtgagtttgttcgcaga 34412964  T
Q  110 ttcatcttttacgtttgtagc 130  Q
    |||| | | ||||||| ||||    
T  34412963 ttcaccctatacgtttttagc 34412943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 14489411 - 14489473
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggta 90  Q
    |||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||    
T  14489411 gtgatttagattttatcatattatttgtaggtattttgttgttgtatgttattaacttgggta 14489473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 14872761 - 14872863
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||| | |||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||||| | || | ||||||||| || ||    
T  14872761 gaagcatgggtattttggtgacttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatat 14872860  T
Q  111 tca 113  Q
    |||    
T  14872861 tca 14872863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 9341865 - 9341962
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||||  ||||||||||  || | | ||||| |||| ||||||| |||||||||||    
T  9341865 gtgacttagattttatcatattatttgtaggtattttgttgttgtatactattaacttgaatattgtgagtttattcttagattcaccttttacgttt 9341962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 18939458 - 18939555
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcatttt-gtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtt 124  Q
    |||||||||| ||||||| ||||| || ||||||||| ||||||||||| ||||||||||| || ||| ||||||||| |||||||| | ||||||||    
T  18939458 gtgacttagaatttatcaaattatttgcaggcatttttgtcgttgtatgctattaacttggataatttgagtttgttcgcagattcaccatttacgtt 18939555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 181
Target Start/End: Complemental strand, 21947571 - 21947418
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||  |||||||||||||| ||||||||||||| |||||||| ||||||||||||||  | | ||||||||| |||||| | | ||||| ||| |    
T  21947571 gtgacttaagttttatcatattatttgtaggcattttgccgttgtattttattaacttgggtgatgtgagtttgttcgcagatttaccctttacattttt 21947472  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    | | || ||||||| ||||| | |  ||| || | || ||||||||||||||||    
T  21947471 aacgatatttgtatatgatgtactctatcgatttgaatgaatgaatatcgtttt 21947418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 31919138 - 31919247
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatcttt 137  Q
    |||||||||||||| ||||| ||||||||||||||||| ||||||||||| |  |   ||||||||| |||||||||| ||||||||| |||| |  |||    
T  31919138 ttttatcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgcgagtttgttcgcagattcatcctttacgtttttagcgaagttt 31919237  T
Q  138 gtatttgatg 147  Q
    |||| |||||    
T  31919238 gtatatgatg 31919247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 35484360 - 35484191
Alignment:
Q  13 aagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagatt 111  Q
    |||||| ||||||||| ||| || | |||||||||||||| |||| |||||||| ||||||||| |||||||||||||  | | ||||||||| ||||||    
T  35484360 aagcatgggtatttcggtgatttcggttttatcatattatttgtaagcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagatt 35484261  T
Q  112 catcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    |  | ||||| ||| |||| || ||||||| ||||| | |  ||| || | || ||||||||||||||||    
T  35484260 cgccctttacatttttagcgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtttt 35484191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 51373811 - 51373750
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    |||||||| ||||||||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  51373811 gtgacttatattttatcatattatttgtaggcattttgtcgtcgtatgctattaacttgggt 51373750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 19596403 - 19596311
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||||| ||||||||||||| |||| |||| ||||||||||| | ||   ||||||||| |||||||| ||||||||||| ||||    
T  19596403 ttttatcatattatttgtaggcattttgccgttttatgctattaacttggatgctacgagtttgttcgcagattcaccttttacgtttttagc 19596311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 36775663 - 36775561
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||||||| |||||||||| ||||||||||||| ||||||||| ||||||||||| |  | | ||||||||| |||||||| | | ||||||| |    
T  36775663 gtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctatacgttttt 36775564  T
Q  128 agc 130  Q
    |||    
T  36775563 agc 36775561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 48750324 - 48750426
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||||||| |||||||||| ||||||||||||| ||||||||| |||||||||||||  | | ||||||||| || ||||| | | ||||||| |    
T  48750324 gtgatttagatttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcaccctatacgttttt 48750423  T
Q  128 agc 130  Q
    |||    
T  48750424 agc 48750426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 27456647 - 27456720
Alignment:
Q  52 ctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||| ||||||||||||||||| |||||||||||||  | | ||||||||| || |||||||||||||||||    
T  27456647 ctgtagacattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcatcttttacgttt 27456720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 47133042 - 47133198
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||||||| |||||||| | ||||||||||||| |||| |||| ||||||||||| |  | | ||||||||| |||||| ||| ||||||||| |    
T  47133042 gtgatttagatttcatcatattttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcagatttatcctttacgttttt 47133141  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| ||  |||  | ||||| |||  |||||| | || ||||||||||||||||||||    
T  47133142 agcgat-gttgattctgatgtattctatcaatttgaatgaatgaatatcgttttgttt 47133198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 3228413 - 3228469
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    |||| |||||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  3228413 ttaggttttatcatattatttgtaggcattttgccgttatatgttattaacttgggt 3228469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 10776432 - 10776312
Alignment:
Q  11 agaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcaga 109  Q
    ||||||||  |||||||| |||||||| ||||||||| |||| |||||||||||||  |||||||  ||||||||||||| || | ||||||||| ||      
T  10776432 agaagcatgagtatttcggtgacttaggttttatcattttatttgtaggcattttgctgttgtattctattaacttgggtgctgtgagtttgttcgcaat 10776333  T
Q  110 ttcatcttttacgtttgtagc 130  Q
    |||| | ||||||||| ||||    
T  10776332 ttcaccctttacgtttttagc 10776312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 185
Target Start/End: Original strand, 12635318 - 12635465
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatctt 136  Q
    ||||||||||||| | |  |||||||||||||||||||| ||||||||||| |  | | |||||||||  ||||||| |||||| |||| |||| ||  |    
T  12635318 attttatcatatttttttaaggcattttgtcgttgtatgctattaacttggatgttgttagtttgttcggagattcaccttttatgtttttagcgat-gt 12635416  T
Q  137 tgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||  | ||||| |||  |||||| |||| ||||||||||||||||||||    
T  12635417 tgattctgatgcattctatcaatttaaatgaatgaatatcgttttgttt 12635465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 16161972 - 16162064
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    ||||||||||||||||||| ||||||||||||| ||| | ||| ||||||||| |||  | | ||||||||| |||||||| | |||||||||    
T  16161972 ttagattttatcatattatttgtaggcattttgccgtggaatgctattaacttaggtgttgtgagtttgttcgcagattcaccctttacgttt 16162064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 29738634 - 29738498
Alignment:
Q  12 gaagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  ||||||| ||||||||| | |||||||||||| | | ||||||| | ||||||||| ||||||||||||| || | |||| |||| |||||    
T  29738634 gaagcatgtgtatttcagtgacttaggtgttatcatattatttattggcatttggccgttgtatgctattaacttgggtgctgtgagttcgttcgcagat 29738535  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    ||| | ||||||||| |||  || ||||||| |||||    
T  29738534 tcaccctttacgtttttagtgatgtttgtatctgatg 29738498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 25406218 - 25406115
Alignment:
Q  28 gtgacttagattttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttg 126  Q
    |||||||  |||||||||||| | | |||||||||| || |||| |||| ||||||||||| | || | ||||||||| ||||||||||||||||||||     
T  25406218 gtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcttttacgtttt 25406119  T
Q  127 tagc 130  Q
    ||||    
T  25406118 tagc 25406115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 39888311 - 39888478
Alignment:
Q  19 aggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatctt 117  Q
    |||||||||| ||||||||||||||||||||| | | || ||||||| |||||||||| ||||||||| | |  | | ||||| ||| ||||||||   |    
T  39888311 aggtatttcggtgacttagattttatcatattctttatatgcattttatcgttgtatgctattaacttagatgttgtgagtttattcgcagattcactct 39888410  T
Q  118 ttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||||||||  ||  || ||||||| ||||| |||  |||||| |  | ||||||||||||||||||||    
T  39888411 ttacgttttgagtgatgtttgtatctgatgtattatatcaatttgtatgaatgaatatcgttttgttt 39888478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 49504538 - 49504391
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatcttt 137  Q
    ||||| |||| ||| | ||||||||||  ||||||||| ||||||||||||| || | ||||||||| |||||||| | ||||||||| || | || |||    
T  49504538 ttttaacataatatttttaggcattttaccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttaacgatgttt 49504439  T
Q  138 gtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||| | ||| | |  ||| || | || ||||||||||||||||||||    
T  49504438 gtatcttatgtactctatcgatttgaatgaatgaatatcgttttgttt 49504391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 51872010 - 51872113
Alignment:
Q  28 gtgacttagattttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttg 126  Q
    |||||||  |||||||||||| | | |||||||||| ||||||| |||| ||||||||||| | || | ||||||||| |||||||||| |||||||||     
T  51872010 gtgactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttt 51872109  T
Q  127 tagc 130  Q
    ||||    
T  51872110 tagc 51872113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 13144765 - 13144651
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||||||||||||||||||| ||| ||||||||||||| | || |||| ||||||||||| |  | | ||||||||| |||||||| | ||||| ||| |    
T  13144765 gtgacttagattttatcataatatttgtaggcattttgccattttatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacattttt 13144666  T
Q  128 agcaatctttgtatt 142  Q
    | | || ||||||||    
T  13144665 aacgatgtttgtatt 13144651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 31317858 - 31317972
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| | ||||||| ||| ||||| ||||||||||||| |||||||||||| |||||| ||  |||||||||||||  | | ||||||||| || ||    
T  31317858 gaagcatggatatttcggtgatttagaatttatcatattatttgtaggcattttatcgttgcatcctattaacttgggtgatgtgagtttgttcgcaaat 31317957  T
Q  111 tcatcttttacgttt 125  Q
    ||| | |||||||||    
T  31317958 tcaccctttacgttt 31317972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 6217778 - 6217717
Alignment:
Q  26 tcgtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    |||||| ||||||||||||||||||| |||||| |||||  ||||||||| |||||||||||    
T  6217778 tcgtgatttagattttatcatattatttgtaggtattttaccgttgtatgctattaacttgg 6217717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 19723469 - 19723558
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||||||||| | | |||||||||| ||||||| |||||||||||||||| | || | ||||| ||| |||||||||| |||||||||    
T  19723469 attttatcatatatttttgtaggcattatgtcgttatatgttattaacttggatgctgtgagtttattcgcagattcatcctttacgttt 19723558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 7337633 - 7337497
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| ||| || | |||||||||||||| |||||||||||||  |||| ||| ||||||||||| |  | | ||||||||| |||||    
T  7337633 gaagcatgggtatttcggtgattttggttttatcatattatttgtaggcattttgctgttgcatgctattaacttggctgttgtgagtttgttcgcagat 7337534  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    ||| | ||||  ||| |||| || ||||||| |||||    
T  7337533 tcaccctttatatttttagcgatgtttgtatctgatg 7337497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 23291595 - 23291519
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttc 104  Q
    ||||||||| |||||||||||||| || ||| |||||| |||| |||| ||||||||||||| || | |||||||||    
T  23291595 gtgacttaggttttatcatattatttggaggtattttgccgttttatgctattaacttgggtgctgtgagtttgttc 23291519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 45789681 - 45789741
Alignment:
Q  29 tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggt 89  Q
    ||||||||| ||||| ||||||| |||||| |||||||| ||||||| |||||||||||||    
T  45789681 tgacttagaatttattatattatttgtaggaattttgtcattgtatgctattaacttgggt 45789741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 4397115 - 4397165
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaacttgg 87  Q
    ||||||||||||||| |||||| ||||||||  ||||||||||||||||||    
T  4397115 attttatcatattatttgtaggtattttgtcactgtatgttattaacttgg 4397165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 9687130 - 9687036
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| ||||||| |||| ||||||||||| |  | | ||||||||| |||||||||| ||||||||| ||||    
T  9687130 attttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcctttacgtttttagc 9687036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 51868570 - 51868476
Alignment:
Q  37 attttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||||| | | |||||||||| || |||| |||||||||||||||| | || | ||||||||| || ||||||| ||||||||| ||||    
T  51868570 attttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgctgtgagtttgttcgcaaattcatcctttacgtttttagc 51868476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 5600924 - 5601009
Alignment:
Q  48 ttatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaat 133  Q
    |||| |||||||||||| ||||||||||||||| | |||| || | | ||||||||| |||||||||  ||||| ||| |||||||    
T  5600924 ttatttgtaggcattttatcgttgtatgttatttatttggatattgtgagtttgttcgcagattcattatttacatttttagcaat 5601009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 8211881 - 8211816
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgt 76  Q
    ||||||| ||||||||  |||||||| |||||||||||||| |||||| ||||||||||| |||||    
T  8211881 gaagcatgggtatttcaatgacttaggttttatcatattatttgtaggtattttgtcgttatatgt 8211816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 26535515 - 26535632
Alignment:
Q  68 gttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacga 167  Q
    |||||||| |||||||||| ||  | | |||||||||  ||||| ||| ||||||||| |||| || ||||||| ||||| | |  |||||| | || ||    
T  26535515 gttgtatgctattaacttgagtgttgtgagtttgttcgtagatttatcatttacgtttttagctatgtttgtatctgatgtactctatcaatttgaatga 26535614  T
Q  168 atgaatatcgttttgttt 185  Q
    ||||||||||||||||||    
T  26535615 atgaatatcgttttgttt 26535632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 27580081 - 27579996
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattca 113  Q
    ||||||||||||||||||||||||   || |||||||| | || |||| |||||||||||||  | | ||||||||| ||||||||    
T  27580081 gtgacttagattttatcatattattcataagcattttgccattttatgctattaacttgggtgttgtgagtttgttcgcagattca 27579996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 34529213 - 34529298
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattca 113  Q
    |||| ||| ||||||||| ||||| |||||||||||| | |||||||  |||||||||||||  | | ||||||||| ||||||||    
T  34529213 gtgatttaaattttatcacattatttgtaggcatttttttgttgtatactattaacttgggtgatgtgagtttgttcgcagattca 34529298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 51916635 - 51916575
Alignment:
Q  12 gaagcataggtatttcgtgacttagattttatcatattatctgtaggcattttgtcgttgta 73  Q
    |||||||  ||||||||||||||||||||||||||| ||| || | ||||||||||||||||    
T  51916635 gaagcatgagtatttcgtgacttagattttatcata-tatttgcatgcattttgtcgttgta 51916575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 25564137 - 25564213
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttc 104  Q
    |||| ||| ||||||| ||||| | |||||  ||||||| |||||||||||||||||||||| || | |||||||||    
T  25564137 gtgatttatattttattatattgtttgtagatattttgttgttgtatgttattaacttgggtcctatgagtttgttc 25564213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 37720097 - 37720005
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    ||||||||||||||||||| ||||||||||||   || | ||| |||||||||||||  | | ||||||||  || ||||| |||||||||||    
T  37720097 ttagattttatcatattatttgtaggcatttttctgtggaatgctattaacttgggtgttgtgagtttgtttgcaaattcaccttttacgttt 37720005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 15492426 - 15492481
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaac 83  Q
    |||| ||||||||||||||||||| |||| |||||||  ||||||||| |||||||    
T  15492426 gtgatttagattttatcatattatttgtatgcattttaccgttgtatgctattaac 15492481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 32679094 - 32679007
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatc 115  Q
    |||| |||||||| |||||||| | ||||||||||||| |||| ||||  |||||||||| |  | | ||||||||| ||||||||||    
T  32679094 gtgatttagatttcatcatattttttgtaggcattttgccgttatatgccattaacttggatgttgtgagtttgttcgcagattcatc 32679007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 50166033 - 50165930
Alignment:
Q  28 gtgacttagattttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttg 126  Q
    |||||||  |||||||||||| | | |||||||||| || |||| |||| ||||||||||| |  | | ||||||||| |||||||||| |||||||||     
T  50166033 gtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcacagattcatcctttacgtttt 50165934  T
Q  127 tagc 130  Q
    ||||    
T  50165933 tagc 50165930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 5701432 - 5701509
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| || |||| |||| ||||||||||| |  | | ||||||||| |||||||||| ||||||||| ||||    
T  5701432 tgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagc 5701509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 7997962 - 7998039
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| || |||| |||||||||||||||| |  | | ||||||||  |||||||||| ||||||||| ||||    
T  7997962 tgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgtttgcagattcatcctttacgtttttagc 7998039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 31837007 - 31837084
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagc 130  Q
    |||||||||| || |||| |||| ||||||||||| |||| | ||||||||| |||||| ||| ||||| ||| ||||    
T  31837007 tgtaggcattatgccgttatatgctattaacttggatactgtgagtttgttcgcagatttatcctttacatttttagc 31837084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 7312014 - 7311942
Alignment:
Q  53 tgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||||||| || |||| |||  ||||||||||| || | ||||||||||| |||||| |||||| ||||||    
T  7312014 tgtaggcattatgccgttatatactattaacttggatattataagtttgttcgcagatttatctttgacgttt 7311942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 28053667 - 28053623
Alignment:
Q  31 acttagattttatcatattatctgtaggcattttgtcgttgtatg 75  Q
    |||| |||||||||||||||| |||||||||||| | ||||||||    
T  28053667 actttgattttatcatattatttgtaggcattttattgttgtatg 28053623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 32873835 - 32873763
Alignment:
Q  11 agaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaa 82  Q
    |||| ||| ||||||||| | |||| |||||||||||||||| ||||| ||| ||||| ||||||| ||||||    
T  32873835 agaaacatgggtatttcgatcactttgattttatcatattatttgtagacatattgtcattgtatgctattaa 32873763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 41740515 - 41740571
Alignment:
Q  29 tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaactt 85  Q
    ||||||| ||||||||||||||| | || ||||| |  |||||||||||||||||||    
T  41740515 tgacttatattttatcatattatttataagcattcttccgttgtatgttattaactt 41740571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 12 - 181
Target Start/End: Complemental strand, 31244 - 31074
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| ||||||||||||||||||||||| | |||||||||||||||||  || ||||| ||||||| || | |||||||||   |||    
T  31244 gaagcatgggtatttcggtgacttagattttatcatattatttataggcattttgtcgttgcttgctattagcttgggtgctgtgagtttgttcgttgat 31145  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgtttt 181  Q
    ||||| |||||||||  ||| || ||||||| ||||| | |  |||||| | || ||||||||||||||||    
T  31144 tcatcctttacgttttaagcgatgtttgtatctgatgtactatatcaatttgaatgaatgaatatcgtttt 31074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 1939 - 1770
Alignment:
Q  16 cataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcat 114  Q
    |||| |||||||| ||| |||| |||||||||||||| |||||||||||||  ||||||||||||||||||||||  | | ||||||||| ||||||||     
T  1939 cataagtatttcggtgatttaggttttatcatattatttgtaggcattttgctgttgtatgttattaacttgggtgttatgagtttgttcgcagattcac 1840  T
Q  115 cttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgtt 184  Q
    | ||||||||| |||| || ||||||  ||||| |||  ||| || | || ||||||||||| |||||||    
T  1839 cctttacgtttttagcgatgtttgtacctgatgcattctatcgatttgaatgaatgaatatcattttgtt 1770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 71270 - 71138
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||| | ||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||||||  | ||||||||||   ||||    
T  71270 gaagcatgggtattttgatgacttagattttattatattatttgtaggcattttgttgttgtatgctattaacttgggtgttgtaagtttgtttgtagat 71171  T
Q  111 tcatcttttacgtttgtagcaatctttgtattt 143  Q
    | ||| ||||||||| |||| || |||||||||    
T  71170 taatcctttacgtttttagcgatgtttgtattt 71138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 32717 - 32581
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    |||||||  |||||||| ||||||||||||||||||||||| |||||||||||||||| |||||  |||||||||| ||  | | ||||||||| |||||    
T  32717 gaagcatgagtatttcggtgacttagattttatcatattatttgtaggcattttgtcgctgtatactattaacttgagtgttgtgagtttgttcccagat 32618  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatg 147  Q
    ||| | ||||||||| |||| || ||||||| |||||    
T  32617 tcaccctttacgtttttagccatgtttgtatctgatg 32581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 71823 - 71704
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    ||||||||  |||||||||||||| ||||||||||||| ||||||||| ||||||||||||| || | |||||||||  ||||||| | ||||||||| |    
T  71823 gtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcggagattcaccctttacgtttct 71724  T
Q  128 agcaatctttgtatttgatg 147  Q
    ||| || ||||||| |||||    
T  71723 agcgatgtttgtatctgatg 71704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 15611 - 15785
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| | ||||||| |||||||| |||||||||||||| ||||||||||||| |||| |||| ||||||||||||| || | ||||||||| |||||    
T  15611 gaagcatggatatttcggtgacttaggttttatcatattatttgtaggcattttgccgttatatgctattaacttgggtgctgtgagtttgttcgcagat 15710  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    |||   |||| |||| |||| || ||||||  ||||| | | |||| || | || |||| |||||||||||||||    
T  15711 tcactctttatgtttttagcgatgtttgtaactgatgtactcaatcgatttgaaggaataaatatcgttttgttt 15785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 66012 - 65838
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| ||||||||| |||||||  |||||||||||||| ||||||||||||||||||||||| |||||||||| ||  | | ||||||||| |||||    
T  66012 gaagcatgggtatttcggtgacttatgttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgagtgttatgagtttgttcgcagat 65913  T
Q  111 tcatcttttacgtttgtagcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| | ||||| ||| || | || ||||||| ||||| | |   ||||| | || |||||||||| |||||||||    
T  65912 tcaccctttacatttttaccgatgtttgtatatgatgtactttttcaatttcaatgaatgaatattgttttgttt 65838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 58041 - 57885
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||||||| |||||||| | ||||||||||||| |||| |||| ||||||||||| | || | ||||||||| |||||| ||| ||||||||| |    
T  58041 gtgatttagatttcatcatattttttgtaggcattttgccgttatatgctattaacttggatgctgtgagtttgttcgcagatttatcctttacgttttt 57942  T
Q  128 agcaatctttgtatttgatgaattgaatcaatctaaacgaatgaatatcgttttgttt 185  Q
    ||| || ||  | | ||||| |||  |||||| |||| ||||||||||||||||||||    
T  57941 agcgatgttaat-tctgatgtattctatcaatttaaatgaatgaatatcgttttgttt 57885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 50895 - 50997
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagat 110  Q
    ||||||| | ||||||| |||||||  |||||||||||||| ||||||||||||| | ||||||| ||||||||||||| || | ||||||||| |||||    
T  50895 gaagcatggatatttcggtgacttaagttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgctgtgagtttgttcgcagat 50994  T
Q  111 tca 113  Q
    |||    
T  50995 tca 50997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 1480 - 1599
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgt 127  Q
    |||| |||| |||||||||||||| ||||||||||||| |||| |||| ||||||||||| |  | | ||||||||  |||||||| | ||||||||| |    
T  1480 gtgatttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttggatgttgtgagtttgtttgcagattcaccctttacgttttt 1579  T
Q  128 agcaatctttgtatttgatg 147  Q
    ||| || ||||||| |||||    
T  1580 agcgatgtttgtatctgatg 1599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 44; Significance: 3e-16; HSPs: 3)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 9985 - 9882
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagcaatcttt 137  Q
    |||||||||||||| ||||||||||||  |||| |||| |||| |||||||| || | ||||||||| |||||||| | ||||||||| |||| || |||    
T  9985 ttttatcatattatttgtaggcatttttccgttttatgctattgacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgttt 9886  T
Q  138 gtat 141  Q
    ||||    
T  9885 gtat 9882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 38183 - 38288
Alignment:
Q  20 ggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttt 118  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||||| || | |||| |||||||||||||  | |  ||||||||  ||||||||| ||    
T  38183 ggtatttcggtgacttagattttatcatattatttgtagggattttg-cgctatatgctattaacttgggtgttatgggtttgttcgtagattcatcatt 38281  T
Q  119 tacgttt 125  Q
    |||||||    
T  38282 tacgttt 38288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 34706 - 34628
Alignment:
Q  37 attttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatc 115  Q
    ||||||||||||||| |||||||||||||| ||||||||   ||||||| | |  | ||||||||||| ||||||||||    
T  34706 attttatcatattatttgtaggcattttgttgttgtatgcctttaacttagatgttgtaagtttgttcgcagattcatc 34628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 5541 - 5639
Alignment:
Q  28 gtgacttagattttatcatat-tatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||||||  |||||||||||| | | |||||||||| || |||| |||| ||||||||||| |||| ||||||||||| || ||||||| |||||||||    
T  5541 gtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtaagtttgttcgcaaattcatcctttacgttt 5639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 36944 - 37021
Alignment:
Q  12 gaagcataggtatttc-gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttggg 88  Q
    ||||||| |||||||| |||| ||||||||||||||||||| |||||| ||||||  ||| |||| ||||||||||||    
T  36944 gaagcatgggtatttcagtgatttagattttatcatattatttgtaggtattttgatgttttatgctattaacttggg 37021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 93243 - 93340
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgttt 125  Q
    |||| ||| ||||||||||||| | |||||||||||||| ||||| || ||||||||||||| || | |  |||||| |||||||| | |||||||||    
T  93243 gtgatttaaattttatcatattgtttgtaggcattttgttgttgtgtgctattaacttgggtgctatgaacttgttcacagattcaccatttacgttt 93340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 1789 - 1725
Alignment:
Q  12 gaagcataggtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatg 75  Q
    ||||||| ||||||||| ||||||| ||||||||||||||| ||||||||||||  |||||||||    
T  1789 gaagcatgggtatttcgatgacttatattttatcatattatttgtaggcattttaccgttgtatg 1725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 1631 - 1577
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaa 82  Q
    |||| ||||||||||||||||||| |||||||||||| ||||| |||| ||||||    
T  1631 gtgatttagattttatcatattatttgtaggcattttatcgttatatgctattaa 1577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 104
Target Start/End: Original strand, 8658 - 8724
Alignment:
Q  38 ttttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttc 104  Q
    |||||||||||||   |||||||||||| ||||||||| |||||| ||||||||| | |||||||||    
T  8658 ttttatcatattaatcgtaggcattttgccgttgtatgctattaagttgggtactgtgagtttgttc 8724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 14831 - 14732
Alignment:
Q  21 gtatttcg-tgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatctttt 119  Q
    |||||||| |||||||||||| |||||||||| |||| ||||||||   || |||| ||||||||||||| || | ||||||||| || ||||||| |||    
T  14831 gtatttcgatgacttagattt-atcatattatttgtatgcattttgctattatatgctattaacttgggtgctgtgagtttgttcgcaaattcatccttt 14733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 133
Target Start/End: Original strand, 7862 - 7957
Alignment:
Q  39 tttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattca-tcttttacgtttgtagcaat 133  Q
    ||||||||||||| |||||| ||||||   |||||||||||||||||||||  | | ||||||||| || |||||  ||| ||||||| |||||||    
T  7862 tttatcatattatttgtagggattttgctattgtatgttattaacttgggtgttgtgagtttgttcgcatattcacccttgtacgtttttagcaat 7957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 6166 - 6259
Alignment:
Q  28 gtgacttagattttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttac 121  Q
    |||| ||||||||||||||||||| ||||| |||||||| |||  | | ||||||||||| |  | | ||||||||  |||||||| |||||||    
T  6166 gtgatttagattttatcatattatttgtagacattttgttgttacaagctattaacttggatgttgtgagtttgtttgcagattcaccttttac 6259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 4313 - 4361
Alignment:
Q  33 ttagattttatcatattatctgtaggcattttgtcgttgtatgttatta 81  Q
    ||||||||||||||||||| ||||| ||||||||| ||| ||| |||||    
T  4313 ttagattttatcatattatttgtagacattttgtcattggatgctatta 4361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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