View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10761_low_15 (Length: 343)
Name: NF10761_low_15
Description: NF10761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10761_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 10076735 - 10076406
Alignment:
| Q |
1 |
gtgatgtctaataacacaattcaatcagccatactaattggatagctcatgatcaagagtaagacatagatagtatacattgatttgtacaactttagga |
100 |
Q |
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| T |
10076735 |
gtgatgtctaataacacaattcaatcagccatactaattggatagctcatgatcaagagtaagacatagatagtatacattgatttgtacaactttagga |
10076636 |
T |
|
| Q |
101 |
agtatgagaaataatcattacaacgaaatcaaaagggaactaatactccttttgaaaacaatttttgcaaatcaaacataagctaac-acaaaaaacatc |
199 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||||| ||| |
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| T |
10076635 |
agtatgagaaataatcattacaacgaaatcaaaaggaaactaatactccttttgaaaacaattttaataaatcaaacataagctaacaaaaaaaaaaatc |
10076536 |
T |
|
| Q |
200 |
aaataattaagaatctaaagaggccatagtttttgtctaaccatcatgttattgtgttcctcctccttcttgtaactttaggccacctctaccgaatgag |
299 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10076535 |
aaagaattaagaatctaaagaggccatagtttttgtctaaccatcatgttattgtgttcctcctccttcttgtaactttaggccacctctaccgaatgag |
10076436 |
T |
|
| Q |
300 |
tgaagacaagcaacactaaacatcaaaagt |
329 |
Q |
| |
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| |||||||||||||||||||||||||||| |
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| T |
10076435 |
taaagacaagcaacactaaacatcaaaagt |
10076406 |
T |
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