View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10761_low_19 (Length: 313)
Name: NF10761_low_19
Description: NF10761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10761_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 24 - 308
Target Start/End: Complemental strand, 4440700 - 4440416
Alignment:
| Q |
24 |
cgtcactcaatttgtctatgttagtaggtgcacttataacaggcctgaatttgttgaatttaattagtctaaagaattagataggatgttaattgttcct |
123 |
Q |
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| T |
4440700 |
cgtcactcaatttgtctatgttagtaggtgcacttataacaggcctgaatttgttgaatttaatttgtctaaagaattagataggatgttaattattcct |
4440601 |
T |
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| Q |
124 |
ggcacaatagcattggcaacaagagaagcaatagtcctacaaagttccaatagggtggagaaatgcattgctttccaatgttcctcaaatgattctcaaa |
223 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4440600 |
ggcacaatagcattggcaacaagagaagcaataatcctacaaagttccaatagggtggagaaatgcattgctttccaatgttcctcaaatgattctcaaa |
4440501 |
T |
|
| Q |
224 |
tgaagggacttgcctcctaagcatggcagtgtggtacatagaagttttctgctaatattgatgtgtttgtggtcgttcatctcac |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
4440500 |
tgaagggacttgcctcctaagcatggcagtgtggtacatagaagttttctgctaatattgatgtgtttgtggtcgttcatgtcac |
4440416 |
T |
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