View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10761_low_22 (Length: 288)
Name: NF10761_low_22
Description: NF10761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10761_low_22 |
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Alignment Details
Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 4625387 - 4625637
Alignment:
| Q |
1 |
atctgattccgaggatgaaccggcgaagtgggaaaagttcaagagaagtcaaattgaaaccatcaataatcgacaaagaaccacctccaaatttgcttcc |
100 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
4625387 |
atctgattccgaggatgaatcggcgaagtgggaaaagttcaagagaagtcaaattgaaatcatcaataatcgacaaagaaccacctccaaatttgcttcc |
4625486 |
T |
|
| Q |
101 |
atcgaagcacgaatttcccaaactcctcctcgtcctcaccgtcgcatcgttagttgcttggtcctccaatcttctcttcacctctttccttcatccatca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4625487 |
atcgaagcacgaatttcccaaactcctcctcgtcctcaccgtcgcatcgttagttgcttggtcctccaatcttctcttcacctctttccttcatccatca |
4625586 |
T |
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| Q |
201 |
accaaacccttttgcgacaccaattcccttcataatcactttcccggtcag |
251 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
4625587 |
accaaacccttctgcgacaccaattcccttcataatcactttcccggtcag |
4625637 |
T |
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