View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10762_low_2 (Length: 251)
Name: NF10762_low_2
Description: NF10762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10762_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 19475089 - 19474854
Alignment:
| Q |
1 |
agagttacttacatgtttgtaagtgttgataatagaatccacaagaattggtttatatgtaccagaagcagaatcaagaccatctaaacatgtgtttttg |
100 |
Q |
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| T |
19475089 |
agagttacttacatgtttgtaagtgttgataatagaatccacaagaattggtttatatgtaccagaagcagaatcaagaccatctaaacatgtgtttttg |
19474990 |
T |
|
| Q |
101 |
ttggttagggctgcactgaggtagattctagcatcagctatgtttcttttgttcgaggaacggattccggataatgatcttttcaatgaagttaaggttg |
200 |
Q |
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| T |
19474989 |
ttggttagggctgcactgaggtagattctagcatcagctatgtttcttttgttcgaggaacggattccggataatgatcttttcaatgaagttaaggttg |
19474890 |
T |
|
| Q |
201 |
attgatgaagttccttgcagtcttgaattgatcctc |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
19474889 |
attgatgaagttccttgcagtcttgaattgatcctc |
19474854 |
T |
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