View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10764_10 (Length: 379)
Name: NF10764_10
Description: NF10764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10764_10 |
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Alignment Details
Target: chr2 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 1 - 359
Target Start/End: Complemental strand, 3292276 - 3291917
Alignment:
| Q |
1 |
gcaagagaagtctttcaacgttggaatataactacgagaattggcctcttaatcaaagactctacttaactatggcaccaattgggaataaattgttttt |
100 |
Q |
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| T |
3292276 |
gcaagagaagtctttcaacgttggaatataactacgagaattggcctcttaatcaaagactctacttaactatggcaccaattgggaataaattgttttt |
3292177 |
T |
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| Q |
101 |
cttggcaggttatagggtaggtggcggcgaattagcaagaacaatgtctgttgttcacgtatttgatacatcggccaccgtggatccttggaagagtttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3292176 |
cttggcaggttatagggtaggtggcggcgaattagcaagaacaatgtctgttgttcacgtatttgatacatcggccaccgtggatccttggaagagtttt |
3292077 |
T |
|
| Q |
201 |
gaaccaatggagttggagggtgaaaaagagctatgcagtcattgttgtgttgtgcaactctcatcaccttaattgattgagagtactacaaggaagaag- |
299 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3292076 |
gaaccaatggagttggagggtgaaaaagagctatgtagtcattgttgtgttgtgcaactctcatcaccttaattgattgagagtactacaaggaagaaga |
3291977 |
T |
|
| Q |
300 |
nnnnnnnncataacgatgtatgtttaattatagattatatgatatgttttatgttgtgat |
359 |
Q |
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|| |||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
3291976 |
aaaaaaaacagaacgatgtatgtttaattatagattatatgatatattttatgttgtgat |
3291917 |
T |
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