View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10764_14 (Length: 325)
Name: NF10764_14
Description: NF10764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10764_14 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 22 - 297
Target Start/End: Complemental strand, 40285055 - 40284760
Alignment:
| Q |
22 |
atcatcagcaaatttatttttggccattttttgtgcttatgcctatattctttaggaaggagtttgaatattttttaaattgtaacttggttaacttgct |
121 |
Q |
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| T |
40285055 |
atcatcagcaaatttatttttggacattttttgtgcttatgcctatattctttaggaaggagattgaatattttttaaattgtaacttggttaacttgct |
40284956 |
T |
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| Q |
122 |
atttgttgcaagcatggtgacagaaaatgttttatatt--------------------taagataagcatgtcatctgcgtttttaggtcaagatcatag |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
40284955 |
atttgttgcaagcatggtgacagaaaatgttttatatttattggactctaagataagataagataagcatgtcatctgcgtttttaggtcaagatcatag |
40284856 |
T |
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| Q |
202 |
gtaatgttcgtctattgctccatccttgtacctaatatggtttttagaaagtttgatcacaccaaagagaatacaaagccaggtaaagggtgaggt |
297 |
Q |
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||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40284855 |
gtaatgttcgtctattgctccatccttgtaccttacatggtttttagaaagtttgatcacaccaaagagaatacaaagccaggtaaagggtgaggt |
40284760 |
T |
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