View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10764_8 (Length: 421)
Name: NF10764_8
Description: NF10764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10764_8 |
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Alignment Details
Target: chr7 (Bit Score: 351; Significance: 0; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 10 - 392
Target Start/End: Original strand, 26879205 - 26879587
Alignment:
| Q |
10 |
tcaaaggggcaaagatccataatacaatagttctgcgacaccttaatactttccctaaccacgctaacaataccaatcagacacagcctgaaaaattgat |
109 |
Q |
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| T |
26879205 |
tcaaaggggcaaagatccataatacaatagttctgcgacaccttaatactttccctaaccacgctaacaataccaatcagacacagcccgaaaaattgat |
26879304 |
T |
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| Q |
110 |
gttctaacctgctccacgctcccaaacacgcatcttcaggtgagaattagaaagaacttgcacaaactctgcacattaaatcacaagacacaatatgagt |
209 |
Q |
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| T |
26879305 |
gttctaacctgctccatgctcccaaacacgcatcttcaggtgagaattagaaagaacttgcacaaactctgcacattaaatcacaagacacaataagagt |
26879404 |
T |
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| Q |
210 |
gaggaattttaacaggatctcagtgatgatccgcgcacatatcagttaggccatttggctctagttcaaggaattaggatagtaggggttgtaaatctgg |
309 |
Q |
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| T |
26879405 |
gaggaattttaacaggatcacagtgatgatccgcgcacatatcagttaggccatttggctctagttcaaggaattagaatagtaggggttgtaaatctgg |
26879504 |
T |
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| Q |
310 |
aagacagtatccagagggaatgaataacacatcaaacctagaggaaaaattgattgaaattgtatgcttctgaacaacggaaa |
392 |
Q |
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| T |
26879505 |
tagacagtatccagggggaatgaataacacatcaaacctagaggaaaaattgattgaaattgtatgcttctgaacaagggaaa |
26879587 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 65 - 216
Target Start/End: Original strand, 40248742 - 40248893
Alignment:
| Q |
65 |
taaccacgctaacaataccaatcagacacagcctgaaaaattgatgttctaacctgctccacgctcccaaacacgcatcttcaggtgagaattagaaaga |
164 |
Q |
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||||||| |||||||||||||||| |||||| ||| ||| | |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
40248742 |
taaccacactaacaataccaatcaaacacagtctggaaattagatgctctaacctgcaccacgctcccaaacacgcatcttcaggtgagaattagaaaga |
40248841 |
T |
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| Q |
165 |
acttgcacaaactctgcacattaaatcacaagacacaatatgagtgaggaat |
216 |
Q |
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| T |
40248842 |
acttgcacaaactctgcacgttaaatcacaagaaacagtaagagtgaggaat |
40248893 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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