View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10765_low_11 (Length: 301)
Name: NF10765_low_11
Description: NF10765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10765_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 11402349 - 11402626
Alignment:
| Q |
1 |
cttgaaaagtcaagtgaacttcaataatattaatgaatccaatcaaatgggagaggacatggaaacttcgatcaaaagagagaacaatttcaatccaaaa |
100 |
Q |
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| T |
11402349 |
cttgaaaagtcaagtgaacttcaataacattaatgaatccaatcaaatgggagaggacatgaaaacttcgatcaaaagagagaacaatttcaatccaaaa |
11402448 |
T |
|
| Q |
101 |
ggtggaaacaattttggttctatcaactatatatggcaaaggaagaagttattacaaccaagagaggagaaattatgttttcaccgcgaaaagtttgagc |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11402449 |
ggtggaaacaattttggttctatcaattatatatggcaaaggaagaagttattacaaccaagagaggagaaattatgttttcaccgcgaaaagtttgagc |
11402548 |
T |
|
| Q |
201 |
gcaaagcagacgattgaagatataaacatcatgcacagattgcagaaaatttagatcaaaacaattgtgagtcttatg |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |
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| T |
11402549 |
gcaaagcagacgattgaagatataaacatcatgcacagattgcaaaaaatttatatcaaaacaattgtgagtcttatg |
11402626 |
T |
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