View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10765_low_7 (Length: 347)
Name: NF10765_low_7
Description: NF10765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10765_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 41297123 - 41296817
Alignment:
| Q |
1 |
tgttgtgagattgaacatctctggatcggaaacaaaaccttggatttgtgtttgaatcgttgggttgtaacaaaatccaccacttgatgttttgtcatct |
100 |
Q |
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| T |
41297123 |
tgttgtgagattgaacatctctggatcggacacaaaaccttggatttgtgtttgaatcgttgggttgtaacaaaatccaccacttgatgttttgtcatct |
41297024 |
T |
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| Q |
101 |
tcatgacaaagttgtctagccatgaataaagattttcaaacttcaatatatctagctatagtttcaaatataaattaagtgaattaatttatattatgag |
200 |
Q |
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| T |
41297023 |
tcatgacaaagttgtctagccatgaataaaaattttcaaacttcaatatatctagctatagtttcaaatataaattaagtgaattaatttatattatgag |
41296924 |
T |
|
| Q |
201 |
gggagcatgagtgtggaagaaagatgagatatagttgctcagaaatagaagatgagatagctagctagagagggtattgatgatgacctccatgctatca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41296923 |
gggagcatgagtgtggaagaaagatgagatatagttgctcagaaatagaagatgagatagctagctagagagggtattgatgatgacctccatgctatca |
41296824 |
T |
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| Q |
301 |
tatactc |
307 |
Q |
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||||||| |
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| T |
41296823 |
tatactc |
41296817 |
T |
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