View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10766_low_5 (Length: 222)
Name: NF10766_low_5
Description: NF10766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10766_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 19 - 203
Target Start/End: Complemental strand, 31525041 - 31524857
Alignment:
| Q |
19 |
gaaccccacccacagtgtgaaacaaaaccaccaatggaaggatgtttcaaaatagtgacttgtggtgcccattcatgaagaaacaaacccacattcttat |
118 |
Q |
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| T |
31525041 |
gaaccccacccacagtgtgaaacaaaaccaccaatggaaggatgtttcaaaatagtgacttgtggtgcccattcatgaagaaacaaacccacattcttat |
31524942 |
T |
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| Q |
119 |
tcttaattctctctacaaacctctcaggtaagtgcttacctatttgatcatcaagttcatcgccaaacccgtcaccactggatcc |
203 |
Q |
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| T |
31524941 |
tcttaattctctctacaaacccctcaggtaagtgcttacctatttgatcatcaagttcatcgccaaacccgtcaccaccggatcc |
31524857 |
T |
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