View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10767_low_15 (Length: 264)
Name: NF10767_low_15
Description: NF10767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10767_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 257
Target Start/End: Original strand, 38831010 - 38831239
Alignment:
| Q |
18 |
ataagaagttcaatttcttataataaacaatcaacaaagggtcttttgaaaagnnnnnnnn-ttaagtaaaagggtttgtaactaattaacaaacatata |
116 |
Q |
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| T |
38831010 |
ataagaagttcaatttcttataataaacaatcaacaaagggtcttttgaaaagaaaaaaaaattaagtaaaagggtttgtaactaattaacaaacatata |
38831109 |
T |
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| Q |
117 |
ccaaattaaatagcaattatatatatagtaactcaccttaacttttctcttcccatgaggattattctttgattgagatgatgattttcttcctttctca |
216 |
Q |
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|||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38831110 |
ccaaattaaatagcaattat-----------ctcaccttcacttttctcttcccatgaggattattctttgattgagatgatgattttcttcctttctca |
38831198 |
T |
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| Q |
217 |
ccttccttaggcaatggattcggcacaacggattcatctct |
257 |
Q |
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| T |
38831199 |
ccttccttaggcaatggattcggcacaacggattcatctct |
38831239 |
T |
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