View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1076_low_8 (Length: 291)
Name: NF1076_low_8
Description: NF1076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1076_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 51 - 230
Target Start/End: Complemental strand, 43102877 - 43102698
Alignment:
| Q |
51 |
cagagaaaaggaaatggcatctgtcctgctatctgcacttcatatagagatattctcaacagaggatattgttaatggttttgtcatgcttctggaaaat |
150 |
Q |
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| T |
43102877 |
cagagaaaaggaaatggcatctgtcctgctatctgcacttcatatagagatattctcaacagaggatattgttaatggttttgtcatgcttctggaaaat |
43102778 |
T |
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| Q |
151 |
gctgaagatacaacgctggatatactggatgcttcaaatgagcttgctctgtttttagctcgggctgtgattgatgatgt |
230 |
Q |
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| T |
43102777 |
gctgaagatacaacgctggatatactggatgcttcaaatgagcttgctctgtttttagctcgggctgtgattgatgatgt |
43102698 |
T |
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