View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10771_low_11 (Length: 241)
Name: NF10771_low_11
Description: NF10771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10771_low_11 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 38736526 - 38736296
Alignment:
| Q |
11 |
cagagatcattgcattccaagaaacatcgtttacatctgtcatgttgttaaacacgttaacagaacactcacacattcctaacttcgcatacaagttaag |
110 |
Q |
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| T |
38736526 |
cagaaatcattgcattccaagaaacatcgtttacatctgtcatgttgttaaacacgttaacagaacactcacacattcctaacttcgcatacaagttaag |
38736427 |
T |
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| Q |
111 |
aagagatgtcccaacaacagcatgcataagaaaacccctaacaacaacttgggcatgaaccatctcaccaaacacaacagaatctaacccaacacaagac |
210 |
Q |
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| T |
38736426 |
aagagatgtcccaacaacagcatgcataagaaaacccctaacaacaacttgggcatgaaccatctcaccaaacacaacagaatctaacccaacacaagac |
38736327 |
T |
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| Q |
211 |
tgcaaaacagcagagaaagcaaacccatcaa |
241 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
38736326 |
tgcaaaacagcagagaaagcaaacccatcaa |
38736296 |
T |
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