View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10771_low_2 (Length: 498)

Name: NF10771_low_2
Description: NF10771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10771_low_2
NF10771_low_2
[»] chr8 (26 HSPs)
chr8 (26-498)||(33922104-33922562)
chr8 (18-66)||(16024150-16024198)
chr8 (17-61)||(2248454-2248498)
chr8 (26-61)||(43732681-43732716)
chr8 (21-59)||(7394663-7394701)
chr8 (19-61)||(13404978-13405020)
chr8 (20-61)||(8815342-8815383)
chr8 (20-61)||(12022344-12022385)
chr8 (20-61)||(31543273-31543314)
chr8 (20-61)||(43732888-43732929)
chr8 (25-61)||(3726865-3726901)
chr8 (29-69)||(8815135-8815175)
chr8 (21-61)||(9718681-9718721)
chr8 (17-61)||(30365132-30365176)
chr8 (26-57)||(1281149-1281180)
chr8 (26-61)||(4247727-4247762)
chr8 (20-67)||(11785727-11785774)
chr8 (17-60)||(16024351-16024394)
chr8 (26-61)||(28083744-28083779)
chr8 (26-68)||(2481980-2482022)
chr8 (28-61)||(6315068-6315101)
chr8 (27-68)||(34196515-34196556)
chr8 (20-57)||(36309044-36309081)
chr8 (20-61)||(41103506-41103547)
chr8 (29-61)||(31738633-31738665)
chr8 (17-61)||(43826334-43826378)
[»] chr5 (37 HSPs)
chr5 (20-68)||(5688591-5688639)
chr5 (20-68)||(14245247-14245295)
chr5 (20-61)||(13634713-13634754)
chr5 (20-61)||(13634912-13634953)
chr5 (20-61)||(14245090-14245131)
chr5 (20-61)||(16938481-16938522)
chr5 (20-59)||(2550553-2550592)
chr5 (26-61)||(20147077-20147112)
chr5 (19-61)||(40305865-40305907)
chr5 (20-61)||(1658014-1658055)
chr5 (20-61)||(7544138-7544179)
chr5 (20-61)||(10476229-10476270)
chr5 (20-61)||(11437143-11437184)
chr5 (28-61)||(15986833-15986866)
chr5 (20-61)||(26414895-26414936)
chr5 (26-58)||(11436944-11436976)
chr5 (28-60)||(14681473-14681505)
chr5 (20-68)||(15986619-15986667)
chr5 (26-66)||(40305667-40305707)
chr5 (26-61)||(10204578-10204613)
chr5 (26-61)||(10476028-10476063)
chr5 (30-61)||(22022849-22022880)
chr5 (26-61)||(34980812-34980847)
chr5 (31-61)||(9856892-9856922)
chr5 (17-59)||(11756882-11756923)
chr5 (26-60)||(21581154-21581188)
chr5 (20-66)||(42681445-42681491)
chr5 (28-61)||(7544345-7544378)
chr5 (28-69)||(8503038-8503079)
chr5 (17-58)||(36363037-36363078)
chr5 (17-58)||(36363230-36363271)
chr5 (29-58)||(36392359-36392388)
chr5 (24-61)||(40815299-40815336)
chr5 (29-61)||(8551628-8551660)
chr5 (20-60)||(11757104-11757144)
chr5 (33-61)||(16502006-16502034)
chr5 (31-67)||(22023571-22023607)
[»] chr2 (29 HSPs)
chr2 (17-61)||(36347739-36347783)
chr2 (20-67)||(17379842-17379889)
chr2 (20-61)||(35736177-35736218)
chr2 (17-58)||(8427069-8427110)
chr2 (20-61)||(22356205-22356246)
chr2 (20-61)||(23748296-23748337)
chr2 (20-61)||(36046402-36046443)
chr2 (20-61)||(45257309-45257350)
chr2 (21-61)||(16713494-16713534)
chr2 (29-61)||(17380051-17380083)
chr2 (20-56)||(31928250-31928286)
chr2 (17-61)||(36347543-36347587)
chr2 (27-67)||(40022359-40022399)
chr2 (26-69)||(9426979-9427022)
chr2 (26-61)||(42296510-42296545)
chr2 (22-68)||(2380987-2381033)
chr2 (26-60)||(12541773-12541807)
chr2 (30-60)||(36567063-36567093)
chr2 (34-63)||(16565985-16566014)
chr2 (20-61)||(31061361-31061402)
chr2 (20-57)||(31061561-31061598)
chr2 (26-55)||(33265615-33265644)
chr2 (20-61)||(35736388-35736429)
chr2 (20-61)||(41778775-41778816)
chr2 (20-61)||(41841684-41841725)
chr2 (17-61)||(2241413-2241456)
chr2 (21-61)||(3094555-3094595)
chr2 (21-61)||(15224896-15224936)
chr2 (17-61)||(36046206-36046250)
[»] chr4 (36 HSPs)
chr4 (20-61)||(37711140-37711181)
chr4 (17-63)||(2247999-2248045)
chr4 (20-61)||(49735470-49735511)
chr4 (20-61)||(49735693-49735734)
chr4 (20-61)||(54320635-54320676)
chr4 (20-61)||(56135751-56135792)
chr4 (17-61)||(1968557-1968601)
chr4 (17-61)||(26166939-26166983)
chr4 (20-60)||(46007902-46007942)
chr4 (17-60)||(5731029-5731072)
chr4 (26-61)||(54935069-54935104)
chr4 (20-67)||(54935270-54935317)
chr4 (20-70)||(44145766-44145816)
chr4 (20-61)||(17182686-17182727)
chr4 (20-61)||(31348522-31348563)
chr4 (20-61)||(37711324-37711365)
chr4 (21-61)||(41174547-41174587)
chr4 (29-65)||(55080577-55080613)
chr4 (24-59)||(27735749-27735784)
chr4 (26-61)||(27735952-27735987)
chr4 (30-61)||(45741892-45741923)
chr4 (26-61)||(53260720-53260755)
chr4 (26-61)||(54320437-54320472)
chr4 (31-61)||(41174358-41174388)
chr4 (20-61)||(7977698-7977739)
chr4 (29-66)||(27775580-27775617)
chr4 (29-58)||(34110803-34110832)
chr4 (20-61)||(47846257-47846298)
chr4 (20-61)||(54576329-54576370)
chr4 (20-60)||(16400803-16400843)
chr4 (17-61)||(22186721-22186765)
chr4 (29-61)||(29798290-29798322)
chr4 (20-56)||(35565565-35565601)
chr4 (26-66)||(47433916-47433956)
chr4 (25-61)||(47846469-47846505)
chr4 (29-61)||(51329798-51329830)
[»] chr1 (30 HSPs)
chr1 (20-66)||(30010329-30010375)
chr1 (20-65)||(12234211-12234256)
chr1 (20-61)||(26324016-26324057)
chr1 (17-61)||(525298-525342)
chr1 (26-61)||(12234012-12234047)
chr1 (17-60)||(20576136-20576179)
chr1 (28-66)||(26941042-26941080)
chr1 (21-67)||(33643264-33643310)
chr1 (20-61)||(20607418-20607459)
chr1 (28-69)||(40094927-40094968)
chr1 (20-61)||(41498406-41498447)
chr1 (20-61)||(51303386-51303427)
chr1 (26-66)||(20607220-20607260)
chr1 (17-61)||(32951516-32951560)
chr1 (20-60)||(38510095-38510135)
chr1 (26-61)||(1085697-1085732)
chr1 (20-59)||(35512998-35513037)
chr1 (26-61)||(38509896-38509931)
chr1 (20-61)||(2470732-2470773)
chr1 (20-61)||(2858934-2858975)
chr1 (20-65)||(23536778-23536823)
chr1 (20-61)||(30010533-30010574)
chr1 (20-61)||(35349663-35349704)
chr1 (20-61)||(35927816-35927857)
chr1 (28-60)||(2470934-2470966)
chr1 (20-56)||(2859133-2859169)
chr1 (20-60)||(7444481-7444521)
chr1 (29-65)||(8616673-8616709)
chr1 (21-61)||(35928014-35928054)
chr1 (20-60)||(40709492-40709532)
[»] chr7 (33 HSPs)
chr7 (20-61)||(36267754-36267795)
chr7 (17-66)||(37620771-37620820)
chr7 (20-61)||(37925843-37925884)
chr7 (20-61)||(39856066-39856107)
chr7 (17-61)||(31571668-31571712)
chr7 (26-61)||(1051705-1051740)
chr7 (20-67)||(36267549-36267596)
chr7 (19-61)||(28074105-28074147)
chr7 (26-60)||(31364251-31364285)
chr7 (20-66)||(33519249-33519295)
chr7 (26-68)||(40282192-40282234)
chr7 (20-61)||(13770950-13770991)
chr7 (20-61)||(25887194-25887235)
chr7 (21-66)||(41496954-41496999)
chr7 (28-61)||(48881758-48881791)
chr7 (17-61)||(13771144-13771188)
chr7 (17-61)||(47391054-47391098)
chr7 (21-61)||(48881560-48881600)
chr7 (29-60)||(33655318-33655349)
chr7 (26-61)||(47390857-47390892)
chr7 (20-70)||(34228520-34228570)
chr7 (31-61)||(37417835-37417865)
chr7 (30-60)||(42306541-42306571)
chr7 (20-57)||(4833537-4833574)
chr7 (28-61)||(13425122-13425155)
chr7 (20-61)||(18231787-18231828)
chr7 (28-61)||(28074317-28074350)
chr7 (20-61)||(39646471-39646512)
chr7 (30-63)||(40572444-40572477)
chr7 (26-62)||(16833683-16833719)
chr7 (33-61)||(24970379-24970407)
chr7 (32-60)||(26365770-26365798)
chr7 (31-59)||(39646671-39646699)
[»] chr6 (23 HSPs)
chr6 (20-61)||(14515475-14515516)
chr6 (20-60)||(9719034-9719074)
chr6 (21-61)||(10818231-10818271)
chr6 (17-65)||(30850110-30850158)
chr6 (20-67)||(14515672-14515719)
chr6 (26-61)||(15323227-15323262)
chr6 (26-61)||(15353366-15353401)
chr6 (31-69)||(1300623-1300661)
chr6 (28-61)||(4097237-4097270)
chr6 (20-61)||(9721140-9721181)
chr6 (20-61)||(23090997-23091038)
chr6 (20-61)||(30487308-30487349)
chr6 (21-61)||(9051734-9051774)
chr6 (20-60)||(19278238-19278278)
chr6 (29-60)||(21607054-21607085)
chr6 (26-60)||(4097720-4097754)
chr6 (20-66)||(12811181-12811227)
chr6 (26-60)||(30487512-30487546)
chr6 (20-61)||(10818417-10818458)
chr6 (34-67)||(31798914-31798947)
chr6 (28-60)||(5585304-5585336)
chr6 (29-61)||(9719240-9719272)
chr6 (20-60)||(31849113-31849153)
[»] scaffold0198 (1 HSPs)
scaffold0198 (17-60)||(3150-3193)
[»] scaffold0026 (1 HSPs)
scaffold0026 (17-60)||(1175-1218)
[»] chr3 (26 HSPs)
chr3 (17-60)||(18654799-18654842)
chr3 (17-68)||(24560415-24560466)
chr3 (17-59)||(17474404-17474446)
chr3 (21-59)||(55428581-55428619)
chr3 (20-61)||(24560219-24560260)
chr3 (20-61)||(34641191-34641232)
chr3 (28-61)||(37102348-37102381)
chr3 (26-67)||(54574563-54574604)
chr3 (26-61)||(24253723-24253758)
chr3 (26-57)||(27541937-27541968)
chr3 (26-65)||(41110319-41110358)
chr3 (27-61)||(651742-651776)
chr3 (23-57)||(21773788-21773822)
chr3 (31-61)||(34641004-34641034)
chr3 (26-59)||(10748299-10748332)
chr3 (20-61)||(28582710-28582751)
chr3 (26-59)||(31664391-31664424)
chr3 (26-59)||(31931972-31932005)
chr3 (17-66)||(36568901-36568950)
chr3 (20-61)||(42772046-42772087)
chr3 (20-61)||(44412363-44412404)
chr3 (33-65)||(5903607-5903639)
chr3 (26-58)||(9312676-9312708)
chr3 (26-58)||(14897981-14898013)
chr3 (31-67)||(30200094-30200130)
chr3 (31-59)||(46978441-46978469)
[»] scaffold0294 (1 HSPs)
scaffold0294 (25-64)||(15468-15507)
[»] scaffold0012 (2 HSPs)
scaffold0012 (31-66)||(184608-184643)
scaffold0012 (20-59)||(184808-184847)
[»] scaffold0067 (1 HSPs)
scaffold0067 (20-61)||(39391-39432)
[»] scaffold0071 (1 HSPs)
scaffold0071 (29-61)||(52898-52930)


Alignment Details
Target: chr8 (Bit Score: 393; Significance: 0; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 26 - 498
Target Start/End: Complemental strand, 33922562 - 33922104
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacaccataagagtagtcataaatagagtttagtcaatgattttgattttaagctctcaaagttcatata 125  Q
    ||||||||| |||||||||||||||||||||| ||| ||||| ||||||||    |||||||||||||||||||||||||| ||||||||||||||||||    
T  33922562 tcccttcccttcctaaaccctcaatccaaacataccctaagaatagtcata----gagtttagtcaatgattttgattttaggctctcaaagttcatata 33922467  T
Q  126 ttgttagttgttaatatcttttcccccattgaacgctaagatgctgaatcatgtgttgtcgaacactttgcatggaccaacctaacctgtttaattattt 225  Q
    ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33922466 ttgctagttgttaatatcttttcccgcattgaacgctaagatgctgaatcatgtgttgtcgaacactttgcatggaccaacctaacctgtttaattattt 33922367  T
Q  226 ttccttccttttttacattcaaatcgaacaaagaacaagttataaaatgaagaaaaaacaacgaggatttaaaagtgaaagtttagcatattataccttt 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33922366 ttccttccttttttacattcaaatcgaacaaagaacaagttataaaatgaagaaaaaacaacgaggatttaaaagtgaaagtttagcatattataccttt 33922267  T
Q  326 gaaacgacaaccaggtgttgtacttctgtcttgcctaatgcctatcattgcctatcattgttgttattgttgatgaaaatgaaattgaaattttttgttg 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  33922266 gaaacgacaaccaggtgttgtacttctgtcttgcctaatgcctatc----------attgttgttattgttgatgaaaatgaaattgaaattttttgttg 33922177  T
Q  426 aagaaagaggaaatcaatgaaggtttatatagatattttatcacgaagtttccttgtaatttcctctctatgt 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33922176 aagaaagaggaaatcaatgaaggtttatatagatattttatcacgaagtttccttgtaatttcctctctatgt 33922104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 16024198 - 16024150
Alignment:
Q  18 ctctcccttcccttcccctcctaaaccctcaatccaaacacaccataag 66  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  16024198 ctctcccctcccttcccttcctaaaccctcaatccaaacacaccataag 16024150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 2248498 - 2248454
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||| |||||||||||||||||| |||||||||||||||||    
T  2248498 actctcccctcccttcccctcctaaactctcaatccaaacacacc 2248454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 43732716 - 43732681
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||||||||||||||    
T  43732716 tcccttcccctcctaaaccctcaatccaaacacacc 43732681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 7394663 - 7394701
Alignment:
Q  21 tcccttcccttcccctcctaaaccctcaatccaaacaca 59  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  7394663 tcccctcccttcccctcctaaaccctcaatccaaacaca 7394701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 13405020 - 13404978
Alignment:
Q  19 tctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  13405020 tctcccatcccttcccctcctaaaccctcaatccaaccacacc 13404978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 8815342 - 8815383
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||| ||||||||||||||||||||||||||||||    
T  8815342 ctcccctccctccccctcctaaaccctcaatccaaacacacc 8815383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 12022344 - 12022385
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||| ||||||||||||||||||||||||||||||||    
T  12022344 ctcccctcctttcccctcctaaaccctcaatccaaacacacc 12022385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 31543273 - 31543314
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  31543273 ctcccctcccttcccctcctaaaccctcaatcgaaacacacc 31543314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 43732888 - 43732929
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  43732888 ctcccctcccttcccctcctaaaccctccatccaaacacacc 43732929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 3726901 - 3726865
Alignment:
Q  25 ttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||| |||||||||||||    
T  3726901 ttcccttcccctcctaaaccctccatccaaacacacc 3726865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 8815175 - 8815135
Alignment:
Q  29 cttcccctcctaaaccctcaatccaaacacaccataagagt 69  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  8815175 cttcccctcctaaaccctccatccaaacacaccctaagagt 8815135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 9718681 - 9718721
Alignment:
Q  21 tcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  9718681 tcccctcccttctcctcctaaaccctcaatccaaacacacc 9718721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 30365176 - 30365132
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||    
T  30365176 actctcccctcctttctcctcctaaaccctcaatccaaacacacc 30365132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 57
Target Start/End: Complemental strand, 1281180 - 1281149
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaaca 57  Q
    ||||||||||||||||||||||||||||||||    
T  1281180 tcccttcccctcctaaaccctcaatccaaaca 1281149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 4247727 - 4247762
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4247727 tcccttcccctcctaaaccttcaatccaaacacacc 4247762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 11785727 - 11785774
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataaga 67  Q
    |||||||| ||| ||||||||||||||| ||||||||||||| |||||    
T  11785727 ctcccttctcttaccctcctaaaccctccatccaaacacaccctaaga 11785774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 16024351 - 16024394
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacac 60  Q
    |||||||| ||||||||||||||||| |||| ||||||||||||    
T  16024351 actctcccctcccttcccctcctaaatcctccatccaaacacac 16024394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 28083779 - 28083744
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||||| ||||||||    
T  28083779 tcccttcccctcctaaaccctcaatccgaacacacc 28083744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 2481980 - 2482022
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacaccataagag 68  Q
    |||||||||||||||||||||| ||||||||| ||| ||||||    
T  2481980 tcccttcccctcctaaaccctccatccaaacataccctaagag 2482022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 6315101 - 6315068
Alignment:
Q  28 ccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||||||||||    
T  6315101 ccttcgcctcctaaaccctcaatccaaacacacc 6315068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 34196515 - 34196556
Alignment:
Q  27 cccttcccctcctaaaccctcaatccaaacacaccataagag 68  Q
    ||||||||||||||||||||| |||||||| |||| ||||||    
T  34196515 cccttcccctcctaaaccctccatccaaacgcaccctaagag 34196556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 36309044 - 36309081
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaaca 57  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  36309044 ctcccctcccttcccctcctaaaccctccatccaaaca 36309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 41103547 - 41103506
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| || ||||||||||||||||||| |||||||||||||    
T  41103547 ctcccctctcttcccctcctaaaccctccatccaaacacacc 41103506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 31738633 - 31738665
Alignment:
Q  29 cttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||| |||||||||||||    
T  31738633 cttcccctcctaaaccctccatccaaacacacc 31738665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 43826378 - 43826334
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||| ||| ||||||||||||| |||||||| |||||||||    
T  43826378 actctcccctccattcccctcctaaatcctcaatctaaacacacc 43826334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 5688591 - 5688639
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataagag 68  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5688591 ctcccttcccttcccctcctaaaccctcaatccaaacacaccctaagag 5688639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 14245247 - 14245295
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataagag 68  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  14245247 ctcccctcccttcccctcctaaaccctcaatccaaacacaccctaagag 14245295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 13634754 - 13634713
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  13634754 ctcccctcccttcccctcctaaaccctcaatccaaacacacc 13634713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 13634912 - 13634953
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  13634912 ctcccctcccttcccctcctaaaccctcaatccaaacacacc 13634953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 14245131 - 14245090
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  14245131 ctcccctcccttcccctcctaaaccctcaatccaaacacacc 14245090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 16938522 - 16938481
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  16938522 ctcccctcccttcccctcctaaaccctcaatccaaacacacc 16938481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 2550553 - 2550592
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacaca 59  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  2550553 ctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 20147077 - 20147112
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||||||||||||||    
T  20147077 tcccttcccctcctaaaccctcaatccaaacacacc 20147112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 40305865 - 40305907
Alignment:
Q  19 tctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||| ||||||| ||||||||||||||||||||||||||||    
T  40305865 tctcccctcccttctcctcctaaaccctcaatccaaacacacc 40305907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 1658014 - 1658055
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  1658014 ctcccctcccttcccctcctaaaccctccatccaaacacacc 1658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 7544179 - 7544138
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||| ||||||||||||||||||||||||||    
T  7544179 ctcccctcccttcccttcctaaaccctcaatccaaacacacc 7544138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 10476229 - 10476270
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  10476229 ctcccctcccttcccctcctaaaccctccatccaaacacacc 10476270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 11437143 - 11437184
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  11437143 ctcccttcccttccccttctaaaccctcaatccaaaaacacc 11437184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 15986833 - 15986866
Alignment:
Q  28 ccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||||||||||||    
T  15986833 ccttcccctcctaaaccctcaatccaaacacacc 15986866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 26414936 - 26414895
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  26414936 ctcccctcccttctcctcctaaaccctcaatccaaacacacc 26414895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 11436976 - 11436944
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacac 58  Q
    |||||||||||||||||||||||||||||||||    
T  11436976 tcccttcccctcctaaaccctcaatccaaacac 11436944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 14681505 - 14681473
Alignment:
Q  28 ccttcccctcctaaaccctcaatccaaacacac 60  Q
    |||||||||||||||||||||||||||||||||    
T  14681505 ccttcccctcctaaaccctcaatccaaacacac 14681473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 15986667 - 15986619
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataagag 68  Q
    ||||| ||||||||||||||||||||||  |||||||||||| ||||||    
T  15986667 ctcccctcccttcccctcctaaaccctctttccaaacacaccctaagag 15986619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 40305707 - 40305667
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacaccataag 66  Q
    |||||||||||||||||||||| ||||||||||||| ||||    
T  40305707 tcccttcccctcctaaaccctccatccaaacacaccctaag 40305667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 10204613 - 10204578
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||||||||| |||||||||||||    
T  10204613 tcccttcccctcctaaaccctcgatccaaacacacc 10204578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 10476063 - 10476028
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||| ||||||||||    
T  10476063 tcccttcccctcctaaaccctcaattcaaacacacc 10476028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 22022880 - 22022849
Alignment:
Q  30 ttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||||||||||    
T  22022880 ttcccctcctaaaccctcaatccaaacacacc 22022849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 34980847 - 34980812
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||| ||||||||||||||||    
T  34980847 tcccttcccctcctaaaccttcaatccaaacacacc 34980812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 61
Target Start/End: Complemental strand, 9856922 - 9856892
Alignment:
Q  31 tcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||||||||||||||||||    
T  9856922 tcccctcctaaaccctcaatccaaacacacc 9856892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 11756923 - 11756882
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacaca 59  Q
    |||||||| ||||| ||||||||||||||||||||||||||||    
T  11756923 actctcccatccct-cccctcctaaaccctcaatccaaacaca 11756882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 21581154 - 21581188
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacac 60  Q
    |||||||||||||||||||||| ||||||||||||    
T  21581154 tcccttcccctcctaaaccctccatccaaacacac 21581188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 42681491 - 42681445
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataag 66  Q
    ||||| ||| |||||||| ||||||||||||||||||||||| ||||    
T  42681491 ctcccctcctttcccctcttaaaccctcaatccaaacacaccttaag 42681445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 7544345 - 7544378
Alignment:
Q  28 ccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||||||| |||||||||||||    
T  7544345 ccttcccctcctaaaccctccatccaaacacacc 7544378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 8503038 - 8503079
Alignment:
Q  28 ccttcccctcctaaaccctcaatccaaacacaccataagagt 69  Q
    |||||| ||| ||||||||||||||||||||||| |||||||    
T  8503038 ccttcctctcataaaccctcaatccaaacacaccctaagagt 8503079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 36363078 - 36363037
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacac 58  Q
    |||||||| ||| ||||||| |||||||||||||||||||||    
T  36363078 actctcccctccattccccttctaaaccctcaatccaaacac 36363037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 36363230 - 36363271
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacac 58  Q
    |||||| | |||||||||||||||||||||| ||||||||||    
T  36363230 actctctcctcccttcccctcctaaaccctccatccaaacac 36363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 58
Target Start/End: Original strand, 36392359 - 36392388
Alignment:
Q  29 cttcccctcctaaaccctcaatccaaacac 58  Q
    ||||||||||||||||||||||||||||||    
T  36392359 cttcccctcctaaaccctcaatccaaacac 36392388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 40815336 - 40815299
Alignment:
Q  24 cttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  40815336 cttcccttcccctcctaaatcttcaatccaaacacacc 40815299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 8551628 - 8551660
Alignment:
Q  29 cttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||| ||||||||||||||||    
T  8551628 cttcccctcctaaaccttcaatccaaacacacc 8551660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 11757104 - 11757144
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacac 60  Q
    ||||| |||||||||||| ||||||||| ||||||||||||    
T  11757104 ctcccctcccttcccctcttaaaccctccatccaaacacac 11757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 16502006 - 16502034
Alignment:
Q  33 ccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||||||||||||||||    
T  16502006 ccctcctaaaccctcaatccaaacacacc 16502034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 22023571 - 22023607
Alignment:
Q  31 tcccctcctaaaccctcaatccaaacacaccataaga 67  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  22023571 tcccctcctaaaccctccatccaaacacaccctaaga 22023607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 36347739 - 36347783
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  36347739 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 36347783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 17379889 - 17379842
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataaga 67  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  17379889 ctcccctcccttcccctcctaaaccctcaatccaaacacaccctaaga 17379842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 35736218 - 35736177
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  35736218 ctcccctcccttcccctcctaaaccctcaatccaaacacacc 35736177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 8427069 - 8427110
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacac 58  Q
    |||||||| |||||| ||||||||||||||||||||||||||    
T  8427069 actctcccctccctttccctcctaaaccctcaatccaaacac 8427110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 22356205 - 22356246
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  22356205 ctcccctcccttcccctcctaaatcctcaatccaaacacacc 22356246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 23748296 - 23748337
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  23748296 ctcccctcccttcccctcctaaaccctccatccaaacacacc 23748337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 36046402 - 36046443
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  36046402 ctcccctcccttcccctcataaaccctcaatccaaacacacc 36046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 45257350 - 45257309
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  45257350 ctcccttcctttcccctcctaaactctcaatccaaacacacc 45257309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 16713534 - 16713494
Alignment:
Q  21 tcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  16713534 tcccttcccttcccctcttaaaccctcaatcaaaacacacc 16713494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 17380051 - 17380083
Alignment:
Q  29 cttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||||||||||||||||||||    
T  17380051 cttcccctcctaaaccctcaatccaaacacacc 17380083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 31928250 - 31928286
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaac 56  Q
    |||||||||||||||||||||||||||| ||||||||    
T  31928250 ctcccttcccttcccctcctaaaccctcgatccaaac 31928286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 36347587 - 36347543
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||| |||||||||||||||||||||||  |||||||||||||    
T  36347587 actctctcttcccttcccctcctaaacccttcatccaaacacacc 36347543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 40022399 - 40022359
Alignment:
Q  27 cccttcccctcctaaaccctcaatccaaacacaccataaga 67  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  40022399 cccttaccctcctaaaccctcaatccaaacacaccctaaga 40022359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 9427022 - 9426979
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacaccataagagt 69  Q
    ||||||||||||||||||  |||||||||||||||||| |||||    
T  9427022 tcccttcccctcctaaactttcaatccaaacacaccattagagt 9426979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 42296510 - 42296545
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||| |||||||||||||||||||    
T  42296510 tcccttcccctcctaatccctcaatccaaacacacc 42296545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 2381033 - 2380987
Alignment:
Q  22 cccttcccttcccctcctaaaccctcaatccaaacacaccataagag 68  Q
    |||| ||||||||||||||||||||| ||||||||||| | ||||||    
T  2381033 ccctccccttcccctcctaaaccctctatccaaacacatcctaagag 2380987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 12541807 - 12541773
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacac 60  Q
    |||| ||||||||||||||||||||||||||||||    
T  12541807 tcccctcccctcctaaaccctcaatccaaacacac 12541773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 60
Target Start/End: Original strand, 36567063 - 36567093
Alignment:
Q  30 ttcccctcctaaaccctcaatccaaacacac 60  Q
    |||||||||||||||||||||||||||||||    
T  36567063 ttcccctcctaaaccctcaatccaaacacac 36567093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 63
Target Start/End: Original strand, 16565985 - 16566014
Alignment:
Q  34 cctcctaaaccctcaatccaaacacaccat 63  Q
    ||||||||||||||||||||||||||||||    
T  16565985 cctcctaaaccctcaatccaaacacaccat 16566014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 31061402 - 31061361
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||    
T  31061402 ctcccatcctttcccctcctaaaccttcaatccaaacacacc 31061361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 31061561 - 31061598
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaaca 57  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  31061561 ctcccctccattcccctcctaaaccctcaatccaaaca 31061598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 55
Target Start/End: Complemental strand, 33265644 - 33265615
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaa 55  Q
    ||||||||||||||||||||||||||||||    
T  33265644 tcccttcccctcctaaaccctcaatccaaa 33265615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 35736388 - 35736429
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||| |||||||||||||| |||||||||||||    
T  35736388 ctcccctcccttcacctcctaaaccctccatccaaacacacc 35736429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 41778816 - 41778775
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||| |||| ||||||||||||||||||||||||    
T  41778816 ctcccctccctttcccttctaaaccctcaatccaaacacacc 41778775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 41841725 - 41841684
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||| |||||||||| ||||||||||||||||||    
T  41841725 ctcccatccctttccctcctaaatcctcaatccaaacacacc 41841684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 2241456 - 2241413
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||| |||||||||||||| ||||||||||| |||||||||    
T  2241456 actctcccctcccttcccctcct-aaccctcaatctaaacacacc 2241413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 3094555 - 3094595
Alignment:
Q  21 tcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||| |||||| || ||||||||||||||||||||||||||    
T  3094555 tcccctccctttccttcctaaaccctcaatccaaacacacc 3094595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 15224896 - 15224936
Alignment:
Q  21 tcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||| |||||||||||||||||||||  |||||||||||||    
T  15224896 tcccctcccttcccctcctaaacccttgatccaaacacacc 15224936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 36046250 - 36046206
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||| ||  |||||||||||||||||| |||||||||||||    
T  36046250 actctcccctcatttcccctcctaaaccctccatccaaacacacc 36046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 37711181 - 37711140
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37711181 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 37711140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 2247999 - 2248045
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacaccat 63  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  2247999 actctcccttcacttctcctcctaaaccctcaatccaaacacaccat 2248045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 49735511 - 49735470
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  49735511 ctcccctcccttcccctcctaaaccctcaatccaaacacacc 49735470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 49735693 - 49735734
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  49735693 ctcccctcccttcccctcctaaaccctcaatccaaacacacc 49735734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 54320635 - 54320676
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  54320635 ctcccctcccttcccctcctaaaccctcaatccaaacacacc 54320676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 56135792 - 56135751
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  56135792 ctcccctcccttcccctcctaaaccctcaatccaaacacacc 56135751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 1968557 - 1968601
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| || ||||||||||||||||||||||||||||||||||||    
T  1968557 actcttccctcccttcccctcctaaaccctcaatccaaacacacc 1968601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 26166983 - 26166939
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||    
T  26166983 actctcccctccattcccctcctaaaccctcaatccaaacacacc 26166939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 46007902 - 46007942
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacac 60  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  46007902 ctcccctcccttcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 5731029 - 5731072
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacac 60  Q
    |||||||| ||||||||||||||||||||||||| |||||||||    
T  5731029 actctcccctcccttcccctcctaaaccctcaattcaaacacac 5731072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 54935104 - 54935069
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||||||||||||||    
T  54935104 tcccttcccctcctaaaccctcaatccaaacacacc 54935069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 54935270 - 54935317
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataaga 67  Q
    ||||| |||||||||||||||||||||| ||||||||||||| |||||    
T  54935270 ctcccctcccttcccctcctaaaccctccatccaaacacaccctaaga 54935317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 44145816 - 44145766
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataagagta 70  Q
    ||||| ||||||||||||||||||| | |||||||||||||| ||||||||    
T  44145816 ctcccctcccttcccctcctaaaccttgaatccaaacacaccctaagagta 44145766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 17182686 - 17182727
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  17182686 ctcccttcctttcccctcataaaccctcaatccaaacacacc 17182727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 31348522 - 31348563
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  31348522 ctcccctcccttcccctcctaaactctcaatccaaacacacc 31348563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 37711324 - 37711365
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  37711324 ctcccctcccttcccctcctaaaccctccatccaaacacacc 37711365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 41174547 - 41174587
Alignment:
Q  21 tcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  41174547 tcccctcccttcccctcctaaaccctccatccaaacacacc 41174587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 55080613 - 55080577
Alignment:
Q  29 cttcccctcctaaaccctcaatccaaacacaccataa 65  Q
    ||||| |||||||||||||||||||||||||||||||    
T  55080613 cttcctctcctaaaccctcaatccaaacacaccataa 55080577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 27735784 - 27735749
Alignment:
Q  24 cttcccttcccctcctaaaccctcaatccaaacaca 59  Q
    |||||||||||||||||||||||| |||||||||||    
T  27735784 cttcccttcccctcctaaaccctcgatccaaacaca 27735749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 27735952 - 27735987
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||||||||| |||||||||||||    
T  27735952 tcccttcccctcctaaaccctccatccaaacacacc 27735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 45741923 - 45741892
Alignment:
Q  30 ttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||||||||||    
T  45741923 ttcccctcctaaaccctcaatccaaacacacc 45741892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 53260755 - 53260720
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||||||||| |||||||||||||    
T  53260755 tcccttcccctcctaaaccctccatccaaacacacc 53260720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 54320472 - 54320437
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||| |||||||||||||||||||||||||||||    
T  54320472 tccctttccctcctaaaccctcaatccaaacacacc 54320437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 61
Target Start/End: Complemental strand, 41174388 - 41174358
Alignment:
Q  31 tcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||||||||||||||||||    
T  41174388 tcccctcctaaaccctcaatccaaacacacc 41174358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 7977698 - 7977739
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||| |||||||| |||||||||||||||||||||||    
T  7977698 ctcccctcctttcccctcataaaccctcaatccaaacacacc 7977739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 27775617 - 27775580
Alignment:
Q  29 cttcccctcctaaaccctcaatccaaacacaccataag 66  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  27775617 cttcccctcctaaaccctcaatccaaacaaaccctaag 27775580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 58
Target Start/End: Complemental strand, 34110832 - 34110803
Alignment:
Q  29 cttcccctcctaaaccctcaatccaaacac 58  Q
    ||||||||||||||||||||||||||||||    
T  34110832 cttcccctcctaaaccctcaatccaaacac 34110803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 47846257 - 47846298
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||| |||| |||||||||||||||||||||||    
T  47846257 ctcccatcccttctcctcttaaaccctcaatccaaacacacc 47846298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 54576370 - 54576329
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||| |||||||||| |||||||||||||    
T  54576370 ctcccctcccttccccttctaaaccctccatccaaacacacc 54576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 16400843 - 16400803
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacac 60  Q
    ||||| ||||||| ||||||||||||||||||||| |||||    
T  16400843 ctcccctcccttctcctcctaaaccctcaatccaatcacac 16400803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 22186765 - 22186721
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| || ||||||||| |||||||||||||||||||| |||||    
T  22186765 actctgccctcccttcccttcctaaaccctcaatccaaatacacc 22186721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 29798322 - 29798290
Alignment:
Q  29 cttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||| ||||||||||||||||    
T  29798322 cttcccctcctaaaccatcaatccaaacacacc 29798290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 35565601 - 35565565
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaac 56  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  35565601 ctcccctcccttcccctgctaaaccctcaatccaaac 35565565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 47433916 - 47433956
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacaccataag 66  Q
    ||||||||||||||||||| |||| ||||||||||| ||||    
T  47433916 tcccttcccctcctaaaccgtcaacccaaacacaccctaag 47433956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 47846469 - 47846505
Alignment:
Q  25 ttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||| |||| |||||||||||||||||||||||    
T  47846469 ttcccttctcctcttaaaccctcaatccaaacacacc 47846505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 51329830 - 51329798
Alignment:
Q  29 cttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||| |||||||||||||||||    
T  51329830 cttcccctcctaaactctcaatccaaacacacc 51329798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 30010375 - 30010329
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataag 66  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  30010375 ctcccctcccttcccctcctaaaccctcaatccaaacacaccctaag 30010329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 12234211 - 12234256
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataa 65  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||    
T  12234211 ctcccctcccttcccctcctaaaccctccatccaaacacaccataa 12234256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 26324057 - 26324016
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  26324057 ctcccctcccttcccctcctaaaccctcaatccaaacacacc 26324016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 525298 - 525342
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||    
T  525298 actcttccttcccttcccgtcctaaaccctcaatccaaacacacc 525342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 12234047 - 12234012
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||||||||||||||    
T  12234047 tcccttcccctcctaaaccctcaatccaaacacacc 12234012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 20576179 - 20576136
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacac 60  Q
    |||||||| |||||||||||||||||||||| ||||||||||||    
T  20576179 actctcccctcccttcccctcctaaaccctctatccaaacacac 20576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 26941042 - 26941080
Alignment:
Q  28 ccttcccctcctaaaccctcaatccaaacacaccataag 66  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  26941042 ccttcccctcctaaaccctcaatccaaacacaccctaag 26941080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 33643310 - 33643264
Alignment:
Q  21 tcccttcccttcccctcctaaaccctcaatccaaacacaccataaga 67  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||||    
T  33643310 tcccttcccttcccctcctaaaccttcaatctaaacacaccctaaga 33643264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 20607418 - 20607459
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  20607418 ctcccctcccttcccctcctaaaccctccatccaaacacacc 20607459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 40094968 - 40094927
Alignment:
Q  28 ccttcccctcctaaaccctcaatccaaacacaccataagagt 69  Q
    |||||||||||||||||||| ||||||||||||| |||||||    
T  40094968 ccttcccctcctaaaccctccatccaaacacaccctaagagt 40094927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 41498447 - 41498406
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  41498447 ctcccctcacttcccctcctaaaccctcaatccaaacacacc 41498406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 51303427 - 51303386
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||| |||||||||||||||||||||||||||||||    
T  51303427 ctcccctcccctcccctcctaaaccctcaatccaaacacacc 51303386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 20607260 - 20607220
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacaccataag 66  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  20607260 tcccttcccctcctaaaccctcaattcaaacacaccctaag 20607220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 32951516 - 32951560
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||    
T  32951516 actctcccctcccttcctctcctaaactctcaatccaaacacacc 32951560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 38510095 - 38510135
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacac 60  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  38510095 ctcccctcccttcccctcctaaacccttaatccaaacacac 38510135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 1085697 - 1085732
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||||||||| |||||||||||||    
T  1085697 tcccttcccctcctaaaccctctatccaaacacacc 1085732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 35512998 - 35513037
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacaca 59  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  35512998 ctcccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 38509931 - 38509896
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||||||||| |||||||||||||    
T  38509931 tcccttcccctcctaaaccctctatccaaacacacc 38509896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 2470773 - 2470732
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||| ||| ||||||||||||||||||| |||||||||||||    
T  2470773 ctccattctcttcccctcctaaaccctccatccaaacacacc 2470732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 2858975 - 2858934
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||| ||||||||||||||| |||||||||||||    
T  2858975 ctcccctccctttccctcctaaaccctccatccaaacacacc 2858934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 23536823 - 23536778
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataa 65  Q
    ||||| ||||||| ||||||||| |||| |||||||||||||||||    
T  23536823 ctcccatcccttctcctcctaaatcctccatccaaacacaccataa 23536778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 30010533 - 30010574
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||| |||||||||| |||||||||||||    
T  30010533 ctcccctcccttccccttctaaaccctccatccaaacacacc 30010574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 35349663 - 35349704
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||| |||||||| ||||||||||||||    
T  35349663 ctcccctcccttcccctcataaacccttaatccaaacacacc 35349704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 35927857 - 35927816
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||    
T  35927857 ctcccctccattcccctcctaaaacctcaatccaaacacacc 35927816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 2470934 - 2470966
Alignment:
Q  28 ccttcccctcctaaaccctcaatccaaacacac 60  Q
    ||||||||||||||||| |||||||||||||||    
T  2470934 ccttcccctcctaaaccatcaatccaaacacac 2470966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 2859133 - 2859169
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaac 56  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  2859133 ctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 7444521 - 7444481
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacac 60  Q
    ||||||||||||| ||||| ||||||||||||| |||||||    
T  7444521 ctcccttcccttctcctcccaaaccctcaatcctaacacac 7444481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 8616709 - 8616673
Alignment:
Q  29 cttcccctcctaaaccctcaatccaaacacaccataa 65  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  8616709 cttcccctcctaaactctcaattcaaacacaccataa 8616673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 35928014 - 35928054
Alignment:
Q  21 tcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||| |||| |||||||||||||||||||    
T  35928014 tccctccccttccccttctaagccctcaatccaaacacacc 35928054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 40709492 - 40709532
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacac 60  Q
    ||||| ||| ||||||||||||| |||||||||||||||||    
T  40709492 ctcccctccgttcccctcctaaatcctcaatccaaacacac 40709532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 36267754 - 36267795
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  36267754 ctcccctcccttcccctcctaaaccctcaatccaaacacacc 36267795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 37620820 - 37620771
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacaccataag 66  Q
    |||||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  37620820 actctcccctcccttcccctcccaaaccctcaatccaaacacaccttaag 37620771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 37925884 - 37925843
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  37925884 ctcccctcccttcccctcctaaaccctcaatccaaacacacc 37925843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 39856066 - 39856107
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  39856066 ctcccctcccttcccctcctaaaccctcaatccaaacacacc 39856107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 31571668 - 31571712
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||| || |||||||||||||||||||||||||||||||||    
T  31571668 actctcccctcgcttcccctcctaaaccctcaatccaaacacacc 31571712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 1051705 - 1051740
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||||||||||||||    
T  1051705 tcccttcccctcctaaaccctcaatccaaacacacc 1051740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 36267596 - 36267549
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataaga 67  Q
    ||||| |||||||||||||||||||||| ||||||||||||| |||||    
T  36267596 ctcccctcccttcccctcctaaaccctccatccaaacacaccctaaga 36267549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 28074147 - 28074105
Alignment:
Q  19 tctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||| ||||||||||||||||||| ||||||||||||||||    
T  28074147 tctcccctcccttcccctcctaaaccttcaatccaaacacacc 28074105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 31364251 - 31364285
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacac 60  Q
    |||||||||||||||||||||||||||||||||||    
T  31364251 tcccttcccctcctaaaccctcaatccaaacacac 31364285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 33519249 - 33519295
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataag 66  Q
    ||||| |||||||||||||||||||||| ||||||||||||| ||||    
T  33519249 ctcccctcccttcccctcctaaaccctccatccaaacacaccctaag 33519295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 40282234 - 40282192
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacaccataagag 68  Q
    |||||||||||||||||||||||||||||||| ||| ||||||    
T  40282234 tcccttcccctcctaaaccctcaatccaaacataccctaagag 40282192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 13770991 - 13770950
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  13770991 ctcccctcccttcccctcctaaatcctcaatccaaacacacc 13770950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 25887235 - 25887194
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  25887235 ctcccctcccttcccctcataaaccctcaatccaaacacacc 25887194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 41496999 - 41496954
Alignment:
Q  21 tcccttcccttcccctcctaaaccctcaatccaaacacaccataag 66  Q
    |||| |||||||||||||||||||||| ||||||||||||| ||||    
T  41496999 tcccctcccttcccctcctaaaccctccatccaaacacaccctaag 41496954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 48881758 - 48881791
Alignment:
Q  28 ccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||||||||||||    
T  48881758 ccttcccctcctaaaccctcaatccaaacacacc 48881791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 13771144 - 13771188
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||| | |||||||||||||||||||||||||| |||||||||    
T  13771144 actctcacctcccttcccctcctaaaccctcaatctaaacacacc 13771188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 47391054 - 47391098
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||| |||||||||||| ||||||||| |||||||||||||    
T  47391054 actctcccctcccttcccctcttaaaccctccatccaaacacacc 47391098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 48881600 - 48881560
Alignment:
Q  21 tcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  48881600 tcccctcccttcccctcctaaaccctccatccaaacacacc 48881560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 60
Target Start/End: Original strand, 33655318 - 33655349
Alignment:
Q  29 cttcccctcctaaaccctcaatccaaacacac 60  Q
    ||||||||||||||||||||||||||||||||    
T  33655318 cttcccctcctaaaccctcaatccaaacacac 33655349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 47390892 - 47390857
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||| |||||||||||||||||||    
T  47390892 tcccttcccctcctaacccctcaatccaaacacacc 47390857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 34228520 - 34228570
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataagagta 70  Q
    ||||| ||||||| ||||||||||| ||||| |||||||||| ||||||||    
T  34228520 ctcccctcccttctcctcctaaaccttcaattcaaacacaccctaagagta 34228570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 61
Target Start/End: Original strand, 37417835 - 37417865
Alignment:
Q  31 tcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||||||||||||||||||    
T  37417835 tcccctcctaaaccctcaatccaaacacacc 37417865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 60
Target Start/End: Original strand, 42306541 - 42306571
Alignment:
Q  30 ttcccctcctaaaccctcaatccaaacacac 60  Q
    |||||||||||||||||||||||||||||||    
T  42306541 ttcccctcctaaaccctcaatccaaacacac 42306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 4833574 - 4833537
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaaca 57  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  4833574 ctcccctcccttcccctcctaaaccctccatccaaaca 4833537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 13425155 - 13425122
Alignment:
Q  28 ccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||||||| |||||||||||||    
T  13425155 ccttcccctcctaaaccctctatccaaacacacc 13425122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 18231787 - 18231828
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||||||||| ||| |||||||||||||    
T  18231787 ctcccctcccttcccctcctaaacgctccatccaaacacacc 18231828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 28074317 - 28074350
Alignment:
Q  28 ccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||| |||||||||||||||||||||||||||    
T  28074317 ccttcctctcctaaaccctcaatccaaacacacc 28074350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 39646512 - 39646471
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||| |||||||||| ||||||||||||||||    
T  39646512 ctcccctcccttcctctcctaaaccgtcaatccaaacacacc 39646471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 40572444 - 40572477
Alignment:
Q  30 ttcccctcctaaaccctcaatccaaacacaccat 63  Q
    |||||||| |||||||||||||||||||||||||    
T  40572444 ttcccctcttaaaccctcaatccaaacacaccat 40572477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 16833719 - 16833683
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacca 62  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  16833719 tccctttccctcttaaaccctcaatccaaacacacca 16833683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 24970379 - 24970407
Alignment:
Q  33 ccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||||||||||||||||    
T  24970379 ccctcctaaaccctcaatccaaacacacc 24970407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 60
Target Start/End: Complemental strand, 26365798 - 26365770
Alignment:
Q  32 cccctcctaaaccctcaatccaaacacac 60  Q
    |||||||||||||||||||||||||||||    
T  26365798 cccctcctaaaccctcaatccaaacacac 26365770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 59
Target Start/End: Original strand, 39646671 - 39646699
Alignment:
Q  31 tcccctcctaaaccctcaatccaaacaca 59  Q
    |||||||||||||||||||||||||||||    
T  39646671 tcccctcctaaaccctcaatccaaacaca 39646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 14515516 - 14515475
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  14515516 ctcccctcccttcccctcctaaaccctcaatccaaacacacc 14515475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 9719074 - 9719034
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacac 60  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  9719074 ctcccctcccttcccctcctaaaccctcaatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 10818271 - 10818231
Alignment:
Q  21 tcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  10818271 tcccctcccttcccctcctaaaccctcaatccaaacacacc 10818231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 30850110 - 30850158
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacaccataa 65  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  30850110 actctcccttctctttccctcctaaaccctcaatccaaacacacaataa 30850158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 14515672 - 14515719
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataaga 67  Q
    ||||||| |||||||||||||||||||| ||||||||||||| |||||    
T  14515672 ctccctttccttcccctcctaaaccctccatccaaacacaccctaaga 14515719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 15323262 - 15323227
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||||||||||||||    
T  15323262 tcccttcccctcctaaaccctcaatccaaacacacc 15323227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 15353401 - 15353366
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||||||||||||||    
T  15353401 tcccttcccctcctaaaccctcaatccaaacacacc 15353366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 1300661 - 1300623
Alignment:
Q  31 tcccctcctaaaccctcaatccaaacacaccataagagt 69  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  1300661 tcccctcctaaaccctcaatccaaacacaccctaagagt 1300623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 4097270 - 4097237
Alignment:
Q  28 ccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||||||||||||    
T  4097270 ccttcccctcctaaaccctcaatccaaacacacc 4097237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 9721181 - 9721140
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||| ||||||||||||||||    
T  9721181 ctcccctcccttcccctcctaaaccttcaatccaaacacacc 9721140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 23091038 - 23090997
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||| ||||||||||||||||    
T  23091038 ctcccctcccttcccctcctaaaccttcaatccaaacacacc 23090997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 30487349 - 30487308
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  30487349 ctcccctcccttcccctcctaaaccctccatccaaacacacc 30487308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 9051734 - 9051774
Alignment:
Q  21 tcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  9051734 tcccctcccttcccctcttaaaccctcaatccaaacacacc 9051774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 19278238 - 19278278
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacac 60  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  19278238 ctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 60
Target Start/End: Original strand, 21607054 - 21607085
Alignment:
Q  29 cttcccctcctaaaccctcaatccaaacacac 60  Q
    ||||||||||||||||||||||||||||||||    
T  21607054 cttcccctcctaaaccctcaatccaaacacac 21607085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 4097720 - 4097754
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacac 60  Q
    |||||||||||| ||||||||||||||||||||||    
T  4097720 tcccttcccctcttaaaccctcaatccaaacacac 4097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 12811181 - 12811227
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacaccataag 66  Q
    ||||| || |||||| |||||||||||||||||||||||||| ||||    
T  12811181 ctcccctctcttcccatcctaaaccctcaatccaaacacaccctaag 12811227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 30487512 - 30487546
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacac 60  Q
    |||||||||||||||||||||||||| ||||||||    
T  30487512 tcccttcccctcctaaaccctcaatcgaaacacac 30487546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 10818417 - 10818458
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||| |||||||||||| |||||||||||||||||    
T  10818417 ctcccctccctacccctcctaaactctcaatccaaacacacc 10818458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 31798947 - 31798914
Alignment:
Q  34 cctcctaaaccctcaatccaaacacaccataaga 67  Q
    |||||||||||||||||||||||||||| |||||    
T  31798947 cctcctaaaccctcaatccaaacacaccctaaga 31798914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 5585336 - 5585304
Alignment:
Q  28 ccttcccctcctaaaccctcaatccaaacacac 60  Q
    |||||||||||||||||||| ||||||||||||    
T  5585336 ccttcccctcctaaaccctccatccaaacacac 5585304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 9719240 - 9719272
Alignment:
Q  29 cttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||| |||||||||||||||||||||||    
T  9719240 cttcccctcataaaccctcaatccaaacacacc 9719272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 31849153 - 31849113
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacac 60  Q
    ||||| |||||||||||| |||||||||||||| |||||||    
T  31849153 ctcccctcccttcccctcttaaaccctcaatcctaacacac 31849113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 3193 - 3150
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacac 60  Q
    |||||||| |||||||||||||||||| ||||||||||||||||    
T  3193 actctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 1218 - 1175
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacac 60  Q
    |||||||| || ||||||||||||||||||||||||||||||||    
T  1218 actctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000005; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 18654799 - 18654842
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacac 60  Q
    |||||||| ||||||||||||||||||||||||| |||||||||    
T  18654799 actctcccctcccttcccctcctaaaccctcaattcaaacacac 18654842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 24560415 - 24560466
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacaccataagag 68  Q
    |||||||| ||| |||||||||||||||||| ||||||||||||| ||||||    
T  24560415 actctcccatccgttcccctcctaaaccctccatccaaacacaccctaagag 24560466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 17474404 - 17474446
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacaca 59  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  17474404 actctcccctcccttcccctcctcaaccctcaatccaaacaca 17474446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 55428581 - 55428619
Alignment:
Q  21 tcccttcccttcccctcctaaaccctcaatccaaacaca 59  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  55428581 tcccctcccttcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 24560260 - 24560219
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||||||| ||||||||||||||    
T  24560260 ctcccctcccttcccctcctaaacccttaatccaaacacacc 24560219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 34641191 - 34641232
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  34641191 ctcccctcccttcccctcctaaaccctccatccaaacacacc 34641232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 37102348 - 37102381
Alignment:
Q  28 ccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||||||||||||||||||||||||||||||||    
T  37102348 ccttcccctcctaaaccctcaatccaaacacacc 37102381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 54574563 - 54574604
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacaccataaga 67  Q
    ||||||||| |||||||||||||||||||||||||| |||||    
T  54574563 tcccttcccttcctaaaccctcaatccaaacacaccctaaga 54574604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 24253758 - 24253723
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||| |||||||||||||||||||||||||||||    
T  24253758 tccctttccctcctaaaccctcaatccaaacacacc 24253723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 57
Target Start/End: Complemental strand, 27541968 - 27541937
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaaca 57  Q
    ||||||||||||||||||||||||||||||||    
T  27541968 tcccttcccctcctaaaccctcaatccaaaca 27541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 41110358 - 41110319
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacacaccataa 65  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  41110358 tcccttcccctcctaaatcctccatccaaacacaccataa 41110319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 651776 - 651742
Alignment:
Q  27 cccttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||| ||||||||||||||||||||||||||||||    
T  651776 ccctccccctcctaaaccctcaatccaaacacacc 651742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 21773822 - 21773788
Alignment:
Q  23 ccttcccttcccctcctaaaccctcaatccaaaca 57  Q
    |||||||||||||||||||||| ||||||||||||    
T  21773822 ccttcccttcccctcctaaaccttcaatccaaaca 21773788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 61
Target Start/End: Complemental strand, 34641034 - 34641004
Alignment:
Q  31 tcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||||||||||||||||||||||||||||    
T  34641034 tcccctcctaaaccctcaatccaaacacacc 34641004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 59
Target Start/End: Complemental strand, 10748332 - 10748299
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacaca 59  Q
    |||||||||||||||||||||| |||||||||||    
T  10748332 tcccttcccctcctaaaccctccatccaaacaca 10748299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 28582710 - 28582751
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||    
T  28582710 ctcccctcccttcccctcctaaatcctcagtccaaacacacc 28582751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 59
Target Start/End: Complemental strand, 31664424 - 31664391
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacaca 59  Q
    |||||||||||| |||||||||||||||||||||    
T  31664424 tcccttcccctcttaaaccctcaatccaaacaca 31664391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 31931972 - 31932005
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacaca 59  Q
    |||||||||||| |||||||||||||||||||||    
T  31931972 tcccttcccctcttaaaccctcaatccaaacaca 31932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 36568950 - 36568901
Alignment:
Q  17 actctcccttcccttcccctcctaaaccctcaatccaaacacaccataag 66  Q
    |||||||| ||| |||| ||||||||||||| ||||||||||||| ||||    
T  36568950 actctcccctccattccactcctaaaccctccatccaaacacaccctaag 36568901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 42772087 - 42772046
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||||||||| |||||| ||||||||||||||||    
T  42772087 ctcccctcccttcccctcttaaaccttcaatccaaacacacc 42772046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 44412404 - 44412363
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| || |||||||||||||||||||||| ||||||||||    
T  44412404 ctcccctctcttcccctcctaaaccctcaattcaaacacacc 44412363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 5903607 - 5903639
Alignment:
Q  33 ccctcctaaaccctcaatccaaacacaccataa 65  Q
    ||||||||||||||| |||||||||||||||||    
T  5903607 ccctcctaaaccctccatccaaacacaccataa 5903639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 9312676 - 9312708
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacac 58  Q
    |||| ||||||||||||||||||||||||||||    
T  9312676 tcccctcccctcctaaaccctcaatccaaacac 9312708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 14898013 - 14897981
Alignment:
Q  26 tcccttcccctcctaaaccctcaatccaaacac 58  Q
    |||||||||||||||||| ||||||||||||||    
T  14898013 tcccttcccctcctaaactctcaatccaaacac 14897981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 30200130 - 30200094
Alignment:
Q  31 tcccctcctaaaccctcaatccaaacacaccataaga 67  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  30200130 tcccctcctaaaccctccatccaaacacaccctaaga 30200094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 59
Target Start/End: Complemental strand, 46978469 - 46978441
Alignment:
Q  31 tcccctcctaaaccctcaatccaaacaca 59  Q
    |||||||||||||||||||||||||||||    
T  46978469 tcccctcctaaaccctcaatccaaacaca 46978441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 15468 - 15507
Alignment:
Q  25 ttcccttcccctcctaaaccctcaatccaaacacaccata 64  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  15468 ttcccttcccttcctaaaccctccatccaaacacaccata 15507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 66
Target Start/End: Complemental strand, 184643 - 184608
Alignment:
Q  31 tcccctcctaaaccctcaatccaaacacaccataag 66  Q
    ||||||||||||||||||||||||||||||| ||||    
T  184643 tcccctcctaaaccctcaatccaaacacaccctaag 184608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 184808 - 184847
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacaca 59  Q
    |||||||||||| ||||||||||||||| |||||||||||    
T  184808 ctcccttccctttccctcctaaaccctccatccaaacaca 184847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 39391 - 39432
Alignment:
Q  20 ctcccttcccttcccctcctaaaccctcaatccaaacacacc 61  Q
    ||||| |||||| |||| ||||||||||||||||||||||||    
T  39391 ctcccctccctttcccttctaaaccctcaatccaaacacacc 39432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 52930 - 52898
Alignment:
Q  29 cttcccctcctaaaccctcaatccaaacacacc 61  Q
    |||||| ||||||||||||||||||||||||||    
T  52930 cttcccatcctaaaccctcaatccaaacacacc 52898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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