View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10771_low_9 (Length: 254)
Name: NF10771_low_9
Description: NF10771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10771_low_9 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 12 - 254
Target Start/End: Original strand, 47261959 - 47262201
Alignment:
| Q |
12 |
tagcataggataggacaacaaaaacttaggaaattttacagatacagtataaccacaactaaatgataatgatctatattctatatatctaccaagtacc |
111 |
Q |
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| T |
47261959 |
tagcataggataggacaacaaaaacttaggaaattttacagatacagtataaccacaactaaatgataatgatctatattctatatatctaccaagtacc |
47262058 |
T |
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| Q |
112 |
aaccacataaagattaatatcatcaaaacttgacaaaagttgaagaaaacagtgtccaagtccaactaaccttatgcttggtccggagtaaccaaagcta |
211 |
Q |
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| T |
47262059 |
aaccaaataaagattaatatcatcaaaacttgacaaaagttgaagaaaacagtgtccaagtccaactaaccttatgcttggtccggagtaaccaaagcta |
47262158 |
T |
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| Q |
212 |
tttctagcaaccaaaccaatagcaaagttgttaaaatcagtgg |
254 |
Q |
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| T |
47262159 |
tttctagcaaccaaaccaatagcaaagttgttaaaatcagtgg |
47262201 |
T |
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