View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10772_3 (Length: 615)

Name: NF10772_3
Description: NF10772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10772_3
NF10772_3
[»] chr8 (39 HSPs)
chr8 (33-449)||(8446111-8446527)
chr8 (468-590)||(22548431-22548553)
chr8 (468-577)||(17103236-17103346)
chr8 (468-590)||(41658987-41659109)
chr8 (468-590)||(22548877-22548999)
chr8 (464-590)||(34308813-34308939)
chr8 (477-577)||(25147691-25147791)
chr8 (468-590)||(12100833-12100954)
chr8 (478-590)||(10844507-10844619)
chr8 (478-577)||(32292096-32292195)
chr8 (468-590)||(27022221-27022342)
chr8 (468-577)||(31283534-31283642)
chr8 (468-573)||(34308361-34308466)
chr8 (468-590)||(22026521-22026644)
chr8 (468-590)||(12827136-12827258)
chr8 (468-590)||(25148109-25148230)
chr8 (477-577)||(21316001-21316100)
chr8 (478-590)||(27926041-27926152)
chr8 (478-590)||(32292539-32292651)
chr8 (478-590)||(2044200-2044312)
chr8 (478-590)||(8080234-8080346)
chr8 (478-578)||(30527374-30527474)
chr8 (480-552)||(6463438-6463510)
chr8 (483-554)||(22705353-22705424)
chr8 (478-577)||(33852150-33852249)
chr8 (484-558)||(25307938-25308012)
chr8 (480-558)||(41913144-41913222)
chr8 (477-558)||(15818907-15818988)
chr8 (477-519)||(9251098-9251140)
chr8 (468-514)||(22840431-22840477)
chr8 (478-524)||(29117444-29117490)
chr8 (478-524)||(34688044-34688090)
chr8 (485-525)||(10729830-10729870)
chr8 (478-522)||(28453548-28453592)
chr8 (477-516)||(3744854-3744893)
chr8 (477-520)||(6466468-6466511)
chr8 (547-590)||(25144914-25144957)
chr8 (477-522)||(12119228-12119273)
chr8 (482-518)||(29971323-29971359)
[»] chr1 (34 HSPs)
chr1 (468-590)||(20056698-20056820)
chr1 (468-590)||(20054418-20054540)
chr1 (468-590)||(20054874-20054996)
chr1 (468-590)||(20055330-20055452)
chr1 (468-590)||(20055786-20055908)
chr1 (468-590)||(20056242-20056364)
chr1 (468-590)||(20057145-20057267)
chr1 (468-590)||(20057601-20057723)
chr1 (468-590)||(46693617-46693739)
chr1 (464-590)||(50002953-50003079)
chr1 (468-590)||(20845543-20845665)
chr1 (468-589)||(50002589-50002710)
chr1 (480-590)||(38341048-38341158)
chr1 (468-590)||(52250348-52250470)
chr1 (468-590)||(52250685-52250807)
chr1 (468-590)||(52251022-52251144)
chr1 (468-590)||(16451815-16451937)
chr1 (468-590)||(16460968-16461090)
chr1 (468-590)||(20053962-20054084)
chr1 (468-577)||(20060222-20060331)
chr1 (480-589)||(35759502-35759611)
chr1 (477-590)||(51372765-51372878)
chr1 (464-560)||(31822997-31823093)
chr1 (464-558)||(43057401-43057495)
chr1 (478-558)||(43056957-43057037)
chr1 (478-577)||(7547792-7547891)
chr1 (468-525)||(35759946-35760003)
chr1 (517-577)||(35760845-35760905)
chr1 (478-577)||(23180885-23180984)
chr1 (468-519)||(49996562-49996613)
chr1 (478-520)||(39582553-39582595)
chr1 (546-589)||(16907377-16907420)
chr1 (477-511)||(28181384-28181418)
chr1 (546-590)||(8278099-8278143)
[»] scaffold0243 (1 HSPs)
scaffold0243 (468-590)||(1362-1484)
[»] chr6 (36 HSPs)
chr6 (468-590)||(20850463-20850585)
chr6 (468-590)||(17027413-17027535)
chr6 (468-590)||(9352204-9352326)
chr6 (468-590)||(13492474-13492597)
chr6 (468-577)||(7912033-7912142)
chr6 (464-590)||(13492931-13493058)
chr6 (468-590)||(13191395-13191517)
chr6 (477-589)||(7912453-7912565)
chr6 (478-577)||(17731001-17731100)
chr6 (468-587)||(23776585-23776704)
chr6 (477-573)||(20896578-20896675)
chr6 (468-577)||(23986199-23986308)
chr6 (477-590)||(28780252-28780365)
chr6 (478-577)||(3652678-3652777)
chr6 (478-558)||(2890731-2890811)
chr6 (478-577)||(20126074-20126173)
chr6 (478-590)||(17851060-17851172)
chr6 (478-557)||(21311690-21311769)
chr6 (478-589)||(21312114-21312225)
chr6 (479-577)||(2720456-2720554)
chr6 (478-532)||(2891186-2891240)
chr6 (468-572)||(2681102-2681202)
chr6 (478-577)||(3653057-3653152)
chr6 (468-578)||(9440739-9440849)
chr6 (478-532)||(11062029-11062083)
chr6 (468-520)||(27334305-27334357)
chr6 (468-520)||(27395045-27395097)
chr6 (495-590)||(11062427-11062522)
chr6 (530-590)||(16520110-16520170)
chr6 (477-524)||(31415980-31416026)
chr6 (478-558)||(14771611-14771691)
chr6 (468-542)||(28583154-28583228)
chr6 (477-590)||(1991695-1991808)
chr6 (478-519)||(3884984-3885025)
chr6 (477-525)||(15929346-15929394)
chr6 (502-558)||(33774918-33774974)
[»] chr5 (40 HSPs)
chr5 (468-590)||(17445337-17445459)
chr5 (477-577)||(189223-189323)
chr5 (468-590)||(2474547-2474669)
chr5 (468-590)||(3886483-3886605)
chr5 (468-590)||(34371754-34371876)
chr5 (478-576)||(22557125-22557224)
chr5 (468-587)||(15512894-15513013)
chr5 (468-590)||(3886939-3887061)
chr5 (468-590)||(42788528-42788650)
chr5 (478-576)||(22556692-22556791)
chr5 (468-590)||(8641917-8642038)
chr5 (468-577)||(8391204-8391313)
chr5 (480-590)||(34372210-34372320)
chr5 (478-577)||(1822061-1822160)
chr5 (468-590)||(2474101-2474213)
chr5 (478-590)||(10927295-10927407)
chr5 (478-590)||(29679999-29680111)
chr5 (506-577)||(21886066-21886137)
chr5 (477-590)||(24182137-24182250)
chr5 (478-558)||(20039367-20039447)
chr5 (468-590)||(2193958-2194068)
chr5 (468-556)||(27646717-27646805)
chr5 (480-539)||(187751-187810)
chr5 (477-590)||(30720151-30720264)
chr5 (467-587)||(18750077-18750197)
chr5 (477-577)||(30684902-30685002)
chr5 (478-530)||(1880278-1880330)
chr5 (482-558)||(38063725-38063800)
chr5 (510-590)||(10926870-10926950)
chr5 (479-590)||(11757174-11757285)
chr5 (478-577)||(20858434-20858532)
chr5 (484-578)||(18304585-18304679)
chr5 (493-578)||(16370618-16370703)
chr5 (477-574)||(30684447-30684544)
chr5 (478-558)||(8366640-8366719)
chr5 (468-511)||(21883967-21884010)
chr5 (477-532)||(34867978-34868033)
chr5 (479-524)||(5066781-5066826)
chr5 (469-519)||(21041410-21041460)
chr5 (546-590)||(4102938-4102982)
[»] chr4 (49 HSPs)
chr4 (477-590)||(49998778-49998891)
chr4 (477-590)||(35871769-35871882)
chr4 (468-577)||(7678498-7678607)
chr4 (478-590)||(44470761-44470873)
chr4 (468-573)||(4127294-4127399)
chr4 (477-569)||(4127774-4127866)
chr4 (478-590)||(23943128-23943240)
chr4 (468-590)||(24629312-24629431)
chr4 (477-589)||(40607074-40607186)
chr4 (478-590)||(44471211-44471323)
chr4 (468-577)||(23350159-23350268)
chr4 (500-590)||(12691907-12691997)
chr4 (497-590)||(50814730-50814823)
chr4 (478-577)||(21067437-21067536)
chr4 (479-577)||(14572041-14572139)
chr4 (468-557)||(15268049-15268138)
chr4 (478-590)||(1645635-1645747)
chr4 (482-558)||(9423748-9423824)
chr4 (478-590)||(27578172-27578284)
chr4 (478-577)||(3169361-3169460)
chr4 (478-577)||(50398424-50398523)
chr4 (478-550)||(7381449-7381521)
chr4 (478-558)||(21067905-21067985)
chr4 (478-590)||(23942675-23942787)
chr4 (468-590)||(14571564-14571686)
chr4 (477-577)||(27578342-27578442)
chr4 (478-574)||(27578795-27578891)
chr4 (464-590)||(14351937-14352063)
chr4 (477-590)||(8467698-8467806)
chr4 (468-537)||(35477855-35477924)
chr4 (478-590)||(50398880-50398991)
chr4 (478-537)||(4414273-4414332)
chr4 (478-563)||(53854733-53854818)
chr4 (468-576)||(17628667-17628775)
chr4 (477-577)||(27026657-27026757)
chr4 (468-590)||(13266228-13266350)
chr4 (477-574)||(1464305-1464401)
chr4 (504-577)||(26200205-26200278)
chr4 (477-558)||(31817023-31817104)
chr4 (542-590)||(24628927-24628975)
chr4 (539-590)||(21220278-21220329)
chr4 (477-523)||(52048562-52048608)
chr4 (478-523)||(33294778-33294823)
chr4 (478-515)||(53996016-53996053)
chr4 (477-525)||(5810041-5810089)
chr4 (478-516)||(2499388-2499426)
chr4 (468-509)||(13265859-13265900)
chr4 (480-520)||(13613786-13613826)
chr4 (478-590)||(51331169-51331279)
[»] scaffold0499 (1 HSPs)
scaffold0499 (468-590)||(1933-2055)
[»] scaffold0322 (1 HSPs)
scaffold0322 (468-590)||(19108-19230)
[»] chr7 (39 HSPs)
chr7 (468-590)||(2941639-2941761)
chr7 (468-590)||(7646360-7646482)
chr7 (468-590)||(28495996-28496118)
chr7 (468-590)||(34405473-34405595)
chr7 (477-590)||(7646557-7646670)
chr7 (477-590)||(18833428-18833541)
chr7 (468-590)||(2193398-2193520)
chr7 (468-590)||(9125101-9125223)
chr7 (477-590)||(13122395-13122509)
chr7 (468-590)||(36422394-36422515)
chr7 (468-590)||(13125017-13125140)
chr7 (468-590)||(42515686-42515808)
chr7 (477-590)||(2189286-2189399)
chr7 (478-590)||(2466066-2466178)
chr7 (464-577)||(6718953-6719065)
chr7 (477-590)||(43776181-43776294)
chr7 (478-577)||(29038912-29039011)
chr7 (478-558)||(3305240-3305320)
chr7 (468-552)||(43233137-43233221)
chr7 (478-590)||(22529127-22529239)
chr7 (478-590)||(35474013-35474125)
chr7 (468-590)||(28495501-28495612)
chr7 (478-590)||(42515234-42515346)
chr7 (512-590)||(2465875-2465953)
chr7 (478-590)||(679958-680071)
chr7 (478-523)||(6747968-6748013)
chr7 (478-525)||(2611551-2611598)
chr7 (468-539)||(36422575-36422646)
chr7 (477-590)||(5406478-5406592)
chr7 (478-518)||(11372657-11372697)
chr7 (478-590)||(29357348-29357460)
chr7 (468-519)||(26419117-26419168)
chr7 (477-523)||(7461273-7461319)
chr7 (478-524)||(31743781-31743827)
chr7 (478-522)||(6747498-6747542)
chr7 (546-581)||(1628864-1628899)
chr7 (478-525)||(31406481-31406528)
chr7 (478-524)||(36015361-36015407)
chr7 (480-520)||(9623419-9623459)
[»] chr2 (37 HSPs)
chr2 (468-590)||(25337879-25338001)
chr2 (468-590)||(32377789-32377911)
chr2 (468-577)||(32377598-32377707)
chr2 (477-577)||(33771156-33771256)
chr2 (468-590)||(24818468-24818589)
chr2 (468-574)||(30966848-30966954)
chr2 (477-577)||(29259511-29259611)
chr2 (468-577)||(30966389-30966498)
chr2 (478-590)||(16379535-16379647)
chr2 (468-577)||(5399699-5399808)
chr2 (478-590)||(16379079-16379191)
chr2 (500-590)||(41754431-41754521)
chr2 (478-590)||(1912666-1912778)
chr2 (482-590)||(8256668-8256776)
chr2 (481-558)||(15620072-15620149)
chr2 (477-590)||(30963154-30963267)
chr2 (481-577)||(15639889-15639985)
chr2 (477-590)||(30961774-30961887)
chr2 (479-558)||(8181254-8181333)
chr2 (478-557)||(33175132-33175210)
chr2 (478-558)||(25433948-25434028)
chr2 (478-525)||(36924373-36924420)
chr2 (484-558)||(1707215-1707289)
chr2 (478-524)||(20502172-20502218)
chr2 (477-569)||(18875876-18875968)
chr2 (478-587)||(27882818-27882927)
chr2 (477-590)||(30963611-30963724)
chr2 (544-590)||(11388329-11388375)
chr2 (544-590)||(11394675-11394721)
chr2 (480-577)||(13191129-13191226)
chr2 (477-508)||(29804871-29804902)
chr2 (478-517)||(38898817-38898856)
chr2 (477-523)||(83226-83272)
chr2 (468-538)||(11389677-11389747)
chr2 (468-538)||(11406338-11406408)
chr2 (477-522)||(26865144-26865189)
chr2 (477-565)||(8074059-8074147)
[»] chr3 (45 HSPs)
chr3 (468-577)||(39653319-39653428)
chr3 (477-577)||(8067435-8067535)
chr3 (468-590)||(13150436-13150558)
chr3 (468-590)||(11179916-11180038)
chr3 (468-590)||(14820296-14820418)
chr3 (468-590)||(28561888-28562009)
chr3 (468-590)||(50347888-50348010)
chr3 (477-590)||(14814091-14814204)
chr3 (468-590)||(27187211-27187334)
chr3 (468-590)||(13149981-13150103)
chr3 (468-590)||(32227103-32227225)
chr3 (468-590)||(32386616-32386738)
chr3 (477-577)||(16811080-16811180)
chr3 (468-590)||(16811523-16811643)
chr3 (478-590)||(32227642-32227754)
chr3 (468-590)||(31284158-31284280)
chr3 (478-577)||(20885009-20885108)
chr3 (478-590)||(4067252-4067364)
chr3 (478-590)||(37045177-37045286)
chr3 (478-590)||(25238576-25238688)
chr3 (478-577)||(25230597-25230696)
chr3 (478-577)||(25238184-25238283)
chr3 (479-577)||(30529842-30529939)
chr3 (464-577)||(3899955-3900068)
chr3 (477-577)||(25248266-25248367)
chr3 (478-531)||(2911285-2911338)
chr3 (468-525)||(41473748-41473805)
chr3 (480-577)||(41474152-41474249)
chr3 (478-577)||(25230140-25230239)
chr3 (478-577)||(25237727-25237826)
chr3 (478-525)||(25239019-25239066)
chr3 (467-574)||(53150693-53150800)
chr3 (478-519)||(25230989-25231030)
chr3 (532-588)||(41472444-41472500)
chr3 (478-577)||(15388298-15388397)
chr3 (478-577)||(15392665-15392764)
chr3 (478-577)||(15405701-15405800)
chr3 (478-577)||(15417526-15417625)
chr3 (478-525)||(18318862-18318909)
chr3 (480-590)||(15377426-15377536)
chr3 (478-590)||(25802440-25802552)
chr3 (546-577)||(29224479-29224510)
chr3 (468-525)||(7477398-7477455)
chr3 (468-525)||(7494088-7494145)
chr3 (480-516)||(26436264-26436300)
[»] scaffold0020 (1 HSPs)
scaffold0020 (468-590)||(107345-107467)
[»] scaffold0277 (1 HSPs)
scaffold0277 (477-590)||(14593-14706)
[»] scaffold0022 (4 HSPs)
scaffold0022 (478-590)||(163213-163325)
scaffold0022 (477-590)||(163025-163138)
scaffold0022 (468-590)||(162559-162682)
scaffold0022 (478-558)||(69707-69787)
[»] scaffold1519 (1 HSPs)
scaffold1519 (468-590)||(1583-1705)
[»] scaffold0168 (1 HSPs)
scaffold0168 (468-590)||(2884-3006)
[»] scaffold0018 (1 HSPs)
scaffold0018 (468-590)||(10442-10563)
[»] scaffold0040 (1 HSPs)
scaffold0040 (468-577)||(2092-2201)
[»] scaffold0389 (1 HSPs)
scaffold0389 (468-590)||(13415-13537)
[»] scaffold0024 (1 HSPs)
scaffold0024 (480-590)||(105862-105972)
[»] scaffold0002 (2 HSPs)
scaffold0002 (468-590)||(154899-155021)
scaffold0002 (468-523)||(154511-154566)
[»] scaffold0217 (1 HSPs)
scaffold0217 (468-577)||(465-574)
[»] scaffold0333 (3 HSPs)
scaffold0333 (478-574)||(4719-4814)
scaffold0333 (478-574)||(5179-5274)
scaffold0333 (478-534)||(5320-5377)
[»] scaffold0047 (2 HSPs)
scaffold0047 (481-590)||(17493-17602)
scaffold0047 (478-590)||(18027-18139)
[»] scaffold0005 (2 HSPs)
scaffold0005 (479-577)||(245237-245335)
scaffold0005 (468-590)||(245690-245812)
[»] scaffold0557 (1 HSPs)
scaffold0557 (478-531)||(2297-2350)
[»] scaffold0137 (1 HSPs)
scaffold0137 (483-577)||(7097-7190)
[»] scaffold0071 (1 HSPs)
scaffold0071 (478-577)||(44613-44712)
[»] scaffold0126 (1 HSPs)
scaffold0126 (478-524)||(37205-37251)
[»] scaffold0065 (1 HSPs)
scaffold0065 (468-509)||(62989-63030)
[»] scaffold0442 (1 HSPs)
scaffold0442 (478-506)||(1-29)
[»] scaffold0036 (1 HSPs)
scaffold0036 (478-522)||(26278-26322)


Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-147; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 33 - 449
Target Start/End: Original strand, 8446111 - 8446527
Alignment:
Q  33 gtgatactagattgaagtatcgtataaagaatagctccaagtacatcaaagaaactttgtacaaggtcaaccaaagattcttcaaaaggtttcaccaact 132  Q
    ||||||||||||||||||||| |||||||||||| | ||||| ||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||| |    
T  8446111 gtgatactagattgaagtatcttataaagaatagttacaagtgcatcagagaaactctgtataaggtcaaccaaagattcttcaaaaggattcaccaatt 8446210  T
Q  133 tttgtagattcagattaaaactatggtcattgattttgcttctacaaagaggacatgtagtattgttcctcagccaaacaccaatacaatcagcatgata 232  Q
    |||| |||||||||||| ||||||||| | ||||||||||||||||||| |||||||| ||||||||| ||| |||| ||||||||||||||||||||||    
T  8446211 tttgcagattcagattataactatggttactgattttgcttctacaaagtggacatgtggtattgttcttcaaccaagcaccaatacaatcagcatgata 8446310  T
Q  233 tctatggttacataaatgtaacatcctaactttttgccctctacaaatctggcttaaacaaactgaacaaaaatcactttcactttgatctacttccttc 332  Q
    |||||| | ||||||| |||| | ||||||||||| ||||||||| || ||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  8446311 tctatgatcacataaaggtaataccctaactttttcccctctacacatttggcttaaacaaactgaacaacaatcactttcactttgatctatttccttc 8446410  T
Q  333 actgaaccaccaacattgaaacaattcttgtagattttatgaagagtcttgattatgttttcttgaaatgaataagccataagagcaacggttgtgagga 432  Q
    | ||| |||||||||| |||| |||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||||||  |||||||||    
T  8446411 attgagccaccaacatagaaataattcttgtagagtttatcaagagtcttaattatgttttcttgaaatgaataagctataagagcaactattgtgagga 8446510  T
Q  433 atttgaggatggttgtt 449  Q
    |||||||||||||||||    
T  8446511 atttgaggatggttgtt 8446527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 22548431 - 22548553
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  22548431 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaaacttcccggtaggtcacccatcccaaaattgc 22548530  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  22548531 tccaagtcaagcacgcttaactg 22548553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 468 - 577
Target Start/End: Complemental strand, 17103346 - 17103236
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtc-acccatcccaaaattg 566  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  17103346 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcaacccatcccaaaattg 17103247  T
Q  567 ctccaagtcaa 577  Q
    |||||||||||    
T  17103246 ctccaagtcaa 17103236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 41658987 - 41659109
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| ||||||||||||| |||||||||||||    
T  41658987 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttacagggaaacttcccggtaggtcacctatcccaaaattgc 41659086  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||| ||| |||||||    
T  41659087 tccaagtcaaacacgcttaactg 41659109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 22548877 - 22548999
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||| ||||||||||||| ||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||    
T  22548877 gactgaccccacaaaccaacacgagtctgttcagcgtgttttatcctcactcgcacgcttactgggaaacttcccggtaggtcacccatcccaaaattgc 22548976  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  22548977 tccaagtcaagcacgcttaactg 22548999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 464 - 590
Target Start/End: Original strand, 34308813 - 34308939
Alignment:
Q  464 tgctgactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaa 563  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| ||||||||||||||||| |||||    
T  34308813 tgctgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacatgcttaccgggaaacttcccggtaggtcacccatctcaaaa 34308912  T
Q  564 ttgctccaagtcaaatacgtttaactg 590  Q
    |||||||||| |||  ||| |||||||    
T  34308913 ttgctccaagccaagcacgcttaactg 34308939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 477 - 577
Target Start/End: Complemental strand, 25147791 - 25147691
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| || | |||||||| ||||||||||||||||||||||||||||||||||||    
T  25147791 cacaaaccaacacgagtcttttcagcgtgttttgtactcactcgcacgcttatcaggaaacttcccggtaggtcacccatcccaaaattgctccaagtca 25147692  T
Q  577 a 577  Q
    |    
T  25147691 a 25147691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 12100954 - 12100833
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||| |||||||||||||||| ||||||||||    
T  12100954 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacgaggaaacttcccggtaggtcacccat-ccaaaattgc 12100856  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  12100855 tccaagtcaagcacgcttaactg 12100833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 10844507 - 10844619
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||| |||||||||||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||||||||||||||||||||| ||||||||    
T  10844507 acaaacaaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttaccgagaaacttcccggtaggtcacccatcccaaaattgcttcaagtcaa 10844606  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  10844607 gcacgcttaactg 10844619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 32292195 - 32292096
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| || | | |||||||||||    
T  32292195 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatccaaagactactccaagtcaa 32292096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 27022221 - 27022342
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||| |||||||||||||||||||||||||| ||||   ||||||||| ||||||||||||||||||||||||    
T  27022221 gactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcgcacgcttacc-aaaaactttccagtaggtcacccatcccaaaattgc 27022319  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  27022320 tccaagtcaagcacgcttaactg 27022342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 31283534 - 31283642
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||    
T  31283534 gactgaccccacaaaccaacacgagtcttttcaacgcgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccat-ccaaaattgc 31283632  T
Q  568 tccaagtcaa 577  Q
    || |||||||    
T  31283633 tcaaagtcaa 31283642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 468 - 573
Target Start/End: Original strand, 34308361 - 34308466
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||| || || ||||||||||||| ||||||||||||||||| |||||||||    
T  34308361 gactgaccccacaaaccagcacgagtcttttcagcgtgttttgtcctcactcacatgcttaccgggaaacttcccggtaggtcacccatctcaaaattgc 34308460  T
Q  568 tccaag 573  Q
    ||||||    
T  34308461 tccaag 34308466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 22026644 - 22026521
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgtttt-gtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattg 566  Q
    |||||||  ||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| ||| ||||| ||||||||||| ||||    
T  22026644 gactgaccccacaaaccaacacgagtcttttcagtgtgtttttgtcctcactcgcacgcttaccgggaaacttcccgataggttacccatcccaatattg 22026545  T
Q  567 ctccaagtcaaatacgtttaactg 590  Q
    |||||||||||  ||| |||||||    
T  22026544 ctccaagtcaagcacgcttaactg 22026521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 12827136 - 12827258
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||| |  |||||||  |||||||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  12827136 gactgaccccacaaaccaacacgagtcttttaaaagtgttttaacctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgc 12827235  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  12827236 tccaagtcaagcacgcttaactg 12827258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 25148230 - 25148109
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||||||||||||| |||||||||||||  || | |||||||| |||||||||||||||||||||||||||    
T  25148230 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgacctcactcgcacgtttatc-ggaaacttcccggtaggtcacccatcccaaaattgc 25148132  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    || |||||||  ||| |||||||    
T  25148131 tcaaagtcaagcacgcttaactg 25148109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 477 - 577
Target Start/End: Original strand, 21316001 - 21316100
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||| | |||||||| ||||||||||    
T  21316001 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacc-ggaaacttcgcggtaggtcacccttaccaaaattactccaagtca 21316099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 478 - 590
Target Start/End: Complemental strand, 27926152 - 27926041
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||| ||||||  ||||||||||| |||||||||||||||||    
T  27926152 acaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacacttaccgggaaacttcccggtacctcacccatccc-aaattgctccaagtcaa 27926054  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  27926053 gcacgcttaactg 27926041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 590
Target Start/End: Complemental strand, 32292651 - 32292539
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||||| |||||||||| || | | |||||||||||    
T  32292651 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccggaaaacttcccggtagatcacccatccaaagactactccaagtcaa 32292552  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  32292551 gcacgcttaactg 32292539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 590
Target Start/End: Complemental strand, 2044312 - 2044200
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||| ||  |||||||||||||| || | | |||||||||||    
T  2044312 acaaaccaatacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaacttcccattaggtcacccatccaaagactactccaagtcaa 2044213  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  2044212 gcacgcttaactg 2044200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 8080234 - 8080346
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |  |||||| |||||||| || | | |||||||||||    
T  8080234 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgagaaacttcctagtaggttacccatccaaagactactccaagtcaa 8080333  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  8080334 gcacgcttaactg 8080346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 578
Target Start/End: Original strand, 30527374 - 30527474
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||  |||| ||||| |||||||||| || ||| ||| |||||||    
T  30527374 acaaatcaacacgagtcttttcagcgtgttttatcctcactcgcacgcttaccgggaagttttcaggtagatcacccatccaaagattactcaaagtcaa 30527473  T
Q  578 a 578  Q
    |    
T  30527474 a 30527474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 480 - 552
Target Start/End: Original strand, 6463438 - 6463510
Alignment:
Q  480 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcac 552  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  |||| ||||||||||    
T  6463438 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgagaagttttctggtaggtcac 6463510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 483 - 554
Target Start/End: Complemental strand, 22705424 - 22705353
Alignment:
Q  483 ccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcaccc 554  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||| || |||||| ||||||||||||||    
T  22705424 ccaacacgagtcttttcagcgtgttttgtcctcactggcacgcttactggaaaacttcccggtaggtcaccc 22705353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 33852150 - 33852249
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||| ||||| ||||||||| |||||||||||||||||||||||||| || |  ||||||||||| |||||||||||||| || | | |||||||||||    
T  33852150 acaaatcaacatgagtctttttagcgtgttttgtcctcactcgcacgcttatcatgaaactttccgataggtcacccatccaaagactactccaagtcaa 33852249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 558
Target Start/End: Complemental strand, 25308012 - 25307938
Alignment:
Q  484 caacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    |||||||||||||||||||||  ||||||||||||||||||| | |||  ||||||||  ||| |||||||||||    
T  25308012 caacacgagtcttttcagcgtactttgtcctcactcgcacgcttgccgaaaaactttcaagtacgtcacccatcc 25307938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 480 - 558
Target Start/End: Complemental strand, 41913222 - 41913144
Alignment:
Q  480 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    |||| ||||||||| |||||| ||||||||||||||||| |||||| ||||  |||||||||  ||||||||| |||||    
T  41913222 aaactaacacgagttttttcaacgtgttttgtcctcacttgcacgcttaccaagaaactttctagtaggtcactcatcc 41913144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 558
Target Start/End: Original strand, 15818907 - 15818988
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||||| | |  |||||||||| || | ||||| |||||||    
T  15818907 cacaaaccaacacaagtcttttcagtgtgctttgtcctcactcgcacacttttcgggaaacttcccagaaggtcgcccatcc 15818988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 477 - 519
Target Start/End: Complemental strand, 9251140 - 9251098
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 519  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  9251140 cacaaaccaacacaagttttttcagcgtgttttgtcctcactc 9251098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 514
Target Start/End: Original strand, 22840431 - 22840477
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcct 514  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||||    
T  22840431 gactgaccatacaaaccaacacgagtcttttcagtgtgttttgtcct 22840477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 478 - 524
Target Start/End: Complemental strand, 29117490 - 29117444
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacg 524  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||    
T  29117490 acaaaccaacacgagtcttttcaggatgatttgtcctcactcgcacg 29117444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 478 - 524
Target Start/End: Complemental strand, 34688090 - 34688044
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacg 524  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  34688090 acaaaccaacatgagtcttttcaacgtgttttgtcctcattcgcacg 34688044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 525
Target Start/End: Complemental strand, 10729870 - 10729830
Alignment:
Q  485 aacacgagtcttttcagcgtgttttgtcctcactcgcacgc 525  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  10729870 aacacgagtcttttcagcgtgctttgtccacactcgcacgc 10729830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 522
Target Start/End: Complemental strand, 28453592 - 28453548
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgca 522  Q
    |||||| ||||||| |||||||||| |||||||||||||||||||    
T  28453592 acaaacaaacacgactcttttcagcatgttttgtcctcactcgca 28453548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 516
Target Start/End: Complemental strand, 3744893 - 3744854
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctca 516  Q
    ||||||||||||||||||||||||| ||||||||| ||||    
T  3744893 cacaaaccaacacgagtcttttcagtgtgttttgttctca 3744854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 520
Target Start/End: Complemental strand, 6466511 - 6466468
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 520  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||    
T  6466511 cacaaaccaacacaagtctttttagcgtgctttgtcctcactcg 6466468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 547 - 590
Target Start/End: Complemental strand, 25144957 - 25144914
Alignment:
Q  547 ggtcacccatcccaaaattgctccaagtcaaatacgtttaactg 590  Q
    |||||||||||||||||||||||||||||||  ||| |||||||    
T  25144957 ggtcacccatcccaaaattgctccaagtcaagcacgcttaactg 25144914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 522
Target Start/End: Original strand, 12119228 - 12119273
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgca 522  Q
    ||||||||||||||||| ||||||  ||| ||||||||||||||||    
T  12119228 cacaaaccaacacgagtattttcaatgtgctttgtcctcactcgca 12119273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 482 - 518
Target Start/End: Original strand, 29971323 - 29971359
Alignment:
Q  482 accaacacgagtcttttcagcgtgttttgtcctcact 518  Q
    |||||||||||| |||||||| |||||||||||||||    
T  29971323 accaacacgagttttttcagcatgttttgtcctcact 29971359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 1e-48; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 20056698 - 20056820
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  20056698 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 20056797  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||| ||| |||||||    
T  20056798 tccaagtcaaacacgcttaactg 20056820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 20054418 - 20054540
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  20054418 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 20054517  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  20054518 tccaagtcaagcacgcttaactg 20054540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 20054874 - 20054996
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  20054874 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 20054973  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  20054974 tccaagtcaagcacgcttaactg 20054996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 20055330 - 20055452
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  20055330 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 20055429  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  20055430 tccaagtcaagcacgcttaactg 20055452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 20055786 - 20055908
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  20055786 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 20055885  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  20055886 tccaagtcaagcacgcttaactg 20055908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 20056242 - 20056364
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  20056242 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 20056341  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  20056342 tccaagtcaagcacgcttaactg 20056364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 20057145 - 20057267
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  20057145 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 20057244  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  20057245 tccaagtcaagcacgcttaactg 20057267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 20057601 - 20057723
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  20057601 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 20057700  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  20057701 tccaagtcaagcacgcttaactg 20057723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 46693617 - 46693739
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  46693617 gactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgcataccgggaaactttccggtaggtcacccatcccaaaattgc 46693716  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  46693717 tccaagtcaagcacgcttaactg 46693739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 464 - 590
Target Start/End: Original strand, 50002953 - 50003079
Alignment:
Q  464 tgctgactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaa 563  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  50002953 tgctgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatccaaaaa 50003052  T
Q  564 ttgctccaagtcaaatacgtttaactg 590  Q
    ||||||||||||||  ||| |||||||    
T  50003053 ttgctccaagtcaagcacgcttaactg 50003079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 20845543 - 20845665
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |    
T  20845543 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaatttc 20845642  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  20845643 tccaagtcaagcacgcttaactg 20845665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 468 - 589
Target Start/End: Original strand, 50002589 - 50002710
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||||||    
T  50002589 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggggaacttcccggtaggtcatccatcccaaaattgc 50002688  T
Q  568 tccaagtcaaatacgtttaact 589  Q
    ||||||||||| ||| ||||||    
T  50002689 tccaagtcaaacacgcttaact 50002710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 480 - 590
Target Start/End: Complemental strand, 38341158 - 38341048
Alignment:
Q  480 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaat 579  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||      
T  38341158 aaaccaacacgagtcttttccgcgtgttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaaaattgctccaagtcaagc 38341059  T
Q  580 acgtttaactg 590  Q
    ||| |||||||    
T  38341058 acgcttaactg 38341048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 52250470 - 52250348
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||| ||||||||||    
T  52250470 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccattccaaaattgc 52250371  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    | ||||||||  ||| |||||||    
T  52250370 ttcaagtcaagcacgcttaactg 52250348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 52250807 - 52250685
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  52250807 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgc 52250708  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    | ||||||||  ||| |||||||    
T  52250707 ttcaagtcaagcacgcttaactg 52250685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 52251144 - 52251022
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  52251144 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgc 52251045  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    | ||||||||  ||| |||||||    
T  52251044 ttcaagtcaagcacgcttaactg 52251022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 16451815 - 16451937
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||||||||||||||| |||| ||||||| ||  || ||||||||||||||||||||||||||||||||||    
T  16451815 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcatcacgcgcacgcttattggaaaactttccggtaggtcacccatcccaaaattgc 16451914  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  16451915 tccaagtcaagcacgcttaactg 16451937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 16460968 - 16461090
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||||||||||||||| |||| ||||||| ||  || ||||||||||||||||||||||||||||||||||    
T  16460968 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcatcacgcgcacgcttattggaaaactttccggtaggtcacccatcccaaaattgc 16461067  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  16461068 tccaagtcaagcacgcttaactg 16461090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 20053962 - 20054084
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||| |||| | |||||| |||||||||||||||||||||||||||    
T  20053962 gactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccagaaaacttcccggtaggtcacccatcccaaaattgc 20054061  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||| ||||||  ||| |||||||    
T  20054062 tcctagtcaagcacgcttaactg 20054084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 20060222 - 20060331
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||| || |||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||     
T  20060222 gactgaccccacaaaccaacacgagtctttccatcgtgttttgtcctcactcgcacgcttaccggaaaacttcccggtaggtcacccatcccaaaattga 20060321  T
Q  568 tccaagtcaa 577  Q
    ||||||||||    
T  20060322 tccaagtcaa 20060331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 480 - 589
Target Start/End: Original strand, 35759502 - 35759611
Alignment:
Q  480 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaat 579  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||| ||||||||||||| |||||||||| ||||||||||||      
T  35759502 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgaaaaacttcccggtaggtcaccaatcccaaaatagctccaagtcaagc 35759601  T
Q  580 acgtttaact 589  Q
    ||||||||||    
T  35759602 acgtttaact 35759611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 477 - 590
Target Start/End: Original strand, 51372765 - 51372878
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| |||||  |||||| | | ||||||||||||||||||||||||| ||||||    
T  51372765 cacaaaccaacacgagtcttttcagcggattttgtcctcactcgcacgcttaccgaaaaacttcctgataggtcacccatcccaaaattgctcaaagtca 51372864  T
Q  577 aatacgtttaactg 590  Q
    |  ||| |||||||    
T  51372865 agcacgcttaactg 51372878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 464 - 560
Target Start/End: Original strand, 31822997 - 31823093
Alignment:
Q  464 tgctgactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatccca 560  Q
    |||||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||| || ||||| ||||||| || |||||||||||||||||    
T  31822997 tgctgactgaccccacaaatcaacacgagtcttttcagcatgttttgtcctcactcgcatgcttaccgagaaacttcccagtaggtcacccatccca 31823093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 464 - 558
Target Start/End: Original strand, 43057401 - 43057495
Alignment:
Q  464 tgctgactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||| ||||||| || || ||||||||||||| || |||||||||| ||||    
T  43057401 tgctgactgacaatacaaaccaacacaagtctttttagcgtgttttgttctcactcacatgcttaccgggaaacttcccagtaggtcaccgatcc 43057495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 558
Target Start/End: Original strand, 43056957 - 43057037
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||| || ||||||||||||| || |||||||||||||||    
T  43056957 acaaaccaacacaagttttttcagtgtgttttgtcctcactcgcatgcttaccgggaaacttcccagtaggtcacccatcc 43057037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 7547891 - 7547792
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||| ||||||||| |||||||| |||||||||||| |||||||||| || ||  ||||||||||||||||||||||||| || | | |||||||||||    
T  7547891 acaaatcaacacgagacttttcagtgtgttttgtccttactcgcacgcttatcgaaaaactttccggtaggtcacccatccaaacactactccaagtcaa 7547792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 468 - 525
Target Start/End: Original strand, 35759946 - 35760003
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgc 525  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35759946 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcgctcgcacgc 35760003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 517 - 577
Target Start/End: Original strand, 35760845 - 35760905
Alignment:
Q  517 ctcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||||    
T  35760845 ctcgcacgcttaccgggaaacttcccgataggttacccatcccaaaattgctccaagtcaa 35760905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 23180984 - 23180885
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||  |||||||||||| ||||||||| ||||||||||   |   |  ||||||||| | |||| ||||||||||||||| |||||||||||    
T  23180984 acaaaccaacattagtcttttcagcatgttttgtcgtcactcgcacattttttgaaaaactttccagaaggtaacccatcccaaaatttctccaagtcaa 23180885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 519
Target Start/End: Original strand, 49996562 - 49996613
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 519  Q
    |||||||  ||||||| |||| ||||||||||||||||||||||||||||||    
T  49996562 gactgaccccacaaactaacaagagtcttttcagcgtgttttgtcctcactc 49996613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 478 - 520
Target Start/End: Complemental strand, 39582595 - 39582553
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 520  Q
    ||||||||| ||||||||| |||||||||||||||||||||||    
T  39582595 acaaaccaaaacgagtcttctcagcgtgttttgtcctcactcg 39582553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 16907420 - 16907377
Alignment:
Q  546 aggtcacccatcccaaaattgctccaagtcaaatacgtttaact 589  Q
    |||||||||||| |||||||||||||||||||| ||| ||||||    
T  16907420 aggtcacccatctcaaaattgctccaagtcaaacacgcttaact 16907377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 28181384 - 28181418
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgt 511  Q
    ||||||||||||||||||||||||| |||||||||    
T  28181384 cacaaaccaacacgagtcttttcagagtgttttgt 28181418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 546 - 590
Target Start/End: Complemental strand, 8278143 - 8278099
Alignment:
Q  546 aggtcacccatcccaaaattgctccaagtcaaatacgtttaactg 590  Q
    ||||||||||||||||||||||| ||||||||  ||| |||||||    
T  8278143 aggtcacccatcccaaaattgcttcaagtcaagcacgcttaactg 8278099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 95; Significance: 4e-46; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 1484 - 1362
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  1484 gactgacgccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 1385  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  1384 tccaagtcaagcacgcttaactg 1362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 4e-46; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 20850585 - 20850463
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  20850585 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 20850486  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  20850485 tccaagtcaagcacgcttaactg 20850463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 17027413 - 17027535
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  17027413 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 17027512  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  17027513 tccaagtcaagcacgcttaactg 17027535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 9352326 - 9352204
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| | |||||||||||||||||||||||||    
T  9352326 gactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccgagaaacttccaggtaggtcacccatcccaaaattgc 9352227  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  9352226 tccaagtcaagcacgcttaactg 9352204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 13492597 - 13492474
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgt-cctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattg 566  Q
    |||||||  ||||||||||||||||||||||||||||||||| | |||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  13492597 gactgaccccacaaaccaacacgagtcttttcagcgtgtttttttcctcactcgcacgcttactgggaaacttcccggtaggtcacccatcccaaaattg 13492498  T
Q  567 ctccaagtcaaatacgtttaactg 590  Q
    |||||||||||  ||| |||||||    
T  13492497 ctccaagtcaagcacgcttaactg 13492474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 468 - 577
Target Start/End: Complemental strand, 7912142 - 7912033
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||| |||||||||||||||||||||||||||||||| || ||||| ||| ||| |||||||||||||||||||||||||||    
T  7912142 gactgaccccacaaaccaacacaagtcttttcagcgtgttttgtcctcactcgcatgcttaccgagaatcttcccggtaggtcacccatcccaaaattgc 7912043  T
Q  568 tccaagtcaa 577  Q
    ||||||||||    
T  7912042 tccaagtcaa 7912033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 464 - 590
Target Start/End: Complemental strand, 13493058 - 13492931
Alignment:
Q  464 tgctgactgacaacacaaaccaacacgagtcttttcagcgtgtttt-gtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaa 562  Q
    |||||||||||   ||||| ||||||||||||||||||| |||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  13493058 tgctgactgaccctacaaatcaacacgagtcttttcagcatgtttttgtcctcactcgcacgcttaccgggtaactttccggtaggtcacccatcccaaa 13492959  T
Q  563 attgctccaagtcaaatacgtttaactg 590  Q
    ||||||| |||||||  ||| |||||||    
T  13492958 attgctctaagtcaagcacgcttaactg 13492931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 13191395 - 13191517
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||| || |||||||||||||||||||| || |||||||||| ||||| ||||||||||| |||||||||    
T  13191395 gactgaccccacaaaccaacacgagtcttttcagtgtattttgtcctcactcgcacgcttatcgggaaacttcccggttggtcacccatctcaaaattgc 13191494  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  13191495 tccaagtcaagcacgcttaactg 13191517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 477 - 589
Target Start/End: Complemental strand, 7912565 - 7912453
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||| || |||||||||| || | ||||||||||| |||||||||||||||||||    
T  7912565 cacaaaccaacatgagtcttttcagcgtgttttgtcctcactcgtacgcttaacgggaaacttcccagcaggtcacccattccaaaattgctccaagtca 7912466  T
Q  577 aatacgtttaact 589  Q
    |  ||||||||||    
T  7912465 agcacgtttaact 7912453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 17731001 - 17731100
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||  |||||||||||||||||||| ||| |||||||||||||||||||    
T  17731001 acaaaccaacacgagtctttttagcgtgttttgtcctcacttgcacgcttaccgataaactttccggtaggtcacctatctcaaaattgctccaagtcaa 17731100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 468 - 587
Target Start/End: Complemental strand, 23776704 - 23776585
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||| |||||||||||||||||||| |||||||||||  |||  |||||||| || |||||||| |||||||||||||||    
T  23776704 gactgactccacaaaccaacacgaatcttttcagcgtgttttgtcgtcactcgcacgtttactaggaaacttcccagtaggtcatccatcccaaaattgc 23776605  T
Q  568 tccaagtcaaatacgtttaa 587  Q
    |||||||||| |||| ||||    
T  23776604 tccaagtcaagtacgcttaa 23776585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 477 - 573
Target Start/End: Original strand, 20896578 - 20896675
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttg-tcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaag 573  Q
    ||||||||||||||||||||||||| |||||||  ||||||||||||| | |||||||||| || |||||||||||||||||||||||||||||||||    
T  20896578 cacaaaccaacacgagtcttttcagtgtgtttttctcctcactcgcacacttaccgggaaatttcccggtaggtcacccatcccaaaattgctccaag 20896675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 23986199 - 23986308
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||| |||||||||||||||| || ||||||||||||||| | ||| ||||||| || | ||||||||||||||||||||||    
T  23986199 gactgaccccacaaaccaacacaagtcttttcagcgtgtcttctcctcactcgcacgctttccgtgaaacttcccagaaggtcacccatcccaaaattgc 23986298  T
Q  568 tccaagtcaa 577  Q
    ||||||||||    
T  23986299 tccaagtcaa 23986308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 477 - 590
Target Start/End: Complemental strand, 28780365 - 28780252
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||||||||||||||||||   |||||| ||||||||||||| | |||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  28780365 cacaaaccaacacgagtcttttcaaaatgttttatcctcactcgcacacttaccagaaaacttcccggtaggtcacccatcccaaaattgctccaagtca 28780266  T
Q  577 aatacgtttaactg 590  Q
    |  ||| |||||||    
T  28780265 agcacgcttaactg 28780252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 3652777 - 3652678
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||| ||||||||||||| | |||||||||||||||||||| ||||||||| ||| |||||||||||||||||| || | | |||||||||||    
T  3652777 acaaaccaacaagagtcttttcagctttttttgtcctcactcgcacgcttaccgggaagcttcccggtaggtcacccatccaaagactactccaagtcaa 3652678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 558
Target Start/End: Original strand, 2890731 - 2890811
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||  | |||||||||||||||    
T  2890731 acaaaccaacacgagtctttttagcgtgttttgtcctcactcgcacgcttatcgggaaacttctcagtaggtcacccatcc 2890811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 20126074 - 20126173
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||   |||||||| ||||| | || | | |||||||||||    
T  20126074 acaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcacgcttactgggaaacttctaggtaggtcgcccattcaaagactactccaagtcaa 20126173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 590
Target Start/End: Complemental strand, 17851172 - 17851060
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||||||||  | ||||||||||| ||||||||||||||  |||||||| || ||||||| ||||||| || | | |||||||||||    
T  17851172 acaaaccaacacgagtcttttcgacttgttttgtcctaactcgcacgcgtactaggaaacttcccagtaggtctcccatccgaagactactccaagtcaa 17851073  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  17851072 gcacgcttaactg 17851060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 478 - 557
Target Start/End: Complemental strand, 21311769 - 21311690
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatc 557  Q
    ||||||||||||||||| || |||||||||||||| |||||||||| | |||||| |||| | |||||||||||||||||    
T  21311769 acaaaccaacacgagtccttacagcgtgttttgtcttcactcgcacacttaccggaaaacatcccggtaggtcacccatc 21311690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 478 - 589
Target Start/End: Complemental strand, 21312225 - 21312114
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||| ||||||||||  |||||||||| |||||  ||| | ||||||||||||| |||||||||||| ||||  || | |||||||||||||    
T  21312225 acaaaccaacaccagtcttttcaatgtgttttgtcttcacttacacacttaccgggaaacttcccggtaggtcactcatcataagactgctccaagtcaa 21312126  T
Q  578 atacgtttaact 589  Q
      ||||||||||    
T  21312125 gcacgtttaact 21312114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 479 - 577
Target Start/End: Original strand, 2720456 - 2720554
Alignment:
Q  479 caaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||| || |||||||||| ||  || ||||||||||| || | | |||||||||||    
T  2720456 caaaccgacacgagtcttctcagcgtgttttgttctcactcgcacgcttatcgggaaacttcccaatatgtcacccatccaaagactactccaagtcaa 2720554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 478 - 532
Target Start/End: Original strand, 2891186 - 2891240
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgg 532  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  2891186 acaaaccaacacgaatcttttcagcgtgttttgtcctcactcgcacgcttaccgg 2891240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 468 - 572
Target Start/End: Original strand, 2681102 - 2681202
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||| ||| ||||||||||||||||| |||||| |||  |||||||| || |||    ||||||||||||||||     
T  2681102 gactgaccccacaaaccaacacgagtcttctcaacgtgttttgtcctcacttgcacgcttactaggaaacttcccagta----acccatcccaaaattgt 2681197  T
Q  568 tccaa 572  Q
    |||||    
T  2681198 tccaa 2681202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 3653152 - 3653057
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||| |||||||||||||||||||||||||    ||||||||| || ||||||||||  || |||||||||||||| || | | |||||||||||    
T  3653152 acaaaccaatacgagtcttttcagcgtgttttgtc----ctcgcacgcttatcgggaaacttctcgataggtcacccatccaaagactactccaagtcaa 3653057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 468 - 578
Target Start/End: Original strand, 9440739 - 9440849
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||| ||||||| |||||||||| ||||||| ||||| ||||   |  |||||||||| |  | ||||||||||||||||||||||    
T  9440739 gactgaccccacaaaccagcacgagttttttcagcgtattttgtcatcacttgcacatttttcgggaaacttccaagaaggtcacccatcccaaaattgc 9440838  T
Q  568 tccaagtcaaa 578  Q
    || ||||||||    
T  9440839 tcaaagtcaaa 9440849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 478 - 532
Target Start/End: Complemental strand, 11062083 - 11062029
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgg 532  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||    
T  11062083 acaaaccaacacgagtttttttagcgtgttttgtcctcactcgcacgcttaccgg 11062029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 468 - 520
Target Start/End: Complemental strand, 27334357 - 27334305
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 520  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||||    
T  27334357 gactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcg 27334305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 468 - 520
Target Start/End: Complemental strand, 27395097 - 27395045
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcg 520  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||||    
T  27395097 gactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcg 27395045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 495 - 590
Target Start/End: Complemental strand, 11062522 - 11062427
Alignment:
Q  495 ttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaatacgtttaactg 590  Q
    ||||||||||||||||||||||||| |  |  || |||||||||||||| |||||||||||||| || | | |||||||||||  ||| |||||||    
T  11062522 ttttcagcgtgttttgtcctcactcacgggtttatcgggaaactttccgataggtcacccatccaaagactactccaagtcaagcacgcttaactg 11062427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 530 - 590
Target Start/End: Complemental strand, 16520170 - 16520110
Alignment:
Q  530 cgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaatacgtttaactg 590  Q
    |||||||||| |||| |||||||||||| |||||||||||||||||||  ||| |||||||    
T  16520170 cgggaaacttcccggcaggtcacccatctcaaaattgctccaagtcaagcacgcttaactg 16520110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 477 - 524
Target Start/End: Original strand, 31415980 - 31416026
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacg 524  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  31415980 cacaaaccaacacga-tcttttcagcgtgttttgtcctcactcacacg 31416026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 558
Target Start/End: Original strand, 14771611 - 14771691
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    ||||||||||| ||||||| |||||||||||||||||| |||| |||  ||| || |||||| |  ||||||||| |||||    
T  14771611 acaaaccaacatgagtcttatcagcgtgttttgtcctcgctcgtacgtttactggtaaacttccgagtaggtcactcatcc 14771691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 542
Target Start/End: Complemental strand, 28583228 - 28583154
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttcc 542  Q
    |||||||  ||||||| |||| ||||||||||||  |||||||||| ||||| ||||| | | ||||||||||||    
T  28583228 gactgaccccacaaactaacatgagtcttttcagtatgttttgtccccactcacacgctttctgggaaactttcc 28583154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 590
Target Start/End: Complemental strand, 1991808 - 1991695
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    |||||| |||||||||| ||||||||||  |||||| |||||| || || |  ||| ||||||| | | ||||||||||||| |||| | |||||| |||    
T  1991808 cacaaatcaacacgagttttttcagcgtactttgtcttcactcacatgcttttcggaaaacttttcagaaggtcacccatccaaaaactactccaaatca 1991709  T
Q  577 aatacgtttaactg 590  Q
    |  | |||||||||    
T  1991708 ataatgtttaactg 1991695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 519
Target Start/End: Original strand, 3884984 - 3885025
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactc 519  Q
    |||||||||||| ||||||| || ||||||||||||||||||    
T  3884984 acaaaccaacacaagtctttacatcgtgttttgtcctcactc 3885025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 525
Target Start/End: Complemental strand, 15929394 - 15929346
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgc 525  Q
    |||||| |||||| |||||||| ||||| |||||||||||||| |||||    
T  15929394 cacaaatcaacacaagtctttttagcgtattttgtcctcactcacacgc 15929346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 502 - 558
Target Start/End: Original strand, 33774918 - 33774974
Alignment:
Q  502 cgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    |||||||| ||||||||||||||| |||||  ||||||  | |||||||||||||||    
T  33774918 cgtgttttttcctcactcgcacgcttaccgaaaaacttctcagtaggtcacccatcc 33774974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 4e-46; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 17445337 - 17445459
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  17445337 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 17445436  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  17445437 tccaagtcaagcacgcttaactg 17445459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 477 - 577
Target Start/End: Complemental strand, 189323 - 189223
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  189323 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 189224  T
Q  577 a 577  Q
    |    
T  189223 a 189223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 2474669 - 2474547
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||| |||||||||    
T  2474669 gactgaccccacaaaccaacacgagtcttttcagcgtgttttttcctcactcgcatgcttaccgggaaactttccggtaggtcacccatctcaaaattgc 2474570  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  2474569 tccaagtcaagcacgcttaactg 2474547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 3886483 - 3886605
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||| ||||||||    
T  3886483 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaaacttcccggtaggtcacccatccaaaaattgc 3886582  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    |||| |||||| ||| |||||||    
T  3886583 tccacgtcaaacacgcttaactg 3886605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 34371876 - 34371754
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  34371876 gactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaaaattgc 34371777  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  34371776 tccaagtcaagcacgcttaactg 34371754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 478 - 576
Target Start/End: Complemental strand, 22557224 - 22557125
Alignment:
Q  478 acaaaccaacacgagtctttt-cagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22557224 acaaaccaacacgagtcttttacagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtca 22557125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 468 - 587
Target Start/End: Original strand, 15512894 - 15513013
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  15512894 gactgaccccacaaaccaacacgagtcttttcaacgtattttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcatccatcccaaaattgc 15512993  T
Q  568 tccaagtcaaatacgtttaa 587  Q
    | ||||||||  ||||||||    
T  15512994 ttcaagtcaagcacgtttaa 15513013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 3886939 - 3887061
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||| ||||||||    
T  3886939 gactgaccccacaaaccaacacgagtcttgtcagcgtgttttgtcctcactcgcacgcttactgggaaacttcccagtaggtcacccatccaaaaattgc 3887038  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  3887039 tccaagtcaagcacgcttaactg 3887061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 42788528 - 42788650
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||| || ||||| ||||||| ||||||||||||| |||||||||||||    
T  42788528 gactgactccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcaagcttaccgagaaacttcccggtaggtcacctatcccaaaattgc 42788627  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  42788628 tccaagtcaagcacgcttaactg 42788650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 478 - 576
Target Start/End: Complemental strand, 22556791 - 22556692
Alignment:
Q  478 acaaaccaacacgagtctttt-cagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| | ||||||||||||||||||||||||||||||||||    
T  22556791 acaaaccaacacgagtcttttacagcgtgttttgtcctcactcgcacgcttaccgagaaacttcctggtaggtcacccatcccaaaattgctccaagtca 22556692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 8641917 - 8642038
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||||  ||||||||    
T  8641917 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgagaaac-ttcccgtaggtcacccatcttaaaattgc 8642015  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  8642016 tccaagtcaagcacgcttaactg 8642038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 8391204 - 8391313
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||| ||||||||||||| |||||||||||||||||||||||||||  || || ||||||| |||||||||||||||||||||||||||    
T  8391204 gactgaccccacaaatcaacacgagtcttctcagcgtgttttgtcctcactcgcacgtttatcgagaaacttcccggtaggtcacccatcccaaaattgc 8391303  T
Q  568 tccaagtcaa 577  Q
    ||||||||||    
T  8391304 tccaagtcaa 8391313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 480 - 590
Target Start/End: Complemental strand, 34372320 - 34372210
Alignment:
Q  480 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaat 579  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||| || ||| |||||| ||||||||||||| |||||||||||||||||||||||      
T  34372320 aaaccaacacgagtattttcagcgtgttttttcctcactcgcacgcttatcggaaaacttcccggtaggtcaccaatcccaaaattgctccaagtcaagc 34372221  T
Q  580 acgtttaactg 590  Q
    ||| |||||||    
T  34372220 acgcttaactg 34372210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 1822160 - 1822061
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||| |||||||||||||||||| || | | |||||||||||    
T  1822160 acaaaccaacacgagtcttttcagcgtgttttgtcctcattcacacgcttaccgggaaacttcccggtaggtcacccatccaaagactactccaagtcaa 1822061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 2474213 - 2474101
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||||||||||    
T  2474213 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggga----------taggtcacccatcccaaaattgc 2474124  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  2474123 tccaagtcaagcacgcttaactg 2474101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 10927295 - 10927407
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| |||||  |||||| ||||| |||||||||||| || | | |||||||||||    
T  10927295 acaaaccaacacgagtcttttcagcgtgttttgtcctcattcacacgcttaccgaaaaacttcccggtcggtcacccatccaaagactactccaagtcaa 10927394  T
Q  578 atacgtttaactg 590  Q
      |||||||||||    
T  10927395 gcacgtttaactg 10927407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 29679999 - 29680111
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| || ||||||||||  ||| ||||||||||||| || | | |||||||||||    
T  29679999 acaaaccaacacgagtcttttcagcgtgttttgtcctcatttgcacgcttatcgggaaacttctcggaaggtcacccatccaaagactactccaagtcaa 29680098  T
Q  578 atacgtttaactg 590  Q
    | ||| |||||||    
T  29680099 acacgcttaactg 29680111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 506 - 577
Target Start/End: Original strand, 21886066 - 21886137
Alignment:
Q  506 ttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  21886066 ttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaaaattgctccaagtcaa 21886137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 477 - 590
Target Start/End: Original strand, 24182137 - 24182250
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||| | | ||| ||||||||   | |||||||||||||||||||||||||||||||    
T  24182137 cacaaaccaacacgaatcttttcaacgtgttttatcctcactcgcacactttccgagaaactttttagaaggtcacccatcccaaaattgctccaagtca 24182236  T
Q  577 aatacgtttaactg 590  Q
    |  ||| |||||||    
T  24182237 accacgcttaactg 24182250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 558
Target Start/End: Original strand, 20039367 - 20039447
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||  ||||||||| ||||    
T  20039367 acaaaccaacatgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccaataggtcaccaatcc 20039447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 2194068 - 2193958
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||            |||| |||||||||||||||||||||||||||    
T  2194068 gactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcac------------acttaccggtaggtcacccatcccaaaattgc 2193981  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  2193980 tccaagtcaagcacgcttaactg 2193958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 468 - 556
Target Start/End: Original strand, 27646717 - 27646805
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccat 556  Q
    ||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||  ||  ||||||||| ||||||||||||||||    
T  27646717 gactgaccatacaaaccaacatgagtcttttcagcatgttttgtcctcactcgcacgtttattgggaaacttcccggtaggtcacccat 27646805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 480 - 539
Target Start/End: Complemental strand, 187810 - 187751
Alignment:
Q  480 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactt 539  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  187810 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaactt 187751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 477 - 590
Target Start/End: Original strand, 30720151 - 30720264
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||| |  ||| || |||||  | | |||| |||||||||||||| |||||||||    
T  30720151 cacaaaccaacaggagtcttttcagcgtgttttgtcctcgctcgcacgcttttcggaaagctttcaagaaagtcatccatcccaaaattgttccaagtca 30720250  T
Q  577 aatacgtttaactg 590  Q
    |  ||| |||||||    
T  30720251 agcacgattaactg 30720264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 467 - 587
Target Start/End: Original strand, 18750077 - 18750197
Alignment:
Q  467 tgactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattg 566  Q
    ||||||||  ||||||||||| ||||||||||||| ||||||||||||||||||||| | | |    |||||| |  | ||||||||||||| |||||||    
T  18750077 tgactgaccccacaaaccaactcgagtcttttcagtgtgttttgtcctcactcgcacactttctaaaaaacttcctagaaggtcacccatcctaaaattg 18750176  T
Q  567 ctccaagtcaaatacgtttaa 587  Q
    ||||||||||| |||| ||||    
T  18750177 ctccaagtcaagtacgattaa 18750197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 577
Target Start/End: Original strand, 30684902 - 30685002
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||| |  ||| ||||||||  | | |||| ||||| |||||||| |||||||||    
T  30684902 cacaaaccaacacgagtcttttcagcgtgttttgtcctcgcttgcacgcttttcggaaaactttcaagaaagtcatccatctcaaaattgttccaagtca 30685001  T
Q  577 a 577  Q
    |    
T  30685002 a 30685002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 478 - 530
Target Start/End: Complemental strand, 1880330 - 1880278
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtacc 530  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  1880330 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgctcgcttacc 1880278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 482 - 558
Target Start/End: Original strand, 38063725 - 38063800
Alignment:
Q  482 accaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    |||||||||||| |||||||||| ||||||||||| |||||||| |||||| |||||| || |||||||||||||||    
T  38063725 accaacacgagt-ttttcagcgtattttgtcctcattcgcacgcttaccggaaaacttcccagtaggtcacccatcc 38063800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 510 - 590
Target Start/End: Original strand, 10926870 - 10926950
Alignment:
Q  510 gtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaatacgtttaactg 590  Q
    |||||||||| ||||| |||| |||||||| |||||||||||||||||| || | | |||||||||||  |||||||||||    
T  10926870 gtcctcactcacacgcttaccaggaaacttcccggtaggtcacccatccaaagactactccaagtcaagcacgtttaactg 10926950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 479 - 590
Target Start/End: Original strand, 11757174 - 11757285
Alignment:
Q  479 caaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaa 578  Q
    |||||||||| ||||||||| ||||  ||| |||||||||| ||||| |||||  ||| || ||||||||||||||||| | ||||||||  |||||||     
T  11757174 caaaccaacaagagtcttttaagcggatttcgtcctcactcacacgcttaccgaaaaatttcccggtaggtcacccatctcgaaattgctgtaagtcaag 11757273  T
Q  579 tacgtttaactg 590  Q
     ||| |||||||    
T  11757274 cacgcttaactg 11757285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 20858434 - 20858532
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||| |||||||||| |||||||||||||||||||||||| ||| || |  | | |||||| || | |||||| |||||||||| ||||||||||||||    
T  20858434 acaaatcaacacgagtattttcagcgtgttttgtcctcactagcatgcttttcagaaaacttcccagaaggtca-ccatcccaaagttgctccaagtcaa 20858532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 578
Target Start/End: Complemental strand, 18304679 - 18304585
Alignment:
Q  484 caacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaa 578  Q
    |||||||||| | |||||||||||||||||||||||||||   | | | |||||||  |   |||||||||||| ||||||||||||||||||||    
T  18304679 caacacgagtttgttcagcgtgttttgtcctcactcgcacaatttctgtgaaacttctcaaaaggtcacccatcacaaaattgctccaagtcaaa 18304585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 493 - 578
Target Start/End: Original strand, 16370618 - 16370703
Alignment:
Q  493 tcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaa 578  Q
    ||||||||| ||||||| |||||| |||||||| |   | |||||||| | | | |||||||||||||||||||||||||||||||    
T  16370618 tcttttcagtgtgttttttcctcattcgcacgctttatgagaaacttttcagaatgtcacccatcccaaaattgctccaagtcaaa 16370703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 574
Target Start/End: Original strand, 30684447 - 30684544
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagt 574  Q
    |||||| ||| | ||||||||| ||  | ||||||||| |||||||||| |  || |||||||| | | |||||||||||||||||||||||||||||    
T  30684447 cacaaatcaatatgagtctttttagtatattttgtccttactcgcacgcttttcgagaaacttttcagaaggtcacccatcccaaaattgctccaagt 30684544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 478 - 558
Target Start/End: Complemental strand, 8366719 - 8366640
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    ||||||||||||||||||||||| ||||||||||| |||||| | ||| ||  || |||||| || |||||||||||||||    
T  8366719 acaaaccaacacgagtcttttcaacgtgttttgtcgtcactcac-cgcttattggaaaacttcccagtaggtcacccatcc 8366640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 511
Target Start/End: Original strand, 21883967 - 21884010
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgt 511  Q
    |||||||  |||||||||||||||||||||||||||||||||||    
T  21883967 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgt 21884010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 477 - 532
Target Start/End: Complemental strand, 34868033 - 34867978
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgg 532  Q
    |||||| ||||||||||||||| ||||||||||||||| ||| |||||| ||||||    
T  34868033 cacaaatcaacacgagtctttttagcgtgttttgtccttacttgcacgcttaccgg 34867978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 479 - 524
Target Start/End: Original strand, 5066781 - 5066826
Alignment:
Q  479 caaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacg 524  Q
    |||||||||| || |||||||||||||||||||| |||||||||||    
T  5066781 caaaccaacatgaatcttttcagcgtgttttgtcttcactcgcacg 5066826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 519
Target Start/End: Original strand, 21041410 - 21041460
Alignment:
Q  469 actgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 519  Q
    |||||| ||||| |||||| |||||||||||||| ||||||||||| ||||    
T  21041410 actgaccacacacaccaactcgagtcttttcagcatgttttgtcctaactc 21041460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 546 - 590
Target Start/End: Complemental strand, 4102982 - 4102938
Alignment:
Q  546 aggtcacccatcccaaaattgctccaagtcaaatacgtttaactg 590  Q
    ||||||| |||| |||||||||||||||||||  |||||||||||    
T  4102982 aggtcactcatctcaaaattgctccaagtcaagcacgtttaactg 4102938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 1e-45; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 477 - 590
Target Start/End: Complemental strand, 49998891 - 49998778
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  49998891 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtca 49998792  T
Q  577 aatacgtttaactg 590  Q
    || ||| |||||||    
T  49998791 aacacgcttaactg 49998778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 477 - 590
Target Start/End: Complemental strand, 35871882 - 35871769
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35871882 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccgggaaactttccgataggtcacccatcccaaaattgctccaagtca 35871783  T
Q  577 aatacgtttaactg 590  Q
    |  ||| |||||||    
T  35871782 agcacgcttaactg 35871769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 7678498 - 7678607
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  7678498 gactgaccccacaaacctacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgc 7678597  T
Q  568 tccaagtcaa 577  Q
    ||||||||||    
T  7678598 tccaagtcaa 7678607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 44470761 - 44470873
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  44470761 acaaaccaacacgagtctttccagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcaaccatcccaaaattgctccaagtcaa 44470860  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  44470861 gcacgcttaactg 44470873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 468 - 573
Target Start/End: Original strand, 4127294 - 4127399
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||| ||| |||||||||||||||||||    
T  4127294 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccgatagctcacccatcccaaaattgc 4127393  T
Q  568 tccaag 573  Q
    ||||||    
T  4127394 tccaag 4127399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 477 - 569
Target Start/End: Original strand, 4127774 - 4127866
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctc 569  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  4127774 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccggaaaacttttcggtaggtcacccatcccaaaattgctc 4127866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 23943128 - 23943240
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||| || | | |||||||||||    
T  23943128 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggttggtcacccatccaaagactactccaagtcaa 23943227  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  23943228 gcacgcttaactg 23943240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 24629312 - 24629431
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    || |||||||||||||||||||||||||||    
T  24629312 gactgaccccacaaactaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggg---tttcccggtaggtcacccatcccaaaattgc 24629408  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  24629409 tccaagtcaagcacgcttaactg 24629431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 477 - 589
Target Start/End: Complemental strand, 40607186 - 40607074
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    |||||| |||||||||| |||||||||| ||||||||||||||| |||| |||||  ||||||||||||||||||||||||||||| ||||||||| |||    
T  40607186 cacaaatcaacacgagttttttcagcgtattttgtcctcactcgaacgcttaccgataaactttccggtaggtcacccatcccaaatttgctccaaatca 40607087  T
Q  577 aatacgtttaact 589  Q
    || ||||||||||    
T  40607086 aacacgtttaact 40607074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 44471211 - 44471323
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||| |||| |||||||||||||||||| ||| |||||||||| || |||||||||||||||||||||||||||||||| ||||    
T  44471211 acaaaccaacacgagtctttccagcatgttttgtcctcactcgcccgcttaccgggaaatttcccggtaggtcacccatcccaaaattgctccaaatcaa 44471310  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  44471311 gcacgcttaactg 44471323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 23350159 - 23350268
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| | |||||||  |||||||||| |||||||||||||||    
T  23350159 gactgaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactcacacgcttacagagaaacttctcggtaggtcatccatcccaaaattgc 23350258  T
Q  568 tccaagtcaa 577  Q
    ||||||||||    
T  23350259 tccaagtcaa 23350268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 500 - 590
Target Start/End: Original strand, 12691907 - 12691997
Alignment:
Q  500 agcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaatacgtttaactg 590  Q
    |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||  ||| |||||||    
T  12691907 agcgtgttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactg 12691997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 497 - 590
Target Start/End: Original strand, 50814730 - 50814823
Alignment:
Q  497 ttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaatacgtttaactg 590  Q
    ||||||||||||||||||||||||||||  ||||||||||||| ||||||||||| |||||||||||||||||||||||||  ||| |||||||    
T  50814730 ttcagcgtgttttgtcctcactcgcacgtttaccgggaaacttcccggtaggtcatccatcccaaaattgctccaagtcaagcacgcttaactg 50814823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 21067536 - 21067437
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||||||||||| ||| || | | |||||||||||    
T  21067536 acaaactaacacgagtcttttcagtgtgttttgtccccactcgcacgcttaccgagaaactttccggtaggtcacccctccaaagactactccaagtcaa 21067437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 479 - 577
Target Start/End: Original strand, 14572041 - 14572139
Alignment:
Q  479 caaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||| | ||| ||||||| || | |||||||||||| ||||||||||| |||||||    
T  14572041 caaaccaacacgagtcttttcaccgtgttttgtcctcactcacacgctttccgagaaacttcccagaaggtcacccatctcaaaattgctctaagtcaa 14572139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 468 - 557
Target Start/End: Original strand, 15268049 - 15268138
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatc 557  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| || ||||||| |||||||||    
T  15268049 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgagaaatttcccggtagctcacccatc 15268138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 1645635 - 1645747
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||   ||||||| | |||||||||||||||| || | | |||||||||||    
T  1645635 acaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttacaaagaaacttcctggtaggtcacccatccaaagactactccaagtcaa 1645734  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  1645735 gcacgcttaactg 1645747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 482 - 558
Target Start/End: Original strand, 9423748 - 9423824
Alignment:
Q  482 accaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    ||||||||||||||||||||||||||||||||||||||||| || || ||||||| || ||||||||||||||||||    
T  9423748 accaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttaacgggaaatttcccggtaggtcacccatcc 9423824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 27578172 - 27578284
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||  | | ||||||||| ||   ||||||| |||||||||| |||||||||||||    
T  27578172 acaacccaacacgagtcttttcagcgtgttttgtcctcactcgcacgttttcagggaaacttcccataaggtcactcatcccaaaactgctccaagtcaa 27578271  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  27578272 gcacgcttaactg 27578284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 3169460 - 3169361
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||| ||||  ||||||||| |||||||||| ||||| || | | |||||||||||    
T  3169460 acaaaccaacacgagtattttcaacgtgttttgtcctcactcgcacgcttaccaagaaactttctggtaggtcactcatccaaagactactccaagtcaa 3169361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 50398424 - 50398523
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||| ||| || |||||||||||||||||||| |||||| |||||| |||||||||||||||||  || | | |||||||||||    
T  50398424 acaaaccaacacgagtctttccagtgtattttgtcctcactcgcacgcttaccggtaaacttcccggtaggtcacccatcataagaatactccaagtcaa 50398523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 550
Target Start/End: Complemental strand, 7381521 - 7381449
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtc 550  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||  |||||||||    
T  7381521 acaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaacttctcggtaggtc 7381449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 558
Target Start/End: Complemental strand, 21067985 - 21067905
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||  |||||| |||||| ||||||||||||||||||    
T  21067985 acaaaccaacacgaattttttcagtgtgttttgtcctcactcgcacgtttaccggtaaacttcccggtaggtcacccatcc 21067905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 23942675 - 23942787
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||| ||   |||||||||||||||||||| |||||| || | | |||||||||||    
T  23942675 acaaaccaacacgggtcctttcaacgtgttttgtcctcactcgcacgcttatttggaaactttccggtaggtcatccatccaaagactactccaagtcaa 23942774  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  23942775 gcacgcttaactg 23942787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 14571564 - 14571686
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||||||| ||| | | ||| ||||||| ||   || ||||||||| | |||||||    
T  14571564 gactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcacacactttccgagaaacttcccaaaagatcacccatctcgaaattgc 14571663  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  14571664 tccaagtcaagcacgcttaactg 14571686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 577
Target Start/End: Original strand, 27578342 - 27578442
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||| |  ||| |||||| || | ||||| | ||||||||||||| || ||||||    
T  27578342 cacaaaccatcacgagtcttttctgcgtgttttgtcctcactcgcacgcttgtcggaaaacttcccagaaggtcgctcatcccaaaattgttcgaagtca 27578441  T
Q  577 a 577  Q
    |    
T  27578442 a 27578442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 478 - 574
Target Start/End: Original strand, 27578795 - 27578891
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagt 574  Q
    ||||| |||||| |||||||||||| || ||||||||||||||||||| | | ||||||||| || | ||||||| ||||||||||| |||||||||    
T  27578795 acaaatcaacacaagtcttttcagcatgatttgtcctcactcgcacgctttctgggaaacttcccagaaggtcacgcatcccaaaatcgctccaagt 27578891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 464 - 590
Target Start/End: Complemental strand, 14352063 - 14351937
Alignment:
Q  464 tgctgactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaa 563  Q
    ||||||||||| | ||||||||||| ||||||||||||| | ||||||| ||||| |||||| ||| || ||||||| | |||||||| |||||| || |    
T  14352063 tgctgactgaccatacaaaccaacatgagtcttttcagcatattttgtcttcacttgcacgcttactggaaaactttgcagtaggtcatccatccaaaga 14351964  T
Q  564 ttgctccaagtcaaatacgtttaactg 590  Q
     | ||| |||||||| ||| |||||||    
T  14351963 ctactcgaagtcaaacacgcttaactg 14351937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 477 - 590
Target Start/End: Original strand, 8467698 - 8467806
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| || | ||| ||||||| ||   ||||||     ||||||||||||||||||||    
T  8467698 cacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgctttccgagaaacttcccataaggtca-----cccaaaattgctccaagtca 8467792  T
Q  577 aatacgtttaactg 590  Q
    |  ||| |||||||    
T  8467793 agcacgcttaactg 8467806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 468 - 537
Target Start/End: Complemental strand, 35477924 - 35477855
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaac 537  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||    
T  35477924 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctctctcgcacgtttaccgagaaac 35477855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 50398880 - 50398991
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||| || ||||||||||||||||| |||||  ||||||| || |  |||||||||||||||||  || | | |||||||||||    
T  50398880 acaaaccaacacgagtctttccaacgtgttttgtcctcacttgcacgtttaccggg-aattccccggtaggtcacccatcataagaatactccaagtcaa 50398978  T
Q  578 atacgtttaactg 590  Q
    | ||| |||||||    
T  50398979 acacgcttaactg 50398991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 537
Target Start/End: Original strand, 4414273 - 4414332
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaac 537  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| |||| ||||||    
T  4414273 acaaaccaacacgagtcttttcagtgtgttttgtcctgactcgcacgcttaccaggaaac 4414332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 563
Target Start/End: Original strand, 53854733 - 53854818
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaa 563  Q
    ||||| ||||||||||||||||| ||| ||||||| |||||||||||  |||||| |||||||  |||||||||| ||||| ||||    
T  53854733 acaaatcaacacgagtcttttcaacgtattttgtcatcactcgcacgtttaccggtaaactttttggtaggtcacacatccaaaaa 53854818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 468 - 576
Target Start/End: Complemental strand, 17628775 - 17628667
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||| |||||||| ||||||| ||| ||||||||||||||||| ||||| |   ||||| ||| |  | |||||||||||| |||||||||    
T  17628775 gactgactccacataccaacacaagtctttccagtgtgttttgtcctcactcacacgctttatgggaatcttcctagaaggtcacccatctcaaaattgc 17628676  T
Q  568 tccaagtca 576  Q
    |||||||||    
T  17628675 tccaagtca 17628667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 477 - 577
Target Start/End: Complemental strand, 27026757 - 27026657
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||| ||||||||||||||||||||||||| |||||| || ||||| |   || |||||| |  | ||||||||| ||||||||||||| |||||||    
T  27026757 cacaaacaaacacgagtcttttcagcgtgttttttcctcagtcacacgctttttggtaaacttcctagaaggtcacccttcccaaaattgcttcaagtca 27026658  T
Q  577 a 577  Q
    |    
T  27026657 a 27026657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 13266350 - 13266228
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||| |||||||||| | |||||| ||||||||||||| | |  ||| |||||| ||   ||||||||||||| |||||| |    
T  13266350 gactgaccccacaaaccaacacaagtcttttcaacatgttttctcctcactcgcacacttttcggaaaacttcccaaaaggtcacccatcctaaaatttc 13266251  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    || |||||||  ||| |||||||    
T  13266250 tcaaagtcaagcacgcttaactg 13266228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 574
Target Start/End: Complemental strand, 1464401 - 1464305
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagt 574  Q
    |||||| |||||||||| ||||||||||||| |||||| |||||||||  |   || ||||||  | | |||||||||||||||||||||||||||||    
T  1464401 cacaaatcaacacgagt-ttttcagcgtgttgtgtcctaactcgcacgttttttggaaaacttctcagaaggtcacccatcccaaaattgctccaagt 1464305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 26200205 - 26200278
Alignment:
Q  504 tgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||| ||||| |  || |||||||  | | ||||||||||||||||||||||||||||||||    
T  26200205 tgttttgtcctcactcacacgcttttcgtgaaacttcgctgaaggtcacccatcccaaaattgctccaagtcaa 26200278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 558
Target Start/End: Original strand, 31817023 - 31817104
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    ||||||||| |||||||||||||| | ||||||||||||||||| |||| | | ||||||||| || | | |||||||||||    
T  31817023 cacaaaccagcacgagtcttttcaacatgttttgtcctcactcgtacgctttctgggaaacttcccagaatgtcacccatcc 31817104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 542 - 590
Target Start/End: Original strand, 24628927 - 24628975
Alignment:
Q  542 cggtaggtcacccatcccaaaattgctccaagtcaaatacgtttaactg 590  Q
    ||||||||||||||||||||||||||||||||||||  ||| |||||||    
T  24628927 cggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactg 24628975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 539 - 590
Target Start/End: Original strand, 21220278 - 21220329
Alignment:
Q  539 ttccggtaggtcacccatcccaaaattgctccaagtcaaatacgtttaactg 590  Q
    |||| ||||||||||| ||||||||||||||||||||||| ||| |||||||    
T  21220278 ttccagtaggtcacccgtcccaaaattgctccaagtcaaacacgcttaactg 21220329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 477 - 523
Target Start/End: Original strand, 52048562 - 52048608
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcac 523  Q
    |||||||||||| || |||||||||||||||||||||||||| ||||    
T  52048562 cacaaaccaacatgaatcttttcagcgtgttttgtcctcacttgcac 52048608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 478 - 523
Target Start/End: Original strand, 33294778 - 33294823
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcac 523  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||    
T  33294778 acaacccaacacgagtcttttcagcgtgttttgttctcacttgcac 33294823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 478 - 515
Target Start/End: Original strand, 53996016 - 53996053
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctc 515  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  53996016 acaaaccaacacgagtcttttcaacgtgttttgtcctc 53996053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 525
Target Start/End: Complemental strand, 5810089 - 5810041
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgc 525  Q
    |||||| ||||| |||||||||||||||||||| ||||||||| |||||    
T  5810089 cacaaatcaacatgagtcttttcagcgtgttttatcctcactcacacgc 5810041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 478 - 516
Target Start/End: Original strand, 2499388 - 2499426
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctca 516  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  2499388 acaaaccaacacgcgtcttttcaacgtgttttgtcctca 2499426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 509
Target Start/End: Complemental strand, 13265900 - 13265859
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgtttt 509  Q
    |||||||  ||||||| |||||||||||||||||||||||||    
T  13265900 gactgaccgcacaaactaacacgagtcttttcagcgtgtttt 13265859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 480 - 520
Target Start/End: Original strand, 13613786 - 13613826
Alignment:
Q  480 aaaccaacacgagtcttttcagcgtgttttgtcctcactcg 520  Q
    ||||||||| |||||||| ||||||| ||||||||||||||    
T  13613786 aaaccaacatgagtctttacagcgtgctttgtcctcactcg 13613826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 51331169 - 51331279
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||| || |||||||||| ||| |||||||||||||| |||||||| || | | ||| || |||||||||||||||||  || | | |||||||||||    
T  51331169 acaaactaatacgagtcttt-cagtgtgttttgtcctcattcgcacgcttatc-gaaaatttcccggtaggtcacccatcataagaatactccaagtcaa 51331266  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  51331267 gcacgcttaactg 51331279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 91; Significance: 9e-44; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 1933 - 2055
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  1933 gactgaccccacaaaccaacacgagtcttttcagcgtattttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 2032  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  2033 tccaagtcaagcacgcttaactg 2055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 91; Significance: 9e-44; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 19230 - 19108
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  19230 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 19131  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  19130 tccaagtcaagcacgcttaactg 19108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 9e-44; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 2941639 - 2941761
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  2941639 gactgaccgcacaaaccaacacgagtcttttcagcgtgttttctcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 2941738  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  2941739 tccaagtcaagcacgcttaactg 2941761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 7646360 - 7646482
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||| |||||||||||||||||||||||||||    
T  7646360 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgagaaacttcccggtaggtcacccatcccaaaattgc 7646459  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  7646460 tccaagtcaagcacgcttaactg 7646482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 28496118 - 28495996
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||||||||||    
T  28496118 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccaataggtcacccatcccaaaattgc 28496019  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  28496018 tccaagtcaagcacgcttaactg 28495996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 34405473 - 34405595
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  34405473 gactgaccccacaaatcaacacgggtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 34405572  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  34405573 tccaagtcaagcacgcttaactg 34405595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 477 - 590
Target Start/End: Complemental strand, 7646670 - 7646557
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||    
T  7646670 cacaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcacgcttatcggaaaactttccggtaggtcacccatcccaaaattgctccaagtca 7646571  T
Q  577 aatacgtttaactg 590  Q
    |  ||| |||||||    
T  7646570 agcacgcttaactg 7646557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 477 - 590
Target Start/End: Complemental strand, 18833541 - 18833428
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  18833541 cacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccgggaaacttcccggtaggtcacccatcccaaaattgctcaaagtca 18833442  T
Q  577 aatacgtttaactg 590  Q
    || ||| |||||||    
T  18833441 aacacgcttaactg 18833428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 2193520 - 2193398
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  2193520 gactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 2193421  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||| ||||  ||| |||||||    
T  2193420 tccaaatcaagcacgcttaactg 2193398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 9125223 - 9125101
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||    
T  9125223 gactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccggaaaacttcccggtaggtcacccatcccaaaattgc 9125124  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||| ||||||  ||| |||||||    
T  9125123 tccgagtcaagcacgcttaactg 9125101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 477 - 590
Target Start/End: Original strand, 13122395 - 13122509
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgtttt-gtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtc 575  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  13122395 cacaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaaatc 13122494  T
Q  576 aaatacgtttaactg 590  Q
    ||  ||| |||||||    
T  13122495 aagcacgcttaactg 13122509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 36422515 - 36422394
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| |||||||    
T  36422515 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatccc-aaattgc 36422417  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  36422416 tccaagtcaagcacgcttaactg 36422394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 13125017 - 13125140
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgtttt-gtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattg 566  Q
    |||||||  |||||||||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  13125017 gactgaccccacaaaccaacacgagtcctttcagcgtgtttttgtcctcactcgcacgcttactgggaaacttcccggtaggtcacccatcccaaaattg 13125116  T
Q  567 ctccaagtcaaatacgtttaactg 590  Q
    |||||||||||  ||| |||||||    
T  13125117 ctccaagtcaagcacgcttaactg 13125140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 42515808 - 42515686
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| || |  ||||||||||||||||||||||||    
T  42515808 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaatttccatgtaggtcacccatcccaaaattgc 42515709  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  42515708 tccaagtcaagcacgcttaactg 42515686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 477 - 590
Target Start/End: Complemental strand, 2189399 - 2189286
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    |||||| ||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  2189399 cacaaatcaacacgagtcttctcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcactcatcccaaaattgctccaagtca 2189300  T
Q  577 aatacgtttaactg 590  Q
    |  ||| |||||||    
T  2189299 agcacgcttaactg 2189286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 478 - 590
Target Start/End: Complemental strand, 2466178 - 2466066
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| || |||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  2466178 acaaactaacacgagtcttttcagcgtgttttgtcctcacttgcatgcttaccgggaaatttcccggtaggtcacccatcccgaaattgctccaagtcaa 2466079  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  2466078 gcacgcttaactg 2466066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 464 - 577
Target Start/End: Original strand, 6718953 - 6719065
Alignment:
Q  464 tgctgactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaa 563  Q
    |||||||||||  ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| || ||| || |||||||||||| |||    
T  6718953 tgctgactgaccccacaaaccaacacgattcttttcagtgtgttttgtcctcactcgcacgcttaccgggaaagttcccgatatgtcacccatccc-aaa 6719051  T
Q  564 ttgctccaagtcaa 577  Q
    || |||||||||||    
T  6719052 ttactccaagtcaa 6719065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 477 - 590
Target Start/End: Original strand, 43776181 - 43776294
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| ||| || |||||| || | ||||||||||| |||||||||||||||||||    
T  43776181 cacaaaccaacacgagtcttttcagcgtgttttgtcttcattcgcacgcttactggaaaacttccccgcaggtcacccattccaaaattgctccaagtca 43776280  T
Q  577 aatacgtttaactg 590  Q
    |  ||| |||||||    
T  43776281 agcacgcttaactg 43776294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 29038912 - 29039011
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||| ||||||||||| |||||| || | | |||||||||||    
T  29038912 acaaaccaacacgagtcttttcagcgtgttttgtcctcagtcacacgcttaccgggaaacttaccggtaggtcatccatccaaagactactccaagtcaa 29039011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 478 - 558
Target Start/End: Original strand, 3305240 - 3305320
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||||||||||||||||    
T  3305240 acaaatcaacacgagtcttttcagcgtgttttgttctcactcgcactcttaccaggaaactttccggtaggtcacccatcc 3305320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 468 - 552
Target Start/End: Complemental strand, 43233221 - 43233137
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcac 552  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||  |||||||||||    
T  43233221 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaacttctcggtaggtcac 43233137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 22529127 - 22529239
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||| |||||||  | ||||||||||||||| || | | |||||||||||    
T  22529127 acaaaccaacatgagtcttttcagcgtattttgtcctcactcacacgcttaccgagaaacttctcagtaggtcacccatccaaagactactccaagtcaa 22529226  T
Q  578 atacgtttaactg 590  Q
    | ||| |||||||    
T  22529227 acacgcttaactg 22529239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 35474013 - 35474125
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||| |||| |||||||||||||||||||||||||||| | ||||| |||| || |||||| ||||||||||| || | | |||||||||||    
T  35474013 acaaaccaacacaagtcatttcagcgtgttttgtcctcactcgcacacttaccgagaaaattcccggtacgtcacccatccaaagactactccaagtcaa 35474112  T
Q  578 atacgtttaactg 590  Q
    | ||| |||||||    
T  35474113 acacgcttaactg 35474125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 28495501 - 28495612
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||            || |||||||||||||||||||||||||||    
T  28495501 gactgaccccacaaaccaacacgagtcttttcagcgggttttgtcctcactcgcacgc-----------tttcccggtaggtcacccatcccaaaattgc 28495589  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  28495590 tccaagtcaagcacgcttaactg 28495612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 590
Target Start/End: Complemental strand, 42515346 - 42515234
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||  ||| || | |||| ||||||||||| || | | |||||||||||    
T  42515346 acaaaccaacacgagtcttttcagcgtgttttgtcctcacccgcacgcttaccgaaaaagttcctggtatgtcacccatccaaagactactccaagtcaa 42515247  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  42515246 gcacgcttaactg 42515234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 512 - 590
Target Start/End: Complemental strand, 2465953 - 2465875
Alignment:
Q  512 cctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaatacgtttaactg 590  Q
    ||||||||||| || |||||||||| || |||||||||||||||||||||||||||||||||||||  ||| |||||||    
T  2465953 cctcactcgcatgcttaccgggaaatttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactg 2465875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 478 - 590
Target Start/End: Complemental strand, 680071 - 679958
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgtttt-gtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||||| |||||||||||||||||||| || |||||||||| |  ||||| ||||||| |||| ||||||||||||| || | | ||||||||||    
T  680071 acaaaccaacatgagtcttttcagcgtgtttttgttctcactcgcatgtttaccgcgaaacttcccggcaggtcacccatccaaagactactccaagtca 679972  T
Q  577 aatacgtttaactg 590  Q
    |  ||| |||||||    
T  679971 agcacgcttaactg 679958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 478 - 523
Target Start/End: Original strand, 6747968 - 6748013
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcac 523  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6747968 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcac 6748013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 525
Target Start/End: Original strand, 2611551 - 2611598
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgc 525  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  2611551 acaaaccaacacgagtcttttcagagtgttttgtcctcactcgcacgc 2611598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 468 - 539
Target Start/End: Complemental strand, 36422646 - 36422575
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactt 539  Q
    |||||||  |||||| |||||||||||||||||| ||||||||||||||||||||| | | |||||||||||    
T  36422646 gactgaccccacaaatcaacacgagtcttttcagtgtgttttgtcctcactcgcacacttgccgggaaactt 36422575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 477 - 590
Target Start/End: Original strand, 5406478 - 5406592
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacg-cgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtc 575  Q
    |||| |||||||||||| ||||||| ||||||||||||||||||||||   |  ||| ||||||||| | | |||| ||||||||||||||||| |||||    
T  5406478 cacagaccaacacgagtgttttcagtgtgttttgtcctcactcgcacgttttttcggaaaactttccagaaagtcatccatcccaaaattgctcaaagtc 5406577  T
Q  576 aaatacgtttaactg 590  Q
    ||  ||| |||||||    
T  5406578 aagcacgcttaactg 5406592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 478 - 518
Target Start/End: Complemental strand, 11372697 - 11372657
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcact 518  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  11372697 acaaaccaacacgagtcttttcagcatgttttgtcctcact 11372657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 29357348 - 29357460
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||| |  || | ||||| |||| |||||| |||||  || | | ||| |||||||    
T  29357348 acaaaccaacacgagtcttttcaacgtgctttgttctcactcgcacgcttttcgaggaacttaccggaaggtcatccatcttaagactactctaagtcaa 29357447  T
Q  578 atacgtttaactg 590  Q
    | ||| |||||||    
T  29357448 acacggttaactg 29357460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 519
Target Start/End: Original strand, 26419117 - 26419168
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 519  Q
    |||||||  |||||||||||||||||||||||| | ||||||||||||||||    
T  26419117 gactgaccccacaaaccaacacgagtcttttcaacatgttttgtcctcactc 26419168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 477 - 523
Target Start/End: Original strand, 7461273 - 7461319
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcac 523  Q
    |||||| |||||||||||||||||||||||||| || ||||||||||    
T  7461273 cacaaatcaacacgagtcttttcagcgtgttttatcttcactcgcac 7461319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 478 - 524
Target Start/End: Original strand, 31743781 - 31743827
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacg 524  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||    
T  31743781 acaaaccaacacgagtcttttcagcgtgcgttgacctcactcgcacg 31743827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 522
Target Start/End: Original strand, 6747498 - 6747542
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgca 522  Q
    |||||||||||| |||||||||| | |||||||||||||||||||    
T  6747498 acaaaccaacacaagtcttttcaacttgttttgtcctcactcgca 6747542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 546 - 581
Target Start/End: Complemental strand, 1628899 - 1628864
Alignment:
Q  546 aggtcacccatcccaaaattgctccaagtcaaatac 581  Q
    |||||||||||||||||||||||||||| |||||||    
T  1628899 aggtcacccatcccaaaattgctccaagccaaatac 1628864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 525
Target Start/End: Original strand, 31406481 - 31406528
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgc 525  Q
    ||||||||||||  ||||||||||| |||||||||||||||| |||||    
T  31406481 acaaaccaacacatgtcttttcagcatgttttgtcctcactcacacgc 31406528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 478 - 524
Target Start/End: Original strand, 36015361 - 36015407
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacg 524  Q
    |||||| |||||||||||||| ||||| |||||||||||||| ||||    
T  36015361 acaaactaacacgagtctttttagcgtattttgtcctcactcacacg 36015407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 480 - 520
Target Start/End: Complemental strand, 9623459 - 9623419
Alignment:
Q  480 aaaccaacacgagtcttttcagcgtgttttgtcctcactcg 520  Q
    ||||||||| |||||||| ||||||| ||||||||||||||    
T  9623459 aaaccaacatgagtctttacagcgtgctttgtcctcactcg 9623419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 9e-44; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 25337879 - 25338001
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  25337879 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgc 25337978  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  25337979 tccaagtcaagcacgcttaactg 25338001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 32377789 - 32377911
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| || |||| |||||||||||||||||||    
T  32377789 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaacttcccagtagatcacccatcccaaaattgc 32377888  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||| ||| |||||||    
T  32377889 tccaagtcaaacacgcttaactg 32377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 32377598 - 32377707
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  32377598 gactgaccccacaaaccaacacgagttttttcagcgtgttttgtcctcactcgcacgcttaccggaaaactttccggtaggtcacctatcccaaaattgc 32377697  T
Q  568 tccaagtcaa 577  Q
    ||||||||||    
T  32377698 tccaagtcaa 32377707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 477 - 577
Target Start/End: Complemental strand, 33771256 - 33771156
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33771256 cacaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcatgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtca 33771157  T
Q  577 a 577  Q
    |    
T  33771156 a 33771156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 24818589 - 24818468
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||| ||||||||||    
T  24818589 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccaggaaacttcccggtaggtcacccat-ccaaaattgc 24818491  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  24818490 tccaagtcaagcacgcttaactg 24818468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 574
Target Start/End: Complemental strand, 30966954 - 30966848
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  30966954 gactgactccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgagaaacttcccggtaggtcacccatcccaaaattgc 30966855  T
Q  568 tccaagt 574  Q
    |||||||    
T  30966854 tccaagt 30966848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 477 - 577
Target Start/End: Original strand, 29259511 - 29259611
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  29259511 cacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctcaaagtca 29259610  T
Q  577 a 577  Q
    |    
T  29259611 a 29259611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 468 - 577
Target Start/End: Complemental strand, 30966498 - 30966389
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||| ||||||||||||||||||||| || ||||| ||||||| ||||||||||||||||||||||||||     
T  30966498 gactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgcttaccgagaaacttcccggtaggtcacccatcccaaaattgg 30966399  T
Q  568 tccaagtcaa 577  Q
    ||||||||||    
T  30966398 tccaagtcaa 30966389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 478 - 590
Target Start/End: Complemental strand, 16379647 - 16379535
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| |||||||||||||||||| || ||| |||||||||||    
T  16379647 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacagtgaaacttcccggtaggtcacccatccaaagattactccaagtcaa 16379548  T
Q  578 atacgtttaactg 590  Q
    | ||| |||||||    
T  16379547 acacgcttaactg 16379535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 5399699 - 5399808
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||| ||||||| ||||||||||||| ||||||||||||| |||||| |||||| | ||||||||||||||||||||||| |    
T  5399699 gactgaccccacaaaccaacacaagtctttccagcgtgttttgttctcactcgcacgcttaccggaaaacttcctggtaggtcacccatcccaaaatttc 5399798  T
Q  568 tccaagtcaa 577  Q
    ||||||||||    
T  5399799 tccaagtcaa 5399808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 478 - 590
Target Start/End: Complemental strand, 16379191 - 16379079
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||| |||||||||||||| || | | |||||||||||    
T  16379191 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacccggaaacttcccgataggtcacccatccaaagactactccaagtcaa 16379092  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  16379091 gcacgcttaactg 16379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 500 - 590
Target Start/End: Complemental strand, 41754521 - 41754431
Alignment:
Q  500 agcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaatacgtttaactg 590  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||  ||| |||||||    
T  41754521 agcgtgttttgtcctcactcgcacgtttaccgggaaactttccggtaggtcatccatcccaaaattgctccaagtcaagcacgcttaactg 41754431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 478 - 590
Target Start/End: Complemental strand, 1912778 - 1912666
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||| ||||||||| |||||||| || | | |||||||||||    
T  1912778 acaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgagaaacttcccggtaggtaacccatccaaagagtactccaagtcaa 1912679  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  1912678 tcacgcttaactg 1912666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 482 - 590
Target Start/End: Complemental strand, 8256776 - 8256668
Alignment:
Q  482 accaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaatac 581  Q
    ||||||| ||||||||||||||| |||||||||||||||||||| || ||| |||||| || | ||||||||||||||||||||||||||||||||  ||    
T  8256776 accaacatgagtcttttcagcgtattttgtcctcactcgcacgcttatcggaaaacttcccagcaggtcacccatcccaaaattgctccaagtcaagcac 8256677  T
Q  582 gtttaactg 590  Q
    | |||||||    
T  8256676 gcttaactg 8256668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 481 - 558
Target Start/End: Complemental strand, 15620149 - 15620072
Alignment:
Q  481 aaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| || |||||||||||||||    
T  15620149 aaccaacacgagtcttttcagcgagttttgtcctcactcgcacgcttaccgagaaacttcccagtaggtcacccatcc 15620072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 477 - 590
Target Start/End: Original strand, 30963154 - 30963267
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||||||| | ||| ||||||| |  | ||||||| |||||||||||||||||||||||    
T  30963154 cacaaaccaacacgagtcttttcaacgtattttatcctcactcgcacgctttccgagaaacttccaagaaggtcactcatcccaaaattgctccaagtca 30963253  T
Q  577 aatacgtttaactg 590  Q
    |  ||| |||||||    
T  30963254 agcacgcttaactg 30963267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 481 - 577
Target Start/End: Complemental strand, 15639985 - 15639889
Alignment:
Q  481 aaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| || || ||||||| || ||||||||||||||| || | | |||||||||||    
T  15639985 aaccaacacgagtcttttctgcgtgttttgtcctcactcgcacgcttatcgagaaacttcccagtaggtcacccatccaaagactactccaagtcaa 15639889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 477 - 590
Target Start/End: Original strand, 30961774 - 30961887
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||| ||||| ||||||||||  ||||||||||||||||||||||| | | | ||||||  || | |||||||||||||||||||||||| ||||||    
T  30961774 cacaaactaacacaagtcttttcactgtgttttgtcctcactcgcacgctttctgagaaactacccagaaggtcacccatcccaaaattgctctaagtca 30961873  T
Q  577 aatacgtttaactg 590  Q
    |  |||||||||||    
T  30961874 agcacgtttaactg 30961887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 479 - 558
Target Start/End: Original strand, 8181254 - 8181333
Alignment:
Q  479 caaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    |||||||||||||||||||||||||||||||||||||||| |||||  || ||| |||||| || |||||||||||||||    
T  8181254 caaaccaacacgagtcttttcagcgtgttttgtcctcacttgcacgtttatcggaaaacttcccagtaggtcacccatcc 8181333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 478 - 557
Target Start/End: Complemental strand, 33175210 - 33175132
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatc 557  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||| || || |||||||||||||||||    
T  33175210 acaaactaacacgagtctttccagcgtgttttgtcctcactcgcacgcttaccggg-aatttcccggtaggtcacccatc 33175132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 478 - 558
Target Start/End: Original strand, 25433948 - 25434028
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    |||||||||||||| |||||||||||||||||||||| |||| ||||| |||| | |||||| || || ||||||||||||    
T  25433948 acaaaccaacacgaatcttttcagcgtgttttgtccttactcacacgcttaccagaaaacttccctgttggtcacccatcc 25434028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 525
Target Start/End: Original strand, 36924373 - 36924420
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgc 525  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  36924373 acaaaccaacacgagtctttccagcgtgttttgtcctcactcgcacgc 36924420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 484 - 558
Target Start/End: Complemental strand, 1707289 - 1707215
Alignment:
Q  484 caacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    |||| ||| |||||| ||||||||||||  |||||||||||| ||||||||||||| | ||||||||||||||||    
T  1707289 caacgcgaatctttttagcgtgttttgtattcactcgcacgcttaccgggaaacttcctggtaggtcacccatcc 1707215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 478 - 524
Target Start/End: Complemental strand, 20502218 - 20502172
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacg 524  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  20502218 acaaactaacacgagtcttttcagcgtgttttgtcctcactcgcacg 20502172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 477 - 569
Target Start/End: Original strand, 18875876 - 18875968
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctc 569  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||||  |  |  |||||||| | | || |||||||||||||||||||||    
T  18875876 cacaaaccaacacgtgtctttacagtgtgttttgtcctcactcgcacgattttcaagaaacttttcagaagatcacccatcccaaaattgctc 18875968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 478 - 587
Target Start/End: Original strand, 27882818 - 27882927
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||| || |||||||||||||||||||||| ||| |||| | |||||  ||||||  | |||||||||| |||| || | | |||||||||||    
T  27882818 acaaaccaacaagattcttttcagcgtgttttgtcctgacttgcacacttaccgaaaaacttctcagtaggtcacctatccaaagactactccaagtcaa 27882917  T
Q  578 atacgtttaa 587  Q
    | ||| ||||    
T  27882918 acacgcttaa 27882927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 590
Target Start/End: Original strand, 30963611 - 30963724
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||  | |||  |||||| |  | |||||||| ||||||||| | | ||||||||    
T  30963611 cacaaaccaaaacgagtcttttcactgtgttttgtcctcactcgcacggtttccgacaaacttcctagaaggtcacctatcccaaaactccgccaagtca 30963710  T
Q  577 aatacgtttaactg 590  Q
    |  ||| |||||||    
T  30963711 agcacgcttaactg 30963724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 544 - 590
Target Start/End: Complemental strand, 11388375 - 11388329
Alignment:
Q  544 gtaggtcacccatcccaaaattgctccaagtcaaatacgtttaactg 590  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||    
T  11388375 gtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactg 11388329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 544 - 590
Target Start/End: Complemental strand, 11394721 - 11394675
Alignment:
Q  544 gtaggtcacccatcccaaaattgctccaagtcaaatacgtttaactg 590  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||    
T  11394721 gtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactg 11394675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 480 - 577
Target Start/End: Complemental strand, 13191226 - 13191129
Alignment:
Q  480 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||| |||||||| |||||||||||||| || || ||||| |   | |||||||||| | |||||||| ||| ||||||| || ||||||||    
T  13191226 aaaccaacactagtctttttagcgtgttttgtccgcattcacacgctttttgagaaactttccagaaggtcacctatctcaaaatttcttcaagtcaa 13191129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 508
Target Start/End: Complemental strand, 29804902 - 29804871
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttt 508  Q
    ||||||||||||||||||||||||||||||||    
T  29804902 cacaaaccaacacgagtcttttcagcgtgttt 29804871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 517
Target Start/End: Original strand, 38898817 - 38898856
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcac 517  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  38898817 acaaaccaacttgagtcttttcagcgtgttttgtcctcac 38898856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 523
Target Start/End: Complemental strand, 83272 - 83226
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcac 523  Q
    ||||||||||||  |||||| ||| ||||||||||||||||||||||    
T  83272 cacaaaccaacataagtcttatcaacgtgttttgtcctcactcgcac 83226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 538
Target Start/End: Complemental strand, 11389747 - 11389677
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaact 538  Q
    |||||||  |||||||||||| |||| |||||||| |||||| | |||||||||| || |||| |||||||    
T  11389747 gactgaccccacaaaccaacatgagttttttcagcatgttttattctcactcgcatgcttaccaggaaact 11389677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 468 - 538
Target Start/End: Complemental strand, 11406408 - 11406338
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaact 538  Q
    |||||||  |||||||||||| |||| |||||||| |||||| | |||||||||| || |||| |||||||    
T  11406408 gactgaccccacaaaccaacatgagttttttcagcatgttttattctcactcgcatgcttaccaggaaact 11406338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 522
Target Start/End: Original strand, 26865144 - 26865189
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgca 522  Q
    ||||||||||||||  |||||||||| || ||||||||||||||||    
T  26865144 cacaaaccaacacggatcttttcagcatgctttgtcctcactcgca 26865189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 477 - 565
Target Start/End: Complemental strand, 8074147 - 8074059
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaatt 565  Q
    ||||||| ||||| ||| |||||| |||||||||| |||| || ||| | |  || ||||||||| || ||||||| ||||||||||||    
T  8074147 cacaaacaaacacaagttttttcatcgtgttttgttctcaatcacacacttttcgagaaactttctggaaggtcactcatcccaaaatt 8074059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 3e-43; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 468 - 577
Target Start/End: Complemental strand, 39653428 - 39653319
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  39653428 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgc 39653329  T
Q  568 tccaagtcaa 577  Q
    ||||||||||    
T  39653328 tccaagtcaa 39653319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 477 - 577
Target Start/End: Complemental strand, 8067535 - 8067435
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||    
T  8067535 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttatcgggaaacttcccggtaggtcacccatcccaaaattgctccaagtca 8067436  T
Q  577 a 577  Q
    |    
T  8067435 a 8067435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 13150436 - 13150558
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  13150436 gactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgc 13150535  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  13150536 tccaagtcaagcacgcttaactg 13150558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 11179916 - 11180038
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| | |||||||||||||||||||||||||||    
T  11179916 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacacttaccgggaaacatcccggtaggtcacccatcccaaaattgc 11180015  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  11180016 tccaagtcaagcacgcttaactg 11180038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 14820418 - 14820296
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||| ||||||||||||||||||||||     
T  14820418 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcacttgcatgcttaccgggaaactttccgataggtcacccatcccaaaattgt 14820319  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  14820318 tccaagtcaagcacgcttaactg 14820296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 28562009 - 28561888
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||| |||||||||||||||    
T  28562009 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttccccgtaggtca-ccatcccaaaattgc 28561911  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  28561910 tccaagtcaagcacgcttaactg 28561888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 50348010 - 50347888
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||  ||||||||||||||||||||||||||    
T  50348010 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttatcgggaaacttctcggtaggtcacccatcccaaaattgc 50347911  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  50347910 tccaagtcaagcacgcttaactg 50347888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 477 - 590
Target Start/End: Complemental strand, 14814204 - 14814091
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  14814204 cacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacgcttaccgggaaacctttcggtaggtcacccatcacaaaattgctccaagtca 14814105  T
Q  577 aatacgtttaactg 590  Q
    |  ||| |||||||    
T  14814104 agcacgcttaactg 14814091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 27187211 - 27187334
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgtttt-gtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattg 566  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  27187211 gactgaccccacaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacgcttatcgggaaacttcccggtaggtcacccatcccaaaattg 27187310  T
Q  567 ctccaagtcaaatacgtttaactg 590  Q
    ||| |||||||  ||| |||||||    
T  27187311 ctcaaagtcaagcacgcttaactg 27187334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 13149981 - 13150103
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| |||| | ||||| ||||||| |||||||||||||||| ||||||||||    
T  13149981 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcacttgcacacttaccgagaaacttcccggtaggtcacccattccaaaattgc 13150080  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  13150081 tccaagtcaagcacgcttaactg 13150103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 32227103 - 32227225
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||  ||||||| ||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  32227103 gactgaccccacaaaccaacacgagtcttttcaatgtgttttttcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgc 32227202  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  32227203 tccaagtcaagcacgcttaactg 32227225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 32386616 - 32386738
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||| ||||||||||||||||||||| |||| ||||  ||||||||||||| |||||||||||||||||||||    
T  32386616 gactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcggacgcttaccaagaaactttccggtgggtcacccatcccaaaattgc 32386715  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  32386716 tccaagtcaagcacgcttaactg 32386738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 477 - 577
Target Start/End: Complemental strand, 16811180 - 16811080
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  16811180 cacaaaccaacacgaatcttttcagcgtattttgtcctcactcgcacgcttacggggaaacttcccggtaggtcacccatcccaaaattgctacaagtca 16811081  T
Q  577 a 577  Q
    |    
T  16811080 a 16811080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 16811643 - 16811523
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||  |||||||||||||||| || || |||||||||| |||||||||||||||||||||||||||    
T  16811643 gactgaccccacaaaccaacacgagtcttttcagcgt--tttgtcctcactcgcatgcttatcgggaaacttcccggtaggtcacccatcccaaaattgc 16811546  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  16811545 tccaagtcaagcacgcttaactg 16811523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 478 - 590
Target Start/End: Complemental strand, 32227754 - 32227642
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||| | || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  32227754 acaaaccaacacgagtcttttcaatgtgttttttcctcactcgcacacttatcgggaaacttcccggtaggtcacccatcccaaaattgctccaagtcaa 32227655  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  32227654 gcacgcttaactg 32227642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 31284158 - 31284280
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||| |  ||| |||||| |||| ||||||||||||||||||||||    
T  31284158 gactgaccccacaaaccaacacgagtcttttcggcgtgttttgtccccactcgcacgcttgtcggaaaacttcccggcaggtcacccatcccaaaattgc 31284257  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  31284258 tccaagtcaagcacgcttaactg 31284280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 20885009 - 20885108
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||| || ||||||| || |||||||||||||||||| || | | |||||||||||    
T  20885009 acaaaccaacacgagtcttttcagcgtgttttgtcctaacttgcacgcttaacgggaaatttcccggtaggtcacccatccaaatactactccaagtcaa 20885108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 4067252 - 4067364
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||||| |||| | |||||||||||||||||| |||||| || | | |||||||||||    
T  4067252 acaaaccaacactggtcttttcagcgtgttttgtcctcacttgcacgcttaccagaaaactttccggtaggtcatccatccaaagactactccaagtcaa 4067351  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  4067352 gcacgcttaactg 4067364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 478 - 590
Target Start/End: Complemental strand, 37045286 - 37045177
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || || ||||||   | |||||||||||||||||| || | | |||||||||||    
T  37045286 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttatcgggaa---tcccggtaggtcacccatccaaagactactccaagtcaa 37045190  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  37045189 gcacgcttaactg 37045177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 25238576 - 25238688
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||   |||||| ||| ||||||||| |||| || | | |||||||||||    
T  25238576 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttaccaaaaaacttcccgataggtcaccaatccaaagactactccaagtcaa 25238675  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  25238676 gcacgcttaactg 25238688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 25230597 - 25230696
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||||| || ||||| ||||||||  || | | |||||||||||    
T  25230597 acaaaccaacacgagtctttccagcgtgttttgatctcactcgcacgcttaccgggaaacttcccagtagggcacccatcataagactactccaagtcaa 25230696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 25238184 - 25238283
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||||| || ||||| ||||||||  || | | |||||||||||    
T  25238184 acaaaccaacacgagtctttccagcgtgttttgatctcactcgcacgcttaccgggaaacttcccagtagggcacccatcataagactactccaagtcaa 25238283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 479 - 577
Target Start/End: Complemental strand, 30529939 - 30529842
Alignment:
Q  479 caaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| || ||| ||||||| |||| ||||||||||||||| || | | |||||||||||    
T  30529939 caaaccaacacaagtctttttagcgtgttttgtcctcactcgcatgcttactgggaaac-ttccagtaggtcacccatccaaagactactccaagtcaa 30529842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 464 - 577
Target Start/End: Complemental strand, 3900068 - 3899955
Alignment:
Q  464 tgctgactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaa 563  Q
    |||||||||||  |||| | ||||||||||||||||| | ||||||||||  |||| ||||| |   |||||||||||| | ||||||||||| ||||||    
T  3900068 tgctgactgaccccacagatcaacacgagtcttttcaccttgttttgtccatactcacacgctttttgggaaactttccagaaggtcacccataccaaaa 3899969  T
Q  564 ttgctccaagtcaa 577  Q
    ||||||||||||||    
T  3899968 ttgctccaagtcaa 3899955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 477 - 577
Target Start/End: Complemental strand, 25248367 - 25248266
Alignment:
Q  477 cacaaaccaacacgagtctttt-cagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtc 575  Q
    |||||| ||||||||||||||| || |||||||||||||||||||||||| ||||| ||||||| ||||||||||| |||||  || | | |||||||||    
T  25248367 cacaaatcaacacgagtctttttcaacgtgttttgtcctcactcgcacgcttaccgtgaaacttcccggtaggtcatccatcataagactactccaagtc 25248268  T
Q  576 aa 577  Q
    ||    
T  25248267 aa 25248266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 478 - 531
Target Start/End: Complemental strand, 2911338 - 2911285
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccg 531  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  2911338 acaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccg 2911285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 41473805 - 41473748
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgc 525  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41473805 gactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgc 41473748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 480 - 577
Target Start/End: Complemental strand, 41474249 - 41474152
Alignment:
Q  480 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||| |||| ||||||||||| | ||||||||  |||| ||||||  ||| ||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  41474249 aaactaacatgagtcttttcaacatgttttgtattcacccgcacgattactgggaaactttctggtatgtcacccatcccaaaattgttccaagtcaa 41474152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 25230140 - 25230239
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||| ||||||| || |||||||||||||||||||| ||| |||||| |||||| | | |||||||||||||  || | | |||||||||||    
T  25230140 acaaaccaacactagtctttccaacgtgttttgtcctcactcgctcgcttaccggaaaacttcctgataggtcacccatcataagactactccaagtcaa 25230239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 25237727 - 25237826
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||| ||||||| || |||||||||||||||||||| ||| |||||| |||||| | | |||||||||||||  || | | |||||||||||    
T  25237727 acaaaccaacactagtctttccaacgtgttttgtcctcactcgctcgcttaccggaaaacttcctgataggtcacccatcataagactactccaagtcaa 25237826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 525
Target Start/End: Original strand, 25239019 - 25239066
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgc 525  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  25239019 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgc 25239066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 467 - 574
Target Start/End: Original strand, 53150693 - 53150800
Alignment:
Q  467 tgactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattg 566  Q
    ||||||||  ||||||| |||| ||||||||||| | |||||||||||||||||| ||| |   |||||||||  |   |||||||||||||||||||||    
T  53150693 tgactgaccccacaaactaacatgagtcttttcaacatgttttgtcctcactcgcccgctttttgggaaacttctcataaggtcacccatcccaaaattg 53150792  T
Q  567 ctccaagt 574  Q
    ||||||||    
T  53150793 ctccaagt 53150800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 519
Target Start/End: Original strand, 25230989 - 25231030
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactc 519  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25230989 acaaaccaacacgagtcttttcagcgtgttttgtcctcactc 25231030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 532 - 588
Target Start/End: Complemental strand, 41472500 - 41472444
Alignment:
Q  532 ggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaatacgtttaac 588  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||  |||||||||    
T  41472500 ggaaactttccggtaggtcacccatcccaaaattgtttcaagtcaagcacgtttaac 41472444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 15388397 - 15388298
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||  |||||||||| | |||||||||| |||| | |   || |||||| || | ||||||||||||||||||||| ||||||||||    
T  15388397 acaaaccaacacgagttctttcagcgtgctatgtcctcacttgcacacttttaggaaaacttcccagaaggtcacccatcccaaaattgatccaagtcaa 15388298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 15392764 - 15392665
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||  |||||||||| | |||||||||| |||| | |   || |||||| || | ||||||||||||||||||||| ||||||||||    
T  15392764 acaaaccaacacgagttctttcagcgtgctatgtcctcacttgcacacttttaggaaaacttcccagaaggtcacccatcccaaaattgatccaagtcaa 15392665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 15405800 - 15405701
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||| ||  |||||||||| |||||||||||| |||| | |   || |||||| || | ||||||||||||||||||||| ||||||||||    
T  15405800 acaaaccaacacgggttctttcagcgtgctttgtcctcacttgcacacttttaggaaaacttcccagaaggtcacccatcccaaaattgatccaagtcaa 15405701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 15417625 - 15417526
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||| ||| ||  |||||||||| |||||||||||| |||| | |   || |||||| || | ||||||||||||||||||||| ||||||||||    
T  15417625 acaaaccaatacgggttctttcagcgtgctttgtcctcacttgcacacttttaggaaaacttcccagaaggtcacccatcccaaaattgatccaagtcaa 15417526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 478 - 525
Target Start/End: Complemental strand, 18318909 - 18318862
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgc 525  Q
    |||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  18318909 acaaaccaacccgaatcttttcagcgtgttttgttctcactcgcacgc 18318862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 590
Target Start/End: Complemental strand, 15377536 - 15377426
Alignment:
Q  480 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaat 579  Q
    ||||||||||| ||  ||||| |||| |||||||||||| |||| | |   || |||||| || | ||||||||||||||||||||| ||||||||||      
T  15377536 aaaccaacacgggttctttcaacgtgctttgtcctcacttgcacacttttaggaaaacttcccagaaggtcacccatcccaaaattgatccaagtcaagc 15377437  T
Q  580 acgtttaactg 590  Q
    || ||||||||    
T  15377436 acatttaactg 15377426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 25802440 - 25802552
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||  ||||||||||||||||||| ||| |||||||| | |  || ||||||| |  | ||||||||| ||| || | | |||||||||||    
T  25802440 acaaaccaacacacgtcttttcagcgtgttttgaccttactcgcactcttttcgagaaacttcctagaaggtcacccgtcctaagactactccaagtcaa 25802539  T
Q  578 atacgtttaactg 590  Q
    | ||| |||||||    
T  25802540 acacgcttaactg 25802552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 546 - 577
Target Start/End: Complemental strand, 29224510 - 29224479
Alignment:
Q  546 aggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||||||||||||||||||||||||||    
T  29224510 aggtcacccatcccaaaattgctccaagtcaa 29224479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 7477455 - 7477398
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgc 525  Q
    |||||||  |||| ||||||| ||||||||||| |||| ||||| |||||||||||||    
T  7477455 gactgaccccacataccaacatgagtcttttcaacgtgctttgttctcactcgcacgc 7477398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 525
Target Start/End: Complemental strand, 7494145 - 7494088
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgc 525  Q
    |||||||  |||| ||||||| ||||||||||| |||| ||||| |||||||||||||    
T  7494145 gactgaccccacataccaacatgagtcttttcaacgtgctttgttctcactcgcacgc 7494088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 480 - 516
Target Start/End: Complemental strand, 26436300 - 26436264
Alignment:
Q  480 aaaccaacacgagtcttttcagcgtgttttgtcctca 516  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  26436300 aaaccaacacgagtcttttcagcatgttttgttctca 26436264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 107345 - 107467
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||    
T  107345 gactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccgggaaacttcccggtacgtcacccatcccaaaattgc 107444  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  107445 tccaagtcaagcacgcttaactg 107467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 86; Significance: 8e-41; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 477 - 590
Target Start/End: Original strand, 14593 - 14706
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14593 cacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgctccaagtca 14692  T
Q  577 aatacgtttaactg 590  Q
    |  ||| |||||||    
T  14693 agcacgcttaactg 14706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 85; Significance: 3e-40; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 478 - 590
Target Start/End: Complemental strand, 163325 - 163213
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  163325 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaaacttctcggtaggtcacccatcccaaaattgctccaagtcaa 163226  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  163225 gcacgcttaactg 163213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 477 - 590
Target Start/End: Original strand, 163025 - 163138
Alignment:
Q  477 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtca 576  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| ||| ||||||||||||||||||||||||||||||||    
T  163025 cacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgaacgcttaccgagaaacttcccgataggtcacccatcccaaaattgctccaagtca 163124  T
Q  577 aatacgtttaactg 590  Q
    |  ||| |||||||    
T  163125 agcacgcttaactg 163138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 162559 - 162682
Alignment:
Q  468 gactgacaacacaaaccaacacgagtctttt-cagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattg 566  Q
    |||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||| || || ||||||| | |||||||||| ||||||||| |||    
T  162559 gactgaccccacaaaccaacacgagtctttttcagcgtgttttgtcctcactcgcacgcttatcgcgaaacttccaggtaggtcactcatcccaaagttg 162658  T
Q  567 ctccaagtcaaatacgtttaactg 590  Q
    |||||||||||  ||| |||||||    
T  162659 ctccaagtcaagcacgcttaactg 162682  T

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Target: scaffold0022; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 478 - 558
Target Start/End: Original strand, 69707 - 69787
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcc 558  Q
    ||||||||||||||||||||| |||||| |||||| |||||| ||||| | ||   |||||| || | |||||||||||||    
T  69707 acaaaccaacacgagtctttttagcgtggtttgtcatcactcacacgctttcccataaacttccctgaaggtcacccatcc 69787  T

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Target: scaffold1519 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 1583 - 1705
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||| |||||||||||||||||||| || || ||||||||||||| |||||||||||||||||||||||||||    
T  1583 gactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcacatgcttaccgggaaacttcccggtaggtcacccatcccaaaattgc 1682  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  1683 tccaagtcaagcacgcttaactg 1705  T

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Target: scaffold0168 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 3006 - 2884
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||| ||||||||||||||||    
T  3006 gactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtctcccatcccaaaattgc 2907  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  2906 tccaagtcaagcacgcttaactg 2884  T

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Target: scaffold0018 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 10563 - 10442
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||| ||||||||||    
T  10563 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccaggaaacttcccggtaggtcacccat-ccaaaattgc 10465  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  10464 tccaagtcaagcacgcttaactg 10442  T

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Target: scaffold0040 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 468 - 577
Target Start/End: Original strand, 2092 - 2201
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||    
T  2092 gactgaccccacaaaccaacacgagtcttttcaatgtgttttgtcctcactcgcacgcttaccggaaaacttcccggtaggtcacccatcccaaaattgc 2191  T
Q  568 tccaagtcaa 577  Q
    ||||||||||    
T  2192 tccaagtcaa 2201  T

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Target: scaffold0389 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 468 - 590
Target Start/End: Original strand, 13415 - 13537
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||| |||||||||||||||||||||||||||    
T  13415 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacaaagaaacttcccggtaggtcacccatcccaaaattgc 13514  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    || |||||||  ||| |||||||    
T  13515 tcaaagtcaagcacgcttaactg 13537  T

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Target: scaffold0024 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 480 - 590
Target Start/End: Complemental strand, 105972 - 105862
Alignment:
Q  480 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaat 579  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||| ||||||||||||||||||||||||      
T  105972 aaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccaggaaacttctcggtaggtcacacatcccaaaattgctccaagtcaagc 105873  T
Q  580 acgtttaactg 590  Q
    ||| |||||||    
T  105872 acgcttaactg 105862  T

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Target: scaffold0002 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 155021 - 154899
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| |||| | ||||| ||||||| |||||||||||||||| ||||||||||    
T  155021 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactagcacacttaccgagaaacttcccggtaggtcacccattccaaaattgc 154922  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  154921 tccaagtcaagcacgcttaactg 154899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 468 - 523
Target Start/End: Complemental strand, 154566 - 154511
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcac 523  Q
    |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  154566 gactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcac 154511  T

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Target: scaffold0217 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 468 - 577
Target Start/End: Complemental strand, 574 - 465
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| || || || |||||||||| |||||||||||||||||||||||||||    
T  574 gactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacatgcttatcgggaaacttcccggtaggtcacccatcccaaaattgc 475  T
Q  568 tccaagtcaa 577  Q
    |||| |||||    
T  474 tccatgtcaa 465  T

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Target: scaffold0333 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 478 - 574
Target Start/End: Complemental strand, 4814 - 4719
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagt 574  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  4814 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatccc-aaattgctccaagt 4719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 478 - 574
Target Start/End: Complemental strand, 5274 - 5179
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagt 574  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| || | ||||||||||||||||| ||||||||||||||    
T  5274 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaatttccaggtaggtcacccatccc-aaattgctccaagt 5179  T

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Target: scaffold0333; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 534
Target Start/End: Complemental strand, 5377 - 5320
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtg-ttttgtcctcactcgcacgcgtaccggga 534  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  5377 acaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacacttaccggga 5320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 481 - 590
Target Start/End: Original strand, 17493 - 17602
Alignment:
Q  481 aaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaaata 580  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||  ||||||||||||||| || | | |||||||||||  |    
T  17493 aaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgaaaaactttcgagtaggtcacccatccaaagagtactccaagtcaagca 17592  T
Q  581 cgtttaactg 590  Q
    || |||||||    
T  17593 cgcttaactg 17602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 478 - 590
Target Start/End: Original strand, 18027 - 18139
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||  |||||  |||||||||  |||||||||||||| || | | |||||||||||    
T  18027 acaaatcaacacgagtcttttcagcgtgttgtgtcctcactcgcacgtttaccgaaaaactttccaataggtcacccatccaaagactactccaagtcaa 18126  T
Q  578 atacgtttaactg 590  Q
      ||| |||||||    
T  18127 gcacgcttaactg 18139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 479 - 577
Target Start/End: Complemental strand, 245335 - 245237
Alignment:
Q  479 caaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||| | ||| ||||||| || | |||||||||||| ||||||||||| |||||||    
T  245335 caaaccaacacgagtcttttcaccgtgttttgtcctcactcacacgctttccgagaaacttcccagaaggtcacccatctcaaaattgctctaagtcaa 245237  T

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Target: scaffold0005; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 245812 - 245690
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgc 567  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||||||| ||| | | ||| ||||||| ||   || ||||||||| | |||||||    
T  245812 gactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcacacactttccgagaaacttcccaaaagatcacccatctcgaaattgc 245713  T
Q  568 tccaagtcaaatacgtttaactg 590  Q
    ||||||||||  ||| |||||||    
T  245712 tccaagtcaagcacgcttaactg 245690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 478 - 531
Target Start/End: Complemental strand, 2350 - 2297
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccg 531  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  2350 acaaaccaacacgagtcttttcagcgtgttttctcctcactcgcacgcttaccg 2297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 483 - 577
Target Start/End: Complemental strand, 7190 - 7097
Alignment:
Q  483 ccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    |||||||||||||||||| | ||||| |||| ||||| || || |  |||||||||||||   ||||||||||| ||||||||||||||||||||    
T  7190 ccaacacgagtcttttcaccttgttt-gtccccactcacatgcttttcgggaaactttccaaaaggtcacccataccaaaattgctccaagtcaa 7097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 44613 - 44712
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcgtaccgggaaactttccggtaggtcacccatcccaaaattgctccaagtcaa 577  Q
    ||||||||| ||| ||  |||||||||| |||||||||||| |||| | |   || |||||| || | ||||||||||||||||||||| ||||||||||    
T  44613 acaaaccaatacgggttctttcagcgtgctttgtcctcacttgcacacttttaggaaaacttcccagaaggtcacccatcccaaaattgatccaagtcaa 44712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 478 - 524
Target Start/End: Original strand, 37205 - 37251
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacg 524  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||    
T  37205 acaaaccaacacgaatcttttcagcgtgtttttccctcactcgcacg 37251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 509
Target Start/End: Original strand, 62989 - 63030
Alignment:
Q  468 gactgacaacacaaaccaacacgagtcttttcagcgtgtttt 509  Q
    |||||||  |||||||||| ||||||||||||||||||||||    
T  62989 gactgaccccacaaaccaatacgagtcttttcagcgtgtttt 63030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 506
Target Start/End: Complemental strand, 29 - 1
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgt 506  Q
    |||||||||||||||||||||||||||||    
T  29 acaaaccaacacgagtcttttcagcgtgt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 478 - 522
Target Start/End: Complemental strand, 26322 - 26278
Alignment:
Q  478 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcgca 522  Q
    ||||| |||||||||||||||||||||||| ||| ||| ||||||    
T  26322 acaaatcaacacgagtcttttcagcgtgttatgttctccctcgca 26278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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