View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10773_high_3 (Length: 240)
Name: NF10773_high_3
Description: NF10773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10773_high_3 |
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Alignment Details
Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 83 - 225
Target Start/End: Complemental strand, 17750637 - 17750495
Alignment:
| Q |
83 |
gtatggtgtgtgtgcaatcaacgcatatgcttactatctagtaaaaaatactggagtagaatctgaatctagcaactcaacaagtattatctttgactat |
182 |
Q |
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| T |
17750637 |
gtatggcgtgtgtgcaattaatacacaagcttactatccagtcaaaaattctggagtagaatctgaatctagcaagtcaacaagtgttatctttgactat |
17750538 |
T |
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| Q |
183 |
tctcccttcatgtaaaaaatccgagaactaggaactcatgtat |
225 |
Q |
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| T |
17750537 |
tctcccttcatgtaagaaatccgagaactaggaactcatgtat |
17750495 |
T |
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