View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10773_low_1 (Length: 434)

Name: NF10773_low_1
Description: NF10773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10773_low_1
NF10773_low_1
[»] chr1 (10 HSPs)
chr1 (1-416)||(9168266-9168672)
chr1 (103-289)||(28664975-28665163)
chr1 (158-289)||(15629325-15629458)
chr1 (153-289)||(15630119-15630257)
chr1 (103-289)||(6696015-6696199)
chr1 (210-290)||(2071561-2071642)
chr1 (192-289)||(2073379-2073479)
chr1 (192-289)||(2076911-2077011)
chr1 (218-290)||(2075099-2075172)
chr1 (245-289)||(370037-370081)
[»] chr3 (10 HSPs)
chr3 (103-289)||(18088060-18088244)
chr3 (103-289)||(42531289-42531475)
chr3 (158-289)||(50294658-50294787)
chr3 (111-241)||(30057133-30057263)
chr3 (192-289)||(46691463-46691559)
chr3 (192-289)||(50297460-50297557)
chr3 (147-289)||(814354-814498)
chr3 (205-288)||(16462968-16463050)
chr3 (199-289)||(42530590-42530679)
chr3 (199-289)||(814260-814349)
[»] chr7 (15 HSPs)
chr7 (103-267)||(6840532-6840695)
chr7 (120-289)||(15614192-15614361)
chr7 (95-289)||(46964337-46964529)
chr7 (103-289)||(2628168-2628354)
chr7 (103-289)||(46962991-46963175)
chr7 (205-288)||(21814428-21814510)
chr7 (154-216)||(5763704-5763766)
chr7 (160-243)||(44337393-44337476)
chr7 (103-141)||(22554693-22554731)
chr7 (195-289)||(44339050-44339144)
chr7 (213-289)||(6841471-6841547)
chr7 (163-289)||(30867102-30867229)
chr7 (120-229)||(39349344-39349454)
chr7 (220-289)||(21811668-21811737)
chr7 (192-228)||(26403508-26403544)
[»] chr4 (8 HSPs)
chr4 (107-289)||(16543360-16543542)
chr4 (103-289)||(16871651-16871835)
chr4 (96-289)||(54146612-54146800)
chr4 (95-282)||(16869513-16869702)
chr4 (147-292)||(14458536-14458681)
chr4 (147-240)||(24131825-24131918)
chr4 (103-292)||(54148272-54148454)
chr4 (115-254)||(37945519-37945655)
[»] chr2 (9 HSPs)
chr2 (95-290)||(8985573-8985766)
chr2 (150-289)||(32291155-32291294)
chr2 (122-289)||(8986927-8987092)
chr2 (103-185)||(29408968-29409050)
chr2 (216-290)||(29409109-29409183)
chr2 (217-289)||(32276940-32277011)
chr2 (178-289)||(38583491-38583602)
chr2 (153-292)||(1172740-1172878)
chr2 (192-241)||(38588212-38588261)
[»] scaffold0511 (1 HSPs)
scaffold0511 (97-289)||(11187-11377)
[»] chr6 (13 HSPs)
chr6 (97-289)||(18792764-18792954)
chr6 (103-288)||(33423902-33424087)
chr6 (107-289)||(21862689-21862869)
chr6 (122-251)||(22868499-22868628)
chr6 (95-289)||(10740574-10740762)
chr6 (154-289)||(18984497-18984632)
chr6 (103-260)||(9290584-9290736)
chr6 (160-289)||(10741772-10741901)
chr6 (154-240)||(13166484-13166569)
chr6 (156-228)||(9365085-9365156)
chr6 (101-151)||(9363118-9363168)
chr6 (95-137)||(21858191-21858233)
chr6 (256-289)||(21858039-21858072)
[»] chr5 (6 HSPs)
chr5 (123-287)||(11343870-11344032)
chr5 (103-287)||(24137600-24137784)
chr5 (85-140)||(28432144-28432199)
chr5 (192-290)||(11320489-11320586)
chr5 (172-287)||(40784160-40784275)
chr5 (103-222)||(6643430-6643547)
[»] chr8 (10 HSPs)
chr8 (92-286)||(33199412-33199604)
chr8 (102-249)||(44374651-44374797)
chr8 (202-289)||(43615458-43615545)
chr8 (160-243)||(20241071-20241154)
chr8 (160-243)||(20251913-20251996)
chr8 (195-289)||(20242727-20242821)
chr8 (195-289)||(20250339-20250433)
chr8 (107-229)||(43516186-43516305)
chr8 (147-292)||(16578749-16578896)
chr8 (102-188)||(14699336-14699422)
[»] scaffold0002 (1 HSPs)
scaffold0002 (148-289)||(406215-406356)
[»] scaffold0325 (1 HSPs)
scaffold0325 (192-290)||(14540-14639)


Alignment Details
Target: chr1 (Bit Score: 333; Significance: 0; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 1 - 416
Target Start/End: Original strand, 9168266 - 9168672
Alignment:
Q  1 agtgcaatgcaatccatcagaagaatnnnnnnnnngggagaagtgcaatgagtcagaagaaataatagggggagaagtgcaatcaactaggctctgatac 100  Q
    ||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9168266 agtgcaatgcaatccatcagaagaattaaaaaaaggggagaagtgcaatgagtcagaagaaataatagggggagaagtgcaatcaactaggctctgatac 9168365  T
Q  101 catgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgt 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9168366 catgttaacaatacatatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgt 9168465  T
Q  201 tataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaacacatttttgaat 300  Q
    |||||||||||||||||||||         ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  9168466 tataagagaatatataataaa---------actgtaacttactgatataaaggttcaatagcttaagtgcaatactttattatctaacacctttttgaat 9168556  T
Q  301 tggtcatttgtgccttctgttgaaattgaaaacattctcgtccttaataagccagaagatcaattgacagatgctaaatctaagaaagttcaatatgata 400  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9168557 tggtcatttgtgccttctattgaaattgaaaacattcccgtccttaataagccagaagatcaattgacagatgctaaatctaagaaagttcaatatgata 9168656  T
Q  401 tgaaggtgtgaaacat 416  Q
    ||||||||||||||||    
T  9168657 tgaaggtgtgaaacat 9168672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 103 - 289
Target Start/End: Complemental strand, 28665163 - 28664975
Alignment:
Q  103 tgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttca-taaaatatcaataacttgatatcacaaaatgtt 201  Q
    |||||| |||||||||||||||| ||||||||||||||| |   ||||| |||||||||||||||| || |||| ||||| ||| |||| ||||||||||    
T  28665163 tgttaagaatacagatacaaaatggagaaagagagaatagg---aacaacgacggctagggtttcattagaataacaatagcttaatattacaaaatgtt 28665067  T
Q  202 ataagagaatatataataaaacctaatgtactataacttactgatataaaggt----tc-aatagcttaagcgcaatactttattatctaaca 289  Q
    || |||||||||||||| |||||||||| ||| ||||||||| ||||||||||    || ||||| |||||| ||||||||||||||||||||    
T  28665066 atgagagaatatataat-aaacctaatggactctaacttactaatataaaggtctaatctaatagtttaagctcaatactttattatctaaca 28664975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 289
Target Start/End: Original strand, 15629325 - 15629458
Alignment:
Q  158 ctagggtttcataaaatat--caataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtactataacttactgatataaaggtt 255  Q
    |||||||||||||||||||  ||||| ||| |||| |||||| |||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||||     
T  15629325 ctagggtttcataaaatatttcaatagcttaatattacaaaaggttataagagaatatataataaaatctaatgaactctaacttactaatataaaggtc 15629424  T
Q  256 caatagcttaagcgcaatactttattatctaaca 289  Q
    ||||| ||||||| ||||| ||||||||||||||    
T  15629425 caataacttaagcccaatattttattatctaaca 15629458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 153 - 289
Target Start/End: Original strand, 15630119 - 15630257
Alignment:
Q  153 gacggctagggtttcataaaatat--caataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtactataacttactgatataa 250  Q
    ||||||||||||||||||||||||  ||||||||| ||||  ||||| ||||||||||||||||||||||||||||||  ||| ||||||||| ||||||    
T  15630119 gacggctagggtttcataaaatatttcaataacttaatattccaaaaggttataagagaatatataataaaacctaatagactctaacttactaatataa 15630218  T
Q  251 aggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||  |||||  |||||| |||||||||||||| |||||    
T  15630219 aggcccaataatttaagctcaatactttattatttaaca 15630257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 103 - 289
Target Start/End: Complemental strand, 6696199 - 6696015
Alignment:
Q  103 tgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaa-tatcaataacttgatatcacaaaatgtt 201  Q
    ||||||||||||||||| ||||| ||||||||||||||| || ||||   |||||||| | |||||| | | || ||||| ||| | || |||||| |||    
T  6696199 tgttaacaatacagatataaaatggagaaagagagaataggaacaac---gacggctacgatttcattagactaacaatagcttaacattacaaaaggtt 6696103  T
Q  202 ataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||||||||||| |||||||| |||||| ||| ||||||||| ||||||| |  ||||| |||||||  |||||||||||||||||||    
T  6696102 ataagagaatatttaataaaatctaatggactctaacttactaatataaatgcccaataacttaagcctaatactttattatctaaca 6696015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 290
Target Start/End: Original strand, 2071561 - 2071642
Alignment:
Q  210 atatataataaaacctaatgtacta-taacttactgatataaaggttcaatagcttaagcgcaatactttattatctaacac 290  Q
    ||||||| |||||||||||| |||  ||||||||| |||| ||||  ||||||||||||| ||||| |||||||||||||||    
T  2071561 atatatactaaaacctaatggactgctaacttactaatattaaggcccaatagcttaagcccaatattttattatctaacac 2071642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 289
Target Start/End: Original strand, 2073379 - 2073479
Alignment:
Q  192 acaaaatgttataagagaatatataa--taaaacctaatgtacta-taacttactgatataaaggttcaatagcttaagcgcaatactttattatctaac 288  Q
    |||||| ||||||||||||||||||   |||||||||||| |||  ||||||||| |||| ||||   |||||||||||| ||||| |||||||||||||    
T  2073379 acaaaaagttataagagaatatatatactaaaacctaatggactgctaacttactaatattaaggactaatagcttaagcccaatattttattatctaac 2073478  T
Q  289 a 289  Q
    |    
T  2073479 a 2073479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 289
Target Start/End: Original strand, 2076911 - 2077011
Alignment:
Q  192 acaaaatgttataagagaatatataa--taaaacctaatgtacta-taacttactgatataaaggttcaatagcttaagcgcaatactttattatctaac 288  Q
    |||||| ||||||||||||||||||   |||||||||||| |||  ||||||||| |||| ||||   |||||||||||| ||||| |||||||||||||    
T  2076911 acaaaaagttataagagaatatatatactaaaacctaatggactgctaacttactaatattaaggactaatagcttaagcccaatattttattatctaac 2077010  T
Q  289 a 289  Q
    |    
T  2077011 a 2077011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 2075099 - 2075172
Alignment:
Q  218 taaaacctaatgtacta-taacttactgatataaaggttcaatagcttaagcgcaatactttattatctaacac 290  Q
    |||||||||||| |||  ||||||||| |||| ||||  ||||||||||||| ||||| |||||||||||||||    
T  2075099 taaaacctaatggactgctaacttactaatattaaggcccaatagcttaagcccaatattttattatctaacac 2075172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 370081 - 370037
Alignment:
Q  245 atataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||||||||| |||||||||||||  ||||||||||||| |||||    
T  370081 atataaaggtccaatagcttaagcctaatactttattatttaaca 370037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 103 - 289
Target Start/End: Original strand, 18088060 - 18088244
Alignment:
Q  103 tgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgtta 202  Q
    |||||| |||||  ||||||||||||||||||||||||| |   |||||| ||||||||||||||||| ||| |||||| |||| ||| |||||||||||    
T  18088060 tgttaaaaataccaatacaaaatagagaaagagagaatagggaaaacaaa-acggctagggtttcatagaatgtcaatagcttgctattacaaaatgtta 18088158  T
Q  203 taagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    | |||||||||||||| |||||||||| ||| ||||||||| |||||||||   |||||||||||| ||||||||||||||| ||||    
T  18088159 tgagagaatatataat-aaacctaatggactctaacttactaatataaaggcctaatagcttaagcccaatactttattatccaaca 18088244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 103 - 289
Target Start/End: Complemental strand, 42531475 - 42531289
Alignment:
Q  103 tgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgtta 202  Q
    ||||||||| |||||||||||||  ||||||||| |||  ||  ||||| |  ||||||||||||||| |||||||||  ||| | || |||||| ||||    
T  42531475 tgttaacaaaacagatacaaaatcaagaaagagaaaatgagaataacaacggaggctagggtttcatacaatatcaatggcttaacattacaaaaggtta 42531376  T
Q  203 taagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    ||||||||||||||||||||||||||| ||| ||||||||| ||||||| || ||||| || |||| |||| |||||||||||||||    
T  42531375 taagagaatatataataaaacctaatgaactttaacttactaatataaaagtccaataactcaagcccaatcctttattatctaaca 42531289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 50294787 - 50294658
Alignment:
Q  158 ctagggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttca 257  Q
    ||||||||||  | ||||| ||| |||| |||| |||||||||||||||| ||||||||||||||||||||| ||| ||||||| | ||||||||| |||    
T  50294787 ctagggtttccaataatattaattacttaatattacaaaatgttataagataatatataataaaacctaatggactctaacttattaatataaagg-tca 50294689  T
Q  258 atagcttaagcgcaatactttattatctaaca 289  Q
    ||| ||||||| ||||||||||| ||||||||    
T  50294688 ataacttaagc-caatactttatcatctaaca 50294658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 111 - 241
Target Start/End: Complemental strand, 30057263 - 30057133
Alignment:
Q  111 atacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgttataagagaa 210  Q
    ||||| |||||||||||||||  ||||||||||| ||||||||||| ||||| ||||| | || ||||||| ||| | || ||||||  |||||||||||    
T  30057263 atacaaatacaaaatagagaacaagagaatatgaacaacaaagacgactaggatttcagagaacatcaatagcttaacattacaaaagattataagagaa 30057164  T
Q  211 tatataataaaacctaatgtactataactta 241  Q
    ||||||| |||| |||||| ||| |||||||    
T  30057163 tatataacaaaatctaatggactctaactta 30057133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 192 - 289
Target Start/End: Original strand, 46691463 - 46691559
Alignment:
Q  192 acaaaatgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||||| ||||||||||||||||||||||||| ||||| ||| |||||||||  ||||||||| ||||| ||||||  ||||||||||||||||||||    
T  46691463 acaaaaggttataagagaatatataataaaac-taatggactctaacttactagtataaaggtccaataacttaagttcaatactttattatctaaca 46691559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 50297557 - 50297460
Alignment:
Q  192 acaaaatgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||||| |||||||| ||| |||||||||||| ||||| ||| ||||||||| ||||||||  |||||| ||||||| ||||||||||||||||||||    
T  50297557 acaaaaggttataagtgaacatataataaaacataatgaactctaacttactaatataaagactcaataacttaagcacaatactttattatctaaca 50297460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 289
Target Start/End: Original strand, 814354 - 814498
Alignment:
Q  147 aacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatataata--aaacctaatgtactataacttactg 244  Q
    ||||||||| ||||| |||||||| |||| ||||| ||| | || |||| | ||||||||||||||||||  |  |||||||||| ||| |||||||||     
T  814354 aacaaagacagctagagtttcatagaataccaatagcttaacattacaagaggttataagagaatatatataacgaaacctaatggactctaacttacta 814453  T
Q  245 atataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    ||||||| |  ||||| ||||||  ||||||||||||||||||||    
T  814454 atataaatgcccaataacttaagtccaatactttattatctaaca 814498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 205 - 288
Target Start/End: Complemental strand, 16463050 - 16462968
Alignment:
Q  205 agagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaac 288  Q
    ||||||||||||||||| ||||||| ||| ||||||||| ||||||||| | |||| ||||||| |||||||||||||||||||    
T  16463050 agagaatatataataaa-cctaatggactctaacttactaatataaaggcttaatatcttaagctcaatactttattatctaac 16462968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 199 - 289
Target Start/End: Complemental strand, 42530679 - 42530590
Alignment:
Q  199 gttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||| ||||||| | ||| || || |||  ||||||||||||||||||||    
T  42530679 gttataagagaatatataataaaacctaatgaactttaatttactaatataaaag-tcactaactcaagtccaatactttattatctaaca 42530590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 289
Target Start/End: Complemental strand, 814349 - 814260
Alignment:
Q  199 gttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||||||||||||||| ||  |||||||||| ||| ||||||||| ||||||| |  ||||| ||||||  ||||||||||||||||||||    
T  814349 gttataagagaatata-aacgaaacctaatggactctaacttactaatataaatgcccaataacttaagtccaatactttattatctaaca 814260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 103 - 267
Target Start/End: Original strand, 6840532 - 6840695
Alignment:
Q  103 tgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgtta 202  Q
    ||||||||||| |||||||||||||||||| ||||||||| |  ||||||||||| || |||||||||||||||||||| ||| | || |||||| ||||    
T  6840532 tgttaacaatatagatacaaaatagagaaacagagaatataag-aacaaagacggttatggtttcataaaatatcaatagctttacattacaaaaggtta 6840630  T
Q  203 taagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaag 267  Q
    ||| ||||||||||||||||||||| | ||| |||||||||||||||||||  ||||| ||||||    
T  6840631 taaaagaatatataataaaacctaacggactctaacttactgatataaaggcccaataacttaag 6840695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 120 - 289
Target Start/End: Original strand, 15614192 - 15614361
Alignment:
Q  120 caaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatataata 219  Q
    ||||||||||||||||| |||   | | | ||||||  ||||||||||||| |||| ||||| ||| |||| |||||| ||||||| |||||||||||||    
T  15614192 caaaatagagaaagagataatcaaaacgataaagacaactagggtttcatagaataacaatagcttaatattacaaaaggttataaaagaatatataata 15614291  T
Q  220 aaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||||||||| ||| |||||| || |||||||||| ||||| ||||||| ||||||||||||||||||||    
T  15614292 aaacctaatggactctaacttgctaatataaaggtccaataacttaagcccaatactttattatctaaca 15614361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 95 - 289
Target Start/End: Original strand, 46964337 - 46964529
Alignment:
Q  95 tgataccatgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaa-tatcaataacttgatatcac 193  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||   |||||||| | |||||| | | || ||||| ||| |||| ||    
T  46964337 tgataccatgttaacaatacagatataaaatggagaaagagagaataggaacaac---gacggctacgatttcattagactaacaatagcttaatattac 46964433  T
Q  194 aaaatgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||| |||||||||||||||||||||||| |||||| ||| |||| |||| ||||||| |  ||||| |||||||  ||| |||||||||||||||    
T  46964434 aaaaagttataagagaatatataataaaatctaatggactctaacgtactaatataaatgcccaataacttaagcctaatcctttattatctaaca 46964529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 103 - 289
Target Start/End: Original strand, 2628168 - 2628354
Alignment:
Q  103 tgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgtta 202  Q
    ||||||||| |||||||||||||  | ||||||| |||  ||  ||||| |  || |||||||||||| ||||||||||  || | || ||||||  |||    
T  2628168 tgttaacaaaacagatacaaaatcaaaaaagagaaaatgagaataacaacggaggttagggtttcatataatatcaatagtttaacattacaaaaaatta 2628267  T
Q  203 taagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    | ||||||||||||||||||||||||| ||| ||||||||| ||||||||  |||||| ||||||| ||||||||||||||||||||    
T  2628268 tgagagaatatataataaaacctaatggactctaacttactaatataaagactcaataacttaagctcaatactttattatctaaca 2628354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 103 - 289
Target Start/End: Original strand, 46962991 - 46963175
Alignment:
Q  103 tgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataa-aatatcaataacttgatatcacaaaatgtt 201  Q
    ||||||||||||||||| ||||| ||||||||||||||| || ||||   |||||||| | |||||| | |||| ||||| ||| | || |||||| |||    
T  46962991 tgttaacaatacagatataaaatggagaaagagagaataggaacaac---gacggctacgatttcattataataacaatagcttaacattacaaaaggtt 46963087  T
Q  202 ataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||||||||||| |||||||| |||||| ||| ||||||||| ||||||| |  ||||| |||||||  |||||||||||||||||||    
T  46963088 ataagagaatatctaataaaatctaatggactctaacttactaatataaatgcccaataacttaagcctaatactttattatctaaca 46963175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 205 - 288
Target Start/End: Complemental strand, 21814510 - 21814428
Alignment:
Q  205 agagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaac 288  Q
    ||||||||||||||||| ||||||| ||| ||||||||| ||||||||| | |||| ||||||| |||||||||||||||||||    
T  21814510 agagaatatataataaa-cctaatggactctaacttactaatataaaggcttaatatcttaagctcaatactttattatctaac 21814428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 5763766 - 5763704
Alignment:
Q  154 acggctagggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatata 216  Q
    |||||| |||| |||||||||||||||| ||| |||| ||||||||||| |||||||||||||    
T  5763766 acggcttgggtgtcataaaatatcaatatcttaatattacaaaatgttacaagagaatatata 5763704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 44337476 - 44337393
Alignment:
Q  160 agggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtactataacttact 243  Q
    |||||||||||||||| ||||| | |   || || |||||||||||||||||||||||||||| |||| | ||| |||||||||    
T  44337476 agggtttcataaaataacaatagcattgcattactaaatgttataagagaatatataataaaatctaacggactctaacttact 44337393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 22554693 - 22554731
Alignment:
Q  103 tgttaacaatacagatacaaaatagagaaagagagaata 141  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  22554693 tgttaacaatacagatacaaaatagacaaagagagaata 22554731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 289
Target Start/End: Complemental strand, 44339144 - 44339050
Alignment:
Q  195 aaatgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    ||||||||||| ||||||||||||||||  |||   ||| ||||||||| |||||||||| ||||| |||||   ||||| |||||||| |||||    
T  44339144 aaatgttataacagaatatataataaaatttaaaagactttaacttactaatataaaggtccaataacttaaatccaatattttattatttaaca 44339050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 6841471 - 6841547
Alignment:
Q  213 tataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||||||||| |||| | ||| |||||||||||||||||||  ||||| ||||||  | ||| ||||||||||||||    
T  6841471 tataataaaatctaacggactctaacttactgatataaaggcccaataacttaagtccgatattttattatctaaca 6841547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 289
Target Start/End: Complemental strand, 30867229 - 30867102
Alignment:
Q  163 gtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtacta---taacttactgatataaaggttcaat 259  Q
    |||| ||| |||||||||||||| |||| |||||| || | |||||||||||||   |||||||||| ||||   ||||| | | ||| ||||| || ||    
T  30867229 gttttatagaatatcaataacttaatattacaaaaagtcacaagagaatatata--gaaacctaatgaactatattaactaagtaatacaaagggtcgat 30867132  T
Q  260 agcttaagcgcaatactttattatctaaca 289  Q
    || |||||  ||||||||||||||||||||    
T  30867131 agtttaaggtcaatactttattatctaaca 30867102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 39349344 - 39349454
Alignment:
Q  120 caaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatata-at 218  Q
    ||||||| | |||||||||||  || |||||| |  ||| ||||||||||| |||| || |||||||| || |||||| |||| | ||||||||||| ||    
T  39349344 caaaataaataaagagagaatgggaacaacaatggaggcaagggtttcatagaatagcattaacttgacattacaaaaggttacaggagaatatatatat 39349443  T
Q  219 aaaacctaatg 229  Q
    ||| |||||||    
T  39349444 aaatcctaatg 39349454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 21811737 - 21811668
Alignment:
Q  220 aaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||||||||  ||| ||||||||| |||||||||   |||||||||| | |||||| |||||||||||||    
T  21811737 aaacctaattgactctaacttactaatataaaggcctaatagcttaaacccaatacattattatctaaca 21811668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 26403544 - 26403508
Alignment:
Q  192 acaaaatgttataagagaatatataataaaacctaat 228  Q
    |||||| |||||||||||||||||||||||| |||||    
T  26403544 acaaaaagttataagagaatatataataaaatctaat 26403508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 4e-39; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 107 - 289
Target Start/End: Complemental strand, 16543542 - 16543360
Alignment:
Q  107 aacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgttataag 206  Q
    ||||| ||| ||||||| |||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| ||| | ||  ||||| |||| | |    
T  16543542 aacaaaacaaatacaaattagagaaagagacaatatgaacaacaaagacggctagggtttcatagaatatcaataccttaacattgcaaaaggttacatg 16543443  T
Q  207 agaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    ||||||||||||||||| ||||| ||| ||||||||| ||||||| |  ||||| ||||||  || |||||||||||||||||    
T  16543442 agaatatataataaaacttaatgaactctaacttactaatataaaaggccaataacttaagtccattactttattatctaaca 16543360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 103 - 289
Target Start/End: Complemental strand, 16871835 - 16871651
Alignment:
Q  103 tgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaa-tatcaataacttgatatcacaaaatgtt 201  Q
    ||||||||||||||||||||||| ||||||||||||| | || ||||   ||||||||||||||||| | | || ||||| ||| | || |||||| |||    
T  16871835 tgttaacaatacagatacaaaatggagaaagagagaacaagaacaac---gacggctagggtttcattagactaacaatagcttaacattacaaaaggtt 16871739  T
Q  202 ataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||||| |||||||||||||| |||||| ||| ||||||||| ||||||| |  ||||| |||||||  |||||||||||||||||||    
T  16871738 ataagataatatataataaaatctaatggactctaacttactaatataaatgcccaataacttaagcctaatactttattatctaaca 16871651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 96 - 289
Target Start/End: Complemental strand, 54146800 - 54146612
Alignment:
Q  96 gataccatgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcat-aaaatatcaataacttgatatcaca 194  Q
    |||| |||||||||||||||  |||||||||| |||||| |||  |    ||||||||||||||||| |||||| |||||||||||| ||| |||| |||    
T  54146800 gatatcatgttaacaataca--tacaaaatagggaaagatagataa----caacaaagacggctagg-tttcattaaaatatcaatagcttaatattaca 54146708  T
Q  195 aaatgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttc--aatagcttaagcgcaatactttattatctaaca 289  Q
    ||||||||| ||||||||||| || ||| |||||| ||| ||||||||| |||||||||  |  ||||| ||||||  |||||||||||||||||||    
T  54146707 aaatgttatgagagaatatatgat-aaatctaatggactctaacttactaatataaaggcgcctaatagtttaagcttaatactttattatctaaca 54146612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 95 - 282
Target Start/End: Complemental strand, 16869702 - 16869513
Alignment:
Q  95 tgataccatgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataa-aatatcaataacttgatatcac 193  Q
    ||||||||||||||||||||||||| || || ||||||||||||||| || ||||   |||||||| | |||||| | |||| ||||| ||| |  | ||    
T  16869702 tgataccatgttaacaatacagatataacatggagaaagagagaataggaacaac---gacggctacgatttcattataataacaatagcttaacgttac 16869606  T
Q  194 aa----aatgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttatta 282  Q
    ||    || ||||||||||| |||||||||||| |||||| ||| ||||||||| ||||||| |  ||||| ||||||| |||||||||||||    
T  16869605 aacaaaaaagttataagagagtatataataaaatctaatgaactctaacttactaatataaaagcccaataacttaagctcaatactttatta 16869513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 147 - 292
Target Start/End: Complemental strand, 14458681 - 14458536
Alignment:
Q  147 aacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtacta-taacttactga 245  Q
    |||||||||||| ||||||||||| ||   ||||||||| ||||||||||| |||| |||||||| ||| ||||||||||||  |||| ||||||| | |    
T  14458681 aacaaagacggcaagggtttcatagaaatccaataacttaatatcacaaaaggttacaagagaatgtat-ataaaacctaatagactactaacttagtaa 14458583  T
Q  246 tataaaggttcaatagcttaagcgcaatactttattatctaacacat 292  Q
    |||||||   ||||||||||||| |||| | |||| |||||||||||    
T  14458582 tataaagacacaatagcttaagcccaattccttatgatctaacacat 14458536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 24131918 - 24131825
Alignment:
Q  147 aacaaagacggctagggtttcat-aaaatatcaataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtactataactt 240  Q
    |||||||||| |||||||||||| ||||||| ||| | || | || ||||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  24131918 aacaaagacgactagggtttcattaaaatat-aatgatttaacattacaaaatgttataagagaacatataataaaacctaatggactctaactt 24131825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 103 - 292
Target Start/End: Complemental strand, 54148454 - 54148272
Alignment:
Q  103 tgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcat-aaaatatcaataacttgatatcacaaaatgtt 201  Q
    |||||||||||||  ||||||||||||||||| |||  |    |||| |||||||| ||| |||| | |||||||||||| ||| |||  ||||| ||||    
T  54148454 tgttaacaataca--tacaaaatagagaaagatagataa----caacgaagacggccaggatttcgttaaaatatcaatagcttaataatacaaa-tgtt 54148362  T
Q  202 ataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaacacat 292  Q
    || ||||||||||||||||| | || || ||| ||||||||| ||||||| |   |||||||||||| |||| |||| |||||||||||||    
T  54148361 atgagagaatatataataaatc-tattggactctaacttactaatataaaagcctaatagcttaagctcaatgctttgttatctaacacat 54148272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 254
Target Start/End: Complemental strand, 37945655 - 37945519
Alignment:
Q  115 agatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcat-aaaatatcaataacttgatatcacaaaatgttataagagaatat 213  Q
    |||||||||||| |||||||||||  |    ||| || ||| ||||| ||||||| |||||||||||   || | || |||||| |||||||||||||||    
T  37945655 agatacaaaataaagaaagagagataa----caagaacgacagctagagtttcattaaaatatcaattgattaacattacaaaaggttataagagaatat 37945560  T
Q  214 ataataaaacctaatgtactataacttactgatataaaggt 254  Q
    |||||||||  ||||| ||| ||||||||| ||||||||||    
T  37945559 ataataaaatttaatggactctaacttactaatataaaggt 37945519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 4e-39; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 95 - 290
Target Start/End: Complemental strand, 8985766 - 8985573
Alignment:
Q  95 tgataccatgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaa-tatcaataacttgatatcac 193  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||   |||||||| | |||||| | | || ||||| ||| | || ||    
T  8985766 tgataccatgttaacaatacagatataaaatggagaaagagagaataggaacaac---gacggctacgatttcattagactaacaatagcttaacattac 8985670  T
Q  194 aaaatgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaacac 290  Q
    |||| |||||||||||||||||||||||| |||||| ||| ||||||||| ||||||| || ||||| |||||||  ||||||||||||||||||||    
T  8985669 aaaaggttataagagaatatataataaaatctaatggactttaacttactaatataaatgtccaataacttaagcctaatactttattatctaacac 8985573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 32291294 - 32291155
Alignment:
Q  150 aaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtactataacttactgatata 249  Q
    ||||||||||| ||||||||| |||||||||  |||   || |||||| ||||||||||||||||||||||| | ||||| ||| ||||||||| |||||    
T  32291294 aaagacggctatggtttcatagaatatcaattgcttttcattacaaaaggttataagagaatatataataaatcttaatggactctaacttactaatata 32291195  T
Q  250 aaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||   ||||| ||||||| ||||||||||||||||||||    
T  32291194 aagacacaataacttaagctcaatactttattatctaaca 32291155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 122 - 289
Target Start/End: Complemental strand, 8987092 - 8986927
Alignment:
Q  122 aaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaa-tatcaataacttgatatcacaaaatgttataagagaatatataataa 220  Q
    |||| ||||||||||||||| || ||||   |||||||| | |||||| | | || ||||| ||| | || |||||| ||||||||||||||||||||||    
T  8987092 aaatggagaaagagagaataggaacaac---gacggctacgatttcattagactaacaatagcttaacattacaaaaggttataagagaatatataataa 8986996  T
Q  221 aacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    ||  ||||| ||| ||||||||| ||||||| |  ||||| |||||||  |||||||||||||||||||    
T  8986995 aatttaatggactctaacttactaatataaatgcccaataacttaagcctaatactttattatctaaca 8986927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 185
Target Start/End: Original strand, 29408968 - 29409050
Alignment:
Q  103 tgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataactt 185  Q
    ||||||||||||| ||||||||||||||||||||||||| || ||||||||||||  ||| ||||||| ||||  ||||||||    
T  29408968 tgttaacaatacatatacaaaatagagaaagagagaataagaacaacaaagacggtcaggatttcatagaataataataactt 29409050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 29409109 - 29409183
Alignment:
Q  216 aataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaacac 290  Q
    |||||||  ||||| ||| ||||||||| | ||||| | |||||||||||||| |||||||||||||||||||||    
T  29409109 aataaaatttaatggactctaacttactaaaataaatgctcaatagcttaagcacaatactttattatctaacac 29409183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 32277011 - 32276940
Alignment:
Q  217 ataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    ||||||||||||| ||| ||||||||| |||||||||| ||||| ||||||| |||||| | |||||||||||    
T  32277011 ataaaacctaatggactctaacttactaatataaaggtccaataacttaagctcaatac-taattatctaaca 32276940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 289
Target Start/End: Original strand, 38583491 - 38583602
Alignment:
Q  178 aataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactt 277  Q
    ||||| |||| || |||||| |||||||| ||||||||||||||| |||| |   | ||||||||| |||||||||  |||||  ||||||  |||| ||    
T  38583491 aataaattgacattacaaaaggttataagcgaatatataataaaatctaacgggttctaacttactaatataaaggcccaataatttaagcctaatattt 38583590  T
Q  278 tattatctaaca 289  Q
    ||||||||||||    
T  38583591 tattatctaaca 38583602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 292
Target Start/End: Original strand, 1172740 - 1172878
Alignment:
Q  153 gacggctagggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtactataacttactgatataaag 252  Q
    ||||| |||||||||||| ||||  ||||  |  |||| | |||||||||| ||||||||||||||||| |  |||| ||| ||| ||| | |||| |||    
T  1172740 gacggttagggtttcatagaatactaatagatcaatattataaaatgttatgagagaatatataataaatcg-aatggactctaatttattaatattaag 1172838  T
Q  253 gttcaatagcttaagcgcaatactttattatctaacacat 292  Q
    |   ||||| |||||  |||||||||||||||||||||||    
T  1172839 gcctaatagtttaagtacaatactttattatctaacacat 1172878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 38588212 - 38588261
Alignment:
Q  192 acaaaatgttataagagaatatataataaaacctaatgtactataactta 241  Q
    |||||| ||||||||| |||||||||||||||||||  |||| |||||||    
T  38588212 acaaaaggttataagaaaatatataataaaacctaacctactctaactta 38588261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 97 - 289
Target Start/End: Complemental strand, 11377 - 11187
Alignment:
Q  97 ataccatgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaa 196  Q
    |||| |||||||||||| ||||||||||||||||||||||  |||  | ||||||| |||||||| |||||||||||||||||||  || | || |||||    
T  11377 atacaatgttaacaatatagatacaaaatagagaaagaga--ataaaaacaacaaatacggctagagtttcataaaatatcaatagtttaacattacaaa 11280  T
Q  197 atgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    | |||||||||||||||| |||||||| ||||| ||| ||||||||| |||||  || |||||| || |||| ||||| ||||||||||||||    
T  11279 aggttataagagaatatacaataaaacttaatgcactttaacttactaatatattggctcaataactgaagcccaatagtttattatctaaca 11187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 97 - 289
Target Start/End: Original strand, 18792764 - 18792954
Alignment:
Q  97 ataccatgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaa 196  Q
    |||| |||||||||||| ||||||||||||||||||||||  |||  | ||||||| |||||||| |||||||||||||||||||  || | || |||||    
T  18792764 atacaatgttaacaatatagatacaaaatagagaaagaga--ataaaaacaacaaatacggctagagtttcataaaatatcaatagtttaacattacaaa 18792861  T
Q  197 atgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    | |||||||||||||||| |||||||| ||||| ||| ||||||||| |||||  || |||||| || |||| ||||| ||||||||||||||    
T  18792862 aggttataagagaatatacaataaaacttaatgcactttaacttactaatatattggctcaataactgaagcccaatagtttattatctaaca 18792954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 103 - 288
Target Start/End: Original strand, 33423902 - 33424087
Alignment:
Q  103 tgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgtta 202  Q
    ||||||||||| |||||||||||||||||||||||||    | ||| |||||||||||||||||| || |||| ||||| ||  | || |||||  ||||    
T  33423902 tgttaacaatatagatacaaaatagagaaagagagaacgataacaataaagacggctagggtttcgtagaataacaatagctcaacattacaaagggtta 33424001  T
Q  203 taagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaac 288  Q
    |  |||||||||||||||||||||||| ||| ||||||||| ||||||||   ||||| ||||||| |||||||||||||||||||    
T  33424002 tgggagaatatataataaaacctaatgaactttaacttactaatataaagacgcaataacttaagctcaatactttattatctaac 33424087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 107 - 289
Target Start/End: Complemental strand, 21862869 - 21862689
Alignment:
Q  107 aacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgttataag 206  Q
    |||||||||||||||||||| |||| |||||  |||||| || || |  ||||||||||||||| |||| ||||  ||| |||| |||||  ||||  ||    
T  21862869 aacaatacagatacaaaataaagaacgagag--tatgacaaaaaacggtggctagggtttcatagaataacaattgcttaatattacaaagagttactag 21862772  T
Q  207 agaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    ||||||||||||||||||||||| ||| |||||| || ||||||||   ||||||||||||| ||||||||||||||||||||    
T  21862771 agaatatataataaaacctaatgcactctaacttgctaatataaagacccaatagcttaagctcaatactttattatctaaca 21862689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 122 - 251
Target Start/End: Complemental strand, 22868628 - 22868499
Alignment:
Q  122 aaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatataataaa 221  Q
    ||||||||| ||| |||||| || ||||||||| ||||||||||||||| |||||||||| | | | || |||||| |||||||||||||||||||||||    
T  22868628 aaatagagagagaaagaataggaacaacaaagatggctagggtttcatagaatatcaatagcataacattacaaaaagttataagagaatatataataaa 22868529  T
Q  222 acctaatgtactataacttactgatataaa 251  Q
    |||||||| ||| ||||||||| |||||||    
T  22868528 acctaatggactctaacttactaatataaa 22868499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 10740762 - 10740574
Alignment:
Q  95 tgataccatgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttca-taaaatatcaataacttgatatcac 193  Q
    ||||||||||||||||| ||  ||||||||    ||||||||||||| ||  | ||| |  ||||||||||||| || |||||||||||||| |||| ||    
T  10740762 tgataccatgttaacaaaactcatacaaaa----gaaagagagaataagaatagcaacggaggctagggtttcaatagaatatcaataacttaatattac 10740667  T
Q  194 aaaatgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||||||||| |||||||||||||| |||| ||||| ||| ||| || || ||||||||   ||||| ||||||| ||||| ||||||||||||||    
T  10740666 aaaatgttatgagagaatatataat-aaacgtaatggactctaatttgctaatataaag--acaataacttaagcccaatattttattatctaaca 10740574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 18984632 - 18984497
Alignment:
Q  154 acggctagggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtactataacttactgatataaagg 253  Q
    |||||||||||||||||||||| ||||| | |   || || ||| ||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||    
T  18984632 acggctagggtttcataaaataacaatagcattgcattactaaaggttataagagaatatataataaaacataatgtactctaacttactaatataaagg 18984533  T
Q  254 ttcaatagcttaagcgcaatactttattatctaaca 289  Q
      |||||   ||||| ||||| |||||||| |||||    
T  18984532 cccaataatctaagcccaatattttattatttaaca 18984497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 260
Target Start/End: Original strand, 9290584 - 9290736
Alignment:
Q  103 tgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataa-aatatcaataacttgatatcacaaaatgtt 201  Q
    |||||||||||||||||||||||| ||||||||| ||      ||| || ||||||||||||||||| | |||| ||||    | | || |||||| |||    
T  9290584 tgttaacaatacagatacaaaataaagaaagagataa------caagaatgacggctagggtttcattagaataacaattgtctaacattacaaaaggtt 9290677  T
Q  202 ataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaata 260  Q
    |||||||||||||||||||||||||||| ||| ||||||| | ||||||||| ||||||    
T  9290678 ataagagaatatataataaaacctaatggactctaacttattaatataaaggctcaata 9290736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 289
Target Start/End: Complemental strand, 10741901 - 10741772
Alignment:
Q  160 agggtttca-taaaatatcaataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaa 258  Q
    ||||||||| || |||||||||  ||| |||| |||||||||||| |||||||||||||| ||| |||||| ||| |||||| || ||||||||   |||    
T  10741901 agggtttcaatagaatatcaattgcttaatattacaaaatgttatgagagaatatataat-aaatctaatggactctaactttctaatataaagacccaa 10741803  T
Q  259 tagcttaagcgcaatactttattatctaaca 289  Q
    || ||||||| ||||| ||||||||||||||    
T  10741802 taacttaagcccaatattttattatctaaca 10741772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 13166569 - 13166484
Alignment:
Q  154 acggctagggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtactataactt 240  Q
    |||||||||||||||||||||||||||  ||| | || | |||| ||||| |||||||||||||||| || ||||| ||| ||||||    
T  13166569 acggctagggtttcataaaatatcaatggcttaacatta-aaaaggttatgagagaatatataataacacttaatgaactctaactt 13166484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 9365085 - 9365156
Alignment:
Q  156 ggctagggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatataataaaacctaat 228  Q
    ||||||| |||| || |||||||||||||| | || |||||| |||| |||||||||||| ||||||||||||    
T  9365085 ggctaggatttcctataatatcaataacttaacattacaaaaggttacaagagaatatat-ataaaacctaat 9365156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 9363118 - 9363168
Alignment:
Q  101 catgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaa 151  Q
    ||||||||||||||| ||||||||| | ||||||||||||| || ||||||    
T  9363118 catgttaacaatacaaatacaaaatcgtgaaagagagaataggaacaacaa 9363168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 137
Target Start/End: Complemental strand, 21858233 - 21858191
Alignment:
Q  95 tgataccatgttaacaatacagatacaaaatagagaaagagag 137  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||    
T  21858233 tgataccatgttaactatatagatacaaaataaagaaagagag 21858191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 289
Target Start/End: Complemental strand, 21858072 - 21858039
Alignment:
Q  256 caatagcttaagcgcaatactttattatctaaca 289  Q
    ||||||||||||| ||||||||||||||||||||    
T  21858072 caatagcttaagctcaatactttattatctaaca 21858039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 123 - 287
Target Start/End: Original strand, 11343870 - 11344032
Alignment:
Q  123 aatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcac-aaaatgttataagagaatatataataaa 221  Q
    ||||||||||||||||| ||||  |||||||||||||| |||||||||||| ||||||| ||| | || || |||||||||||||||| |||||||||||    
T  11343870 aatagagaaagagagaacatgaataacaaagacggctaaggtttcataaaa-atcaatagcttaacattacaaaaatgttataagagagtatataataaa 11343968  T
Q  222 acctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaa 287  Q
    || ||||| ||| ||||||||| |||||||    |||||  |||||| ||||||||||||||||||    
T  11343969 acttaatg-actctaacttactaatataaatagccaata-attaagcccaatactttattatctaa 11344032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 103 - 287
Target Start/End: Complemental strand, 24137784 - 24137600
Alignment:
Q  103 tgttaacaatacagatacaaaatagagaaagagaga-atatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgtt 201  Q
    ||||||||| ||| |||||||||||||||||||| | | | ||  ||||| |  ||||||| ||||||| |||||||||  ||| | || ||| || |||    
T  24137784 tgttaacaaaacaaatacaaaatagagaaagagaaagagaggaataacaacggaggctagg-tttcatataatatcaattgcttaacattacagaaggtt 24137686  T
Q  202 ataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaa 287  Q
    |||||||||||||||||||||||||||  ||| |||||||||  | ||||||  ||||| || |||| |||||||||||| |||||    
T  24137685 ataagagaatatataataaaacctaatagactctaacttactagtgtaaaggcccaataactgaagctcaatactttattgtctaa 24137600  T

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Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 140
Target Start/End: Original strand, 28432144 - 28432199
Alignment:
Q  85 aactaggctctgataccatgttaacaatacagatacaaaatagagaaagagagaat 140  Q
    |||| |||||| ||||||| ||||||||| ||||||||||||||||| ||||||||    
T  28432144 aactcggctctcataccatattaacaatatagatacaaaatagagaatgagagaat 28432199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 290
Target Start/End: Original strand, 11320489 - 11320586
Alignment:
Q  192 acaaaatgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaacac 290  Q
    |||||| ||||||||||||||||||||||||  ||||| |||  |||||||| ||||||||   ||||| ||||||   ||||| ||||||||||||||    
T  11320489 acaaaaggttataagagaatatataataaaa-ttaatggactccaacttactaatataaagagccaataacttaagtctaatacattattatctaacac 11320586  T

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Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 287
Target Start/End: Complemental strand, 40784275 - 40784160
Alignment:
Q  172 aatatcaataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtactat-aacttactgatataaaggttcaatagcttaagcgc 270  Q
    ||||||||||| || | ||||||||| |||| |||||| ||||| | ||||| ||||  ||||| |||||| | ||||||||| ||||||| |||||  |    
T  40784275 aatatcaataatttaacatcacaaaaggttacaagagagtatatga-aaaacttaataaactattaacttaataatataaaggctcaatagattaagttc 40784177  T
Q  271 aatactttattatctaa 287  Q
    | |||||||||||||||    
T  40784176 agtactttattatctaa 40784160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 222
Target Start/End: Complemental strand, 6643547 - 6643430
Alignment:
Q  103 tgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgtta 202  Q
    |||||||||||||||||||||||||| || ||||||||   | ||| ||| | ||||||||||||||| |||| | ||| ||| | ||   |||| ||||    
T  6643547 tgttaacaatacagatacaaaatagaaaatgagagaatggaaacaataaa-atggctagggtttcatagaataac-atagcttaacattgtaaaaggtta 6643450  T
Q  203 taagagaatatataataaaa 222  Q
    || |||||||||||||||||    
T  6643449 tatgagaatatataataaaa 6643430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 92 - 286
Target Start/End: Complemental strand, 33199604 - 33199412
Alignment:
Q  92 ctctgataccatgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatc 191  Q
    ||||||||| ||||||| |||||| |||||||||| |||||||||||||  || ||||  ||   ||||| |||||||| || ||||| ||||| | ||     
T  33199604 ctctgatactatgttaataatacaaatacaaaataaagaaagagagaatgagaacaacggag---gctagagtttcatagaacatcaacaacttaacatt 33199508  T
Q  192 acaaaatgttataagagaatatataataaaacctaa-tgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatcta 286  Q
    ||||||  |||||||  ||||||||||||||||||| | |||| | ||||||| ||||||| | |||||| ||||||  |||||||||||||||||    
T  33199507 acaaaagattataaggaaatatataataaaacctaattatactctgacttactaatataaaagctcaataacttaagatcaatactttattatcta 33199412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 249
Target Start/End: Complemental strand, 44374797 - 44374651
Alignment:
Q  102 atgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgtt 201  Q
    |||||| ||| | |||||||||||||||||||||| ||||||| |||||||||||||||   |||||||  ||||||||| ||  | || | ||||  ||    
T  44374797 atgttagcaaaatagatacaaaatagagaaagagataatatgaacaacaaagacggcta-aatttcatagcatatcaatagctaaacattaaaaaagatt 44374699  T
Q  202 ataagagaatatataataaaacctaatgtactataacttactgatata 249  Q
    |||| ||||||||||||||||| ||||  ||| ||||| ||| |||||    
T  44374698 ataaaagaatatataataaaacataatagactctaactcactaatata 44374651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 43615545 - 43615458
Alignment:
Q  202 ataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||||| |||||||||||||| |||||| ||| ||||||||| ||||||| | |||||| || |||  ||||| ||||||||||||||    
T  43615545 ataagaaaatatataataaaatctaatggactctaacttactaatataaaagctcaataactaaagttcaatattttattatctaaca 43615458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 20241154 - 20241071
Alignment:
Q  160 agggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtactataacttact 243  Q
    |||||||||||||||| ||||| | |   || || |||||||||||||||||||||||||||| |||| | ||| |||||||||    
T  20241154 agggtttcataaaataacaatagcattgcattactaaatgttataagagaatatataataaaatctaacggactctaacttact 20241071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 20251913 - 20251996
Alignment:
Q  160 agggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtactataacttact 243  Q
    |||||||||||||||| ||||| | |   || || |||||||||||||||||||||||||||| |||| | ||| |||||||||    
T  20251913 agggtttcataaaataacaatagcattgcattactaaatgttataagagaatatataataaaatctaacggactctaacttact 20251996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 289
Target Start/End: Complemental strand, 20242821 - 20242727
Alignment:
Q  195 aaatgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    ||||||||||| ||||||||||||||||  |||   ||| ||||||||| |||||||||| ||||| |||||   ||||| |||||||| |||||    
T  20242821 aaatgttataacagaatatataataaaatttaaaagactttaacttactaatataaaggtccaataacttaaatccaatattttattatttaaca 20242727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 289
Target Start/End: Original strand, 20250339 - 20250433
Alignment:
Q  195 aaatgttataagagaatatataataaaacctaatgtactataacttactgatataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    ||||||||||| ||||||||||||||||  |||   ||| ||||||||| |||||||||| ||||| |||||   ||||| |||||||| |||||    
T  20250339 aaatgttataacagaatatataataaaatttaaaagactttaacttactaatataaaggtccaataacttaaatccaatattttattatttaaca 20250433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 43516305 - 43516186
Alignment:
Q  107 aacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttc-ataaaatatcaataacttgatatcacaaaatgttataa 205  Q
    ||||||||| |||||||||||||||| |||||||| |   ||||| ||||||||||||||| ||| |||| || || ||| | || ||| || ||||  |    
T  43516305 aacaatacatatacaaaatagagaaacagagaatagg---aacaatgacggctagggtttcaatagaataccattagcttaacattacataaggttacta 43516209  T
Q  206 gagaatatataataaaacctaatg 229  Q
    |||||||||| |||||||||||||    
T  43516208 gagaatatat-ataaaacctaatg 43516186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 292
Target Start/End: Original strand, 16578749 - 16578896
Alignment:
Q  147 aacaaagacggctagggtttca-taaaatatcaata-acttgatatcacaaaatgttataagagaatatataataaaacctaatgtacta-taacttact 243  Q
    |||||||||| ||||||||||| ||||||| ||||| |   || || |||||| |||| || |||||||||| ||||| |||||| |||  ||||||| |    
T  16578749 aacaaagacgactagggtttcaataaaatagcaatataaaagacattacaaaaggttacaatagaatatata-taaaatctaatggactgctaacttagt 16578847  T
Q  244 gatataaaggttcaatagcttaagcgcaatactttattatctaacacat 292  Q
     ||||||||||||||| | | |||   ||||||||||||||||||||||    
T  16578848 aatataaaggttcaatggttgaagattaatactttattatctaacacat 16578896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 188
Target Start/End: Original strand, 14699336 - 14699422
Alignment:
Q  102 atgttaacaatacagatacaaaatagagaaagagagaatatgaccaacaaagacggctagggtttcataaaatatcaataacttgat 188  Q
    |||||||  ||||| ||||||||||||||||||||||||| || ||| || |   | |||||||| ||||||||| |||| ||||||    
T  14699336 atgttaatgatacaaatacaaaatagagaaagagagaataggaacaataatgtaagttagggttttataaaatattaatatcttgat 14699422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 148 - 289
Target Start/End: Original strand, 406215 - 406356
Alignment:
Q  148 acaaagacggctagggtttcataaaatatcaataacttgatatcacaaaatgttataagagaatatataataaaacctaatgtactataacttactgata 247  Q
    ||||||| ||||||| ||| |  || || ||||||||| |||| | |||| ||||||| ||||||||||||||||| ||| | ||| |||||| || |||    
T  406215 acaaagatggctaggatttaaataattaacaataacttaatattagaaaaggttataatagaatatataataaaacttaaaggactctaacttgctaata 406314  T
Q  248 taaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    ||||||  ||||| ||||| |  |||||||||||||||||||    
T  406315 taaaggcccaataacttaaacctaatactttattatctaaca 406356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 290
Target Start/End: Original strand, 14540 - 14639
Alignment:
Q  192 acaaaatgttataagagaatatataataaaacctaatgtactat-aacttactgat-ataaaggttcaatagcttaagcgcaatactttattatctaaca 289  Q
    |||||| |||||||||||||||||| ||||||||||   ||||| |||||| | || |||||||  ||||||||||||| ||||||||||||||||||||    
T  14540 acaaaaggttataagagaatatata-taaaacctaacagactatgaacttagtaatgataaaggcccaatagcttaagcccaatactttattatctaaca 14638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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