View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10775_low_10 (Length: 250)

Name: NF10775_low_10
Description: NF10775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10775_low_10
NF10775_low_10
[»] chr3 (24 HSPs)
chr3 (51-139)||(33972752-33972840)
chr3 (148-235)||(33972710-33972797)
chr3 (94-141)||(24085354-24085401)
chr3 (94-139)||(35696245-35696290)
chr3 (94-141)||(21367674-21367721)
chr3 (94-139)||(901931-901976)
chr3 (94-139)||(30443900-30443945)
chr3 (94-139)||(39980736-39980781)
chr3 (94-143)||(41633367-41633416)
chr3 (94-142)||(2719475-2719523)
chr3 (1-33)||(33972858-33972890)
chr3 (94-141)||(402558-402605)
chr3 (95-142)||(25185993-25186040)
chr3 (94-141)||(50600194-50600241)
chr3 (101-143)||(50946300-50946342)
chr3 (94-139)||(3845580-3845625)
chr3 (94-139)||(20880483-20880528)
chr3 (94-139)||(32582751-32582796)
chr3 (101-142)||(33883765-33883806)
chr3 (94-139)||(36631069-36631114)
chr3 (94-139)||(47132338-47132383)
chr3 (94-142)||(37273141-37273189)
chr3 (141-193)||(41633360-41633412)
chr3 (94-138)||(44747427-44747471)
[»] scaffold0147 (1 HSPs)
scaffold0147 (95-142)||(23639-23686)
[»] chr8 (21 HSPs)
chr8 (142-209)||(11795093-11795160)
chr8 (94-141)||(43504758-43504805)
chr8 (94-141)||(1930042-1930089)
chr8 (94-141)||(20672757-20672804)
chr8 (94-141)||(38602340-38602387)
chr8 (94-140)||(9956831-9956877)
chr8 (97-139)||(18133666-18133708)
chr8 (95-137)||(27754412-27754454)
chr8 (143-209)||(35220725-35220791)
chr8 (94-139)||(6864477-6864522)
chr8 (144-209)||(20672753-20672818)
chr8 (94-139)||(25930572-25930617)
chr8 (94-139)||(27028838-27028883)
chr8 (94-131)||(30657798-30657835)
chr8 (147-216)||(38874652-38874721)
chr8 (94-139)||(38874653-38874698)
chr8 (94-139)||(44236841-44236886)
chr8 (110-142)||(8499311-8499343)
chr8 (103-131)||(10358594-10358622)
chr8 (142-202)||(27028832-27028892)
chr8 (94-142)||(28769354-28769402)
[»] chr4 (17 HSPs)
chr4 (95-141)||(825506-825552)
chr4 (148-208)||(11802541-11802601)
chr4 (94-142)||(42685431-42685479)
chr4 (96-139)||(26882-26925)
chr4 (100-142)||(2592324-2592366)
chr4 (142-216)||(53673653-53673727)
chr4 (148-209)||(2996580-2996641)
chr4 (94-131)||(9760447-9760484)
chr4 (94-139)||(17822883-17822928)
chr4 (94-139)||(50662756-50662801)
chr4 (101-138)||(52315216-52315253)
chr4 (94-142)||(17884075-17884123)
chr4 (94-142)||(17975384-17975432)
chr4 (95-139)||(20031757-20031801)
chr4 (94-138)||(35571650-35571694)
chr4 (94-138)||(42121495-42121539)
chr4 (94-142)||(53673673-53673721)
[»] chr5 (21 HSPs)
chr5 (97-142)||(1465035-1465080)
chr5 (94-141)||(4014440-4014487)
chr5 (94-141)||(7674655-7674702)
chr5 (97-139)||(12857723-12857765)
chr5 (94-142)||(7319023-7319071)
chr5 (94-138)||(17560433-17560477)
chr5 (94-138)||(43300885-43300929)
chr5 (94-141)||(6587123-6587170)
chr5 (94-141)||(42582919-42582966)
chr5 (101-139)||(7706016-7706054)
chr5 (148-209)||(5284450-5284511)
chr5 (96-141)||(7984978-7985023)
chr5 (94-139)||(16457997-16458042)
chr5 (94-139)||(16937901-16937946)
chr5 (94-139)||(37954693-37954738)
chr5 (94-139)||(39105471-39105516)
chr5 (148-213)||(40205072-40205137)
chr5 (142-210)||(8651354-8651421)
chr5 (94-142)||(11707062-11707110)
chr5 (94-142)||(12425578-12425626)
chr5 (170-202)||(32897486-32897518)
[»] chr2 (33 HSPs)
chr2 (94-139)||(43279547-43279592)
chr2 (94-142)||(42621390-42621438)
chr2 (96-139)||(12464491-12464534)
chr2 (96-141)||(680512-680557)
chr2 (94-143)||(3227697-3227746)
chr2 (94-143)||(15977992-15978041)
chr2 (94-143)||(44590041-44590090)
chr2 (103-139)||(1893299-1893335)
chr2 (94-134)||(6167306-6167346)
chr2 (94-142)||(35379031-35379079)
chr2 (94-141)||(16353868-16353915)
chr2 (102-141)||(16451133-16451172)
chr2 (94-133)||(27695619-27695658)
chr2 (94-141)||(40279274-40279321)
chr2 (94-141)||(40279344-40279391)
chr2 (94-141)||(40279414-40279461)
chr2 (94-140)||(5426081-5426127)
chr2 (96-142)||(7928314-7928360)
chr2 (94-139)||(12194959-12195004)
chr2 (96-141)||(16398123-16398168)
chr2 (94-139)||(20952362-20952407)
chr2 (94-139)||(26143658-26143703)
chr2 (94-139)||(26202035-26202080)
chr2 (94-139)||(33319830-33319875)
chr2 (96-137)||(39073709-39073750)
chr2 (94-139)||(40279204-40279249)
chr2 (142-187)||(42409327-42409372)
chr2 (94-139)||(45229518-45229563)
chr2 (145-209)||(1939334-1939398)
chr2 (94-142)||(3078655-3078703)
chr2 (94-142)||(8017441-8017489)
chr2 (96-140)||(10646306-10646350)
chr2 (94-138)||(33931589-33931633)
[»] chr1 (33 HSPs)
chr1 (97-142)||(15784339-15784384)
chr1 (93-139)||(5709633-5709679)
chr1 (93-142)||(3224429-3224478)
chr1 (94-139)||(7137016-7137061)
chr1 (94-139)||(27820355-27820400)
chr1 (94-139)||(37631577-37631622)
chr1 (94-142)||(12564514-12564562)
chr1 (94-142)||(34290243-34290291)
chr1 (94-142)||(38503480-38503528)
chr1 (94-141)||(35179146-35179193)
chr1 (94-141)||(45975697-45975744)
chr1 (94-132)||(3234040-3234078)
chr1 (96-142)||(10199423-10199469)
chr1 (94-132)||(17603409-17603447)
chr1 (94-139)||(1509758-1509803)
chr1 (104-141)||(10809362-10809399)
chr1 (93-142)||(14443455-14443504)
chr1 (94-139)||(24915069-24915114)
chr1 (94-139)||(28837368-28837413)
chr1 (142-203)||(35179140-35179201)
chr1 (94-139)||(39603849-39603894)
chr1 (94-139)||(41195211-41195256)
chr1 (94-139)||(49938754-49938799)
chr1 (94-139)||(51695513-51695558)
chr1 (101-141)||(2462966-2463006)
chr1 (94-142)||(4700081-4700129)
chr1 (94-142)||(5887009-5887057)
chr1 (101-141)||(7472325-7472365)
chr1 (94-134)||(13810005-13810045)
chr1 (95-139)||(19389909-19389953)
chr1 (94-142)||(27140485-27140533)
chr1 (101-141)||(37593700-37593740)
chr1 (99-139)||(51190860-51190900)
[»] chr7 (16 HSPs)
chr7 (94-140)||(47130802-47130848)
chr7 (94-143)||(9038119-9038168)
chr7 (94-139)||(9050642-9050687)
chr7 (94-143)||(25670600-25670649)
chr7 (94-139)||(46280290-46280335)
chr7 (94-142)||(7244687-7244735)
chr7 (94-142)||(19022600-19022648)
chr7 (94-141)||(20526453-20526500)
chr7 (94-141)||(33678787-33678834)
chr7 (170-213)||(45901182-45901225)
chr7 (144-193)||(7244683-7244732)
chr7 (102-143)||(28128409-28128450)
chr7 (172-209)||(44808189-44808226)
chr7 (94-139)||(45790443-45790488)
chr7 (94-138)||(14768130-14768174)
chr7 (94-142)||(47559616-47559664)
[»] chr6 (8 HSPs)
chr6 (95-141)||(835265-835311)
chr6 (142-209)||(4246411-4246478)
chr6 (102-141)||(31624957-31624996)
chr6 (137-187)||(33089502-33089552)
chr6 (93-139)||(34430479-34430525)
chr6 (100-141)||(12628355-12628396)
chr6 (95-139)||(837234-837278)
chr6 (94-142)||(2455266-2455314)


Alignment Details
Target: chr3 (Bit Score: 89; Significance: 5e-43; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 51 - 139
Target Start/End: Complemental strand, 33972840 - 33972752
Alignment:
Q  51 gcttatttgtagcttataccgataagcgcttatgtatgccttgtgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33972840 gcttatttgtagcttataccgataagcgcttatgtatgccttgtgtttttataagctattttggagaacttgtgaaaataagctgaaaa 33972752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 33972797 - 33972710
Alignment:
Q  148 tgttttcataagctgttatggggagcttatgaaaataagcagaaaaaaggttatggacatgttatatgtaagttgtttccacaggtgc 235  Q
    |||||| ||||||| || ||| || ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33972797 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaaaggttatggacatgttatatgtaagttgtttccacaggtgc 33972710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 24085401 - 24085354
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||    
T  24085401 tgtttttgtaagctatcttggagaacttgtgaaaataagctgaaaaca 24085354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 35696245 - 35696290
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||    
T  35696245 tgtttttataagctatattggagaacttgtgaaaataagttgaaaa 35696290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 21367674 - 21367721
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  21367674 tgttttcataagctatcttggagaacttatgaaaataagctgaaaaca 21367721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 901931 - 901976
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||    
T  901931 tgtttttataagctatattggagaacttatgaaaataagttgaaaa 901976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 30443900 - 30443945
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||||    
T  30443900 tgtttttataaactatattggagaacttatgaaaataagctgaaaa 30443945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 39980736 - 39980781
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||    
T  39980736 tgtttttataagctatattggagaacttatgaaaataagttgaaaa 39980781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 41633367 - 41633416
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaat 143  Q
    |||||| || |||||||||||||| ||| |||||||||||||||||||||    
T  41633367 tgttttcatcagctattttggagagcttatgaaaataagctgaaaacaat 41633416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 2719475 - 2719523
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| ||||||||| ||||||||||| |||||||||||||| |||||    
T  2719475 tgttttcataagctatcttggagaacttatgaaaataagctgagaacaa 2719523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 33972890 - 33972858
Alignment:
Q  1 tttcctcattcccatgctgttcgttggtaaggt 33  Q
    |||||||||||||||||||||||||||||||||    
T  33972890 tttcctcattcccatgctgttcgttggtaaggt 33972858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 402605 - 402558
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    ||||||||||| |||| ||| ||||||||||||| |||||||||||||    
T  402605 tgtttttataatctatcttgaagaacttgtgaaattaagctgaaaaca 402558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 25185993 - 25186040
Alignment:
Q  95 gtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    ||||||||||||||| ||||| | |||||||||||||| |||||||||    
T  25185993 gtttttataagctatcttggaaatcttgtgaaaataagatgaaaacaa 25186040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 50600241 - 50600194
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||| || |||||| ||||||||||| |||||||||||||||||||    
T  50600241 tgttttcatcagctatattggagaacttatgaaaataagctgaaaaca 50600194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 143
Target Start/End: Complemental strand, 50946342 - 50946300
Alignment:
Q  101 ataagctattttggagaacttgtgaaaataagctgaaaacaat 143  Q
    |||| |||||||||||||||| |||||||||||||| ||||||    
T  50946342 ataaactattttggagaacttatgaaaataagctgagaacaat 50946300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 3845625 - 3845580
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| ||||| ||| ||||||||||| |||||||||||||||||    
T  3845625 tgttttcataagttatcttggagaacttatgaaaataagctgaaaa 3845580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 20880483 - 20880528
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||| ||||||| ||||||||||| |||||||||||| ||||    
T  20880483 tgtttttaaaagctatattggagaacttatgaaaataagctcaaaa 20880528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 32582751 - 32582796
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| ||||||||||||||||||||| || ||||||| ||||||    
T  32582751 tgttttcataagctattttggagaacttatggaaataagttgaaaa 32582796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 142
Target Start/End: Complemental strand, 33883806 - 33883765
Alignment:
Q  101 ataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    ||||||||| || |||||||| ||||||||||||||||||||    
T  33883806 ataagctatcttagagaacttatgaaaataagctgaaaacaa 33883765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 36631114 - 36631069
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||||||| |||||| ||||||||||| ||||||||||| |||||    
T  36631114 tgtttttatgagctatattggagaacttatgaaaataagcagaaaa 36631069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 47132338 - 47132383
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||||||||| |||||||| || |||||||||| ||||||    
T  47132338 tgtttttataagctatattggagaagttatgaaaataagttgaaaa 47132383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 37273141 - 37273189
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| ||||||||| ||||||||||| || ||||||| |||||||||    
T  37273141 tgttttcataagctatcttggagaacttatggaaataagttgaaaacaa 37273189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 41633360 - 41633412
Alignment:
Q  141 aataaactgttttcataagctgttatggggagcttatgaaaataagcagaaaa 193  Q
    ||||| |||||||||| |||| || ||| |||||||||||||||||| |||||    
T  41633360 aataagctgttttcatcagctattttggagagcttatgaaaataagctgaaaa 41633412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 44747471 - 44747427
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaa 138  Q
    |||||| ||||||||| ||||| ||||| ||||||||||||||||    
T  44747471 tgttttcataagctatcttggaaaacttatgaaaataagctgaaa 44747427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 23639 - 23686
Alignment:
Q  95 gtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||    
T  23639 gtttttataagctatattggagaacttgtgaaaataagttgaaaacaa 23686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 11795093 - 11795160
Alignment:
Q  142 ataaactgttttcataagctgttatggggagcttatgaaaataagcagaaaaaaggttatggacatgt 209  Q
    |||| ||| ||||||||||| |||||| ||||||||| |||||||| ||||| |||||||||||||||    
T  11795093 ataagctgatttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatgt 11795160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 43504758 - 43504805
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||||||||||||| ||||||||||| || ||||||||||||||||    
T  43504758 tgtttttataagctatcttggagaacttatggaaataagctgaaaaca 43504805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 1930042 - 1930089
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||| ||||||||| |||| || |||||||||||||||||||||||    
T  1930042 tgttttcataagctatcttggtgaccttgtgaaaataagctgaaaaca 1930089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 20672757 - 20672804
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    ||||||||||||||||  |||||| ||| |||||||||||||||||||    
T  20672757 tgtttttataagctatcctggagagcttatgaaaataagctgaaaaca 20672804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 38602340 - 38602387
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    ||||||||||||||||  ||||||| |||||||||||||| |||||||    
T  38602340 tgtttttataagctatactggagaatttgtgaaaataagccgaaaaca 38602387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 9956877 - 9956831
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaac 140  Q
    |||||| |||| |||| ||||||||||| ||||||||||||||||||    
T  9956877 tgttttcataatctatcttggagaacttatgaaaataagctgaaaac 9956831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 18133666 - 18133708
Alignment:
Q  97 ttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||| |||| ||||||||||| |||||||||||||||||    
T  18133666 ttttataaactatattggagaacttatgaaaataagctgaaaa 18133708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 137
Target Start/End: Original strand, 27754412 - 27754454
Alignment:
Q  95 gtttttataagctattttggagaacttgtgaaaataagctgaa 137  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||    
T  27754412 gttttcataagctattttggagagcttatgaaaataagctgaa 27754454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 35220791 - 35220725
Alignment:
Q  143 taaactgttttcataagctgttatggggagcttatgaaaataagcagaaaaaaggttatggacatgt 209  Q
    ||||||||||||||||||| || ||| |||||||| |||||||||  |||| || |||||| |||||    
T  35220791 taaactgttttcataagctattctggagagcttataaaaataagctaaaaatagcttatgggcatgt 35220725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 6864522 - 6864477
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| ||||||||||||||||| |||| | ||||||||||||||    
T  6864522 tgttttcataagctattttggagagcttgaggaaataagctgaaaa 6864477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 20672753 - 20672818
Alignment:
Q  144 aaactgttttcataagctgttatggggagcttatgaaaataagcagaaaaaaggttatggacatgt 209  Q
    |||||||||| ||||||| |  ||| |||||||||||||||||| ||||| || ||||| ||||||    
T  20672753 aaactgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgt 20672818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 25930617 - 25930572
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| ||||||||| ||||||||||||||| | |||||||||||    
T  25930617 tgttttcataagctatcttggagaacttgtgatagtaagctgaaaa 25930572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 27028838 - 27028883
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| ||||||||| ||||||| ||| |||||||||||||||||    
T  27028838 tgttttcataagctatcttggagagcttatgaaaataagctgaaaa 27028883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 30657835 - 30657798
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataa 131  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  30657835 tgtttttataagctatattggagaacttatgaaaataa 30657798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 38874652 - 38874721
Alignment:
Q  147 ctgttttcataagctgttatggggagcttatgaaaataagcagaaaaaaggttatggacatgttatatgt 216  Q
    ||||||||||||||| || ||| || | |||||||||||||  |||| || |||||||| ||||||||||    
T  38874652 ctgttttcataagctattttggagaacatatgaaaataagctaaaaatagcttatggacgtgttatatgt 38874721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 38874653 - 38874698
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| ||||||||||||||||||| | |||||||||||| ||||    
T  38874653 tgttttcataagctattttggagaacatatgaaaataagctaaaaa 38874698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 44236886 - 44236841
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| ||||||||| ||||||| ||| |||||||||||||||||    
T  44236886 tgttttcataagctatattggagagcttatgaaaataagctgaaaa 44236841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 8499311 - 8499343
Alignment:
Q  110 tttggagaacttgtgaaaataagctgaaaacaa 142  Q
    ||||||||| |||||||||||||||||||||||    
T  8499311 tttggagaaattgtgaaaataagctgaaaacaa 8499343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 10358594 - 10358622
Alignment:
Q  103 aagctattttggagaacttgtgaaaataa 131  Q
    |||||||||||||||||||||||||||||    
T  10358594 aagctattttggagaacttgtgaaaataa 10358622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 27028832 - 27028892
Alignment:
Q  142 ataaactgttttcataagctgttatggggagcttatgaaaataagcagaaaaaaggttatg 202  Q
    |||| ||||||||||||||| |  ||| |||||||||||||||||| ||||| || |||||    
T  27028832 ataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatg 27028892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 28769402 - 28769354
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| |||||||||||||||||  || || |||||||||||||||||    
T  28769402 tgttttcataagctattttggagagtttatggaaataagctgaaaacaa 28769354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 141
Target Start/End: Complemental strand, 825552 - 825506
Alignment:
Q  95 gtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  825552 gttttcataagctattttggagaacttatgaaaataagctgaaaaca 825506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 11802541 - 11802601
Alignment:
Q  148 tgttttcataagctgttatggggagcttatgaaaataagcagaaaaaaggttatggacatg 208  Q
    |||||||||||||| |||||| |||||||||| ||||||| ||||| || |||||| ||||    
T  11802541 tgttttcataagctattatggagagcttatgagaataagctgaaaacagcttatggccatg 11802601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 42685431 - 42685479
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| ||||||||||||||||||| |||||||||||||  |||||||    
T  42685431 tgttttcataagctattttggagaacgtgtgaaaataagccaaaaacaa 42685479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 26925 - 26882
Alignment:
Q  96 tttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||    
T  26925 tttttataagctatattggagaacttatgaaaataatctgaaaa 26882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 142
Target Start/End: Complemental strand, 2592366 - 2592324
Alignment:
Q  100 tataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||||||||||||||| ||| || |||||||||||||||||    
T  2592366 tataagctattttggagagcttatggaaataagctgaaaacaa 2592324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 53673727 - 53673653
Alignment:
Q  142 ataaactgttttcataagctgttatggggagcttatgaaaataagcagaaaaaaggttatggacatgttatatgt 216  Q
    |||||||||||||||||||| |  ||| ||||||||| |||||||| ||||| |  |||||||||| | ||||||    
T  53673727 ataaactgttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatggacatatgatatgt 53673653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 2996580 - 2996641
Alignment:
Q  148 tgttttcataagctgttatggggagcttatgaaaataagcagaaaaaaggttatggacatgt 209  Q
    |||||||||||||| |  ||| |||| ||||||||||||  |||||||| ||||||||||||    
T  2996580 tgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgt 2996641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 9760447 - 9760484
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataa 131  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  9760447 tgtttttataagctatattggagaacttatgaaaataa 9760484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 17822928 - 17822883
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| ||||||||| ||||||||||| |||||||||||| ||||    
T  17822928 tgttttcataagctatcttggagaacttatgaaaataagctaaaaa 17822883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 50662801 - 50662756
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||| |||||||||| |||||||| ||||||||||||| ||||||    
T  50662801 tgtttatataagctatattggagaaattgtgaaaataagttgaaaa 50662756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 52315253 - 52315216
Alignment:
Q  101 ataagctattttggagaacttgtgaaaataagctgaaa 138  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  52315253 ataagctattttggaaaacttatgaaaataagctgaaa 52315216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 17884075 - 17884123
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| ||||||||| ||||||| ||| ||||||| ||||||||||||    
T  17884075 tgttttcataagctatattggagagcttatgaaaattagctgaaaacaa 17884123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 17975432 - 17975384
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||||||||||||| ||||||| ||| || ||||||||| |||||||    
T  17975432 tgtttttataagctatcttggagagcttctggaaataagctaaaaacaa 17975384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 20031757 - 20031801
Alignment:
Q  95 gtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||| |||||||||||| |||||||| ||||||| |||||||||    
T  20031757 gttttcataagctattttagagaacttatgaaaatgagctgaaaa 20031801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 35571694 - 35571650
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaa 138  Q
    |||||| ||||||||| || ||||||||||||||||||| |||||    
T  35571694 tgttttcataagctatcttagagaacttgtgaaaataagttgaaa 35571650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 42121495 - 42121539
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaa 138  Q
    |||||| || |||||| |||||||||||||| |||||||||||||    
T  42121495 tgttttcatgagctatcttggagaacttgtggaaataagctgaaa 42121539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 53673721 - 53673673
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| ||||||||| ||||||| ||| || |||||||||||||||||    
T  53673721 tgttttcataagctatcttggagagcttatgtaaataagctgaaaacaa 53673673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 1465080 - 1465035
Alignment:
Q  97 ttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||    
T  1465080 ttttataagctatcttggaggacttgtgaaaataagctgaaaacaa 1465035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 4014487 - 4014440
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  4014487 tgttttcataagctatcttggagaacttatgaaaataagctgaaaaca 4014440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 7674655 - 7674702
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  7674655 tgttttcataagctatcttggagaatttgtgaaaataagctgaaaaca 7674702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 12857765 - 12857723
Alignment:
Q  97 ttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  12857765 ttttataagctatattggagaacttatgaaaataagctgaaaa 12857723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 7319071 - 7319023
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| ||||||||| ||||||||||| |||||||||||||| |||||    
T  7319071 tgttttcataagctatcttggagaacttatgaaaataagctgagaacaa 7319023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 17560477 - 17560433
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaa 138  Q
    |||||||||||| ||| || |||||||||||||||||||||||||    
T  17560477 tgtttttataagttatcttcgagaacttgtgaaaataagctgaaa 17560433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 43300885 - 43300929
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaa 138  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||    
T  43300885 tgtttttgtaagctatcttggagaacttatgaaaataagctgaaa 43300929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 6587170 - 6587123
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||| |||||||||  |||||||||||||||||||||||| |||||    
T  6587170 tgttttcataagctatagtggagaacttgtgaaaataagctgtaaaca 6587123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 42582919 - 42582966
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    ||||||| |||||||| ||||||||||| |||||||||||| ||||||    
T  42582919 tgtttttgtaagctatattggagaacttatgaaaataagctcaaaaca 42582966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 7706054 - 7706016
Alignment:
Q  101 ataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  7706054 ataagctatattggagaacttgtgaaaataagccgaaaa 7706016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 5284511 - 5284450
Alignment:
Q  148 tgttttcataagctgttatggggagcttatgaaaataagcagaaaaaaggttatggacatgt 209  Q
    |||||||||| ||| | |||  ||||| |||||||||||| |||||||| ||||||||||||    
T  5284511 tgttttcataggctatcatgaagagctaatgaaaataagctgaaaaaagcttatggacatgt 5284450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 7984978 - 7985023
Alignment:
Q  96 tttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||| ||||||||| |||||||| || |||||||||||||||||||    
T  7984978 ttttcataagctatcttggagaatttatgaaaataagctgaaaaca 7985023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 16458042 - 16457997
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||||||| |||||  ||||||||||||||||||||| |||||||    
T  16458042 tgtttttatgagctaaattggagaacttgtgaaaataaactgaaaa 16457997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 16937946 - 16937901
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||| ||||| |||||||||||  ||||||||||||||||    
T  16937946 tgtttttatacgctatattggagaacttaggaaaataagctgaaaa 16937901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 37954693 - 37954738
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||||||||| ||||||||| | |||||||||| ||||||    
T  37954693 tgtttttataagctatattggagaacatatgaaaataagttgaaaa 37954738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 39105471 - 39105516
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| ||||||||| ||||||||||| |||||||||||| ||||    
T  39105471 tgttttcataagctatcttggagaacttatgaaaataagctaaaaa 39105516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 40205137 - 40205072
Alignment:
Q  148 tgttttcataagctgttatggggagcttatgaaaataagcagaaaaaaggttatggacatgttata 213  Q
    |||||||||||||| |  ||| ||||||||  |||||||| ||||| || ||||||||||||||||    
T  40205137 tgttttcataagctatcctggagagcttatagaaataagctgaaaacagattatggacatgttata 40205072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 8651421 - 8651354
Alignment:
Q  142 ataaactgttttcataagctgttatggggagcttatgaaaataagcagaaaaaaggttatggacatgtt 210  Q
    |||||||||||||||||||| || | ||||||||||| ||||| || ||||| |  |||||||||||||    
T  8651421 ataaactgttttcataagctattct-gggagcttatggaaatatgctgaaaacaacttatggacatgtt 8651354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 11707062 - 11707110
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| ||||||||| ||| ||| ||| ||||||||||||||||||||    
T  11707062 tgttttcataagctatcttgtagagcttttgaaaataagctgaaaacaa 11707110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 12425578 - 12425626
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| | ||||||| ||||||||||| |||||||||| |||||||||    
T  12425578 tgttttcacaagctatcttggagaacttatgaaaataagttgaaaacaa 12425626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 32897486 - 32897518
Alignment:
Q  170 gagcttatgaaaataagcagaaaaaaggttatg 202  Q
    |||||||||||||||||||||||| ||||||||    
T  32897486 gagcttatgaaaataagcagaaaacaggttatg 32897518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 43279592 - 43279547
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||    
T  43279592 tgtttttataagctatattggagaacttgtgaaaataagttgaaaa 43279547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 42621438 - 42621390
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  42621438 tgttttcataagttattctggagaacttgtgaaaataagctgaaaacaa 42621390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 12464534 - 12464491
Alignment:
Q  96 tttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  12464534 ttttcataagctatcttggagaacttgtgaaaataagctgaaaa 12464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 680512 - 680557
Alignment:
Q  96 tttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||| ||||||||| ||| |||||||||||||||||||||||||||    
T  680512 ttttcataagctatcttgaagaacttgtgaaaataagctgaaaaca 680557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 3227746 - 3227697
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaat 143  Q
    |||||| |||||||||||||||||  || |||||||||||||||||||||    
T  3227746 tgttttcataagctattttggagagattttgaaaataagctgaaaacaat 3227697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 15977992 - 15978041
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaat 143  Q
    |||||| |||||||||||||||||  || |||||||||||||||||||||    
T  15977992 tgttttcataagctattttggagagattatgaaaataagctgaaaacaat 15978041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 44590041 - 44590090
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaat 143  Q
    |||||| ||||||||| ||| ||||||||||| |||||||||||||||||    
T  44590041 tgttttcataagctatcttgaagaacttgtgagaataagctgaaaacaat 44590090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 1893335 - 1893299
Alignment:
Q  103 aagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||||| |||||||||||||||||||||||||||||    
T  1893335 aagctatcttggagaacttgtgaaaataagctgaaaa 1893299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 6167346 - 6167306
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagct 134  Q
    |||||||||||||||||||||||||||| || |||||||||    
T  6167346 tgtttttataagctattttggagaacttatggaaataagct 6167306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 35379079 - 35379031
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| ||||||||| ||||||| ||| ||||||||||||||||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaa 35379031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 16353868 - 16353915
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||||||||||||| ||||||| |||||||||||||  ||||||||    
T  16353868 tgtttttataagctatcttggagatcttgtgaaaataaagtgaaaaca 16353915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 141
Target Start/End: Original strand, 16451133 - 16451172
Alignment:
Q  102 taagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  16451133 taagctatcttggagaactcgtgaaaataagctgaaaaca 16451172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 27695658 - 27695619
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagc 133  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  27695658 tgtttttataagctatattggggaacttgtgaaaataagc 27695619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 40279274 - 40279321
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||| ||||||||| ||||||||||| ||||||| |||||||||||    
T  40279274 tgttttcataagctatattggagaacttatgaaaattagctgaaaaca 40279321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 40279344 - 40279391
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||| ||||||||| ||||||||||| ||||||| |||||||||||    
T  40279344 tgttttcataagctatattggagaacttatgaaaattagctgaaaaca 40279391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 40279414 - 40279461
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||| ||||||||| ||||||||||| |||||||||| ||||||||    
T  40279414 tgttttcataagctatattggagaacttatgaaaataagttgaaaaca 40279461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 5426081 - 5426127
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaac 140  Q
    |||||| | |||||||| ||||| |||||||||||||||||||||||    
T  5426081 tgttttcacaagctattctggaggacttgtgaaaataagctgaaaac 5426127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Complemental strand, 7928360 - 7928314
Alignment:
Q  96 tttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| | ||||| ||||||||||| ||||||||||||||||||||    
T  7928360 tttttacaggctatcttggagaacttatgaaaataagctgaaaacaa 7928314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 12194959 - 12195004
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||| |||||| ||| |||||||||||||||||||||| ||||||    
T  12194959 tgtttatataagttatattggagaacttgtgaaaataagttgaaaa 12195004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 16398123 - 16398168
Alignment:
Q  96 tttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||| ||||| ||| ||||||||||| |||||||||||||||||||    
T  16398123 ttttcataagttatgttggagaacttatgaaaataagctgaaaaca 16398168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 20952362 - 20952407
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||||||| |||||| ||||||||||| |||||||||| ||||||    
T  20952362 tgtttttattagctatattggagaacttatgaaaataagttgaaaa 20952407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 26143703 - 26143658
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| ||||||||  ||||||||||| |||||||||||||||||    
T  26143703 tgttttcataagctaacttggagaacttatgaaaataagctgaaaa 26143658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 26202035 - 26202080
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||||| ||| ||||||||||| |||||||||| ||||||    
T  26202035 tgtttttataagatatattggagaacttatgaaaataagttgaaaa 26202080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 33319875 - 33319830
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| |||| |||| ||||||||||| |||||||||||||||||    
T  33319875 tgttttcataaactatcttggagaacttatgaaaataagctgaaaa 33319830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 39073750 - 39073709
Alignment:
Q  96 tttttataagctattttggagaacttgtgaaaataagctgaa 137  Q
    |||||||||||||| |||||||||| ||||||||||| ||||    
T  39073750 tttttataagctatattggagaactagtgaaaataagttgaa 39073709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 40279204 - 40279249
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| ||||||||| ||||||||||| ||||||| |||||||||    
T  40279204 tgttttcataagctatgttggagaacttatgaaaattagctgaaaa 40279249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 42409372 - 42409327
Alignment:
Q  142 ataaactgttttcataagctgttatggggagcttatgaaaataagc 187  Q
    |||||||||||||||||| | || ||| ||||||||||||||||||    
T  42409372 ataaactgttttcataagttattctggagagcttatgaaaataagc 42409327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 45229518 - 45229563
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| ||||||||| || |||||||| |||||||||||||||||    
T  45229518 tgttttcataagctatcttcgagaacttatgaaaataagctgaaaa 45229563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 1939398 - 1939334
Alignment:
Q  145 aactgttttcataagctgttatggggagcttatgaaaataagcagaaaaaaggttatggacatgt 209  Q
    ||||||||||||||||| |  ||| ||||||||| |||||||  ||||| || ||||||||||||    
T  1939398 aactgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgt 1939334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 3078703 - 3078655
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||||||||||||| ||||||| ||| || ||||||||| |||||||    
T  3078703 tgtttttataagctatcttggagagcttctggaaataagctaaaaacaa 3078655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 8017441 - 8017489
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| ||||||||| ||||||||||| |||||||| || ||||||||    
T  8017441 tgttttcataagctatcttggagaacttatgaaaatacgcagaaaacaa 8017489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 10646350 - 10646306
Alignment:
Q  96 tttttataagctattttggagaacttgtgaaaataagctgaaaac 140  Q
    |||| |||||||||||| |||||||| |||||||||| |||||||    
T  10646350 ttttcataagctattttagagaacttatgaaaataagatgaaaac 10646306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 33931633 - 33931589
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaa 138  Q
    |||||| |||||||||||||||||| | ||| |||||||||||||    
T  33931633 tgttttcataagctattttggagaaatagtggaaataagctgaaa 33931589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 15784339 - 15784384
Alignment:
Q  97 ttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||    
T  15784339 ttttataagctatcttggagaacttgtgaaaataagctaaaaacaa 15784384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 139
Target Start/End: Original strand, 5709633 - 5709679
Alignment:
Q  93 gtgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  5709633 gtgtttttagaagctatattggagaacttgtgaaaataagttgaaaa 5709679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 3224429 - 3224478
Alignment:
Q  93 gtgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||||||||||||||| | |||||||| |||||||||||||| |||||    
T  3224429 gtgtttttataagctattctagagaacttatgaaaataagctgagaacaa 3224478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 7137061 - 7137016
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| ||||||||| ||||||||||| |||||||||||||||||    
T  7137061 tgttttcataagctatcttggagaacttatgaaaataagctgaaaa 7137016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 27820400 - 27820355
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||||||||| |||||||| || |||||||||||||||||    
T  27820400 tgtttttataagctatcttggagaatttatgaaaataagctgaaaa 27820355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 37631622 - 37631577
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||    
T  37631622 tgtttttgtaagctatattggagaacttatgaaaataagctgaaaa 37631577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 12564562 - 12564514
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| ||||||||| ||||||||||| || |||||||||||||||||    
T  12564562 tgttttcataagctatcttggagaacttatggaaataagctgaaaacaa 12564514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 34290243 - 34290291
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| ||||||||| ||| ||||||| ||||||||||||||||||||    
T  34290243 tgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaa 34290291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 38503528 - 38503480
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    ||||||| | |||||| ||||||||||| ||||||||||||||||||||    
T  38503528 tgtttttgttagctatcttggagaacttatgaaaataagctgaaaacaa 38503480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 35179146 - 35179193
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||| ||||| |||| |||||||||| |||||||||||||||||||    
T  35179146 tgttttcataagttattatggagaacttatgaaaataagctgaaaaca 35179193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 45975697 - 45975744
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||| ||||||||| |||||||| || |||||||||||||||||||    
T  45975697 tgttttcataagctatcttggagaatttatgaaaataagctgaaaaca 45975744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 3234078 - 3234040
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataag 132  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  3234078 tgtttttataagctatattggagaacttatgaaaataag 3234040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Complemental strand, 10199469 - 10199423
Alignment:
Q  96 tttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||| |||||||||||| |||| ||| ||||||||||||||||||||    
T  10199469 ttttcataagctattttagagagcttatgaaaataagctgaaaacaa 10199423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 17603447 - 17603409
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataag 132  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  17603447 tgtttttataagctatattggagaacttctgaaaataag 17603409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 1509758 - 1509803
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||||||| | |||||||||||||| ||||||| ||||||    
T  1509758 tgtttttataagctctgttggagaacttgtgtaaataagttgaaaa 1509803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 10809362 - 10809399
Alignment:
Q  104 agctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  10809362 agctatattggagaacttatgaaaataagctgaaaaca 10809399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 14443455 - 14443504
Alignment:
Q  93 gtgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    ||||||||||||||||  |||||||| || |||||||||| |||||||||    
T  14443455 gtgtttttataagctacattggagaatttatgaaaataaggtgaaaacaa 14443504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 24915114 - 24915069
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| ||||||| | |||||||||||||||||||||| ||||||    
T  24915114 tgttttcataagctgtcttggagaacttgtgaaaataagttgaaaa 24915069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 28837413 - 28837368
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||||||||||| ||||||||||| | |||||| ||||||    
T  28837413 tgtttttataagctatttaggagaacttgtaacaataagttgaaaa 28837368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 35179140 - 35179201
Alignment:
Q  142 ataaactgttttcataagctgttatggggagcttatgaaaataagcagaaaaaaggttatgg 203  Q
    |||| ||||||||||||| | |||||| || ||||||||||||||| ||||| || ||||||    
T  35179140 ataagctgttttcataagttattatggagaacttatgaaaataagctgaaaacagcttatgg 35179201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 39603894 - 39603849
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||| ||||||||||| | ||| |||||||||||||||||    
T  39603894 tgtttttatatgctattttggatagcttatgaaaataagctgaaaa 39603849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 41195256 - 41195211
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| |||| |||| ||||||||||| |||||||||||||||||    
T  41195256 tgttttcataaactatcttggagaacttatgaaaataagctgaaaa 41195211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 49938754 - 49938799
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||||||||| || |||||||| |||||||||| ||||||    
T  49938754 tgtttttataagctatattagagaacttatgaaaataagttgaaaa 49938799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 51695558 - 51695513
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| ||||||||| |||||||| || |||||||||||||||||    
T  51695558 tgttttcataagctatcttggagaatttatgaaaataagctgaaaa 51695513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 2462966 - 2463006
Alignment:
Q  101 ataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    ||||||| ||||| ||| |||||||||||||||||||||||    
T  2462966 ataagctgttttgaagagcttgtgaaaataagctgaaaaca 2463006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 4700129 - 4700081
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    ||||||||||| ||||  |||||| ||| ||||||||||||||||||||    
T  4700129 tgtttttataaactatcctggagagcttatgaaaataagctgaaaacaa 4700081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 5887057 - 5887009
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    ||||| ||||||| || |||||||||||  |||||||||||||||||||    
T  5887057 tgtttctataagccatcttggagaacttacgaaaataagctgaaaacaa 5887009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 7472325 - 7472365
Alignment:
Q  101 ataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    ||||||||| ||||||| ||| |||||||||||||||||||    
T  7472325 ataagctatcttggagagcttatgaaaataagctgaaaaca 7472365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 13810005 - 13810045
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagct 134  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  13810005 tgtttttataaactatattagagaacttgtgaaaataagct 13810045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 19389909 - 19389953
Alignment:
Q  95 gtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||| ||||||||| ||||||| |||||||||||||||| ||||    
T  19389909 gttttcataagctatcttggagagcttgtgaaaataagctaaaaa 19389953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 27140485 - 27140533
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    ||||||||||||||||  |||||| ||| || |||||||||||||||||    
T  27140485 tgtttttataagctatcatggagagcttatgcaaataagctgaaaacaa 27140533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 37593740 - 37593700
Alignment:
Q  101 ataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    ||||||||||||| ||| ||| |||||||||||||||||||    
T  37593740 ataagctattttgaagagcttatgaaaataagctgaaaaca 37593700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 51190860 - 51190900
Alignment:
Q  99 ttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||||||||| ||| ||||||| |||||||||||||||||    
T  51190860 ttataagctatcttgaagaacttatgaaaataagctgaaaa 51190900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000009; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 47130848 - 47130802
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaac 140  Q
    |||||| ||||||||| |||||||||||||||||||||| |||||||    
T  47130848 tgttttcataagctatcttggagaacttgtgaaaataagttgaaaac 47130802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 9038119 - 9038168
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaat 143  Q
    |||||| |||| ||||  ||||||||||||||||||||||||||||||||    
T  9038119 tgttttcataaactatcatggagaacttgtgaaaataagctgaaaacaat 9038168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 9050642 - 9050687
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||| |||| |||| |||||||||||||||||||||||||||||    
T  9050642 tgttttcataaactatcttggagaacttgtgaaaataagctgaaaa 9050687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 25670649 - 25670600
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaat 143  Q
    |||||||||||  ||| ||||||| |||||||||||||||||||||||||    
T  25670649 tgtttttataacatatcttggagagcttgtgaaaataagctgaaaacaat 25670600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 46280335 - 46280290
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||    
T  46280335 tgtttttataagctatattggagaacttatgaaaataggctgaaaa 46280290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 7244687 - 7244735
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| ||||||||| ||||||| ||| ||||||||||||||||||||    
T  7244687 tgttttcataagctatattggagagcttatgaaaataagctgaaaacaa 7244735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 19022648 - 19022600
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||||||||||||| ||||||||||| |||||||||| |||| ||||    
T  19022648 tgtttttataagctatattggagaacttatgaaaataagttgaagacaa 19022600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 20526453 - 20526500
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||| ||||||||||||||||||||  |||||||||||| ||||||    
T  20526453 tgttttcataagctattttggagaactaatgaaaataagctaaaaaca 20526500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 33678787 - 33678834
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||| ||||||||| ||||| |||||||||||||||| ||||||||    
T  33678787 tgttttcataagctatcttggaaaacttgtgaaaataagttgaaaaca 33678834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 45901182 - 45901225
Alignment:
Q  170 gagcttatgaaaataagcagaaaaaaggttatggacatgttata 213  Q
    |||||||||||||||| | |||||||| ||||||||||||||||    
T  45901182 gagcttatgaaaataaactgaaaaaagcttatggacatgttata 45901225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 7244683 - 7244732
Alignment:
Q  144 aaactgttttcataagctgttatggggagcttatgaaaataagcagaaaa 193  Q
    |||||||||||||||||| |  ||| |||||||||||||||||| |||||    
T  7244683 aaactgttttcataagctatattggagagcttatgaaaataagctgaaaa 7244732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 28128450 - 28128409
Alignment:
Q  102 taagctattttggagaacttgtgaaaataagctgaaaacaat 143  Q
    ||||||||||||||||| || || ||||||||||||||||||    
T  28128450 taagctattttggagaatttatggaaataagctgaaaacaat 28128409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 44808189 - 44808226
Alignment:
Q  172 gcttatgaaaataagcagaaaaaaggttatggacatgt 209  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  44808189 gcttatgaaaataagctgaaaacaggttatggacatgt 44808226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 45790488 - 45790443
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||||||||| |||| ||||| ||||| |||||||||||||||||    
T  45790488 tgtttttataaactatattggataacttatgaaaataagctgaaaa 45790443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 14768130 - 14768174
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaa 138  Q
    |||||||||||| ||| || |||||||| ||||||||||||||||    
T  14768130 tgtttttataagttatcttcgagaacttttgaaaataagctgaaa 14768174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 47559664 - 47559616
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| ||||| ||||||||||||||| ||||||| ||| ||||||||    
T  47559664 tgttttcataagttattttggagaacttatgaaaatgagccgaaaacaa 47559616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000009; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 141
Target Start/End: Complemental strand, 835311 - 835265
Alignment:
Q  95 gtttttataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  835311 gttttcataagctatcttggagaacttatgaaaataagctgaaaaca 835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 4246411 - 4246478
Alignment:
Q  142 ataaactgttttcataagctgttatggggagcttatgaaaataagcagaaaaaaggttatggacatgt 209  Q
    |||| ||||||||||||||| |||||| |||| ||| ||||||||  ||||| || ||||||||||||    
T  4246411 ataagctgttttcataagctattatggagagcatataaaaataagttgaaaacagcttatggacatgt 4246478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 31624996 - 31624957
Alignment:
Q  102 taagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  31624996 taagctatattggagaacttatgaaaataagctgaaaaca 31624957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 33089502 - 33089552
Alignment:
Q  137 aaacaataaactgttttcataagctgttatggggagcttatgaaaataagc 187  Q
    |||| |||||||||||||||||||| |  |||||||| |||||||||||||    
T  33089502 aaacgataaactgttttcataagctatcttggggagcctatgaaaataagc 33089552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 34430525 - 34430479
Alignment:
Q  93 gtgtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||||| ||||||||| |||||||| || |||||||||||||||||    
T  34430525 gtgttttcataagctatcttggagaagttatgaaaataagctgaaaa 34430479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 12628355 - 12628396
Alignment:
Q  100 tataagctattttggagaacttgtgaaaataagctgaaaaca 141  Q
    |||||||||||||||||||||| ||||| |||| ||||||||    
T  12628355 tataagctattttggagaacttatgaaagtaagttgaaaaca 12628396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 837278 - 837234
Alignment:
Q  95 gtttttataagctattttggagaacttgtgaaaataagctgaaaa 139  Q
    ||||| || |||||| ||||||||||| |||||||||||||||||    
T  837278 gttttcattagctatcttggagaacttatgaaaataagctgaaaa 837234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 2455266 - 2455314
Alignment:
Q  94 tgtttttataagctattttggagaacttgtgaaaataagctgaaaacaa 142  Q
    |||||| ||| || || |||||||| |||||||||||||||||||||||    
T  2455266 tgttttcatatgcaatcttggagaagttgtgaaaataagctgaaaacaa 2455314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University