View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10775_low_9 (Length: 250)
Name: NF10775_low_9
Description: NF10775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10775_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 42924223 - 42924474
Alignment:
| Q |
1 |
ccaaaatttttatccaatcaaatttgtagctcctagccaaacctagatcctattaaa------------agtttaattaagataagatctaagtaggaca |
88 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
42924223 |
ccaaaatttttatccagtcaaatttgtagctcctagccaaacctagatcctattaaacctgattataagagtttaattaagataagatctaagtaggaca |
42924322 |
T |
|
| Q |
89 |
tggcttgatgatgttgaggtatgttcaaatcatatgatagtaaatgaacatatcatcatatacactaaatttctcaaattagtcacctgttgttgactga |
188 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42924323 |
tggcttgatgatgttgaggtatgttcaaatcatatgatagtaaatgaacatatcatcatatacactaaatttctcaaattagtcacctgttgttgactga |
42924422 |
T |
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| Q |
189 |
tgcacttagtgttactcacatgagaccttagtgcctttctctaattcctttg |
240 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42924423 |
tgcacttggtgttactcacatgagaccttagtgcctttctctaattcctttg |
42924474 |
T |
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