View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10776_high_4 (Length: 231)
Name: NF10776_high_4
Description: NF10776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10776_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 17 - 215
Target Start/End: Original strand, 54915678 - 54915876
Alignment:
| Q |
17 |
agacaacaaacaacgcagatgactaaatatcggaaaataaaatggcatcacattagaagttccgagtaaaagagtacacaccatgacaaatgataataga |
116 |
Q |
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| T |
54915678 |
agacaataaacaacgccgataactaaatatcggaaaataaaatggcatcacattagaagttccgagtaaaagagaacacaccatgacaaatgatgataga |
54915777 |
T |
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| Q |
117 |
tggaacatcctggataacccaacaaaacatatgaatatcttttctgataaatgaaacacaagaattacctaaatctaaaataagcaattagtatcaaag |
215 |
Q |
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| T |
54915778 |
tgaaacatcctggataacccaacaaaacatatgaatatcttttctgataaatgaaacacaagaattacctaaatctaaaataagcagttagtatcaaag |
54915876 |
T |
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