View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10779_high_6 (Length: 236)
Name: NF10779_high_6
Description: NF10779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10779_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 36370537 - 36370330
Alignment:
| Q |
14 |
atgaattatgttaacttggtacacatcaaaataatcagttatacagtaaacaacacttgtggaagcaggtacaaaatagaattcaaacgaagctgtttag |
113 |
Q |
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| T |
36370537 |
atgaattatgttaacttggtacacatcaaaataatcagttatacagtaaacaacacttgtggaagcaggtacaaaataatattcaaacgaagctgtttag |
36370438 |
T |
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| Q |
114 |
tgtataaggtgaaaacttagaaataaacctctcatcaatatatagggggacgtatttggatccatatgagattcatatataatataatcaatcagacaag |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36370437 |
tgtataaggtgaaaacttagaaataaacctctcatcaatatatagggggacttatttggatccatatgagattcatatataatataatcaatcagacaag |
36370338 |
T |
|
| Q |
214 |
gttccctc |
221 |
Q |
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|||||||| |
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| T |
36370337 |
gttccctc |
36370330 |
T |
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