View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10779_low_12 (Length: 240)
Name: NF10779_low_12
Description: NF10779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10779_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 331317 - 331521
Alignment:
| Q |
16 |
ccaacaacatgtcaaataattttctttcatcaacccaatcagattcatattcttgttcatcttcttgttgtttaacaagaacattgaaaacaaagcgtgg |
115 |
Q |
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| T |
331317 |
ccaacaacatgtcaaataattttctttcatcaaaccaatcagattcatattcttgttcatcttcttgttgtttaacaagaacattgaaaacaaagcgtgg |
331416 |
T |
|
| Q |
116 |
aaataataataagaagatgcatcgttctctcatcacagcattgcaagaatctccttcttctaattaccattctcttcctgatcctccctcatgctcagac |
215 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
331417 |
aaataaaaataagaagatgcatcgttctctcatcacagcattgcaagaatctccttcttctaattaccattctcttcctgatcctccctcatgctcagac |
331516 |
T |
|
| Q |
216 |
aatgc |
220 |
Q |
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||||| |
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| T |
331517 |
aatgc |
331521 |
T |
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