View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10779_low_20 (Length: 212)

Name: NF10779_low_20
Description: NF10779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10779_low_20
NF10779_low_20
[»] chr8 (21 HSPs)
chr8 (15-193)||(41125286-41125462)
chr8 (140-193)||(30461602-30461653)
chr8 (143-190)||(43468686-43468731)
chr8 (160-193)||(14683942-14683975)
chr8 (143-195)||(44360918-44360968)
chr8 (146-188)||(24074577-24074617)
chr8 (160-190)||(3379644-3379674)
chr8 (160-190)||(5184883-5184913)
chr8 (160-190)||(10199738-10199768)
chr8 (160-190)||(15042361-15042391)
chr8 (160-190)||(28378882-28378912)
chr8 (160-190)||(33570425-33570455)
chr8 (160-190)||(34073235-34073265)
chr8 (160-190)||(36359714-36359744)
chr8 (160-190)||(43874973-43875003)
chr8 (146-190)||(7649597-7649639)
chr8 (146-190)||(14684200-14684242)
chr8 (160-188)||(13702348-13702376)
chr8 (143-190)||(14010753-14010798)
chr8 (160-188)||(26703886-26703914)
chr8 (146-190)||(31802858-31802901)
[»] chr1 (18 HSPs)
chr1 (143-193)||(39994829-39994877)
chr1 (143-190)||(32711125-32711170)
chr1 (147-190)||(39433427-39433468)
chr1 (143-190)||(42832016-42832061)
chr1 (160-190)||(1031656-1031686)
chr1 (160-190)||(3532970-3533000)
chr1 (160-190)||(6014514-6014544)
chr1 (160-190)||(11405525-11405555)
chr1 (160-190)||(15774308-15774338)
chr1 (160-190)||(19793595-19793625)
chr1 (160-190)||(21884644-21884674)
chr1 (160-190)||(34560334-34560364)
chr1 (160-190)||(35593832-35593862)
chr1 (160-190)||(37733824-37733854)
chr1 (160-189)||(23345053-23345082)
chr1 (146-190)||(38019931-38019973)
chr1 (161-190)||(39434687-39434716)
chr1 (146-190)||(50755413-50755455)
[»] chr3 (29 HSPs)
chr3 (140-193)||(48558752-48558803)
chr3 (160-193)||(28206533-28206566)
chr3 (146-190)||(33206826-33206868)
chr3 (146-190)||(34344762-34344804)
chr3 (146-190)||(43566780-43566822)
chr3 (146-190)||(46328908-46328950)
chr3 (146-193)||(24751506-24751551)
chr3 (160-190)||(335026-335056)
chr3 (160-190)||(2732732-2732762)
chr3 (160-190)||(8175829-8175859)
chr3 (160-190)||(14417937-14417967)
chr3 (160-190)||(16006502-16006532)
chr3 (160-190)||(20623773-20623803)
chr3 (160-190)||(24537896-24537926)
chr3 (160-190)||(32508790-32508820)
chr3 (160-190)||(35477800-35477830)
chr3 (146-187)||(36256663-36256702)
chr3 (160-190)||(43774254-43774284)
chr3 (160-190)||(45713549-45713579)
chr3 (160-193)||(13874830-13874863)
chr3 (160-193)||(16277947-16277980)
chr3 (146-190)||(30058806-30058848)
chr3 (146-190)||(47191442-47191484)
chr3 (160-189)||(50144602-50144631)
chr3 (143-190)||(31698602-31698647)
chr3 (151-190)||(41767757-41767794)
chr3 (146-185)||(42832046-42832083)
chr3 (160-188)||(48173357-48173385)
chr3 (160-188)||(49019254-49019282)
[»] chr5 (23 HSPs)
chr5 (143-190)||(2029109-2029154)
chr5 (143-190)||(43166738-43166783)
chr5 (140-189)||(42455372-42455419)
chr5 (146-190)||(9577362-9577404)
chr5 (146-190)||(29096292-29096334)
chr5 (146-190)||(32158398-32158440)
chr5 (160-192)||(14487628-14487660)
chr5 (160-190)||(1244723-1244753)
chr5 (160-190)||(4216811-4216841)
chr5 (160-190)||(8015904-8015934)
chr5 (146-187)||(18202077-18202116)
chr5 (160-190)||(18478072-18478102)
chr5 (160-190)||(19059000-19059030)
chr5 (160-190)||(20762350-20762380)
chr5 (160-190)||(20945887-20945917)
chr5 (160-190)||(30403819-30403849)
chr5 (160-190)||(33729847-33729877)
chr5 (160-190)||(38618677-38618707)
chr5 (160-190)||(41843727-41843757)
chr5 (146-190)||(27219547-27219589)
chr5 (160-193)||(34921110-34921143)
chr5 (143-190)||(10508649-10508694)
chr5 (146-189)||(29331313-29331354)
[»] chr4 (34 HSPs)
chr4 (143-190)||(12820386-12820431)
chr4 (140-190)||(27584036-27584084)
chr4 (146-190)||(15021494-15021536)
chr4 (146-190)||(39992904-39992946)
chr4 (146-193)||(54304913-54304958)
chr4 (146-188)||(17859849-17859889)
chr4 (146-188)||(20753109-20753149)
chr4 (159-190)||(32885757-32885788)
chr4 (160-190)||(534760-534790)
chr4 (160-190)||(3442912-3442942)
chr4 (160-190)||(3465652-3465682)
chr4 (160-190)||(12856253-12856283)
chr4 (160-190)||(20266932-20266962)
chr4 (160-190)||(28221303-28221333)
chr4 (160-190)||(30152183-30152213)
chr4 (160-190)||(34684637-34684667)
chr4 (160-190)||(36008344-36008374)
chr4 (160-190)||(37032175-37032205)
chr4 (160-190)||(38433380-38433410)
chr4 (160-190)||(47017942-47017972)
chr4 (160-189)||(1297923-1297952)
chr4 (146-190)||(2487356-2487398)
chr4 (160-193)||(13073151-13073184)
chr4 (160-193)||(26203783-26203816)
chr4 (146-190)||(30295582-30295624)
chr4 (146-190)||(30324484-30324526)
chr4 (146-190)||(31578086-31578128)
chr4 (160-193)||(44975974-44976007)
chr4 (160-188)||(11039932-11039960)
chr4 (146-193)||(21476065-21476110)
chr4 (161-193)||(22158313-22158345)
chr4 (160-188)||(49280665-49280693)
chr4 (160-188)||(52560835-52560863)
chr4 (159-187)||(53291514-53291542)
[»] scaffold0533 (1 HSPs)
scaffold0533 (143-189)||(9396-9440)
[»] chr7 (23 HSPs)
chr7 (143-192)||(21925542-21925589)
chr7 (146-190)||(21285337-21285379)
chr7 (146-190)||(29658256-29658298)
chr7 (146-190)||(34948175-34948217)
chr7 (159-191)||(31279314-31279346)
chr7 (140-190)||(43902514-43902562)
chr7 (160-190)||(2366426-2366456)
chr7 (146-188)||(4590595-4590637)
chr7 (160-190)||(5787530-5787560)
chr7 (160-190)||(8214179-8214209)
chr7 (160-190)||(8724449-8724479)
chr7 (160-190)||(14102530-14102560)
chr7 (160-190)||(14412547-14412577)
chr7 (160-190)||(22965954-22965984)
chr7 (160-190)||(30644238-30644268)
chr7 (160-190)||(45011654-45011684)
chr7 (146-190)||(17900863-17900905)
chr7 (146-190)||(33202538-33202580)
chr7 (147-187)||(38792284-38792322)
chr7 (160-189)||(47403584-47403613)
chr7 (160-188)||(25086946-25086974)
chr7 (143-190)||(30604401-30604446)
chr7 (143-190)||(35368465-35368510)
[»] chr6 (15 HSPs)
chr6 (159-193)||(7709950-7709984)
chr6 (146-190)||(5134418-5134460)
chr6 (146-190)||(18904667-18904709)
chr6 (146-190)||(25020512-25020554)
chr6 (159-190)||(5678212-5678243)
chr6 (140-190)||(16251501-16251549)
chr6 (160-190)||(6530200-6530230)
chr6 (160-190)||(12089166-12089196)
chr6 (160-190)||(19165419-19165449)
chr6 (160-190)||(22389746-22389776)
chr6 (160-190)||(35190832-35190862)
chr6 (160-189)||(12127905-12127934)
chr6 (160-188)||(9424514-9424542)
chr6 (162-190)||(30566127-30566155)
chr6 (160-192)||(32057101-32057133)
[»] scaffold0039 (1 HSPs)
scaffold0039 (160-193)||(101897-101930)
[»] chr2 (18 HSPs)
chr2 (146-190)||(3179393-3179435)
chr2 (146-190)||(8234776-8234818)
chr2 (146-188)||(22538610-22538650)
chr2 (160-190)||(3037618-3037648)
chr2 (160-190)||(11133145-11133175)
chr2 (140-185)||(18209919-18209962)
chr2 (160-190)||(30474191-30474221)
chr2 (160-190)||(34018066-34018096)
chr2 (146-190)||(580767-580809)
chr2 (143-187)||(1836660-1836702)
chr2 (160-189)||(2557579-2557608)
chr2 (140-188)||(11837060-11837106)
chr2 (160-193)||(16028104-16028137)
chr2 (146-190)||(17154718-17154760)
chr2 (160-193)||(20533823-20533856)
chr2 (146-189)||(20122459-20122500)
chr2 (160-188)||(20684035-20684063)
chr2 (143-190)||(44721685-44721730)
[»] scaffold2098 (1 HSPs)
scaffold2098 (160-190)||(610-640)
[»] scaffold1990 (1 HSPs)
scaffold1990 (160-190)||(963-993)
[»] scaffold0229 (1 HSPs)
scaffold0229 (160-190)||(22492-22522)
[»] scaffold0092 (1 HSPs)
scaffold0092 (160-190)||(47313-47343)
[»] scaffold0024 (1 HSPs)
scaffold0024 (163-193)||(133116-133146)
[»] scaffold0009 (1 HSPs)
scaffold0009 (160-193)||(185508-185541)
[»] scaffold1086 (1 HSPs)
scaffold1086 (162-190)||(2557-2585)


Alignment Details
Target: chr8 (Bit Score: 104; Significance: 5e-52; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 41125286 - 41125462
Alignment:
Q  15 agagatgttcgatgtttaaacctcaatcctcgtgtataatatgtaatatccttctcaaccgatctaaactcacaaaattgattagttagttttttaatag 114  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41125286 agaggtgttcgatgtttaaacctcaatcctcgtgtataatatgtaatatccctctcaaccgatctaaactcacaaaattgattagttag-tttttaatag 41125384  T
Q  115 ctatcgaaataaatcaa--nnnnnnnngttagatagcctagtggctatagaattcaccttataaggtgaataagtgggatg 193  Q
    |||||||||||||||||          || || ||||||||||    ||||||||||||||||||||||||||||||||||    
T  41125385 ctatcgaaataaatcaattttttttttgtcaggtagcctagtg---ctagaattcaccttataaggtgaataagtgggatg 41125462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 30461653 - 30461602
Alignment:
Q  140 gttagatagcctagtggctatagaattcaccttataaggtgaataagtgggatg 193  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  30461653 gttagatagcctagtggcta--gaattcaccttataaggtgaataagtgagatg 30461602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 43468686 - 43468731
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||    
T  43468686 agatagcctagtggcta--gaattcaccttataaggtgaataagtggg 43468731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 14683975 - 14683942
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgggatg 193  Q
    ||||||||||||||||||||||||||||||||||    
T  14683975 tagaattcaccttataaggtgaataagtgggatg 14683942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 44360918 - 44360968
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtgggatgat 195  Q
    |||||| ||||||||||  ||||||||||||||||||| ||||||||||||||    
T  44360918 agatagtctagtggcta--gaattcaccttataaggtggataagtgggatgat 44360968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 24074617 - 24074577
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtg 188  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  24074617 tagcctagtggcta--gaattcaccttataaggtgaataagtg 24074577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 3379644 - 3379674
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  3379644 tagaattcaccttataaggtgaataagtggg 3379674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 5184883 - 5184913
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  5184883 tagaattcaccttataaggtgaataagtggg 5184913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 10199738 - 10199768
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  10199738 tagaattcaccttataaggtgaataagtggg 10199768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 15042361 - 15042391
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  15042361 tagaattcaccttataaggtgaataagtggg 15042391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 28378912 - 28378882
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  28378912 tagaattcaccttataaggtgaataagtggg 28378882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 33570425 - 33570455
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  33570425 tagaattcaccttataaggtgaataagtggg 33570455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 34073235 - 34073265
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  34073235 tagaattcaccttataaggtgaataagtggg 34073265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 36359714 - 36359744
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  36359714 tagaattcaccttataaggtgaataagtggg 36359744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 43874973 - 43875003
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  43874973 tagaattcaccttataaggtgaataagtggg 43875003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 7649639 - 7649597
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||    
T  7649639 tagcctagtggcta--gaattcaccttgtaaggtgaataagtggg 7649597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 14684200 - 14684242
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||    
T  14684200 tagcctagtggctata--attcaccttataagatgaataagtggg 14684242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 188
Target Start/End: Original strand, 13702348 - 13702376
Alignment:
Q  160 tagaattcaccttataaggtgaataagtg 188  Q
    |||||||||||||||||||||||||||||    
T  13702348 tagaattcaccttataaggtgaataagtg 13702376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 14010753 - 14010798
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||| |||||||||  ||||| |||||||||||||||||||||||    
T  14010753 agatagcttagtggcta--gaatttaccttataaggtgaataagtggg 14010798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 188
Target Start/End: Original strand, 26703886 - 26703914
Alignment:
Q  160 tagaattcaccttataaggtgaataagtg 188  Q
    |||||||||||||||||||||||||||||    
T  26703886 tagaattcaccttataaggtgaataagtg 26703914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 31802858 - 31802901
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||| |||||||||  |||||||||||||||||    
T  31802858 tagcctagtggctata-aattcacctcttaaggtgaataagtggg 31802901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 39994829 - 39994877
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtgggatg 193  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  39994829 agatagcctagtggcta--gaattcaccttataaggtgaataagtgggatg 39994877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 32711125 - 32711170
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    |||||| ||||||||||  |||||||||||||||||||||||||||||    
T  32711125 agatagtctagtggcta--gaattcaccttataaggtgaataagtggg 32711170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 39433468 - 39433427
Alignment:
Q  147 agcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  39433468 agcctagtggcta--gaattcaccttataaggtgaataagtggg 39433427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 42832061 - 42832016
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||    
T  42832061 agatagcctagtgacta--gaattcaccttataaggtgaataagtggg 42832016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 1031686 - 1031656
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  1031686 tagaattcaccttataaggtgaataagtggg 1031656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 3532970 - 3533000
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  3532970 tagaattcaccttataaggtgaataagtggg 3533000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 6014514 - 6014544
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  6014514 tagaattcaccttataaggtgaataagtggg 6014544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 11405555 - 11405525
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  11405555 tagaattcaccttataaggtgaataagtggg 11405525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 15774308 - 15774338
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  15774308 tagaattcaccttataaggtgaataagtggg 15774338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 19793625 - 19793595
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  19793625 tagaattcaccttataaggtgaataagtggg 19793595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 21884674 - 21884644
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  21884674 tagaattcaccttataaggtgaataagtggg 21884644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 34560334 - 34560364
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  34560334 tagaattcaccttataaggtgaataagtggg 34560364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 35593862 - 35593832
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  35593862 tagaattcaccttataaggtgaataagtggg 35593832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 37733854 - 37733824
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  37733854 tagaattcaccttataaggtgaataagtggg 37733824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 189
Target Start/End: Original strand, 23345053 - 23345082
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgg 189  Q
    ||||||||||||||||||||||||||||||    
T  23345053 tagaattcaccttataaggtgaataagtgg 23345082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 38019931 - 38019973
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||    
T  38019931 tagcctagtggcta--gaattcactttataaggtgaataagtggg 38019973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 190
Target Start/End: Complemental strand, 39434716 - 39434687
Alignment:
Q  161 agaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||||||||||||||||||    
T  39434716 agaattcaccttataaggtgaataagtggg 39434687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 50755455 - 50755413
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||    
T  50755455 tagcctagtggcta--gaattcactttataaggtgaataagtggg 50755413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 48558803 - 48558752
Alignment:
Q  140 gttagatagcctagtggctatagaattcaccttataaggtgaataagtgggatg 193  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  48558803 gttagatagcctagtggctata--attcaccttataaagtgaataagtgggatg 48558752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 28206533 - 28206566
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgggatg 193  Q
    ||||||||||||||||||||||||||||||||||    
T  28206533 tagaattcaccttataaggtgaataagtgggatg 28206566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 33206868 - 33206826
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  33206868 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 33206826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 34344762 - 34344804
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  34344762 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 34344804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 43566780 - 43566822
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  43566780 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 43566822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 46328908 - 46328950
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  46328908 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 46328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 24751551 - 24751506
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtgggatg 193  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||||    
T  24751551 tagcctagtggcta--gaattcaccttataaggtgaataagttggatg 24751506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 335026 - 335056
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  335026 tagaattcaccttataaggtgaataagtggg 335056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 2732762 - 2732732
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  2732762 tagaattcaccttataaggtgaataagtggg 2732732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 8175859 - 8175829
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  8175859 tagaattcaccttataaggtgaataagtggg 8175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 14417967 - 14417937
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  14417967 tagaattcaccttataaggtgaataagtggg 14417937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 16006502 - 16006532
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  16006502 tagaattcaccttataaggtgaataagtggg 16006532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 20623773 - 20623803
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  20623773 tagaattcaccttataaggtgaataagtggg 20623803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 24537926 - 24537896
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  24537926 tagaattcaccttataaggtgaataagtggg 24537896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 32508790 - 32508820
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  32508790 tagaattcaccttataaggtgaataagtggg 32508820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 35477830 - 35477800
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  35477830 tagaattcaccttataaggtgaataagtggg 35477800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 36256663 - 36256702
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagt 187  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  36256663 tagcctagtggcta--gaattcaccttataaggtgaataagt 36256702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 43774284 - 43774254
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  43774284 tagaattcaccttataaggtgaataagtggg 43774254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 45713579 - 45713549
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  45713579 tagaattcaccttataaggtgaataagtggg 45713549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 13874830 - 13874863
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgggatg 193  Q
    |||||||||||||||||||||||||| |||||||    
T  13874830 tagaattcaccttataaggtgaataaatgggatg 13874863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 16277947 - 16277980
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgggatg 193  Q
    ||||||||| ||||||||||||||||||||||||    
T  16277947 tagaattcatcttataaggtgaataagtgggatg 16277980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 30058848 - 30058806
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||    
T  30058848 tagcctagtggcta--gaattcaccttataaggttaataagtggg 30058806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 47191484 - 47191442
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  ||||||| |||||||||||||||||||||    
T  47191484 tagcctagtggcta--gaattcatcttataaggtgaataagtggg 47191442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 189
Target Start/End: Original strand, 50144602 - 50144631
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgg 189  Q
    ||||||||||||||||||||||||||||||    
T  50144602 tagaattcaccttataaggtgaataagtgg 50144631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 31698647 - 31698602
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    |||||| ||||||||||  |||||||||||||||| ||||||||||||    
T  31698647 agatagtctagtggcta--gaattcaccttataagatgaataagtggg 31698602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 41767757 - 41767794
Alignment:
Q  151 tagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  41767757 tagtggctata--attcaccttataaggtgaataagtggg 41767794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 42832046 - 42832083
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataa 185  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  42832046 tagcctagtggcta--gaattcaccttataaggtgaataa 42832083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 188
Target Start/End: Complemental strand, 48173385 - 48173357
Alignment:
Q  160 tagaattcaccttataaggtgaataagtg 188  Q
    |||||||||||||||||||||||||||||    
T  48173385 tagaattcaccttataaggtgaataagtg 48173357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 188
Target Start/End: Complemental strand, 49019282 - 49019254
Alignment:
Q  160 tagaattcaccttataaggtgaataagtg 188  Q
    |||||||||||||||||||||||||||||    
T  49019282 tagaattcaccttataaggtgaataagtg 49019254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 2029109 - 2029154
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||    
T  2029109 agatagcctagtggcta--gaattcaccttataaggtgaataagtggg 2029154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 43166783 - 43166738
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||    
T  43166783 agatagcctagtggcta--gaattcaccttataaggtgaataagtggg 43166738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 42455372 - 42455419
Alignment:
Q  140 gttagatagcctagtggctatagaattcaccttataaggtgaataagtgg 189  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  42455372 gttaggtagcctagtggcta--gaattcaccttataaggtgaataagtgg 42455419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 9577404 - 9577362
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  9577404 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 9577362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 29096292 - 29096334
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  29096292 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 29096334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 32158398 - 32158440
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  32158398 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 32158440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 14487660 - 14487628
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgggat 192  Q
    |||||||||||||||||||||||||||||||||    
T  14487660 tagaattcaccttataaggtgaataagtgggat 14487628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 1244723 - 1244753
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  1244723 tagaattcaccttataaggtgaataagtggg 1244753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 4216811 - 4216841
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  4216811 tagaattcaccttataaggtgaataagtggg 4216841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 8015934 - 8015904
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  8015934 tagaattcaccttataaggtgaataagtggg 8015904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 18202077 - 18202116
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagt 187  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  18202077 tagcctagtggctata--attcaccttataaggtgaataagt 18202116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 18478102 - 18478072
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  18478102 tagaattcaccttataaggtgaataagtggg 18478072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 19059000 - 19059030
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  19059000 tagaattcaccttataaggtgaataagtggg 19059030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 20762380 - 20762350
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  20762380 tagaattcaccttataaggtgaataagtggg 20762350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 20945887 - 20945917
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  20945887 tagaattcaccttataaggtgaataagtggg 20945917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 30403849 - 30403819
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  30403849 tagaattcaccttataaggtgaataagtggg 30403819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 33729877 - 33729847
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  33729877 tagaattcaccttataaggtgaataagtggg 33729847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 38618677 - 38618707
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  38618677 tagaattcaccttataaggtgaataagtggg 38618707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 41843757 - 41843727
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  41843757 tagaattcaccttataaggtgaataagtggg 41843727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 27219547 - 27219589
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||    
T  27219547 tagcctagtggcta--gaattcaccttattaggtgaataagtggg 27219589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 34921110 - 34921143
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgggatg 193  Q
    ||||||||| ||||||||||||||||||||||||    
T  34921110 tagaattcaacttataaggtgaataagtgggatg 34921143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 10508694 - 10508649
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||| |||||| |  |||||||||||||||||||||||||||    
T  10508694 agatagcctattggctaaa--attcaccttataaggtgaataagtggg 10508649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 189
Target Start/End: Complemental strand, 29331354 - 29331313
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtgg 189  Q
    ||||||||||||||  |||||||||||||||| |||||||||||    
T  29331354 tagcctagtggcta--gaattcaccttataagatgaataagtgg 29331313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 12820386 - 12820431
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||    
T  12820386 agatagcctagtggcta--gaattcaccttataaggtgaataagtggg 12820431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 27584036 - 27584084
Alignment:
Q  140 gttagatagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||| ||||||||||||||  |||||||||||||||||||||||||||||    
T  27584036 gttaggtagcctagtggcta--gaattcaccttataaggtgaataagtggg 27584084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 15021536 - 15021494
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||||  |||||||||||||||||||||||||||    
T  15021536 tagcctagtggctata--attcaccttataaggtgaataagtggg 15021494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 39992946 - 39992904
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  39992946 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 39992904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 54304913 - 54304958
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtgggatg 193  Q
    ||||||||||||||  |||||||||||||||| |||||||||||||||    
T  54304913 tagcctagtggcta--gaattcaccttataagctgaataagtgggatg 54304958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 17859889 - 17859849
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtg 188  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  17859889 tagcctagtggcta--gaattcaccttataaggtgaataagtg 17859849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 20753109 - 20753149
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtg 188  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  20753109 tagcctagtggcta--gaattcaccttataaggtgaataagtg 20753149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 190
Target Start/End: Complemental strand, 32885788 - 32885757
Alignment:
Q  159 atagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||||||||||||||||||||    
T  32885788 atagaattcaccttataaggtgaataagtggg 32885757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 534760 - 534790
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  534760 tagaattcaccttataaggtgaataagtggg 534790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 3442942 - 3442912
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  3442942 tagaattcaccttataaggtgaataagtggg 3442912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 3465682 - 3465652
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  3465682 tagaattcaccttataaggtgaataagtggg 3465652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 12856283 - 12856253
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  12856283 tagaattcaccttataaggtgaataagtggg 12856253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 20266962 - 20266932
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  20266962 tagaattcaccttataaggtgaataagtggg 20266932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 28221303 - 28221333
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  28221303 tagaattcaccttataaggtgaataagtggg 28221333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 30152213 - 30152183
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  30152213 tagaattcaccttataaggtgaataagtggg 30152183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 34684667 - 34684637
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  34684667 tagaattcaccttataaggtgaataagtggg 34684637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 36008374 - 36008344
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  36008374 tagaattcaccttataaggtgaataagtggg 36008344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 37032175 - 37032205
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  37032175 tagaattcaccttataaggtgaataagtggg 37032205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 38433410 - 38433380
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  38433410 tagaattcaccttataaggtgaataagtggg 38433380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 47017942 - 47017972
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  47017942 tagaattcaccttataaggtgaataagtggg 47017972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 189
Target Start/End: Complemental strand, 1297952 - 1297923
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgg 189  Q
    ||||||||||||||||||||||||||||||    
T  1297952 tagaattcaccttataaggtgaataagtgg 1297923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 2487398 - 2487356
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||| ||||||||||||    
T  2487398 tagcctagtggcta--gaattcaccttataagatgaataagtggg 2487356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 13073151 - 13073184
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgggatg 193  Q
    |||||||||||||||||||| |||||||||||||    
T  13073151 tagaattcaccttataaggttaataagtgggatg 13073184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 26203783 - 26203816
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgggatg 193  Q
    |||||||||||||||||| |||||||||||||||    
T  26203783 tagaattcaccttataagatgaataagtgggatg 26203816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 30295624 - 30295582
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||    
T  30295624 tagcctagtggcta--gaattcaccttctaaggtgaataagtggg 30295582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 30324526 - 30324484
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||    
T  30324526 tagcctagtggcta--gaattcaccttctaaggtgaataagtggg 30324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 31578128 - 31578086
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||    
T  31578128 tagcctagtggcta--gaattcaccttataatgtgaataagtggg 31578086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 44976007 - 44975974
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgggatg 193  Q
    ||||||||| ||||||||||||||||||||||||    
T  44976007 tagaattcatcttataaggtgaataagtgggatg 44975974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 188
Target Start/End: Original strand, 11039932 - 11039960
Alignment:
Q  160 tagaattcaccttataaggtgaataagtg 188  Q
    |||||||||||||||||||||||||||||    
T  11039932 tagaattcaccttataaggtgaataagtg 11039960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 21476065 - 21476110
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtgggatg 193  Q
    ||||||||||||||  |||||||| ||||||| |||||||||||||||    
T  21476065 tagcctagtggcta--gaattcactttataagatgaataagtgggatg 21476110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 22158345 - 22158313
Alignment:
Q  161 agaattcaccttataaggtgaataagtgggatg 193  Q
    ||||||||||||||||||||||||||| |||||    
T  22158345 agaattcaccttataaggtgaataagttggatg 22158313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 188
Target Start/End: Original strand, 49280665 - 49280693
Alignment:
Q  160 tagaattcaccttataaggtgaataagtg 188  Q
    |||||||||||||||||||||||||||||    
T  49280665 tagaattcaccttataaggtgaataagtg 49280693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 188
Target Start/End: Complemental strand, 52560863 - 52560835
Alignment:
Q  160 tagaattcaccttataaggtgaataagtg 188  Q
    |||||||||||||||||||||||||||||    
T  52560863 tagaattcaccttataaggtgaataagtg 52560835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 187
Target Start/End: Complemental strand, 53291542 - 53291514
Alignment:
Q  159 atagaattcaccttataaggtgaataagt 187  Q
    |||||||||||||||||||||||||||||    
T  53291542 atagaattcaccttataaggtgaataagt 53291514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 9440 - 9396
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtgg 189  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  9440 agatagcctagtggcta--gaattcaccttataaggtgaataagtgg 9396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000007; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 21925589 - 21925542
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtgggat 192  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  21925589 agatagcctagtggcta--gaattcatcttataaggtgaataagtgggat 21925542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 21285337 - 21285379
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  21285337 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 21285379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 29658256 - 29658298
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  29658256 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 29658298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 34948217 - 34948175
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  34948217 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 34948175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 31279314 - 31279346
Alignment:
Q  159 atagaattcaccttataaggtgaataagtggga 191  Q
    |||||||||||||||||||||||||||||||||    
T  31279314 atagaattcaccttataaggtgaataagtggga 31279346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 43902514 - 43902562
Alignment:
Q  140 gttagatagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||| |||| |||||||||  |||||||||||||||||||||||||||||    
T  43902514 gttaggtagcatagtggcta--gaattcaccttataaggtgaataagtggg 43902562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 2366456 - 2366426
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  2366456 tagaattcaccttataaggtgaataagtggg 2366426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 4590595 - 4590637
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtg 188  Q
    |||||||||||||| | ||||||||||||||| ||||||||||    
T  4590595 tagcctagtggctagaaaattcaccttataagatgaataagtg 4590637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 5787560 - 5787530
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  5787560 tagaattcaccttataaggtgaataagtggg 5787530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 8214209 - 8214179
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  8214209 tagaattcaccttataaggtgaataagtggg 8214179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 8724479 - 8724449
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  8724479 tagaattcaccttataaggtgaataagtggg 8724449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 14102560 - 14102530
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  14102560 tagaattcaccttataaggtgaataagtggg 14102530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 14412577 - 14412547
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  14412577 tagaattcaccttataaggtgaataagtggg 14412547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 22965954 - 22965984
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  22965954 tagaattcaccttataaggtgaataagtggg 22965984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 30644268 - 30644238
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  30644268 tagaattcaccttataaggtgaataagtggg 30644238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 45011654 - 45011684
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  45011654 tagaattcaccttataaggtgaataagtggg 45011684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 17900863 - 17900905
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  ||||||||||||||||| |||||||||||    
T  17900863 tagcctagtggcta--gaattcaccttataaggagaataagtggg 17900905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 33202538 - 33202580
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||| ||||||||||||    
T  33202538 tagcctagtggcta--gaattcaccttataagatgaataagtggg 33202580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 38792322 - 38792284
Alignment:
Q  147 agcctagtggctatagaattcaccttataaggtgaataagt 187  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  38792322 agcctagtggcta--gaattcaccttataaggtgaataagt 38792284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 189
Target Start/End: Original strand, 47403584 - 47403613
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgg 189  Q
    ||||||||||||||||||||||||||||||    
T  47403584 tagaattcaccttataaggtgaataagtgg 47403613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 188
Target Start/End: Original strand, 25086946 - 25086974
Alignment:
Q  160 tagaattcaccttataaggtgaataagtg 188  Q
    |||||||||||||||||||||||||||||    
T  25086946 tagaattcaccttataaggtgaataagtg 25086974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 30604401 - 30604446
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    |||||| ||||||||||  |||||||||||||||||||||||| ||||    
T  30604401 agatagtctagtggcta--gaattcaccttataaggtgaataattggg 30604446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 35368510 - 35368465
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    |||||||| ||||||||  |||||||||||||||||||||||| ||||    
T  35368510 agatagcccagtggcta--gaattcaccttataaggtgaataaatggg 35368465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000007; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 7709984 - 7709950
Alignment:
Q  159 atagaattcaccttataaggtgaataagtgggatg 193  Q
    |||||||||||||||||||||||||||||||||||    
T  7709984 atagaattcaccttataaggtgaataagtgggatg 7709950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 5134418 - 5134460
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  5134418 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 5134460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 18904667 - 18904709
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  18904667 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 18904709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 25020512 - 25020554
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  25020512 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 25020554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 190
Target Start/End: Original strand, 5678212 - 5678243
Alignment:
Q  159 atagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||||||||||||||||||||    
T  5678212 atagaattcaccttataaggtgaataagtggg 5678243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 16251501 - 16251549
Alignment:
Q  140 gttagatagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||| |||||||||| |||  |||||||||||||||||||||||||||||    
T  16251501 gttaggtagcctagtgacta--gaattcaccttataaggtgaataagtggg 16251549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 6530200 - 6530230
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  6530200 tagaattcaccttataaggtgaataagtggg 6530230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 12089196 - 12089166
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  12089196 tagaattcaccttataaggtgaataagtggg 12089166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 19165449 - 19165419
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  19165449 tagaattcaccttataaggtgaataagtggg 19165419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 22389746 - 22389776
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  22389746 tagaattcaccttataaggtgaataagtggg 22389776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 35190862 - 35190832
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  35190862 tagaattcaccttataaggtgaataagtggg 35190832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 189
Target Start/End: Original strand, 12127905 - 12127934
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgg 189  Q
    ||||||||||||||||||||||||||||||    
T  12127905 tagaattcaccttataaggtgaataagtgg 12127934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 188
Target Start/End: Complemental strand, 9424542 - 9424514
Alignment:
Q  160 tagaattcaccttataaggtgaataagtg 188  Q
    |||||||||||||||||||||||||||||    
T  9424542 tagaattcaccttataaggtgaataagtg 9424514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 190
Target Start/End: Complemental strand, 30566155 - 30566127
Alignment:
Q  162 gaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||    
T  30566155 gaattcaccttataaggtgaataagtggg 30566127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 32057133 - 32057101
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgggat 192  Q
    |||||||||||||||||| ||||||||||||||    
T  32057133 tagaattcaccttataagatgaataagtgggat 32057101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 101930 - 101897
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgggatg 193  Q
    ||||||||||||||||||||||||||||||||||    
T  101930 tagaattcaccttataaggtgaataagtgggatg 101897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 3179435 - 3179393
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  3179435 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 3179393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 8234776 - 8234818
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  8234776 tagcctagtggcta--gaattcaccttataaggtgaataagtggg 8234818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 22538650 - 22538610
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtg 188  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  22538650 tagcctagtggcta--gaattcaccttataaggtgaataagtg 22538610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 3037618 - 3037648
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  3037618 tagaattcaccttataaggtgaataagtggg 3037648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 11133175 - 11133145
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  11133175 tagaattcaccttataaggtgaataagtggg 11133145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 18209919 - 18209962
Alignment:
Q  140 gttagatagcctagtggctatagaattcaccttataaggtgaataa 185  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||||    
T  18209919 gttaggtagcctagtggctata--attcaccttataaggtgaataa 18209962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 30474191 - 30474221
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  30474191 tagaattcaccttataaggtgaataagtggg 30474221  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 34018066 - 34018096
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  34018066 tagaattcaccttataaggtgaataagtggg 34018096  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 580767 - 580809
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  ||||||| |||||||||||||||||||||    
T  580767 tagcctagtggcta--gaattcatcttataaggtgaataagtggg 580809  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 1836702 - 1836660
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagt 187  Q
    |||||||||||||||||  |||||||||||||| |||||||||||    
T  1836702 agatagcctagtggcta--gaattcaccttatatggtgaataagt 1836660  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 189
Target Start/End: Original strand, 2557579 - 2557608
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgg 189  Q
    ||||||||||||||||||||||||||||||    
T  2557579 tagaattcaccttataaggtgaataagtgg 2557608  T

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Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 11837106 - 11837060
Alignment:
Q  140 gttagatagcctagtggctatagaattcaccttataaggtgaataagtg 188  Q
    ||||| ||||||||||||||  |||||||| ||||||||||||||||||    
T  11837106 gttaggtagcctagtggcta--gaattcactttataaggtgaataagtg 11837060  T

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Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 16028104 - 16028137
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgggatg 193  Q
    ||||||||||||||||| ||||||||||||||||    
T  16028104 tagaattcaccttataaagtgaataagtgggatg 16028137  T

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Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 17154760 - 17154718
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||||||||||||  ||| |||||||||||||||||||||||||    
T  17154760 tagcctagtggcta--gaactcaccttataaggtgaataagtggg 17154718  T

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Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 20533856 - 20533823
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgggatg 193  Q
    ||||||| ||||||||||||||||||||||||||    
T  20533856 tagaatttaccttataaggtgaataagtgggatg 20533823  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 20122459 - 20122500
Alignment:
Q  146 tagcctagtggctatagaattcaccttataaggtgaataagtgg 189  Q
    ||||||||||||||  |||||||||||||||| |||||||||||    
T  20122459 tagcctagtggcta--gaattcaccttataagatgaataagtgg 20122500  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 188
Target Start/End: Complemental strand, 20684063 - 20684035
Alignment:
Q  160 tagaattcaccttataaggtgaataagtg 188  Q
    |||||||||||||||||||||||||||||    
T  20684063 tagaattcaccttataaggtgaataagtg 20684035  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 44721685 - 44721730
Alignment:
Q  143 agatagcctagtggctatagaattcaccttataaggtgaataagtggg 190  Q
    ||||| |||||||||||  |||||||||||||||||||||||| ||||    
T  44721685 agataacctagtggcta--gaattcaccttataaggtgaataaatggg 44721730  T

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Target: scaffold2098 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold2098
Description:

Target: scaffold2098; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 610 - 640
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  610 tagaattcaccttataaggtgaataagtggg 640  T

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Target: scaffold1990 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 993 - 963
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  993 tagaattcaccttataaggtgaataagtggg 963  T

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Target: scaffold0229 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Complemental strand, 22522 - 22492
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  22522 tagaattcaccttataaggtgaataagtggg 22492  T

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Target: scaffold0092 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 190
Target Start/End: Original strand, 47313 - 47343
Alignment:
Q  160 tagaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||||    
T  47313 tagaattcaccttataaggtgaataagtggg 47343  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 193
Target Start/End: Original strand, 133116 - 133146
Alignment:
Q  163 aattcaccttataaggtgaataagtgggatg 193  Q
    |||||||||||||||||||||||||||||||    
T  133116 aattcaccttataaggtgaataagtgggatg 133146  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 185508 - 185541
Alignment:
Q  160 tagaattcaccttataaggtgaataagtgggatg 193  Q
    |||||||||||||||||| |||||||||||||||    
T  185508 tagaattcaccttataagatgaataagtgggatg 185541  T

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Target: scaffold1086 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 190
Target Start/End: Complemental strand, 2585 - 2557
Alignment:
Q  162 gaattcaccttataaggtgaataagtggg 190  Q
    |||||||||||||||||||||||||||||    
T  2585 gaattcaccttataaggtgaataagtggg 2557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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