View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1077_low_65 (Length: 254)

Name: NF1077_low_65
Description: NF1077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1077_low_65
NF1077_low_65
[»] chr7 (68 HSPs)
chr7 (88-225)||(21875027-21875163)
chr7 (12-88)||(31711920-31711996)
chr7 (12-89)||(33224834-33224911)
chr7 (13-89)||(35293127-35293203)
chr7 (12-65)||(35586756-35586809)
chr7 (34-92)||(3937127-3937185)
chr7 (34-87)||(7817650-7817703)
chr7 (51-92)||(16980293-16980334)
chr7 (12-65)||(37899196-37899249)
chr7 (12-65)||(37899358-37899411)
chr7 (41-89)||(3293140-3293188)
chr7 (34-90)||(11352979-11353035)
chr7 (12-94)||(37351976-37352056)
chr7 (14-92)||(2469699-2469777)
chr7 (51-89)||(33180744-33180782)
chr7 (16-90)||(41985088-41985162)
chr7 (34-87)||(3062343-3062396)
chr7 (51-87)||(46812939-46812975)
chr7 (51-90)||(13729724-13729763)
chr7 (34-89)||(47078256-47078311)
chr7 (35-89)||(25887593-25887647)
chr7 (51-89)||(37899322-37899360)
chr7 (34-100)||(44303914-44303980)
chr7 (51-88)||(21023151-21023188)
chr7 (26-87)||(38547288-38547349)
chr7 (34-94)||(2323298-2323358)
chr7 (34-90)||(22330637-22330693)
chr7 (51-91)||(41893912-41893952)
chr7 (41-93)||(42926147-42926199)
chr7 (51-90)||(11564891-11564930)
chr7 (49-88)||(21347337-21347376)
chr7 (51-90)||(21559796-21559835)
chr7 (14-89)||(24380707-24380782)
chr7 (14-93)||(26041316-26041395)
chr7 (51-90)||(35192308-35192347)
chr7 (15-90)||(37856152-37856227)
chr7 (51-94)||(39331979-39332022)
chr7 (51-94)||(47098945-47098988)
chr7 (55-93)||(21822637-21822675)
chr7 (51-89)||(28036743-28036781)
chr7 (49-90)||(28862102-28862143)
chr7 (12-65)||(31445352-31445405)
chr7 (51-92)||(34855577-34855618)
chr7 (51-92)||(39231762-39231803)
chr7 (12-65)||(41018698-41018751)
chr7 (51-88)||(41080126-41080163)
chr7 (12-65)||(41189527-41189580)
chr7 (51-88)||(42663084-42663121)
chr7 (51-88)||(43573577-43573614)
chr7 (16-65)||(44496790-44496839)
chr7 (52-92)||(156017-156057)
chr7 (34-86)||(237026-237078)
chr7 (55-87)||(3343368-3343400)
chr7 (14-58)||(5724079-5724123)
chr7 (34-90)||(5905971-5906027)
chr7 (14-90)||(6822519-6822595)
chr7 (51-87)||(19786113-19786149)
chr7 (51-91)||(24700118-24700158)
chr7 (14-94)||(25200357-25200436)
chr7 (40-92)||(26749013-26749064)
chr7 (26-62)||(27688674-27688710)
chr7 (12-88)||(37832450-37832526)
chr7 (51-91)||(41402504-41402544)
chr7 (14-90)||(41989728-41989803)
chr7 (28-88)||(43444635-43444695)
chr7 (12-92)||(43942645-43942724)
chr7 (51-91)||(44184593-44184633)
chr7 (41-89)||(45420073-45420121)
[»] chr2 (73 HSPs)
chr2 (12-94)||(6646829-6646911)
chr2 (12-94)||(32972890-32972972)
chr2 (12-91)||(2971798-2971877)
chr2 (12-88)||(6511540-6511616)
chr2 (34-89)||(22353181-22353236)
chr2 (13-91)||(44821944-44822023)
chr2 (40-90)||(3012857-3012907)
chr2 (34-89)||(42678760-42678815)
chr2 (50-87)||(1836014-1836051)
chr2 (34-91)||(10711733-10711790)
chr2 (12-65)||(33045578-33045631)
chr2 (34-95)||(42866755-42866816)
chr2 (51-92)||(44254595-44254636)
chr2 (14-94)||(4263850-4263929)
chr2 (51-91)||(30977886-30977926)
chr2 (51-95)||(39449151-39449195)
chr2 (34-90)||(40937069-40937125)
chr2 (15-83)||(44018068-44018136)
chr2 (51-90)||(4299560-4299599)
chr2 (14-89)||(15141472-15141547)
chr2 (34-89)||(26277106-26277161)
chr2 (34-92)||(27329115-27329173)
chr2 (51-89)||(35589421-35589459)
chr2 (51-89)||(36802895-36802933)
chr2 (26-88)||(38600825-38600887)
chr2 (51-92)||(670501-670542)
chr2 (51-92)||(2841830-2841871)
chr2 (34-87)||(23352910-23352963)
chr2 (55-92)||(29711975-29712012)
chr2 (13-65)||(9194464-9194516)
chr2 (12-88)||(25801797-25801873)
chr2 (34-90)||(29795445-29795501)
chr2 (51-91)||(39449264-39449304)
chr2 (34-90)||(42607536-42607592)
chr2 (62-93)||(7552549-7552580)
chr2 (51-86)||(14233753-14233788)
chr2 (51-90)||(14954633-14954672)
chr2 (55-94)||(18723588-18723627)
chr2 (51-94)||(20911795-20911838)
chr2 (47-86)||(36103154-36103193)
chr2 (34-85)||(42372494-42372545)
chr2 (40-90)||(7485457-7485507)
chr2 (51-85)||(9194432-9194466)
chr2 (51-93)||(27307265-27307307)
chr2 (40-90)||(33737345-33737395)
chr2 (55-97)||(44712027-44712069)
chr2 (40-89)||(285481-285530)
chr2 (41-90)||(1095849-1095898)
chr2 (55-92)||(2013323-2013360)
chr2 (51-88)||(6999102-6999139)
chr2 (51-88)||(12889866-12889903)
chr2 (51-88)||(13765400-13765437)
chr2 (51-88)||(19316599-19316636)
chr2 (51-96)||(28481773-28481818)
chr2 (51-88)||(29051687-29051724)
chr2 (31-88)||(35792642-35792699)
chr2 (49-90)||(37085242-37085283)
chr2 (51-88)||(37257449-37257486)
chr2 (51-88)||(38560678-38560715)
chr2 (28-65)||(42532738-42532775)
chr2 (51-91)||(1352385-1352425)
chr2 (60-96)||(2688674-2688710)
chr2 (28-92)||(8482232-8482296)
chr2 (55-87)||(13347853-13347885)
chr2 (41-89)||(14891102-14891150)
chr2 (51-91)||(28679313-28679353)
chr2 (55-91)||(29684650-29684686)
chr2 (34-90)||(30996737-30996793)
chr2 (41-89)||(33780408-33780456)
chr2 (14-66)||(33857250-33857302)
chr2 (34-90)||(36212064-36212120)
chr2 (49-93)||(39430660-39430704)
chr2 (34-90)||(42081046-42081102)
[»] chr8 (71 HSPs)
chr8 (12-88)||(35356151-35356227)
chr8 (11-93)||(37656996-37657078)
chr8 (12-87)||(32954853-32954928)
chr8 (12-65)||(3946275-3946328)
chr8 (34-90)||(30439511-30439567)
chr8 (34-92)||(41541865-41541923)
chr8 (13-94)||(40413334-40413415)
chr8 (41-89)||(42569741-42569789)
chr8 (28-90)||(888256-888318)
chr8 (34-91)||(14710899-14710956)
chr8 (26-90)||(37392126-37392190)
chr8 (26-94)||(45081074-45081142)
chr8 (34-89)||(7586167-7586222)
chr8 (12-91)||(11789807-11789886)
chr8 (34-88)||(1796496-1796550)
chr8 (51-89)||(17775463-17775501)
chr8 (34-100)||(20219402-20219468)
chr8 (41-91)||(42885984-42886034)
chr8 (54-91)||(5277741-5277778)
chr8 (51-92)||(5771910-5771951)
chr8 (51-88)||(7592849-7592886)
chr8 (51-88)||(14707378-14707415)
chr8 (51-88)||(16872190-16872227)
chr8 (51-92)||(29440556-29440597)
chr8 (51-88)||(29991412-29991449)
chr8 (51-88)||(34718115-34718152)
chr8 (51-96)||(36064022-36064067)
chr8 (34-87)||(39211054-39211107)
chr8 (12-65)||(44064392-44064445)
chr8 (31-91)||(154314-154374)
chr8 (51-99)||(3441160-3441208)
chr8 (14-66)||(12959971-12960023)
chr8 (34-94)||(20174681-20174741)
chr8 (34-98)||(22706246-22706310)
chr8 (12-88)||(34873848-34873924)
chr8 (51-91)||(41600306-41600346)
chr8 (51-90)||(4658297-4658336)
chr8 (34-89)||(7010684-7010739)
chr8 (14-88)||(6243045-6243119)
chr8 (34-88)||(6968238-6968292)
chr8 (34-92)||(7325722-7325780)
chr8 (51-85)||(9549233-9549267)
chr8 (52-90)||(11223894-11223932)
chr8 (51-89)||(16966784-16966822)
chr8 (31-65)||(29440524-29440558)
chr8 (51-89)||(32843974-32844012)
chr8 (12-90)||(41639783-41639861)
chr8 (28-65)||(67160-67197)
chr8 (51-88)||(1633924-1633961)
chr8 (51-92)||(5772006-5772047)
chr8 (51-88)||(12707149-12707186)
chr8 (12-65)||(25830229-25830282)
chr8 (55-92)||(34473945-34473982)
chr8 (12-65)||(35067195-35067248)
chr8 (51-92)||(36110134-36110175)
chr8 (12-65)||(38675638-38675691)
chr8 (51-88)||(39453441-39453478)
chr8 (16-65)||(40528783-40528832)
chr8 (12-65)||(43715909-43715962)
chr8 (55-88)||(45529284-45529317)
chr8 (41-89)||(5502370-5502418)
chr8 (51-87)||(6806909-6806945)
chr8 (13-65)||(15795024-15795076)
chr8 (49-89)||(16487609-16487649)
chr8 (51-99)||(17492518-17492565)
chr8 (14-66)||(27630930-27630982)
chr8 (28-92)||(29107991-29108055)
chr8 (51-87)||(34591263-34591299)
chr8 (53-89)||(36531594-36531630)
chr8 (62-94)||(40649444-40649476)
chr8 (51-91)||(41520965-41521005)
[»] chr1 (85 HSPs)
chr1 (12-87)||(45065885-45065960)
chr1 (34-88)||(18336158-18336212)
chr1 (34-91)||(8200084-8200141)
chr1 (34-90)||(33358164-33358220)
chr1 (34-89)||(48220149-48220204)
chr1 (26-91)||(40596052-40596117)
chr1 (34-91)||(50797788-50797845)
chr1 (34-90)||(44632538-44632594)
chr1 (34-90)||(50781575-50781631)
chr1 (34-89)||(49241510-49241565)
chr1 (34-88)||(47398457-47398511)
chr1 (14-92)||(48325764-48325842)
chr1 (41-87)||(50882122-50882168)
chr1 (34-87)||(19969567-19969620)
chr1 (44-89)||(48624883-48624928)
chr1 (14-90)||(27687505-27687581)
chr1 (51-87)||(33054122-33054158)
chr1 (51-90)||(1790506-1790545)
chr1 (51-90)||(37588709-37588748)
chr1 (34-97)||(41507200-41507263)
chr1 (34-88)||(16836121-16836175)
chr1 (51-89)||(19442505-19442543)
chr1 (34-88)||(32319314-32319368)
chr1 (14-88)||(40139126-40139200)
chr1 (26-92)||(43612078-43612144)
chr1 (51-88)||(4470348-4470385)
chr1 (51-92)||(30658882-30658923)
chr1 (52-89)||(34254386-34254423)
chr1 (51-88)||(35136844-35136881)
chr1 (40-85)||(36494478-36494523)
chr1 (51-88)||(36577446-36577483)
chr1 (12-93)||(36954666-36954745)
chr1 (51-88)||(44789177-44789214)
chr1 (51-92)||(52362478-52362519)
chr1 (40-88)||(6143695-6143743)
chr1 (51-91)||(15705096-15705136)
chr1 (62-102)||(33125368-33125408)
chr1 (12-88)||(41197912-41197988)
chr1 (41-89)||(44257547-44257595)
chr1 (51-91)||(46911290-46911330)
chr1 (34-90)||(49453489-49453545)
chr1 (42-89)||(4857921-4857968)
chr1 (26-89)||(5975547-5975610)
chr1 (51-90)||(10890080-10890119)
chr1 (51-90)||(11097918-11097957)
chr1 (55-94)||(26159435-26159474)
chr1 (51-94)||(30467560-30467603)
chr1 (51-90)||(46082155-46082194)
chr1 (51-90)||(51286401-51286440)
chr1 (49-91)||(2211213-2211255)
chr1 (51-89)||(2854994-2855032)
chr1 (51-93)||(3603106-3603148)
chr1 (51-89)||(7128117-7128155)
chr1 (51-89)||(8411752-8411790)
chr1 (51-89)||(26585913-26585951)
chr1 (51-89)||(34040534-34040572)
chr1 (51-89)||(43893256-43893294)
chr1 (34-88)||(48872034-48872088)
chr1 (51-88)||(756856-756893)
chr1 (16-89)||(2206201-2206274)
chr1 (26-91)||(4154589-4154654)
chr1 (51-88)||(13489662-13489699)
chr1 (16-88)||(30196724-30196797)
chr1 (51-92)||(37178699-37178740)
chr1 (12-88)||(37690429-37690503)
chr1 (51-92)||(42256456-42256497)
chr1 (34-99)||(45272166-45272231)
chr1 (51-88)||(47820535-47820572)
chr1 (14-87)||(50460698-50460771)
chr1 (43-91)||(611650-611698)
chr1 (51-91)||(902635-902675)
chr1 (51-91)||(7078534-7078574)
chr1 (51-91)||(9011642-9011682)
chr1 (51-91)||(24673066-24673106)
chr1 (40-88)||(29264015-29264063)
chr1 (14-90)||(30414873-30414949)
chr1 (34-90)||(31480125-31480181)
chr1 (51-91)||(32915106-32915146)
chr1 (14-66)||(33669795-33669847)
chr1 (40-88)||(34818056-34818104)
chr1 (34-90)||(42539416-42539472)
chr1 (13-65)||(43893292-43893344)
chr1 (34-90)||(46903479-46903535)
chr1 (51-91)||(48983702-48983742)
chr1 (51-87)||(52714979-52715015)
[»] scaffold0100 (1 HSPs)
scaffold0100 (12-90)||(44784-44862)
[»] chr6 (40 HSPs)
chr6 (12-90)||(28748122-28748200)
chr6 (51-88)||(754472-754509)
chr6 (41-90)||(2943444-2943493)
chr6 (47-88)||(7611495-7611536)
chr6 (34-90)||(5028271-5028327)
chr6 (34-82)||(14699669-14699717)
chr6 (51-91)||(15318222-15318262)
chr6 (51-90)||(33421758-33421797)
chr6 (14-92)||(12441534-12441612)
chr6 (14-90)||(1196056-1196132)
chr6 (51-91)||(5327626-5327666)
chr6 (14-98)||(6158766-6158850)
chr6 (52-88)||(6531218-6531254)
chr6 (51-91)||(8505808-8505848)
chr6 (51-95)||(11635569-11635613)
chr6 (51-91)||(15368857-15368897)
chr6 (51-91)||(15722537-15722577)
chr6 (28-91)||(2060633-2060696)
chr6 (51-94)||(17551413-17551456)
chr6 (51-90)||(24842366-24842405)
chr6 (51-90)||(32459551-32459590)
chr6 (55-93)||(2242060-2242098)
chr6 (51-89)||(18141335-18141373)
chr6 (51-89)||(20822902-20822940)
chr6 (51-85)||(30152564-30152598)
chr6 (28-89)||(9200118-9200179)
chr6 (12-65)||(13423003-13423056)
chr6 (28-93)||(25338077-25338142)
chr6 (49-90)||(30945821-30945862)
chr6 (28-93)||(32644618-32644683)
chr6 (51-88)||(35213595-35213632)
chr6 (51-91)||(2075485-2075525)
chr6 (40-88)||(2163702-2163750)
chr6 (40-88)||(2175335-2175383)
chr6 (51-91)||(3180026-3180066)
chr6 (51-91)||(3339533-3339573)
chr6 (55-83)||(13143420-13143448)
chr6 (49-85)||(14693272-14693308)
chr6 (34-90)||(28041819-28041875)
chr6 (14-90)||(31517166-31517242)
[»] chr4 (85 HSPs)
chr4 (13-100)||(35500784-35500871)
chr4 (34-99)||(43769712-43769777)
chr4 (31-90)||(4949516-4949575)
chr4 (34-90)||(28657446-28657502)
chr4 (34-89)||(31657657-31657712)
chr4 (16-85)||(29974315-29974384)
chr4 (14-94)||(4511819-4511899)
chr4 (34-88)||(17683236-17683290)
chr4 (12-65)||(2401645-2401698)
chr4 (12-65)||(51225508-51225561)
chr4 (51-91)||(13086019-13086059)
chr4 (49-93)||(54802696-54802740)
chr4 (51-90)||(14010152-14010191)
chr4 (51-90)||(22819647-22819686)
chr4 (34-89)||(26718379-26718434)
chr4 (34-89)||(26731007-26731062)
chr4 (26-97)||(28676150-28676221)
chr4 (51-93)||(23822279-23822321)
chr4 (14-88)||(30778250-30778324)
chr4 (34-88)||(39312621-39312675)
chr4 (41-91)||(40590609-40590659)
chr4 (55-93)||(51573670-51573708)
chr4 (28-90)||(55601700-55601762)
chr4 (34-87)||(5386385-5386438)
chr4 (13-66)||(10780066-10780119)
chr4 (13-66)||(10973675-10973728)
chr4 (51-92)||(17475318-17475359)
chr4 (51-88)||(47099022-47099059)
chr4 (51-88)||(51887663-51887700)
chr4 (14-90)||(1868879-1868955)
chr4 (51-87)||(2401611-2401647)
chr4 (40-88)||(17683359-17683407)
chr4 (55-90)||(4915711-4915746)
chr4 (51-101)||(6141812-6141863)
chr4 (51-90)||(9162064-9162103)
chr4 (49-92)||(12138860-12138903)
chr4 (34-85)||(22072263-22072314)
chr4 (51-94)||(27408148-27408191)
chr4 (41-88)||(32365680-32365727)
chr4 (34-89)||(32621637-32621692)
chr4 (15-66)||(35580159-35580210)
chr4 (34-93)||(37731921-37731980)
chr4 (44-87)||(45143688-45143731)
chr4 (44-87)||(45152457-45152500)
chr4 (34-93)||(46686240-46686298)
chr4 (14-89)||(50980601-50980676)
chr4 (34-93)||(52846232-52846291)
chr4 (12-90)||(54036515-54036591)
chr4 (55-93)||(2999107-2999145)
chr4 (40-90)||(5234483-5234533)
chr4 (51-85)||(14527647-14527681)
chr4 (51-93)||(19720675-19720717)
chr4 (51-89)||(30079845-30079883)
chr4 (28-90)||(33093115-33093177)
chr4 (34-88)||(39241307-39241361)
chr4 (55-89)||(39345018-39345052)
chr4 (12-94)||(42490914-42490996)
chr4 (51-93)||(44368236-44368278)
chr4 (51-89)||(46406008-46406046)
chr4 (23-85)||(49241958-49242020)
chr4 (51-92)||(7632496-7632537)
chr4 (51-88)||(14443198-14443235)
chr4 (51-88)||(14451393-14451430)
chr4 (51-88)||(14593828-14593865)
chr4 (55-88)||(21617183-21617216)
chr4 (51-84)||(22491348-22491381)
chr4 (55-88)||(32546395-32546428)
chr4 (51-92)||(33278671-33278712)
chr4 (12-89)||(39605978-39606054)
chr4 (49-90)||(41262650-41262691)
chr4 (51-92)||(41609713-41609754)
chr4 (12-65)||(44257713-44257766)
chr4 (14-90)||(46173548-46173622)
chr4 (51-88)||(51741357-51741394)
chr4 (40-88)||(1840595-1840643)
chr4 (51-91)||(3222986-3223026)
chr4 (51-91)||(5932191-5932231)
chr4 (51-87)||(21014055-21014091)
chr4 (60-92)||(21392566-21392598)
chr4 (51-91)||(23094373-23094413)
chr4 (51-91)||(31221410-31221450)
chr4 (51-91)||(37514166-37514206)
chr4 (51-91)||(38864770-38864810)
chr4 (51-95)||(46566922-46566966)
chr4 (14-66)||(46844227-46844279)
[»] chr3 (69 HSPs)
chr3 (34-100)||(49761307-49761373)
chr3 (34-90)||(1765402-1765458)
chr3 (14-89)||(42962306-42962381)
chr3 (34-92)||(3281721-3281779)
chr3 (51-100)||(30909017-30909066)
chr3 (34-90)||(26672410-26672465)
chr3 (12-85)||(54260187-54260260)
chr3 (51-95)||(33976428-33976472)
chr3 (34-90)||(46094421-46094477)
chr3 (52-91)||(21196121-21196160)
chr3 (34-89)||(47683800-47683855)
chr3 (34-88)||(1337844-1337898)
chr3 (52-90)||(6999167-6999205)
chr3 (34-88)||(9753230-9753284)
chr3 (51-89)||(50207004-50207042)
chr3 (40-90)||(51465925-51465975)
chr3 (40-89)||(21005187-21005236)
chr3 (51-88)||(24482997-24483034)
chr3 (34-91)||(24645365-24645422)
chr3 (12-89)||(28700471-28700548)
chr3 (51-88)||(30567994-30568031)
chr3 (14-90)||(43169741-43169815)
chr3 (14-91)||(50745557-50745634)
chr3 (49-98)||(54195341-54195390)
chr3 (51-91)||(10207007-10207047)
chr3 (14-90)||(23906973-23907049)
chr3 (51-91)||(26996313-26996353)
chr3 (12-88)||(32205607-32205682)
chr3 (20-88)||(37780324-37780392)
chr3 (56-88)||(46574150-46574182)
chr3 (34-94)||(46952943-46953003)
chr3 (51-91)||(47774009-47774049)
chr3 (13-65)||(49021746-49021798)
chr3 (51-91)||(54773788-54773828)
chr3 (51-90)||(31376799-31376838)
chr3 (58-89)||(42683826-42683857)
chr3 (34-101)||(48893341-48893408)
chr3 (14-88)||(28884491-28884565)
chr3 (51-93)||(43333704-43333746)
chr3 (51-89)||(44677518-44677556)
chr3 (49-87)||(48281886-48281924)
chr3 (51-93)||(52454128-52454170)
chr3 (12-94)||(55322700-55322782)
chr3 (51-88)||(2482708-2482745)
chr3 (51-88)||(3347156-3347193)
chr3 (12-65)||(14207241-14207294)
chr3 (12-65)||(14214989-14215042)
chr3 (41-90)||(16675538-16675587)
chr3 (34-91)||(19148999-19149055)
chr3 (51-88)||(29525233-29525270)
chr3 (51-92)||(32767672-32767713)
chr3 (51-88)||(37927239-37927276)
chr3 (51-88)||(45054974-45055011)
chr3 (51-92)||(46019458-46019499)
chr3 (51-88)||(49363285-49363322)
chr3 (40-89)||(50146487-50146536)
chr3 (51-88)||(53718049-53718086)
chr3 (51-88)||(55399999-55400036)
chr3 (51-91)||(7248-7288)
chr3 (16-88)||(3484770-3484842)
chr3 (51-91)||(8254024-8254064)
chr3 (40-76)||(29097565-29097601)
chr3 (26-90)||(29846889-29846953)
chr3 (51-91)||(37508532-37508572)
chr3 (51-91)||(39671132-39671172)
chr3 (51-91)||(49196693-49196733)
chr3 (16-92)||(49361823-49361899)
chr3 (63-95)||(51973413-51973445)
chr3 (34-78)||(52937205-52937249)
[»] chr5 (54 HSPs)
chr5 (12-65)||(8920113-8920166)
chr5 (12-65)||(41173287-41173340)
chr5 (12-64)||(21922128-21922180)
chr5 (34-85)||(1839350-1839401)
chr5 (28-93)||(372720-372785)
chr5 (34-91)||(9226310-9226367)
chr5 (40-93)||(34270334-34270387)
chr5 (34-90)||(3640202-3640258)
chr5 (34-94)||(14206394-14206454)
chr5 (28-88)||(42267357-42267417)
chr5 (51-94)||(8675467-8675510)
chr5 (26-93)||(13734358-13734425)
chr5 (40-90)||(15953056-15953106)
chr5 (51-89)||(22402660-22402698)
chr5 (51-89)||(30640789-30640827)
chr5 (28-89)||(6865787-6865848)
chr5 (51-88)||(9933500-9933537)
chr5 (55-96)||(19840024-19840065)
chr5 (51-88)||(21064260-21064297)
chr5 (13-93)||(33567210-33567288)
chr5 (12-65)||(35473358-35473411)
chr5 (40-96)||(5007743-5007799)
chr5 (14-90)||(9957187-9957263)
chr5 (58-90)||(18511837-18511869)
chr5 (51-90)||(9977117-9977156)
chr5 (51-90)||(14011315-14011354)
chr5 (51-90)||(23126377-23126416)
chr5 (55-93)||(17402960-17402998)
chr5 (54-88)||(21922182-21922216)
chr5 (52-90)||(26660446-26660484)
chr5 (52-90)||(26932038-26932076)
chr5 (40-82)||(31284406-31284448)
chr5 (53-91)||(35075612-35075650)
chr5 (15-64)||(2117611-2117660)
chr5 (51-88)||(4430970-4431007)
chr5 (51-88)||(6517712-6517749)
chr5 (52-89)||(14324003-14324040)
chr5 (35-92)||(14923079-14923135)
chr5 (51-92)||(15267780-15267821)
chr5 (12-65)||(22098290-22098343)
chr5 (55-88)||(25871484-25871517)
chr5 (51-88)||(27440479-27440516)
chr5 (62-91)||(32912035-32912064)
chr5 (26-87)||(33910086-33910147)
chr5 (55-96)||(37700452-37700493)
chr5 (51-88)||(43441738-43441775)
chr5 (17-65)||(6241656-6241704)
chr5 (51-87)||(10649436-10649472)
chr5 (68-96)||(18397219-18397247)
chr5 (51-91)||(19481216-19481256)
chr5 (51-99)||(21155976-21156024)
chr5 (51-91)||(33620605-33620645)
chr5 (40-92)||(42509613-42509665)
chr5 (51-95)||(42699050-42699094)
[»] scaffold0034 (1 HSPs)
scaffold0034 (13-91)||(22575-22665)
[»] scaffold0221 (1 HSPs)
scaffold0221 (51-91)||(8211-8251)
[»] scaffold0054 (1 HSPs)
scaffold0054 (14-90)||(31586-31662)
[»] scaffold0056 (1 HSPs)
scaffold0056 (12-65)||(76603-76656)
[»] scaffold0072 (1 HSPs)
scaffold0072 (12-92)||(14535-14615)
[»] scaffold0321 (1 HSPs)
scaffold0321 (51-89)||(19635-19673)
[»] scaffold0136 (1 HSPs)
scaffold0136 (51-89)||(38424-38462)
[»] scaffold0085 (1 HSPs)
scaffold0085 (51-85)||(22888-22922)
[»] scaffold0532 (1 HSPs)
scaffold0532 (51-88)||(10964-11001)
[»] scaffold0471 (1 HSPs)
scaffold0471 (51-92)||(3-44)
[»] scaffold0095 (1 HSPs)
scaffold0095 (51-88)||(16262-16299)
[»] scaffold0005 (1 HSPs)
scaffold0005 (51-88)||(223513-223550)
[»] scaffold0286 (1 HSPs)
scaffold0286 (40-88)||(18659-18707)
[»] scaffold0155 (1 HSPs)
scaffold0155 (30-94)||(3273-3337)
[»] scaffold0041 (1 HSPs)
scaffold0041 (16-64)||(34443-34491)


Alignment Details
Target: chr7 (Bit Score: 114; Significance: 6e-58; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 88 - 225
Target Start/End: Original strand, 21875027 - 21875163
Alignment:
Q  88 cttttttattttagggaactaagatttaaacctaacaccgaaaggattttaggtcttgatcttaaccaactgagctagttaaaaatcaactgttatgatg 187  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21875027 cttttttattttagggaaccaagatttaaacctaacaccgaaaggattttaggtcttgatcttaatcaactgagctagttaaaaatcaactgttatgatg 21875126  T
Q  188 tcatattaaatatttatacacattttttccgaaatttt 225  Q
    |||||||||||||||||||   ||||||||||||||||    
T  21875127 tcatattaaatatttatac-ttttttttccgaaatttt 21875163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 31711920 - 31711996
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31711920 agagagagaaaatgaaaatatgatgtgagtatgagaaagaaagttgtcacaaaatgaatattcaaatatcatttctc 31711996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 33224911 - 33224834
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  33224911 agagagagaaaatgagaatatgatgtgagtatgagagagaaagttgtcacaaaatagatgttcaaatatcatttctct 33224834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 35293203 - 35293127
Alignment:
Q  13 gagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| |||||||| ||||||||||| |||| |||||||||||||||| |||||| |||||||||||||||||||||    
T  35293203 gagagggaaaatgaaaatatgatgtgagtataagaaagaaagttgtcaaaaaatggatgttcaaatatcatttctct 35293127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 35586756 - 35586809
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  35586756 agagagagaaaatgagaatatgatgtgagtatgagagagaaagttgtcacaaaa 35586809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 3937127 - 3937185
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||| |||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  3937127 atgtgagtatgagagagaaagttgtcacaaaatagatgttcaaatatcatttctctttt 3937185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 7817703 - 7817650
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  7817703 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 7817650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 16980334 - 16980293
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16980334 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 16980293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 37899196 - 37899249
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||||||||||||||||||  |||||||| |||||||||||||||||    
T  37899196 agagagagaaaatgagaatatgatgtaagtatgagagagaaagttgtcacaaaa 37899249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 37899411 - 37899358
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||||||||||||||||||| |||||||| | |||||||||||||||    
T  37899411 agagagagaaaatgagaatatgatgtgagtatgagagataaagttgtcacaaaa 37899358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 3293188 - 3293140
Alignment:
Q  41 tatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  3293188 tatgagagagaaagttgtcaccaaatgaatgttcaaatatcatttctct 3293140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 11352979 - 11353035
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  11352979 atgtgagtatgagagagaaagttgtcacaaaattgatgttcaaatatcatttctctt 11353035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 37351976 - 37352056
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    |||||||||| | |||||||  ||||| |||||||| |||||||||||||||| ||  ||| |||||||||||||||||||||    
T  37351976 agagagagaataagagaata--atgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctctttttt 37352056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 2469777 - 2469699
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||| ||| ||||||  ||||| |||||||| |||||||||||||||| ||  ||| |||||||||||||||||||    
T  2469777 agagagagaataagaatacaatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctctttt 2469699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 33180744 - 33180782
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33180744 aaagttgtcacaaaatgaatgttcaaatatcatttctct 33180782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 41985088 - 41985162
Alignment:
Q  16 agagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||| |||  || ||||| |||||||| |||||||||||||||| ||| ||| |||||||||||||||||    
T  41985088 agagaaaataagagaataatgtgagtatgagagagaaagttgtcacaaattgattgtacaaatatcatttctctt 41985162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 3062396 - 3062343
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||| |||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  3062396 atgtgagtataagagagaaagttgtcacaaaatggatgttcaaatatcatttct 3062343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 46812939 - 46812975
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    |||||||||||||||||||||||||||||||||||||    
T  46812939 aaagttgtcacaaaatgaatgttcaaatatcatttct 46812975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 13729763 - 13729724
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  13729763 aaagttgtcacaaaatggatgttcaaatatcatttctctt 13729724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 47078256 - 47078311
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| |||||||| |||||||||||| |||||  |||||||||||||||||||||    
T  47078256 atgtgagtatgagagagaaagttgtcataaaatagatgttcaaatatcatttctct 47078311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 25887647 - 25887593
Alignment:
Q  35 tgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||| |||||||| |||||||||||||||| || |||| ||||||||||||||||    
T  25887647 tgtgagtatgagagagaaagttgtcacaaagtggatgtacaaatatcatttctct 25887593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 37899360 - 37899322
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  37899360 aaagttgtcacaaaatggatgttcaaatatcatttctct 37899322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 44303980 - 44303914
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttttatttta 100  Q
    ||||| |||||||| | ||||||||||| ||||| |||||||||||| ||| ||||||||| |||||    
T  44303980 atgtgagtatgagataaaaagttgtcaccaaatggatgttcaaatatgattactcttttttttttta 44303914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 21023151 - 21023188
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  21023151 aaagttgtcactaaatgaatgttcaaatatcatttctc 21023188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 38547288 - 38547349
Alignment:
Q  26 agaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||||| ||||| ||||||||||||||||||||| |||||   ||| ||||||||||||||    
T  38547288 agaatataatgtgagtatgagaaagaaagttgtcaaaaaatagttgtacaaatatcatttct 38547349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 2323358 - 2323298
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||| |||||||| |||||||||||| |||||   ||| |||||||||||||||||||||    
T  2323358 atgtgagtatgagagagaaagttgtcataaaattgttgtacaaatatcatttctctttttt 2323298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 22330637 - 22330693
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| |||||||||||||||| ||  ||| |||||||||||||||||    
T  22330637 atgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctctt 22330693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 41893952 - 41893912
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  41893952 aaagttgtcataaaatggatgttcaaatatcatttctcttt 41893912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 42926199 - 42926147
Alignment:
Q  41 tatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||||| ||||||||||||| |||| ||| ||||||||||||||||| ||||    
T  42926199 tatgagagagaaagttgtcaccaaataaatattcaaatatcatttctcatttt 42926147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 11564930 - 11564891
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  11564930 aaagttgtcacaaaataaatgttcaaatatcatttatctt 11564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 21347337 - 21347376
Alignment:
Q  49 agaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  21347337 agaaagttgtcacaaaatggatcttcaaatatcatttctc 21347376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 21559835 - 21559796
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  21559835 aaagttgtcacagaatggatgttcaaatatcatttctctt 21559796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 24380707 - 24380782
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||| ||| |||| || ||||| |||||||||||||||||||   ||||||  ||| ||||||||||||||||    
T  24380707 agagagagaataagaagataatgtgagtatgagaaagaaagttgtataaaaatggttgtacaaatatcatttctct 24380782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 26041395 - 26041316
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||||| ||| |||| || ||||| |||||| | |||||||||||| ||||||  ||| | ||||||||||||||||||    
T  26041395 agagagagaataagaacatcatgtgagtatgaaagagaaagttgtcataaaatggttgtacgaatatcatttctcttttt 26041316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 35192308 - 35192347
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  35192308 aaagttgtcacaaaatggatgttcaaatattatttctctt 35192347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 37856152 - 37856227
Alignment:
Q  15 gagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||| ||| ||| ||| ||||| ||||| || | |||||||||||||||||  ||| |||||||||||||||||    
T  37856152 gagagagaataagagtataatgtgagtatgtgagataaagttgtcacaaaatggttgtacaaatatcatttctctt 37856227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 39332022 - 39331979
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||||||||| ||||| |||||||||||||||||||| |||||    
T  39332022 aaagttgtcactaaatggatgttcaaatatcatttctcattttt 39331979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 47098988 - 47098945
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    |||||||||| | |||||||||| ||||||||||||||||||||    
T  47098988 aaagttgtcaaataatgaatgtttaaatatcatttctctttttt 47098945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 21822637 - 21822675
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  21822637 ttgtcacaaaatagatgttcaaatatcatttctcttttt 21822675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 28036781 - 28036743
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  28036781 aaagttgtcacaacatgaatgttcaaatattatttctct 28036743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 28862102 - 28862143
Alignment:
Q  49 agaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||||| |||||| |||| |||||||||||||||||    
T  28862102 agaaagttgtcataaaatggatgtacaaatatcatttctctt 28862143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 31445405 - 31445352
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||| | | ||||| ||||| |||||| |||||||||||||||||||    
T  31445405 agagagagaaagtaaaaatataatgtgagtatgaaaaagaaagttgtcacaaaa 31445352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 34855577 - 34855618
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||| |||||| ||||||||| ||||||||||||||||||    
T  34855577 aaagttatcacaacatgaatgtttaaatatcatttctctttt 34855618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 39231762 - 39231803
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||||||| || || ||||||||||||||||||||||||    
T  39231762 aaagttgtcactaactggatgttcaaatatcatttctctttt 39231803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 41018751 - 41018698
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||| | | ||||| ||||| |||||||| |||||||||||||||||    
T  41018751 agagagagaaagtaaaaatataatgtgagtatgagatagaaagttgtcacaaaa 41018698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 41080163 - 41080126
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  41080163 aaagttgtcacaaaatgattgtacaaatatcatttctc 41080126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 41189527 - 41189580
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||| | | || || ||||| ||||||||||||||||||||||||||    
T  41189527 agagagagaaagtaaaaagataatgtgagtatgagaaagaaagttgtcacaaaa 41189580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 42663121 - 42663084
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  42663121 aaagttgtcacaaaatggatgtacaaatatcatttctc 42663084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 43573577 - 43573614
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  43573577 aaagttgtcacaaaatagatgttcaaatatcatttctc 43573614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 44496790 - 44496839
Alignment:
Q  16 agagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||| | ||||| ||||| |||||||| |||||||||||||||||    
T  44496790 agagaaaataataatataatgtgagtatgagagagaaagttgtcacaaaa 44496839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 156017 - 156057
Alignment:
Q  52 aagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||||||||| || |||| |||||||||||||||||||    
T  156017 aagttgtcacaaagtggatgtacaaatatcatttctctttt 156057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 237078 - 237026
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttc 86  Q
    ||||| |||||||| | |||||||||||||| ||| ||| |||||||||||||    
T  237078 atgtgagtatgagagataaagttgtcacaaattgattgtacaaatatcatttc 237026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Original strand, 3343368 - 3343400
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    |||||| ||||||||||||||||||||||||||    
T  3343368 ttgtcataaaatgaatgttcaaatatcatttct 3343400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 5724123 - 5724079
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgt 58  Q
    ||||||||||| ||||||| ||||| |||||||| ||||||||||    
T  5724123 agagagaaaataagaatataatgtgagtatgagagagaaagttgt 5724079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 5905971 - 5906027
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| |||||||| |  |||||||| ||| |||||||||||||||||    
T  5905971 atgtgagtatgagagagaaagttataccaaaatgattgtacaaatatcatttctctt 5906027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 6822519 - 6822595
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||| ||| |||| || ||||| |||||||| | |||||||| | ||||||  ||| |||||||||||||||||    
T  6822519 agagagagaataagaagataatgtgagtatgagagaaaaagttgttagaaaatggttgtacaaatatcatttctctt 6822595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 19786113 - 19786149
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  19786113 aaagttgtcactaaatggatgttcaaatatcatttct 19786149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 24700158 - 24700118
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||| ||||||||| ||| ||||||||||||||||||    
T  24700158 aaagttgttacaaaatgattgtacaaatatcatttctcttt 24700118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 25200357 - 25200436
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||| ||||||| ||||| ||||  |||||||||| ||| |||||||||| ||  ||| ||||||||||||||| |||||    
T  25200357 agagataaaatgaaaatataatgtaagtatgagaaaaaaa-ttgtcacaaattggttgtacaaatatcatttctcattttt 25200436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 26749064 - 26749013
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||||| |||||||||||| ||| ||  |||||||||||||||||||||||    
T  26749064 gtatgagagagaaagttgtcaaaaattgt-tgttcaaatatcatttctctttt 26749013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 27688710 - 27688674
Alignment:
Q  26 agaatatgatgtgggtatgagaaagaaagttgtcaca 62  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  27688710 agaatataatgtgagtatgagaaagaaagttgtcaca 27688674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 37832526 - 37832450
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||| |||| |  ||||| |||||||| | | ||||||||||||||   ||| |||||||||||||||    
T  37832526 agagagagaaaataagaacacaatgtgagtatgagagaaagagttgtcacaaaatagttgtacaaatatcatttctc 37832450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 41402544 - 41402504
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||| ||||| || ||||||||||||||||||||    
T  41402544 aaagttgtcactaaatggatattcaaatatcatttctcttt 41402504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 41989728 - 41989803
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||| | | ||||| ||||| |||||||| |||||||||| | ||||||  |||| ||||||||||||||||    
T  41989728 agagagaaagtaaaaatataatgtgagtatgagagagaaagttgtaa-aaaatggttgttaaaatatcatttctctt 41989803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 43444695 - 43444635
Alignment:
Q  28 aatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||  |||||||| |||||||||||| ||| ||  ||| |||||||||||||||    
T  43444695 aatatgatgtaagtatgagagagaaagttgtcataaagtggttgtacaaatatcatttctc 43444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 43942724 - 43942645
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||||||| | | || || ||||| |||||||| |||||||||| | |||||   |||||||||||||||||||||||    
T  43942724 agagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtaa-aaaatagttgttcaaatatcatttctctttt 43942645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 44184593 - 44184633
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||| ||||||  |||||||||||||||||||||||    
T  44184593 aaagttgtcgcaaaatagatgttcaaatatcatttctcttt 44184633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 45420073 - 45420121
Alignment:
Q  41 tatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||| |||||||||||| |||||   ||||||||||||||||||||    
T  45420073 tatgagagagaaagttgtcaaaaaatagttgttcaaatatcatttctct 45420121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 6646911 - 6646829
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  6646911 agagagagaaaatgagaatatgatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctttttt 6646829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 32972890 - 32972972
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  32972890 agagagagaaaatgagaatatgatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttatctttttt 32972972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 2971798 - 2971877
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||||||||||| ||||||||||||| |||||||||    
T  2971798 agagagagaaaatgagaatatgatatgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcttttctcttt 2971877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 6511540 - 6511616
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||||||| ||||   ||||||| ||||| ||||||||||||| |||| |||||||||||||||    
T  6511540 agagagagaaaatgagaatataatgtaaatatgagagagaaaattgtcacaaaatggatgtccaaatatcatttctc 6511616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 22353181 - 22353236
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  22353181 atgtgagtatgagaaagaaagttgtcacaaaatgattgtacaaatatcatttctct 22353236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 44821944 - 44822023
Alignment:
Q  13 gagagagaaaatgagaatatgatgtgggtatgag-aaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||||||| ||||||||||| ||||||| ||| |||||| |||||||||  ||||||||||||||||| |||||    
T  44821944 gagagagaaaatgaaaatatgatgtgagtatgagaaaaaaaagttatcacaaaatagatgttcaaatatcatttatcttt 44822023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 3012857 - 3012907
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  3012857 gtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 3012907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 42678815 - 42678760
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| |||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  42678815 atgtgagtatgagagagaaagttgtcactaaatggatgttcaaatatcatttctct 42678760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 87
Target Start/End: Complemental strand, 1836051 - 1836014
Alignment:
Q  50 gaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1836051 gaaagttgtcacaaaatgaatgttcaaatatcatttct 1836014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 10711790 - 10711733
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||| |||||||| ||||| ||||||||||||  |||||||||||||||||||||||    
T  10711790 atgtgagtatgagagagaaaattgtcacaaaatagatgttcaaatatcatttctcttt 10711733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 33045631 - 33045578
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  33045631 agagaaagaaaatgagaatatgatgtgagtatgagagagaaagttgttacaaaa 33045578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 42866816 - 42866755
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttta 95  Q
    ||||| |||||||| | ||||||||||||||||| | |||||||||||||||||| ||||||    
T  42866816 atgtgagtatgagagaaaaagttgtcacaaaatggacgttcaaatatcatttctccttttta 42866755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 44254636 - 44254595
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  44254636 aaagttgtcacagaatgaatgttcaaatatcatttctctttt 44254595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 4263850 - 4263929
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||||||| | ||||||| ||||| |||||| | |||||||||||| ||||||  ||| |||||||||||||||||||||    
T  4263850 agagagaaagtaagaatataatgtgagtatgaaagagaaagttgtcaaaaaatg-ttgtacaaatatcatttctctttttt 4263929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 30977926 - 30977886
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  30977926 aaagttgtcacaaaatggatgttcaaatatcatttctcttt 30977886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 39449151 - 39449195
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttttta 95  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||    
T  39449151 aaagttgtcacaaaatggatgttcaaatatcatttctctatttta 39449195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 40937069 - 40937125
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| |||||||| |||||||||| |||||||||| |||||||||||    
T  40937069 atgtgagtatgagagagaaagttatcacaaaatggatgttcaaatgtcatttctctt 40937125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 44018136 - 44018068
Alignment:
Q  15 gagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcat 83  Q
    ||||||||||||||| |||||||| |||||||  | |||||||||||||||||  ||| ||||||||||    
T  44018136 gagagaaaatgagaacatgatgtgagtatgagtgaaaaagttgtcacaaaatggttgtacaaatatcat 44018068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 4299560 - 4299599
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  4299560 aaagttgtcacaaaatgaatgttcaaatatcatttatctt 4299599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 15141547 - 15141472
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||| ||| ||| ||| ||||| |||||||| |||||||||||| |||||  |||| ||||||||||||||||    
T  15141547 agagagagaataagagtataatgtgagtatgagagagaaagttgtcataaaatagatgtacaaatatcatttctct 15141472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 26277161 - 26277106
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| |||| ||| ||||||||||||| ||||| |||||||||||||||||||||    
T  26277161 atgtgagtataagagagaaagttgtcactaaatggatgttcaaatatcatttctct 26277106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 27329115 - 27329173
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||| ||||||||| ||||||||||  |||||||| ||| |||||||||||||||||||    
T  27329115 atgtaggtatgagagagaaagttgtaccaaaatgattgtacaaatatcatttctctttt 27329173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 35589421 - 35589459
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  35589421 aaagttgtcacaaaatggatgttcaaatatcatttctct 35589459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 36802933 - 36802895
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  36802933 aaagttgtcacaaaatggatgttcaaatatcatttctct 36802895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 38600887 - 38600825
Alignment:
Q  26 agaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||| ||||| |||||||| |||||||||||| |||||| |||| || ||||||||||||    
T  38600887 agaatataatgtgagtatgagagagaaagttgtcaaaaaatggatgtacatatatcatttctc 38600825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 670501 - 670542
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||||||| ||||| ||||||||||||||||||||||||    
T  670501 aaagttgtcactaaatggatgttcaaatatcatttctctttt 670542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 2841871 - 2841830
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  2841871 aaagttgtcacaaaatggatgatcaaatatcatttctctttt 2841830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 23352910 - 23352963
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||| |||||||| |||||||||||||||||||  ||||||| ||||||||||    
T  23352910 atgtgagtatgagagagaaagttgtcacaaaatggctgttcaagtatcatttct 23352963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 29712012 - 29711975
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  29712012 ttgtcacaaaatggatgttcaaatatcatttctctttt 29711975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 9194516 - 9194464
Alignment:
Q  13 gagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    |||||||||||||| ||||| ||||| |||||||| |||||||||||| ||||    
T  9194516 gagagagaaaatgaaaatataatgtgagtatgagagagaaagttgtcataaaa 9194464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 25801797 - 25801873
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||| ||| ||| ||| ||||| |||||||| | |||||||||||||| ||  ||| |||||||||||||||    
T  25801797 agagagagagaataagagtataatgtgagtatgagagataaagttgtcacaaattggttgtacaaatatcatttctc 25801873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 29795501 - 29795445
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| ||||| || |||||||||||||||||||  ||| |||||||||||||||||    
T  29795501 atgtgagtatgtgagagaaagttgtcacaaaatggttgtacaaatatcatttctctt 29795445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 39449304 - 39449264
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  39449304 aaagttgtcacaaaatggatattcaaatatcatttctcttt 39449264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 42607536 - 42607592
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| ||||| |||||||||||| | ||| |||||||||||||||||    
T  42607536 atgtgagtatgagagagaaaattgtcacaaaataattgtacaaatatcatttctctt 42607592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 93
Target Start/End: Complemental strand, 7552580 - 7552549
Alignment:
Q  62 aaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||||||||||||||||||||||||||||||    
T  7552580 aaaatgaatgttcaaatatcatttctcttttt 7552549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 86
Target Start/End: Original strand, 14233753 - 14233788
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttc 86  Q
    ||||||||||||||||| ||||||||||||||||||    
T  14233753 aaagttgtcacaaaatggatgttcaaatatcatttc 14233788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 14954633 - 14954672
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  14954633 aaagttgtcacaaaatgtatgtacaaatatcatttctctt 14954672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 18723627 - 18723588
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  18723627 ttgtcacaaaatggatgttcaaatatcatttctccttttt 18723588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 20911838 - 20911795
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    |||||||| || |||||||||||||||||||||||||| |||||    
T  20911838 aaagttgttaccaaatgaatgttcaaatatcatttctcgttttt 20911795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 36103154 - 36103193
Alignment:
Q  47 aaagaaagttgtcacaaaatgaatgttcaaatatcatttc 86  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  36103154 aaagaaagttgttacaaaatgaatgtttaaatatcatttc 36103193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 42372545 - 42372494
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcattt 85  Q
    ||||| |||||||| ||||||||||||| ||||  |||||||||||||||||    
T  42372545 atgtgagtatgagagagaaagttgtcactaaatagatgttcaaatatcattt 42372494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 7485507 - 7485457
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||| ||||||| |||||||||||| ||  |||||||||||||||||||||    
T  7485507 gtataagaaagacagttgtcacaaagtggttgttcaaatatcatttctctt 7485457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 85
Target Start/End: Complemental strand, 9194466 - 9194432
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcattt 85  Q
    ||||||||||||||||| |||||||||||||||||    
T  9194466 aaagttgtcacaaaatggatgttcaaatatcattt 9194432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 27307265 - 27307307
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  27307265 aaagttgtcacaaattgattgtacaaatatcatttctcttttt 27307307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 33737345 - 33737395
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||| ||||| |||||||||||||   ||||||||||||||||||||    
T  33737345 gtatgagagagaaatttgtcacaaaatggtagttcaaatatcatttctctt 33737395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 44712027 - 44712069
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctcttttttatt 97  Q
    ||||||||||||| ||||||||||||||||||||  |||||||    
T  44712027 ttgtcacaaaatggatgttcaaatatcatttctcaattttatt 44712069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 285481 - 285530
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| || ||||||||||  |||||||||||| ||||||||||||||||    
T  285481 gtatgcgagagaaagttgttccaaaatgaatgtacaaatatcatttctct 285530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 1095849 - 1095898
Alignment:
Q  41 tatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||| ||||| |||||| |||||| |||| |||||||||||||||||    
T  1095849 tatgagagagaaaattgtcataaaatggatgtacaaatatcatttctctt 1095898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 2013323 - 2013360
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  2013323 ttgtcataaaatgaatgtacaaatatcatttctctttt 2013360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 6999102 - 6999139
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  6999102 aaagttgtcataaaatggatgttcaaatatcatttctc 6999139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 12889866 - 12889903
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  12889866 aaagttgtcacaaaatggatgttcatatatcatttctc 12889903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 13765437 - 13765400
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  13765437 aaagttgtcataaaatggatgttcaaatatcatttctc 13765400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 19316599 - 19316636
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||||||||||| | |||||||||||||||||    
T  19316599 aaagttgtcacaaaatgattattcaaatatcatttctc 19316636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 28481818 - 28481773
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttttttat 96  Q
    |||||||||| ||||||  ||||||||||| |||||||||||||||    
T  28481818 aaagttgtcaaaaaatggttgttcaaatattatttctcttttttat 28481773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 29051687 - 29051724
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  29051687 aaagttgtcactaaatggatgttcaaatatcatttctc 29051724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 35792642 - 35792699
Alignment:
Q  31 atgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||| |||||||||| ||| |||| ||||||||  ||| |||||||||||||||    
T  35792642 atgatgtgagtatgagaaaaaaaattgtaacaaaatggttgtacaaatatcatttctc 35792699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 37085242 - 37085283
Alignment:
Q  49 agaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||| ||||| ||||||| |||||||||||||||||    
T  37085242 agaaagttgttacaaattgaatgtacaaatatcatttctctt 37085283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 37257486 - 37257449
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  37257486 aaagttgtcactaaatggatgttcaaatatcatttctc 37257449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 38560715 - 38560678
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  38560715 aaagttgttacaaaatgaatgttaaaatatcatttctc 38560678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 42532738 - 42532775
Alignment:
Q  28 aatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  42532738 aatataatgtgagtatgagaaagaaagttgtcacaaaa 42532775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 1352425 - 1352385
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  1352425 aaagttgtcaaaaattgattgttcaaatatcatttctcttt 1352385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 2688674 - 2688710
Alignment:
Q  60 acaaaatgaatgttcaaatatcatttctcttttttat 96  Q
    |||||||||  ||||||||||||||||||||||||||    
T  2688674 acaaaatgacagttcaaatatcatttctcttttttat 2688710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 8482232 - 8482296
Alignment:
Q  28 aatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||| |||||  ||||||| |||||||||||| ||| ||  ||| |||||||||||||||||||    
T  8482232 aatataatgtgaatatgagagagaaagttgtcataaagtggttgtacaaatatcatttctctttt 8482296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Original strand, 13347853 - 13347885
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||||||||||| |||||||||||||||||||    
T  13347853 ttgtcacaaaatggatgttcaaatatcatttct 13347885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 14891102 - 14891150
Alignment:
Q  41 tatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||||||||||||| |||||||||   ||| ||||||||||||||||    
T  14891102 tatgagaaagaaagttatcacaaaatagttgtacaaatatcatttctct 14891150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 28679353 - 28679313
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||| ||||| |||||||||||| ||||||||||    
T  28679353 aaagttgtcaccaaatggatgttcaaatattatttctcttt 28679313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 29684650 - 29684686
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  29684650 ttgtcactaaataaatgttcaaatatcatttctcttt 29684686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 30996793 - 30996737
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| |||||||||||| ||| | ||||| |||||||||||| ||||    
T  30996793 atgtgagtatgagagagaaagttgtcaaaaagtaaatgtacaaatatcatttatctt 30996737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 33780408 - 33780456
Alignment:
Q  41 tatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||| | |||| |||||||| |||||||||||||| ||||||||    
T  33780408 tatgagaaatatagttatcacaaaacgaatgttcaaatattatttctct 33780456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 33857302 - 33857250
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaat 66  Q
    ||||||| ||| ||||||| ||||| |||||||| |||||||||||| |||||    
T  33857302 agagagagaataagaatatcatgtgagtatgagagagaaagttgtcaaaaaat 33857250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 36212064 - 36212120
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||| | | ||||||||||||||||| ||||||| ||||||||| ||||    
T  36212064 atgtgagtatgaaagataaagttgtcacaaaatggatgttcagatatcatttttctt 36212120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 39430704 - 39430660
Alignment:
Q  49 agaaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    |||||||||||| ||| ||| ||||||||||||||| ||||||||    
T  39430704 agaaagttgtcagaaattgattgttcaaatatcattactcttttt 39430660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 42081102 - 42081046
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| |||||||||||| ||| ||  ||| |||||||||||||||||    
T  42081102 atgtgagtatgagagagaaagttgtcaaaaagtggctgtacaaatatcatttctctt 42081046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 35356151 - 35356227
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  35356151 agagagagaaaatgagaatatgatgtgggtatgagagagaaagttatcacaaaatgaatgttcaaatatcatttctc 35356227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 37657078 - 37656996
Alignment:
Q  11 cagagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||| |||||||||||||||||||||||||    
T  37657078 cagagagagaaaatgagaatatgatgtgagtatgagagagaaagttgtcactaaatggatgttcaaatatcatttctcttttt 37656996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 32954928 - 32954853
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  32954928 agagagagaaaatgagaatatgatgtgagtatcagagagaaagttgtcacaaaatggatgttcaaatatcatttct 32954853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 3946328 - 3946275
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  3946328 agagagagaaaatgagaatatgatgtgagtatgagagagaaagttgtcacaaaa 3946275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 30439511 - 30439567
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  30439511 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 30439567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 41541923 - 41541865
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||| |||| ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  41541923 atgtgagtataagagagaaagttgtcacaaaatggatgttcaaatatcatttctctttt 41541865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 40413334 - 40413415
Alignment:
Q  13 gagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    |||||||||||| |||  || | ||| |||||||| |||||||||||||||||| | ||| |||||||||||||||||||||    
T  40413334 gagagagaaaataagagaataacgtgagtatgagagagaaagttgtcacaaaataattgtacaaatatcatttctctttttt 40413415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 42569741 - 42569789
Alignment:
Q  41 tatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  42569741 tatgagagagaaagttgtcataaaatgaatgttcaaatatcatttctct 42569789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 888256 - 888318
Alignment:
Q  28 aatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||  |||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  888256 aatatcatgtgaatatgagaaagaaagttgtcacaaattggatgtttaaatatcatttctctt 888318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 14710899 - 14710956
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||| |||||||| |||||||||||||||||||| ||| |||||||||||| |||||    
T  14710899 atgtgagtatgagagagaaagttgtcacaaaatgattgtacaaatatcatttatcttt 14710956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 37392126 - 37392190
Alignment:
Q  26 agaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||| ||||| |||||||| |||||||||||| ||||||  ||| |||||||||||||||||    
T  37392126 agaatataatgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctctt 37392190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 45081142 - 45081074
Alignment:
Q  26 agaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||||| |||||  |||||||  ||||||||||| ||||||||||| || ||||||||||||||||||    
T  45081142 agaatataatgtgaatatgagagggaaagttgtcaaaaaatgaatgtacatatatcatttctctttttt 45081074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 7586167 - 7586222
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| |||||| ||||||||||||||| ||||  |||||||||||||||||||||    
T  7586167 atgtgagtatgaaaaagaaagttgtcaccaaatagatgttcaaatatcatttctct 7586222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 11789886 - 11789807
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||| |||  |||||| ||||| |||| |||||||||||||||| ||| ||  ||| ||||||||||||||||||    
T  11789886 agagagagagaatacgaatataatgtgagtataagaaagaaagttgtcataaagtgtttgtacaaatatcatttctcttt 11789807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 1796550 - 1796496
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||| ||||||||||||||||||||||||| ||  ||| |||||||||||||||    
T  1796550 atgtgagtatgagaaagaaagttgtcacaaagtggttgtacaaatatcatttctc 1796496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 17775463 - 17775501
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  17775463 aaagttgtcacaaaatgattgttcaaatatcatttctct 17775501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 20219468 - 20219402
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttttatttta 100  Q
    ||||| |||||||| | ||||||||||| ||||| |||||||||||| ||| ||||||||| |||||    
T  20219468 atgtgagtatgagataaaaagttgtcaccaaatggatgttcaaatatgattactcttttttttttta 20219402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 42886034 - 42885984
Alignment:
Q  41 tatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||||| |||||    
T  42886034 tatgagagagaaagttgtcaccaaatggatgttcaaatatcatttatcttt 42885984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 5277741 - 5277778
Alignment:
Q  54 gttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||||||| |||||||||||||||||||||||    
T  5277741 gttgtcacaaaatggatgttcaaatatcatttctcttt 5277778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 5771910 - 5771951
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  5771910 aaagttgtcacaaaatggttgttcaaatatcatttctctttt 5771951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 7592886 - 7592849
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  7592886 aaagttgtcactaaatgaatgttcaaatatcatttctc 7592849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 14707378 - 14707415
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||| |||||||||||||||||||||||||||    
T  14707378 aaagttgtcaaaaaatgaatgttcaaatatcatttctc 14707415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 16872190 - 16872227
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  16872190 aaagttgtcacaaaatggatgttcaaatatcatttctc 16872227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 29440556 - 29440597
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||| |||| ||||||||||||||||||||||||||||||    
T  29440556 aaagttatcaccaaatgaatgttcaaatatcatttctctttt 29440597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 29991449 - 29991412
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  29991449 aaagttgtcacaaaatggatgttcaaatatcatttctc 29991412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 34718152 - 34718115
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  34718152 aaagttgtcacaaaatggatgttcaaatatcatttctc 34718115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 36064067 - 36064022
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttttttat 96  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||||    
T  36064067 aaagttgtcacaaaatgattgtacaaatatcatttctctattttat 36064022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 39211107 - 39211054
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||| |||||||| |||||||||||| ||||||  ||||||||||||||||||    
T  39211107 atgtgagtatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttct 39211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 44064445 - 44064392
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||||||||||||||||||| |||||| | |||| ||||| ||||||    
T  44064445 agagagagaaaatgagaatatgatgtgagtatgaaagagaaggttgttacaaaa 44064392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 154374 - 154314
Alignment:
Q  31 atgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||| |||||||| |||| ||| ||| ||||||||| | ||||||||||||||||||    
T  154374 atgatgtgtgtatgagagagaaggttatcataaaatgaatatacaaatatcatttctcttt 154314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 3441208 - 3441160
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttttttatttt 99  Q
    |||||| ||||||| | |||||||||||||||||||||||| |||||||    
T  3441208 aaagttatcacaaagtaaatgttcaaatatcatttctctttattatttt 3441160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 12960023 - 12959971
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaat 66  Q
    ||||||| ||| ||||||| ||||| ||||||||||||||||||||| |||||    
T  12960023 agagagagaataagaatataatgtgagtatgagaaagaaagttgtcaaaaaat 12959971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 20174741 - 20174681
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||| |||||||| | ||||||||||| ||||| |||||||||||| ||| |||||||||    
T  20174741 atgtgagtatgagataaaaagttgtcaccaaatggatgttcaaatatgattactctttttt 20174681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 22706246 - 22706310
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttttattt 98  Q
    ||||| |||||||| | ||||||||||| ||||| || ||||||||||||||||| | |||||||    
T  22706246 atgtgagtatgagagataaagttgtcactaaatggatattcaaatatcatttctcatatttattt 22706310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 34873924 - 34873848
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||| | | || || ||||  |||||||||| |||||||||||||||| | |||| ||||||||||||||    
T  34873924 agagagagaaagtaaaaaaataatgttagtatgagaaataaagttgtcacaaaataattgttaaaatatcatttctc 34873848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 41600346 - 41600306
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  41600346 aaagttgtcaataaatgaatgttcaaatatcatttctcttt 41600306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 4658297 - 4658336
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  4658297 aaagttgtcataaaatggatgttcaaatatcatttctctt 4658336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 7010739 - 7010684
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| |||||||| ||||| |||||| ||||||| ||| ||||||||||||||||    
T  7010739 atgtgagtatgagagagaaaattgtcaaaaaatgattgtacaaatatcatttctct 7010684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 6243119 - 6243045
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||| ||| |||| || ||||| |||||||| ||||||||||   ||||||| ||| |||||||||||||||    
T  6243119 agagagagaataagaagataatgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatatcatttctc 6243045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 6968238 - 6968292
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||| |||||||| ||||||||||||| | ||  ||||||||||||||||||||    
T  6968238 atgtgagtatgagagagaaagttgtcaccagattgatgttcaaatatcatttctc 6968292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 7325780 - 7325722
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||| |||||||| |||||||||| | ||| || |||| |||||||||||||||||||    
T  7325780 atgtgagtatgagagagaaagttgttataaagtggatgtacaaatatcatttctctttt 7325722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 9549233 - 9549267
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcattt 85  Q
    ||||||||||||||||| |||||||||||||||||    
T  9549233 aaagttgtcacaaaatggatgttcaaatatcattt 9549267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 11223894 - 11223932
Alignment:
Q  52 aagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  11223894 aagttgtcacaaaatggatgtacaaatatcatttctctt 11223932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 16966822 - 16966784
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  16966822 aaagttgtcactaaatggatgttcaaatatcatttctct 16966784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 65
Target Start/End: Original strand, 29440524 - 29440558
Alignment:
Q  31 atgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    |||||||| ||||||||||||||||||||||||||    
T  29440524 atgatgtgagtatgagaaagaaagttgtcacaaaa 29440558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 32843974 - 32844012
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  32843974 aaagttgtcactaaatgaatgttcaaatataatttctct 32844012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 41639783 - 41639861
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||| | | ||||| ||||| |||||||| | ||| |||| | |||||| |||| |||||||||||||||||    
T  41639783 agagagagaaagtaaaaatataatgtgagtatgagagaaaaaattgttagaaaatggatgtacaaatatcatttctctt 41639861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 67160 - 67197
Alignment:
Q  28 aatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  67160 aatataatgtgggtatgagagagaaagttgtcacaaaa 67197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 1633924 - 1633961
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  1633924 aaagttgtcactaaatggatgttcaaatatcatttctc 1633961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 5772006 - 5772047
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||||||| ||||||  |||||||||||||||||||||||    
T  5772006 aaagttgtcaaaaaatggttgttcaaatatcatttctctttt 5772047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 12707186 - 12707149
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  12707186 aaagttgtcataaaatggatgttcaaatatcatttctc 12707149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 25830229 - 25830282
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||| | | ||||| ||||| |||||||| |||||||||||||||||    
T  25830229 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaa 25830282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 34473982 - 34473945
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  34473982 ttgtcacaaagtgaatgtacaaatatcatttctctttt 34473945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 35067248 - 35067195
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||| | | ||||| ||||| |||||||| |||||||||||||||||    
T  35067248 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaa 35067195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 36110175 - 36110134
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||| |||| ||||| ||||||||||||||||||||||||    
T  36110175 aaagttttcactaaatggatgttcaaatatcatttctctttt 36110134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 38675691 - 38675638
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||| | | ||||| |||||||||||||| |||||||||||| ||||    
T  38675691 agagagagaaagtaaaaatataatgtgggtatgagagagaaagttgtcataaaa 38675638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 39453441 - 39453478
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  39453441 aaagttgtcacaaaatggatgtccaaatatcatttctc 39453478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 40528832 - 40528783
Alignment:
Q  16 agagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    |||||||||||||||||| |||| |||||| | |||||||||||| ||||    
T  40528832 agagaaaatgagaatatgctgtgagtatgaaagagaaagttgtcataaaa 40528783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 43715962 - 43715909
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||| | | ||||| ||||| |||||||| |||||||||||||||||    
T  43715962 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaa 43715909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 88
Target Start/End: Original strand, 45529284 - 45529317
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||| ||||||||||||||||||||||||||    
T  45529284 ttgtcactaaatgaatgttcaaatatcatttctc 45529317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 5502418 - 5502370
Alignment:
Q  41 tatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||| |||||||||||||||| ||  ||| ||||||||||||||||    
T  5502418 tatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctct 5502370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 6806945 - 6806909
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  6806945 aaagttgtcacaaaatgattgtacaaatatcatttct 6806909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 15795024 - 15795076
Alignment:
Q  13 gagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    |||| ||||||||| ||||||||||  |||||||||||||| |||||| ||||    
T  15795024 gagaaagaaaatgaaaatatgatgtaagtatgagaaagaaaattgtcataaaa 15795076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 16487649 - 16487609
Alignment:
Q  49 agaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||||||||| ||||||  ||||||||||||||||||||    
T  16487649 agaaagttgtcataaaatggttgttcaaatatcatttctct 16487609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 17492565 - 17492518
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttttttatttt 99  Q
    |||||||||||||| ||| ||| |||||||||||||| |||||||||||    
T  17492565 aaagttgtcacaaa-tgattgtacaaatatcatttcttttttttatttt 17492518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 27630982 - 27630930
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaat 66  Q
    ||||||| ||| ||||||| ||||| |||||||| |||||||||||| |||||    
T  27630982 agagagagaataagaatataatgtgagtatgagagagaaagttgtcaaaaaat 27630930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 29108055 - 29107991
Alignment:
Q  28 aatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||| ||||| |||| | | |||||||||| | ||||||| ||| |||||||||||||||||||    
T  29108055 aatataatgtgagtataaaagagaaagttgttaaaaaatgattgtacaaatatcatttctctttt 29107991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 34591299 - 34591263
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    |||||||| || |||||||||||||||||||||||||    
T  34591299 aaagttgtgactaaatgaatgttcaaatatcatttct 34591263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 36531630 - 36531594
Alignment:
Q  53 agttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  36531630 agttgtcaccaaatggatgttcaaatatcatttctct 36531594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 40649476 - 40649444
Alignment:
Q  62 aaaatgaatgttcaaatatcatttctctttttt 94  Q
    |||||||||||||||||||||||||||| ||||    
T  40649476 aaaatgaatgttcaaatatcatttctctatttt 40649444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 41521005 - 41520965
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||| |||| ||||| |||||||||||||||||||||||    
T  41521005 aaagttatcactaaatggatgttcaaatatcatttctcttt 41520965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 45065885 - 45065960
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  45065885 agagagagaaaatgagaatatgatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 45065960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 18336212 - 18336158
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18336212 atgtgagtatgagagagaaagttgtcacaaaatgaatgttcaaatatcatttctc 18336158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 8200141 - 8200084
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  8200141 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctcttt 8200084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 33358164 - 33358220
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  33358164 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 33358220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 48220149 - 48220204
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  48220149 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 48220204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 40596052 - 40596117
Alignment:
Q  26 agaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||| ||||| |||||||| |||||||||||||||||||  ||| ||||||||||||||||||    
T  40596052 agaatataatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctcttt 40596117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 50797845 - 50797788
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  50797845 atgtgagtatgagagagaaagttgtcacaaaatgattgtacaaatatcatttctcttt 50797788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 44632594 - 44632538
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  44632594 atgtgagtatgagagagaaagttgtcaccaaatggatgttcaaatatcatttctctt 44632538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 50781575 - 50781631
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  50781575 atgtgagtatgagagagaaagttgtcataaaatggatgttcaaatatcatttctctt 50781631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 49241510 - 49241565
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| |||||||| |||||||||||||||| || |||||||||||||||||||||    
T  49241510 atgtgagtatgagagagaaagttgtcacaaagtggatgttcaaatatcatttctct 49241565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 47398457 - 47398511
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||| |||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  47398457 atgtgagtatgagagagaaaattgtcaaaaaatgaatgttcaaatatcatttctc 47398511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 48325764 - 48325842
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||| ||| ||| ||| ||||| |||||||| ||||| |||||||||||||  ||| |||||||||||||||||||    
T  48325764 agagagagaataagagtataatgtgagtatgagatagaaaattgtcacaaaatggttgtacaaatatcatttctctttt 48325842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 50882122 - 50882168
Alignment:
Q  41 tatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||    
T  50882122 tatgagagagaaaattgtcacaaaatgaatgttcaaatatcatttct 50882168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 19969567 - 19969620
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||| |||||||| |||||||||||| |||||| |||||||||||||||||||    
T  19969567 atgtgagtatgagagagaaagttgtcataaaatggatgttcaaatatcatttct 19969620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 48624928 - 48624883
Alignment:
Q  44 gagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||    
T  48624928 gagaaagtaagttgtcacaaaatggatgttcaaatatcatttctct 48624883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 27687505 - 27687581
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||| ||| | ||||| ||||| |||||||| | |||||||||||||||||  ||| |||||||||||||||||    
T  27687505 agagagagaataaaaatataatgtgagtatgagagataaagttgtcacaaaatggttgtacaaatatcatttctctt 27687581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 33054122 - 33054158
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    |||||||||||||||||||||||||||||||||||||    
T  33054122 aaagttgtcacaaaatgaatgttcaaatatcatttct 33054158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 1790545 - 1790506
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  1790545 aaagttgtcaccaaatgaatgttcaaatatcatttctctt 1790506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 37588709 - 37588748
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  37588709 aaagttgtcacaaaataaatgttcaaatatcatttctctt 37588748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 41507200 - 41507263
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttttatt 97  Q
    ||||| |||||||| |||||||||||||||||||  ||| ||||||||||||||| | ||||||    
T  41507200 atgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctcatgtttatt 41507263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 16836121 - 16836175
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||| |||||||| | |||||||||||||||||| ||| |||||||||||||||    
T  16836121 atgtgagtatgagagaaaaagttgtcacaaaatgattgtacaaatatcatttctc 16836175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 19442543 - 19442505
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  19442543 aaagttgtcacaaaatgattgttcaaatatcatttctct 19442505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 32319314 - 32319368
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||| |||||||| ||||||||||||| ||||| ||||| ||||||||||||||    
T  32319314 atgtgagtatgagagagaaagttgtcaccaaatggatgtttaaatatcatttctc 32319368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 40139200 - 40139126
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||| ||| | ||||| ||||| |||||||| |||||||||||| ||||||  ||| |||||||||||||||    
T  40139200 agagagagaataaaaatataatgtgagtatgagagagaaagttgtcataaaatggttgtacaaatatcatttctc 40139126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 43612078 - 43612144
Alignment:
Q  26 agaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||| ||||  |||||||| |||||||||||| ||||||  ||| |||||||||||||||||||    
T  43612078 agaatataatgtatgtatgagagagaaagttgtcataaaatggttgtacaaatatcatttctctttt 43612144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 4470348 - 4470385
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  4470348 aaagttgtcacaaaatggatgttcaaatatcatttctc 4470385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 30658882 - 30658923
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  30658882 aaagttgtcacaaaatggatgttcaaatatcatttctatttt 30658923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 34254386 - 34254423
Alignment:
Q  52 aagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  34254386 aagttgtcataaaatgaatgttcaaatatcatttctct 34254423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 35136881 - 35136844
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  35136881 aaagttgtcacaaaatggatgttcaaatatcatttctc 35136844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 36494523 - 36494478
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcattt 85  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||||    
T  36494523 gtatgagagagaaagttgtcactaaatggatgttcaaatatcattt 36494478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 36577446 - 36577483
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  36577446 aaagttgtcacaaaatggatgttcaaatatcatttctc 36577483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 36954745 - 36954666
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||||||||| | | || || ||||| ||||||||||||||||||||| ||||||  ||| ||||||||||||||||||||    
T  36954745 agagagagaaagtaaaaacataatgtgagtatgagaaagaaagttgtca-aaaatg-ttgtacaaatatcatttctcttttt 36954666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 44789177 - 44789214
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  44789177 aaagttgtcacaaaatggatgttcaaatatcatttctc 44789214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 52362519 - 52362478
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  52362519 aaagttgtcataaaatggatgttcaaatatcatttctctttt 52362478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 6143743 - 6143695
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||| |||||||||||||||| || ||||||||| ||||||||||    
T  6143743 gtatgagagagaaagttgtcacaaagtggatgttcaaacatcatttctc 6143695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 15705096 - 15705136
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  15705096 aaagttgtcataaaatggatgttcaaatatcatttctcttt 15705136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 33125368 - 33125408
Alignment:
Q  62 aaaatgaatgttcaaatatcatttctcttttttattttagg 102  Q
    |||||| |||||||||||||||||||||||||| |||||||    
T  33125368 aaaatggatgttcaaatatcatttctctttttttttttagg 33125408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 41197988 - 41197912
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||| |||||||||| || ||||| |||||||| | ||| |||||| ||||||  | |||||||||||||||||    
T  41197988 agagagaaaaaatgagaaaataatgtgagtatgagagataaaattgtcataaaatggttattcaaatatcatttctc 41197912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 44257547 - 44257595
Alignment:
Q  41 tatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||||||||||||||| | |||||||  |||||||||||||||||||    
T  44257547 tatgagaaagaaagttgttagaaaatgatcgttcaaatatcatttctct 44257595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 46911330 - 46911290
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  46911330 aaagttgtcacaaaatggatgttgaaatatcatttctcttt 46911290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 49453545 - 49453489
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| |||||||||||||||| ||  ||| |||||||||||||||||    
T  49453545 atgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctctt 49453489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 4857968 - 4857921
Alignment:
Q  42 atgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||| |||||||||||| ||| ||| ||||||||||||||||||||    
T  4857968 atgagagagaaagttgtcaaaaagtgattgttcaaatatcatttctct 4857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 5975610 - 5975547
Alignment:
Q  26 agaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||| ||||| |||||||| |||||||||||| ||| || |||| || |||||||||||||    
T  5975610 agaatataatgtgagtatgagagagaaagttgtcaaaaagtggatgtacatatatcatttctct 5975547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 10890080 - 10890119
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  10890080 aaagttgtcataaaatggatgttcaaatatcatttctctt 10890119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 11097918 - 11097957
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  11097918 aaagttgtcacaaaatggatgtacaaatatcatttctctt 11097957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 26159474 - 26159435
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    |||||| ||||||| |||||||||||||||||||||||||    
T  26159474 ttgtcaaaaaatgattgttcaaatatcatttctctttttt 26159435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 30467560 - 30467603
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    |||||||||| ||||||| |||||||||||||||||||| ||||    
T  30467560 aaagttgtcaaaaaatgactgttcaaatatcatttctctatttt 30467603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 46082155 - 46082194
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||| ||||| ||||||||||||||||||||||    
T  46082155 aaagttgtcactaaatggatgttcaaatatcatttctctt 46082194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 51286401 - 51286440
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  51286401 aaagttgtcataaaataaatgttcaaatatcatttctctt 51286440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 2211213 - 2211255
Alignment:
Q  49 agaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||| |||||||||||||||| |||||||||||||| |||||    
T  2211213 agaaatttgtcacaaaatgaatattcaaatatcatttgtcttt 2211255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 2854994 - 2855032
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  2854994 aaagttgtcataaaatgaatgtacaaatatcatttctct 2855032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 3603148 - 3603106
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||    
T  3603148 aaagttgtcactaaatggatgttcaaatatcatttctcatttt 3603106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 7128155 - 7128117
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  7128155 aaagttgtcactaaatggatgttcaaatatcatttctct 7128117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 8411752 - 8411790
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  8411752 aaagttgtcactaaatggatgttcaaatatcatttctct 8411790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 26585913 - 26585951
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  26585913 aaagttgtcactaaatggatgttcaaatatcatttctct 26585951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 34040534 - 34040572
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  34040534 aaagttatcacaaaatggatgttcaaatatcatttctct 34040572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 43893294 - 43893256
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  43893294 aaagttgtgacaaaatggatgttcaaatatcatttctct 43893256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 48872034 - 48872088
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||| ||||| |||||||||||| ||||||  ||| |||||||||||||||    
T  48872034 atgtgggtgtgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctc 48872088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 756893 - 756856
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  756893 aaagttgtcactaaatggatgttcaaatatcatttctc 756856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 2206201 - 2206274
Alignment:
Q  16 agagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||| | ||||| || || |||||| ||||||| |||||||||||| | ||| ||| ||||||||||||    
T  2206201 agagaaaataaaaatataatatgagtatgaaaaagaaaattgtcacaaaattattgtacaagtatcatttctct 2206274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 4154654 - 4154589
Alignment:
Q  26 agaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||| || || |||||||| |||||||||||| ||| | ||||| || |||||||||||||||    
T  4154654 agaatataatatgagtatgagagagaaagttgtcaaaaagtaaatgtacatatatcatttctcttt 4154589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 13489699 - 13489662
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  13489699 aaagttgtcataaaatggatgttcaaatatcatttctc 13489662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 30196797 - 30196724
Alignment:
Q  16 agagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa-tgaatgttcaaatatcatttctc 88  Q
    ||||| ||| ||||||| ||||| |||||||| |||||||||||| |||| ||| |||  ||||||||||||||    
T  30196797 agagagaataagaatataatgtgagtatgagagagaaagttgtcaaaaaattgattgtagaaatatcatttctc 30196724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 37178740 - 37178699
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||| |||| |||| |||||||||||||||||||||||||    
T  37178740 aaagttatcactaaataaatgttcaaatatcatttctctttt 37178699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 37690503 - 37690429
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||| | |||||||  ||||| |||||||| ||||| |||||| ||| ||| ||| |||||||||||||||    
T  37690503 agagagagaataagagaata--atgtgagtatgagagagaaaattgtcataaagtgattgtacaaatatcatttctc 37690429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 42256497 - 42256456
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||||||||||||||  ||| |||||||||||||||||||    
T  42256497 aaagttgtcacaaaatggttgtacaaatatcatttctctttt 42256456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 45272166 - 45272231
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttttatttt 99  Q
    ||||| |||||||| |||||||||||| ||| ||  ||| ||||||||||||||||| ||| ||||    
T  45272166 atgtgagtatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttctcttgtttttttt 45272231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 47820535 - 47820572
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  47820535 aaagttgtcataaaatggatgttcaaatatcatttctc 47820572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 50460698 - 50460771
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||||| ||| |||| || ||||| |||||||||||||||||||   ||||||  ||| ||||||||||||||    
T  50460698 agagagagaataagaagataatgtgagtatgagaaagaaagttgtacaaaaatggttgtacaaatatcatttct 50460771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 611650 - 611698
Alignment:
Q  43 tgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||| ||||| || || |||||||| ||||||||||||||||||||||    
T  611650 tgagagagaaaattatcccaaaatgattgttcaaatatcatttctcttt 611698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 902675 - 902635
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||| ||||  |||||||||||||||||||||||    
T  902675 aaagttgtcactaaatagatgttcaaatatcatttctcttt 902635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 7078534 - 7078574
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  7078534 aaagttgtcacaaaatagatgtacaaatatcatttctcttt 7078574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 9011682 - 9011642
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||||||||||  ||| ||||||||||||||||||    
T  9011682 aaagttgtcacaaaatggttgtacaaatatcatttctcttt 9011642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 24673106 - 24673066
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||| |||||  |||||||||||||||||||||||    
T  24673106 aaagttgtcataaaatagatgttcaaatatcatttctcttt 24673066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 29264063 - 29264015
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||||||| ||| ||  ||| |||||||||||||||    
T  29264063 gtatgagaaagaaagttgtcataaagtggttgtacaaatatcatttctc 29264015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 30414949 - 30414873
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||| |||| || ||||| |||||||| |||| |||||   ||||||  ||| |||||||||||||||||    
T  30414949 agagagaaaataagaagataatgtgagtatgagagagaaggttgtacaaaaatggttgtacaaatatcatttctctt 30414873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 31480125 - 31480181
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| |||||||| ||||||| || |||| || ||||||||||||||    
T  31480125 atgtgagtatgagagagaaagttatcacaaagtggatgtacatatatcatttctctt 31480181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 32915106 - 32915146
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||| |||||  |||||||||||||||||||||||    
T  32915106 aaagttgtcataaaatagatgttcaaatatcatttctcttt 32915146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 33669795 - 33669847
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaat 66  Q
    ||||||||||| ||||||| ||||| |||||||| | |||||||||| |||||    
T  33669795 agagagaaaataagaatataatgtgagtatgagagaaaaagttgtcaaaaaat 33669847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 34818056 - 34818104
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||| |||||||||| |  |||||||||| |||||||||||||||    
T  34818056 gtatgagagagaaagttgttaggaaatgaatgtacaaatatcatttctc 34818104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 42539472 - 42539416
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| || ||||| |||||||||||||| ||||  ||| |||||||||||||||||    
T  42539472 atgtgagtctgagagagaaagttgtcacataatggttgtacaaatatcatttctctt 42539416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 43893344 - 43893292
Alignment:
Q  13 gagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    |||||||||||||| |||||||||||  ||||||| ||||| |||||| ||||    
T  43893344 gagagagaaaatgaaaatatgatgtgaatatgagagagaaaattgtcataaaa 43893292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 46903535 - 46903479
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| ||||||||||  |||||||  ||| |||||||||||||||||    
T  46903535 atgtgagtatgagagagaaagttgtatcaaaatggttgtacaaatatcatttctctt 46903479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 48983702 - 48983742
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||| ||||||  ||||||||||||||||||||||    
T  48983702 aaagttgtcaaaaaatggttgttcaaatatcatttctcttt 48983742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 52715015 - 52714979
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  52715015 aaagttgtcacaaaatgattgtacaaatatcatttct 52714979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 44862 - 44784
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  44862 agagagagaaaatgagaatatgatgtaagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 44784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 28748200 - 28748122
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  28748200 agagagagaaaatgagaatatgatatgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 28748122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 754472 - 754509
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||||||||||||||||||||||||    
T  754472 aaagttgtcacaaaatgaatgttcaaatatcatttctc 754509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 2943493 - 2943444
Alignment:
Q  41 tatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  2943493 tatgagaaagaaaattgtcataaaataaatgttcaaatatcatttctctt 2943444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 7611536 - 7611495
Alignment:
Q  47 aaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  7611536 aaagaaagttgtcacaaaatgattgttcaaatatcatttctc 7611495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 5028271 - 5028327
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||| ||| ||||||||||||||||||| ||||| ||||||||||||||||    
T  5028271 atgtgagtataagagagaaagttgtcacaaaatggatgtttaaatatcatttctctt 5028327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 14699669 - 14699717
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatca 82  Q
    ||||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  14699669 atgtgagtatgagaaagaaagttatcacaaaatggatgttcaaatatca 14699717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 15318222 - 15318262
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  15318222 aaagttgtcacaaaatggatgttcaaatatcatttctcttt 15318262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 33421797 - 33421758
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  33421797 aaagttgtcacaaaatggatgttcaaatatcatttctctt 33421758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 12441612 - 12441534
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||||| || ||||| | ||||| |||||||| |||||||||||||||| |   ||| |||||||||||||||||||    
T  12441612 agagagaagataagaatgtcatgtgagtatgagagagaaagttgtcacaaagtagttgtacaaatatcatttctctttt 12441534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 1196132 - 1196056
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||| ||| ||| ||| ||||| |||| ||| |||||||||||| ||| ||| ||| |||||||||||||||||    
T  1196132 agagagagaataagagtataatgtgagtattagagagaaagttgtcaaaaagtgattgtacaaatatcatttctctt 1196056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 5327626 - 5327666
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  5327626 aaagttgtcactaaatggatgttcaaatatcatttctcttt 5327666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 6158766 - 6158850
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttttattt 98  Q
    ||||||| | |||||| || || || |||||||| | |||||||||| ||| ||||||| || |||||||||||||||| |||||    
T  6158766 agagagagattgagaagataatatgagtatgagagataaagttgtcaaaaagtgaatgtacatatatcatttctcttttgtattt 6158850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 6531218 - 6531254
Alignment:
Q  52 aagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||||||||| ||||||||||||||||||||    
T  6531218 aagttgtcacaaaatggatgttcaaatatcatttctc 6531254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 8505808 - 8505848
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  8505808 aaagttgtcaaaaaatgattgttcaaatatcatttctcttt 8505848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 11635569 - 11635613
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttttta 95  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||    
T  11635569 aaagttgtcaaaaaatgattgttcaaatatcatttctcattttta 11635613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 15368857 - 15368897
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||| |||||||| |||||||||||||||||||||||    
T  15368857 aaagttgttacaaaatggatgttcaaatatcatttctcttt 15368897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 15722537 - 15722577
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||||||||||| ||| ||||||||||||||||||    
T  15722537 aaagttgtcacaaaatgattgtacaaatatcatttctcttt 15722577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 2060633 - 2060696
Alignment:
Q  28 aatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||| ||||| |||||||| | |||||||||| ||||||  | ||||||||||||||||||||    
T  2060633 aatataatgtgagtatgagagaaaaagttgtcataaaatggttattcaaatatcatttctcttt 2060696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 17551413 - 17551456
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    |||||||||| ||||||  |||||||||||||||||||||||||    
T  17551413 aaagttgtcaaaaaatggttgttcaaatatcatttctctttttt 17551456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 24842405 - 24842366
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  24842405 aaagttgtcattaaatgaatgttcaaatatcatttctctt 24842366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 32459551 - 32459590
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  32459551 aaagttgtcataaaatggatgttcaaatatcatttctctt 32459590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 2242060 - 2242098
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  2242060 ttgtcaaaaaatgattgttcaaatatcatttctcttttt 2242098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 18141335 - 18141373
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  18141335 aaagttgtcataaaatgaatgtttaaatatcatttctct 18141373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 20822902 - 20822940
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  20822902 aaagttgtcataaaatggatgttcaaatatcatttctct 20822940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 30152564 - 30152598
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcattt 85  Q
    ||||||||||| |||||||||||||||||||||||    
T  30152564 aaagttgtcactaaatgaatgttcaaatatcattt 30152598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 9200179 - 9200118
Alignment:
Q  28 aatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| ||||| |||||| | |||||||||||| ||||||||||| || |||| ||||||||    
T  9200179 aatataatgtgagtatgaaagagaaagttgtcaaaaaatgaatgtacatatattatttctct 9200118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 13423056 - 13423003
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||| | | ||||| ||||| |||||||| |||||||||||||||||    
T  13423056 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaa 13423003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 25338077 - 25338142
Alignment:
Q  28 aatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||||||||   ||||||| |||||||||||| ||| ||||| | |||||||||||||| |||||    
T  25338077 aatatgatgtaaatatgagagagaaagttgtcataaagtgaatatacaaatatcatttcttttttt 25338142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 30945862 - 30945821
Alignment:
Q  49 agaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||||||||||||| |||  ||||||||||||||||    
T  30945862 agaaagttgtcacaaaatgattgtataaatatcatttctctt 30945821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 32644683 - 32644618
Alignment:
Q  28 aatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||| ||||| |||||||| |||||||||||| |||||   ||| ||||||||||||||| ||||    
T  32644683 aatataatgtgagtatgagagagaaagttgtcaaaaaatagttgtacaaatatcatttctcatttt 32644618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 35213595 - 35213632
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  35213595 aaagttgtcacaaaatagatgttcaaatatcatttctc 35213632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 2075485 - 2075525
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||| |||||| ||||| |||||||||||||||||||||||    
T  2075485 aaagctgtcactaaatggatgttcaaatatcatttctcttt 2075525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 2163750 - 2163702
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||| ||||| |||||||||| ||| ||| |||||||||||||||    
T  2163750 gtatgagagagaaaattgtcacaaattgattgtacaaatatcatttctc 2163702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 2175383 - 2175335
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||| ||||| |||||||||| ||| ||| |||||||||||||||    
T  2175383 gtatgagagagaaaattgtcacaaattgattgtacaaatatcatttctc 2175335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 3180026 - 3180066
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||| ||||||| ||| ||||||||||||||||||    
T  3180026 aaagttgtcaaaaaatgattgtacaaatatcatttctcttt 3180066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 3339533 - 3339573
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||||||||||  ||| ||||||||||||||||||    
T  3339533 aaagttgtcacaaaatggttgtacaaatatcatttctcttt 3339573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 83
Target Start/End: Original strand, 13143420 - 13143448
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcat 83  Q
    |||||||||||||||||||||||||||||    
T  13143420 ttgtcacaaaatgaatgttcaaatatcat 13143448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 14693272 - 14693308
Alignment:
Q  49 agaaagttgtcacaaaatgaatgttcaaatatcattt 85  Q
    |||||||| |||||||||| |||||||||||||||||    
T  14693272 agaaagttatcacaaaatggatgttcaaatatcattt 14693308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 28041819 - 28041875
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| | |||||||| || ||||| ||||| ||||||||||||||||    
T  28041819 atgtgagtatgagagaaaaagttgttaccaaatggatgtttaaatatcatttctctt 28041875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 31517166 - 31517242
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||| ||| ||| ||| ||||| |||||||| | |||||||||| ||| ||  ||| |||||||||||||||||    
T  31517166 agagagagaataagagtataatgtgagtatgagagaaaaagttgtcaaaaagtggttgtacaaatatcatttctctt 31517242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 35500784 - 35500871
Alignment:
Q  13 gagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttttatttta 100  Q
    ||||||||||||||||||||||| || |||||||| |||||||||||| ||||| |||||||| ||||||||||||| ||||||||||    
T  35500784 gagagagaaaatgagaatatgatatgagtatgagagagaaagttgtcaaaaaataaatgttcatatatcatttctctgttttatttta 35500871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 43769777 - 43769712
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttttatttt 99  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  43769777 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctcttttttttttt 43769712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 4949575 - 4949516
Alignment:
Q  31 atgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  4949575 atgatgtgagtatgagagagaaagttgtcaccaaatgaatgttcaaatatcatttctctt 4949516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 28657446 - 28657502
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  28657446 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 28657502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 31657712 - 31657657
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  31657712 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 31657657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 29974315 - 29974384
Alignment:
Q  16 agagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcattt 85  Q
    |||||||||||||||| |||||| |||||| | ||||||||||||||||||   ||||||||||||||||    
T  29974315 agagaaaatgagaataggatgtgagtatgaaagagaaagttgtcacaaaatagttgttcaaatatcattt 29974384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 4511899 - 4511819
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||||| ||| ||||||| ||||| |||||||| |||||||||||| ||||||  | | |||||||||||||||||||||    
T  4511899 agagagagaataagaatataatgtgagtatgagagagaaagttgtcataaaatggttatacaaatatcatttctctttttt 4511819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 17683290 - 17683236
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||| |||| ||| |||||||||||| |||||||||||||||||||||||||||    
T  17683290 atgtgagtataagagagaaagttgtcataaaatgaatgttcaaatatcatttctc 17683236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 2401698 - 2401645
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||||||| ||||||||||| |||||||| | |||||||||||||||    
T  2401698 agagagagaaaatgaaaatatgatgtgagtatgagagataaagttgtcacaaaa 2401645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 51225508 - 51225561
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||||||| ||||    
T  51225508 agagagagaaaatgagaatatgatgtgagtattagagagaaagttgtcataaaa 51225561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 13086059 - 13086019
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  13086059 aaagttgtcacaaaatgaatgatcaaatatcatttctcttt 13086019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 54802696 - 54802740
Alignment:
Q  49 agaaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||    
T  54802696 agaaagttgtcacaaaatggatgttcaaatatcatttatcttttt 54802740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 14010152 - 14010191
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  14010152 aaagttgtcacaaaatggatgttcaaatatcatttctctt 14010191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 22819686 - 22819647
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  22819686 aaagttgtcacaaaatggatgttcaaatatcatttctctt 22819647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 26718434 - 26718379
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| |||||||| ||||| |||||| |||||| |||||||||||||||||||||    
T  26718434 atgtgagtatgagagagaaaattgtcataaaatggatgttcaaatatcatttctct 26718379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 26731062 - 26731007
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| |||||||| ||||| |||||| |||||| |||||||||||||||||||||    
T  26731062 atgtgagtatgagagagaaaattgtcataaaatggatgttcaaatatcatttctct 26731007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 28676150 - 28676221
Alignment:
Q  26 agaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttttatt 97  Q
    ||||||| ||||| |||||| | |||||||||||||||||||  ||| |||||||||||||| |||| ||||    
T  28676150 agaatataatgtgagtatgaaagagaaagttgtcacaaaatggttgtacaaatatcatttctattttatatt 28676221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 23822279 - 23822321
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||||||||  |||||||||||||||||||||||||||||||    
T  23822279 aaagttgtcattaaatgaatgttcaaatatcatttctcttttt 23822321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 30778250 - 30778324
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||| ||| ||| ||| ||||| |||||||| |||||||||||||||| ||  ||| |||||||||||||||    
T  30778250 agagagataataagagtataatgtgagtatgagagagaaagttgtcacaaattggctgtacaaatatcatttctc 30778324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 39312621 - 39312675
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||| |||||||| ||||||||||||| ||||  ||||||||||||||||||||    
T  39312621 atgtgagtatgagagagaaagttgtcactaaatagatgttcaaatatcatttctc 39312675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 40590659 - 40590609
Alignment:
Q  41 tatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||| |||||||||||||||||| | |||| |||||||||||||||||    
T  40590659 tatgagacagaaagttgtcacaaaataattgtttaaatatcatttctcttt 40590609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 51573670 - 51573708
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  51573670 ttgtcacaaaatggatgttcaaatatcatttctcttttt 51573708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 55601700 - 55601762
Alignment:
Q  28 aatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| ||||| |||||||| |||||||||||| |||||  ||||||||||||| ||||||||    
T  55601700 aatataatgtgagtatgagagagaaagttgtcataaaatagatgttcaaatatcttttctctt 55601762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 5386438 - 5386385
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||| |||||||| |||||||||||| ||||||  ||||||||||||||||||    
T  5386438 atgtgagtatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttct 5386385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 10780066 - 10780119
Alignment:
Q  13 gagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaat 66  Q
    |||||||||||||| ||||||||||| | |||||||| |||||||||| |||||    
T  10780066 gagagagaaaatgaaaatatgatgtgagcatgagaaaaaaagttgtcataaaat 10780119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 10973675 - 10973728
Alignment:
Q  13 gagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaat 66  Q
    |||||||||||||| ||||||||||| | |||||||| |||||||||| |||||    
T  10973675 gagagagaaaatgaaaatatgatgtgagcatgagaaaaaaagttgtcataaaat 10973728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 17475359 - 17475318
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||| |||| ||||||||||||||||||||||||||||||    
T  17475359 aaagttatcaccaaatgaatgttcaaatatcatttctctttt 17475318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 47099059 - 47099022
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||||||||||||| |||||||||||||||||    
T  47099059 aaagttgtcacaaaatgaatattcaaatatcatttctc 47099022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 51887700 - 51887663
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  51887700 aaagttgtcacaaaatggatgttcaaatatcatttctc 51887663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 1868879 - 1868955
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||| |||| || ||||| |||||||| ||||||||||   ||||||  ||| |||||||||||||||||    
T  1868879 agagagaaaataagaagataatgtgagtatgagatagaaagttgtacaaaaatggttgtacaaatatcatttctctt 1868955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 2401647 - 2401611
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||||||||||||||| |||||||||||||||||||    
T  2401647 aaagttgtcacaaaatggatgttcaaatatcatttct 2401611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 17683407 - 17683359
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||| | |||||||||| |||||| ||||||||||||||||||||    
T  17683407 gtatgagagataaagttgtcataaaatggatgttcaaatatcatttctc 17683359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 4915711 - 4915746
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||||| ||||||||||||||||||||||    
T  4915711 ttgtcacaaaatggatgttcaaatatcatttctctt 4915746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 6141812 - 6141863
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt-ttttattttag 101  Q
    ||||||||||  |||||||| ||||||||||||||||||| |||||||||||    
T  6141812 aaagttgtcaataaatgaatattcaaatatcatttctcttattttattttag 6141863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 9162103 - 9162064
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  9162103 aaagttgtcacaaaatgattgtacaaatatcatttctctt 9162064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 12138903 - 12138860
Alignment:
Q  49 agaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||| |||||||||||||  ||||||||||||||||||||||||    
T  12138903 agaacgttgtcacaaaattcatgttcaaatatcatttctctttt 12138860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 22072314 - 22072263
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcattt 85  Q
    ||||| |||||||| | |||||||| ||||||||| ||||||||||||||||    
T  22072314 atgtgagtatgagagaaaaagttgtaacaaaatgattgttcaaatatcattt 22072263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 27408191 - 27408148
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||||||| ||||||  ||||||||||||||||||||||||||    
T  27408191 aaagttgtcgcaaaatagatgttcaaatatcatttctctttttt 27408148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 32365680 - 32365727
Alignment:
Q  41 tatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||| |||||||||||||||||||  ||| |||||||||||||||    
T  32365680 tatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctc 32365727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 32621692 - 32621637
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| |||| ||| |||||||||||||||||||  ||| ||||||||||||||||    
T  32621692 atgtgagtattagagagaaagttgtcacaaaatggttgtgcaaatatcatttctct 32621637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 35580210 - 35580159
Alignment:
Q  15 gagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaat 66  Q
    |||||| ||| ||||||| |||||||||||||||||||| |||||| |||||    
T  35580210 gagagagaataagaatataatgtgggtatgagaaagaaaattgtcaaaaaat 35580159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 37731980 - 37731921
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||| |||||||| ||||||||||  |||||||| ||| ||||||||||||||| ||||    
T  37731980 atgtgagtatgagagagaaagttgtaccaaaatgattgtacaaatatcatttctcctttt 37731921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 45143688 - 45143731
Alignment:
Q  44 gagaaagaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    |||| |||||||||||| |||||| |||||||||||||||||||    
T  45143688 gagagagaaagttgtcataaaatggatgttcaaatatcatttct 45143731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 45152457 - 45152500
Alignment:
Q  44 gagaaagaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    |||| |||||||||||| |||||| |||||||||||||||||||    
T  45152457 gagagagaaagttgtcataaaatggatgttcaaatatcatttct 45152500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 46686298 - 46686240
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||| |||||||| |||||||||| ||||||||  ||| ||||||||||||||||||||    
T  46686298 atgtgagtatgagagagaaagttgt-acaaaatggttgtacaaatatcatttctcttttt 46686240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 50980676 - 50980601
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||| | | ||||| ||||| |||||||| |||| ||||| | ||||||| ||| ||||||||||||||||    
T  50980676 agagagaaagtaaaaatataatgtgagtatgagagagaaggttgttagaaaatgattgtacaaatatcatttctct 50980601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 52846232 - 52846291
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||| |||||||| |||||||||||| |||||  ||||| ||||||||||||| |||||    
T  52846232 atgtgagtatgagagagaaagttgtcataaaatagatgtttaaatatcatttcttttttt 52846291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 54036515 - 54036591
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||| | |||||||  || || |||||||| | |||||||||||||||||  ||| |||||||||||||||||    
T  54036515 agagagagaataagagaata--atttgagtatgagagataaagttgtcacaaaatggttgtacaaatatcatttctctt 54036591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 2999145 - 2999107
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  2999145 ttgtcataaaatggatgttcaaatatcatttctcttttt 2999107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 5234483 - 5234533
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||| |||||||| ||||||| ||| ||| |||||||||||||||||    
T  5234483 gtatgagagagaaagttatcacaaagtgattgtacaaatatcatttctctt 5234533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 85
Target Start/End: Complemental strand, 14527681 - 14527647
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcattt 85  Q
    ||||||||||||||||| |||||||||||||||||    
T  14527681 aaagttgtcacaaaatggatgttcaaatatcattt 14527647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 19720675 - 19720717
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||||||||||||||| |||| ||||||||||||||| ||||    
T  19720675 aaagttgtcacaaaatggatgtgcaaatatcatttctcatttt 19720717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 30079883 - 30079845
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  30079883 aaagttgtcactaaatggatgttcaaatatcatttctct 30079845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 33093115 - 33093177
Alignment:
Q  28 aatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| ||||| || ||| ||||||||||||||||||||   ||| |||||||||||||||||    
T  33093115 aatataatgtgagtgtgaaaaagaaagttgtcacaaaatagttgtacaaatatcatttctctt 33093177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 39241307 - 39241361
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||| |||||||| |||||||||||||||| ||  ||| |||||||||||||||    
T  39241307 atgtgagtatgagagagaaagttgtcacaaattggttgtacaaatatcatttctc 39241361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 89
Target Start/End: Original strand, 39345018 - 39345052
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||||| |||||||||||||||||||||    
T  39345018 ttgtcacaaaatggatgttcaaatatcatttctct 39345052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 42490996 - 42490914
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||||||||| | | || || ||||| |||||||| |||||||||||| ||| ||  ||| |||||||||||||||| ||||    
T  42490996 agagagagaaagtaaaaacataatgtgagtatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttctctgtttt 42490914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 44368236 - 44368278
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  44368236 aaagttgtcacaaattgattgtacaaatatcatttctcttttt 44368278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 46406008 - 46406046
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  46406008 aaagttgtcaccaaatgaatattcaaatatcatttctct 46406046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 49241958 - 49242020
Alignment:
Q  23 atgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcattt 85  Q
    ||||||||||  |||| |||||| | |||||||||| ||||||||| | ||||||||||||||    
T  49241958 atgagaatatattgtgagtatgaaagagaaagttgtgacaaaatgattattcaaatatcattt 49242020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 7632496 - 7632537
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||||||| ||| ||| |||||||||||||||||||||||    
T  7632496 aaagttgtcaaaaattgattgttcaaatatcatttctctttt 7632537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 14443235 - 14443198
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  14443235 aaagttgtcaaaaaatgattgttcaaatatcatttctc 14443198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 14451430 - 14451393
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  14451430 aaagttgtcactaaatggatgttcaaatatcatttctc 14451393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 14593865 - 14593828
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| || |||||||||||||||||    
T  14593865 aaagttgtcacaaaatggatattcaaatatcatttctc 14593828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 21617216 - 21617183
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||| ||||||||||||||||||||    
T  21617216 ttgtcacaaaatggatgttcaaatatcatttctc 21617183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 22491348 - 22491381
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatt 84  Q
    |||||||||||||||||| |||||||||||||||    
T  22491348 aaagttgtcacaaaatgattgttcaaatatcatt 22491381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 88
Target Start/End: Original strand, 32546395 - 32546428
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||||| |||||||||||||||||||||    
T  32546395 ttgtcacaaaataaatgttcaaatatcatttctc 32546428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 33278712 - 33278671
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||||||||||||   |||||||||||||||||||||||    
T  33278712 aaagttgtcacaaaatagttgttcaaatatcatttctctttt 33278671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 39606054 - 39605978
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||| |||||| | || || ||||| |||||||| |||||||||||| ||||||  |||||| |||||||||||||    
T  39606054 agagagggaaaataaaaagataatgtgagtatgagagagaaagttgtca-aaaatggttgttcatatatcatttctct 39605978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 41262650 - 41262691
Alignment:
Q  49 agaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||||||||||| | ||| |||||||||||||||||    
T  41262650 agaaagttgtcacaaaataattgtacaaatatcatttctctt 41262691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 41609713 - 41609754
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||||||| |||||| |||| |||||||||||||||||||    
T  41609713 aaagttgtcataaaatggatgtacaaatatcatttctctttt 41609754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 44257713 - 44257766
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||| | | ||||| ||||| |||||||| |||||||||||||||||    
T  44257713 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaa 44257766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 46173622 - 46173548
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||| | |||||||  ||||| ||| |||| |||||||||||||||| ||  ||| |||||||||||||||||    
T  46173622 agagagaataagagaata--atgtgagtacgagagagaaagttgtcacaaagtggttgtacaaatatcatttctctt 46173548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 51741394 - 51741357
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  51741394 aaagttgtcactaaataaatgttcaaatatcatttctc 51741357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 1840643 - 1840595
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||| ||| |||||||| ||||||||||  |||||||||||||||||||    
T  1840643 gtataagagagaaagttatcacaaaatggttgttcaaatatcatttctc 1840595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 3223026 - 3222986
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||||||| ||| ||| ||||||||||||||||||    
T  3223026 aaagttgtcacaaattgattgtacaaatatcatttctcttt 3222986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 5932191 - 5932231
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||| ||||| ||||| |||||||||||||||||    
T  5932191 aaagttgtcactaaatggatgtttaaatatcatttctcttt 5932231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 21014091 - 21014055
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  21014091 aaagttgtcaaaaaatgattgttcaaatatcatttct 21014055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 21392598 - 21392566
Alignment:
Q  60 acaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||||| |||||||||||||||||||||||    
T  21392598 acaaaatgattgttcaaatatcatttctctttt 21392566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 23094413 - 23094373
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||| ||||||||||| ||| ||||||||||||||||||    
T  23094413 aaagttatcacaaaatgattgtacaaatatcatttctcttt 23094373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 31221450 - 31221410
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||||||| ||| ||| ||||||||||||||||||    
T  31221450 aaagttgtcacaaattgattgtacaaatatcatttctcttt 31221410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 37514166 - 37514206
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||| |||||||| |||| ||||||||||||||||||    
T  37514166 aaagttgttacaaaatggatgtacaaatatcatttctcttt 37514206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 38864770 - 38864810
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||||||||| | ||| ||||||||||||||||||    
T  38864770 aaagttgtcacaaaataattgtacaaatatcatttctcttt 38864810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 46566966 - 46566922
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttttta 95  Q
    |||||||||||||| || |||| ||||||||||||||||| ||||    
T  46566966 aaagttgtcacaaagtggatgtacaaatatcatttctcttattta 46566922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 46844227 - 46844279
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaat 66  Q
    ||||||||||| ||||| | ||||| |||||||| |||||||||||| |||||    
T  46844227 agagagaaaataagaatgtcatgtgagtatgagagagaaagttgtcaaaaaat 46844279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 49761373 - 49761307
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttttatttta 100  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49761373 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctcttttttatttta 49761307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 1765458 - 1765402
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  1765458 atgtgcgtatgagagagaaagttgtcacaaaatgaatgtacaaatatcatttctctt 1765402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 42962381 - 42962306
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||||||||| |||||||||||| |||||| | |||||||||||| |||||  |||||| ||||||||||||||    
T  42962381 agagagaaaatgtgaatatgatgtgagtatgaaagagaaagttgtcataaaattgatgttctaatatcatttctct 42962306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 3281721 - 3281779
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||| |||| ||| |||||||||||||||||| |||||||||||||||||||||||||    
T  3281721 atgtgagtataagagagaaagttgtcacaaaataaatgttcaaatatcatttctctttt 3281779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 30909066 - 30909017
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttttttatttta 100  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  30909066 aaagttgtcactaaatgaatgttcaaatatcatttctctattttatttta 30909017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 26672465 - 26672410
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  26672465 atgtgagtatgagagagaa-gttgtcacaaaatgaatgttcaaatatcatttctctt 26672410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 54260187 - 54260260
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcattt 85  Q
    ||||||||||||||||||||  || || ||||||||||||||||||| | |||||  ||||| |||||||||||    
T  54260187 agagagagaaaatgagaataaaatatgagtatgagaaagaaagttgttataaaatagatgttgaaatatcattt 54260260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 33976428 - 33976472
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttttta 95  Q
    |||||||| |||||||| |||||||||||||||||||||||||||    
T  33976428 aaagttgttacaaaatggatgttcaaatatcatttctctttttta 33976472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 46094477 - 46094421
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||| | |||||||||||| ||||||||||| |||||||||||||||||    
T  46094477 atgtgagtatgaaatagaaagttgtcataaaatgaatgtccaaatatcatttctctt 46094421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 21196160 - 21196121
Alignment:
Q  52 aagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  21196160 aagttgtcacaaaatggatgttcaaatatcatttctcttt 21196121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 47683855 - 47683800
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| |||||||| |||||||||||||||||||  ||| ||||||||||||||||    
T  47683855 atgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctct 47683800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 1337844 - 1337898
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||| |||||||| ||||| |||||| |||||| ||||||||||||||||||||    
T  1337844 atgtgagtatgagatagaaaattgtcataaaatggatgttcaaatatcatttctc 1337898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 6999205 - 6999167
Alignment:
Q  52 aagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  6999205 aagttgtcataaaatgaatgttcaaatatcatttctctt 6999167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 9753284 - 9753230
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||| |||||||| | ||| |||||||||||||| |||||||||||||||||||    
T  9753284 atgtgagtatgagagataaaattgtcacaaaatgattgttcaaatatcatttctc 9753230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 50207004 - 50207042
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  50207004 aaagttgtcacaaaatggatgttcaaatatcatttctct 50207042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 51465925 - 51465975
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||| ||||||| ||||||||||  ||||||||||||||||||||||    
T  51465925 gtatgagagagaaagtggtcacaaaatagatgttcaaatatcatttctctt 51465975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 21005187 - 21005236
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||| ||| ||||||||||||||||||  |||||||||||||||||||||    
T  21005187 gtataagagagaaagttgtcacaaaatagatgttcaaatatcatttctct 21005236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 24482997 - 24483034
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  24482997 aaagttgtcacaaaatggatgttcaaatatcatttctc 24483034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 24645422 - 24645365
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||| |||||||| | |||||||||| |||||| ||||||||||||||||| |||||    
T  24645422 atgtgagtatgagagaaaaagttgtcataaaatggatgttcaaatatcatttttcttt 24645365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 28700548 - 28700471
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||| | | || || ||||| |||||||| | |||||||||| ||||||  ||||||||||||||||||||    
T  28700548 agagagagaaagtaaaaacataatgtgagtatgagagataaagttgtcaaaaaatggttgttcaaatatcatttctct 28700471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 30567994 - 30568031
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||||||||| |||||||||||||||||||||    
T  30567994 aaagttgtcacaaaataaatgttcaaatatcatttctc 30568031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 43169741 - 43169815
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||| | |||||||  ||||| |||||||| | |||||||||||||||||  ||| |||||||||||||||||    
T  43169741 agagagaataagagaata--atgtgagtatgagagaaaaagttgtcacaaaatggttgtacaaatatcatttctctt 43169815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 50745634 - 50745557
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||| ||| |||| || ||||| |||||||| ||||||||||   ||||||| ||| ||||||||||||||||||    
T  50745634 agagagagaataagaagataatgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatatcatttctcttt 50745557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 54195390 - 54195341
Alignment:
Q  49 agaaagttgtcacaaaatgaatgttcaaatatcatttctcttttttattt 98  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||| ||||    
T  54195390 agaaagttgtcactaaatggatgttcaaatatcatttctctatttgattt 54195341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 10207007 - 10207047
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  10207007 aaagttgtcactaaatggatgttcaaatatcatttctcttt 10207047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 23906973 - 23907049
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||| ||| ||||| | ||||| |||||||| |||||||||| ||| ||||  ||| |||||||||||||||||    
T  23906973 agagagagaataagaatctcatgtgagtatgagagagaaagttgtaacataatggttgtacaaatatcatttctctt 23907049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 26996353 - 26996313
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  26996353 aaagttgttactaaatgaatgttcaaatatcatttctcttt 26996313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 32205682 - 32205607
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||| | || || |||||||||||||| | |||||||| | || |||| |||||||||||||||||||    
T  32205682 agagagagaaaataaaaagataatgtgggtatgagagataaagttgt-aaaacatgattgttcaaatatcatttctc 32205607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 37780392 - 37780324
Alignment:
Q  20 aaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||| |||||| |||||| |||||||| ||||||||||||||||||   |||| |||||| |||||||    
T  37780392 aaaattagaatacgatgtgagtatgagagagaaagttgtcacaaaattgttgttaaaatattatttctc 37780324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 46574182 - 46574150
Alignment:
Q  56 tgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||||||||||||||||||||||||||    
T  46574182 tgtcacaaaatgaatgttcaaatatcatttctc 46574150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 46953003 - 46952943
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||| |||||||| |||||||| ||| ||||||  ||| |||||||||||||||||||||    
T  46953003 atgtgagtatgagagagaaagttatcaaaaaatggttgtacaaatatcatttctctttttt 46952943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 47774009 - 47774049
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  47774009 aaagttatcacaaaatgaatgtacaaatatcatttctcttt 47774049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 49021798 - 49021746
Alignment:
Q  13 gagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    |||||| ||||| | ||||| ||||| ||||||||||||||||||||||||||    
T  49021798 gagagacaaaataaaaatataatgtgagtatgagaaagaaagttgtcacaaaa 49021746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 54773788 - 54773828
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  54773788 aaagttgtcactaaatggatgttcaaatatcatttctcttt 54773828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 31376799 - 31376838
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  31376799 aaagttgtcacaaaatggatgttcaaatatcatttatctt 31376838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 89
Target Start/End: Complemental strand, 42683857 - 42683826
Alignment:
Q  58 tcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||||||||||||||||||||||||    
T  42683857 tcacaaaatgaatgttcaaatatcatttctct 42683826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 48893408 - 48893341
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttttattttag 101  Q
    ||||| |||||||| | ||| |||||| |||||||||||| |||||||||||||| || |||| ||||    
T  48893408 atgtgagtatgagagaaaaaattgtcaaaaaatgaatgtttaaatatcatttctccttattatattag 48893341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 28884565 - 28884491
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||| ||| ||||| | ||||| |||||||| |||||||||||||| ||||  ||| ||||||| |||||||    
T  28884565 agagagagaataagaatctcatgtgagtatgagagagaaagttgtcacataatggttgtacaaatattatttctc 28884491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 43333704 - 43333746
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||    
T  43333704 aaagttgtcataaaatgactgtacaaatatcatttctcttttt 43333746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 44677518 - 44677556
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  44677518 aaagttgtcactaaatggatgttcaaatatcatttctct 44677556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 48281886 - 48281924
Alignment:
Q  49 agaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  48281886 agaaagttgtcacaaaatatatgttcaaatatcatttct 48281924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 52454128 - 52454170
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  52454128 aaagttgtcacaaattgattgtacaaatatcatttctcttttt 52454170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 55322700 - 55322782
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||||||||| | | || || ||||| ||||| || |||||||||||||||||||   || |||||||||||| ||||||||    
T  55322700 agagagagaaagtaaaaacataatgtgagtatgggagagaaagttgtcacaaaatgctcgtacaaatatcatttatctttttt 55322782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 2482708 - 2482745
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  2482708 aaagttgtcacaaaatggatgtacaaatatcatttctc 2482745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 3347156 - 3347193
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  3347156 aaagttatcacaaaatggatgttcaaatatcatttctc 3347193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 14207241 - 14207294
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    |||||||||||||||  | || ||||| |||||||| |||||||||||||||||    
T  14207241 agagagagaaaatgaagacataatgtgagtatgagagagaaagttgtcacaaaa 14207294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 14214989 - 14215042
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    |||||||||||||||  | || ||||| |||||||| |||||||||||||||||    
T  14214989 agagagagaaaatgaagacataatgtgagtatgagagagaaagttgtcacaaaa 14215042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 16675538 - 16675587
Alignment:
Q  41 tatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||| ||||| ||||||||| ||| ||| ||||||||||||||||||    
T  16675538 tatgagagagaaaattgtcacaagatggatgctcaaatatcatttctctt 16675587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 19149055 - 19148999
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||| |||||||| |||||||| | | ||||||| ||||||||||||||||||||||    
T  19149055 atgtgagtatgagagagaaagttataa-aaaatgattgttcaaatatcatttctcttt 19148999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 29525270 - 29525233
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  29525270 aaagttgtcataaaatgaatgtacaaatatcatttctc 29525233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 32767713 - 32767672
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||||||| ||||| || |||||||||||||||||||||    
T  32767713 aaagttgtcactaaatggatattcaaatatcatttctctttt 32767672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 37927239 - 37927276
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  37927239 aaagttgtcaccaaatggatgttcaaatatcatttctc 37927276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 45055011 - 45054974
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  45055011 aaagttgtcagaaaatggatgttcaaatatcatttctc 45054974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 46019499 - 46019458
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||||| ||||||  ||||||||||||||||||||||||    
T  46019499 aaagttgtcgcaaaatagatgttcaaatatcatttctctttt 46019458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 49363285 - 49363322
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  49363285 aaagttgtcactaaatggatgttcaaatatcatttctc 49363322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 50146536 - 50146487
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||||| ||||| |||||||||||||| | | ||||||||||||||||    
T  50146536 gtatgagagagaaaattgtcacaaaatgattatacaaatatcatttctct 50146487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 53718086 - 53718049
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  53718086 aaagttgtcacaaaatggatgtttaaatatcatttctc 53718049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 55400036 - 55399999
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  55400036 aaagttgtcataaaatggatgttcaaatatcatttctc 55399999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 7248 - 7288
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||| ||||||| ||| ||||||||||||||||||    
T  7248 aaagttgtcagaaaatgattgtacaaatatcatttctcttt 7288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 3484842 - 3484770
Alignment:
Q  16 agagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||| ||| ||||||| ||||| |||||||| |||||||||| | ||||||  ||  |||||||||||||||    
T  3484842 agagagaataagaatataatgtgagtatgagagagaaagttgtaataaaatggttggacaaatatcatttctc 3484770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 8254064 - 8254024
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||||||||||  ||| ||||||||||||||||||    
T  8254064 aaagttgtcacaaaatggttgtacaaatatcatttctcttt 8254024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 29097565 - 29097601
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaa 76  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  29097565 gtatgagagagaaagttgtcacaaaatggatgttcaa 29097601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 29846889 - 29846953
Alignment:
Q  26 agaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||| ||||| |||||||| ||||||||||   ||||||  ||| |||||||||||||||||    
T  29846889 agaatataatgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcatttctctt 29846953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 37508532 - 37508572
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||| |||| ||||| |||||||||||||||||||||||    
T  37508532 aaagttatcactaaatggatgttcaaatatcatttctcttt 37508572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 39671132 - 39671172
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||| ||||  |||||||||||||||||||||||    
T  39671132 aaagttgtcactaaatagatgttcaaatatcatttctcttt 39671172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 49196733 - 49196693
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||||||||||  ||| ||||||||||||||||||    
T  49196733 aaagttgtcacaaaatggttgtacaaatatcatttctcttt 49196693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 49361823 - 49361899
Alignment:
Q  16 agagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||| ||| |||| || ||||| |||||||| | ||||||||   ||||||| ||| |||||||||||||||||||    
T  49361823 agagagaataagaagataatgtgagtatgagagaaaaagttgtacaaaaatgattgtacaaatatcatttctctttt 49361899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 95
Target Start/End: Original strand, 51973413 - 51973445
Alignment:
Q  63 aaatgaatgttcaaatatcatttctctttttta 95  Q
    ||||| |||||||||||||||||||||||||||    
T  51973413 aaatggatgttcaaatatcatttctctttttta 51973445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 52937249 - 52937205
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaat 78  Q
    ||||| |||||||| |||||||||||| ||||| |||||||||||    
T  52937249 atgtgagtatgagatagaaagttgtcataaaataaatgttcaaat 52937205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 8920166 - 8920113
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  8920166 agagagagaaaatgagaatatgatgtgagtatgagagagaaagttgtcacaaaa 8920113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 41173340 - 41173287
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  41173340 agagagagaaaatgagaatatgatgtgagtatgagagagaaagttgttacaaaa 41173287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 21922128 - 21922180
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaa 64  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  21922128 agagagagaaaataagaatatgatgtgagtatgagagagaaagttgtcacaaa 21922180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 1839350 - 1839401
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcattt 85  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||||||||    
T  1839350 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 1839401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 372720 - 372785
Alignment:
Q  28 aatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||| ||||| |||||||| |||||||||||||||||||  ||| |||| |||||||||||||||    
T  372720 aatatcatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaaaatcatttctcttttt 372785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 9226367 - 9226310
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||| |||||||| ||||||||||||  ||||| |||||||||||||||||||||||    
T  9226367 atgtgagtatgagagagaaagttgtcattaaatggatgttcaaatatcatttctcttt 9226310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 34270387 - 34270334
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    |||||||| ||||| |||||||||| || |||||||||||||||||||||||||    
T  34270387 gtatgagagagaaaattgtcacaaagtggatgttcaaatatcatttctcttttt 34270334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 3640202 - 3640258
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||| |||||||| ||||||||||| ||||||  ||||||||||||||||||||||    
T  3640202 atgtgagtatgagagagaaagttgtctcaaaatagatgttcaaatatcatttctctt 3640258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 14206454 - 14206394
Alignment:
Q  34 atgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||| |||||||| |||||||||||| ||||||  ||| |||||||||||||||||||||    
T  14206454 atgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctctttttt 14206394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 42267417 - 42267357
Alignment:
Q  28 aatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||| ||||| |||||||| | ||||||||||| ||||||||| ||||||||||||||||    
T  42267417 aatataatgtgtgtatgagagaaaaagttgtcactaaatgaatgatcaaatatcatttctc 42267357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 94
Target Start/End: Original strand, 8675467 - 8675510
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    |||||| |||||||||| ||||||||||||||||||||||||||    
T  8675467 aaagttatcacaaaatggatgttcaaatatcatttctctttttt 8675510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 13734358 - 13734425
Alignment:
Q  26 agaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||||| ||||| |||||||| |||||||||||| ||| ||  ||| ||||||||||||||||||||    
T  13734358 agaatataatgtgagtatgagagagaaagttgtcataaagtggttgtacaaatatcatttctcttttt 13734425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 15953056 - 15953106
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||| | ||||||||||||||||  ||||||||||||||||||||||    
T  15953056 gtatgagagaaaaagttgtcacaaaatagatgttcaaatatcatttctctt 15953106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 22402660 - 22402698
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  22402660 aaagttgtcacaaaataaatgttcaaatatcatttctct 22402698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 30640827 - 30640789
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  30640827 aaagttgtcacaaaatggatgttcaaatatcatttctct 30640789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 6865787 - 6865848
Alignment:
Q  28 aatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||| ||||| |||||||| |||||||||||||||| ||  ||| ||||||||||||||||    
T  6865787 aatattatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctct 6865848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 9933537 - 9933500
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||| |||||||||||||||||||||||||||    
T  9933537 aaagttgtcataaaatgaatgttcaaatatcatttctc 9933500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 19840024 - 19840065
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctcttttttat 96  Q
    |||||| ||||||||||||||||||||||||||||| |||||    
T  19840024 ttgtcataaaatgaatgttcaaatatcatttctcttatttat 19840065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 21064260 - 21064297
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  21064260 aaagttgtcactaaatgaatgttcaaatatcatttctc 21064297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 33567210 - 33567288
Alignment:
Q  13 gagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||||||| | |||||||  ||||| |||||||| |||||||||||||||| ||  ||| |||||||||||| |||||||    
T  33567210 gagagagaataagagaata--atgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttgtcttttt 33567288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 35473411 - 35473358
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||||| |||||||||| ||  ||||||| |||||||||||||||||    
T  35473411 agagagagaaaataagaatatgatatgaatatgagagagaaagttgtcacaaaa 35473358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 5007743 - 5007799
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctcttttttat 96  Q
    |||||| | ||||| ||||||||||||   |||||||||||||||||||||||||||    
T  5007743 gtatgaaagagaaaattgtcacaaaattgttgttcaaatatcatttctcttttttat 5007799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 9957187 - 9957263
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||| |||||||| || ||||| ||||||||||||||||| |   ||||| | ||| |||||||||||||||||    
T  9957187 agagagataatgagaagataatgtgagtatgagaaagaaagttctacaaaaataattgtacaaatatcatttctctt 9957263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 18511837 - 18511869
Alignment:
Q  58 tcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||||||||||||||||||||||||||    
T  18511837 tcacaaaatgaatgttcaaatatcatttctctt 18511869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 9977156 - 9977117
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||| ||||| ||||||||||||||||||||||    
T  9977156 aaagttgtcactaaatggatgttcaaatatcatttctctt 9977117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 14011354 - 14011315
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  14011354 aaagttgttacaaaatgattgttcaaatatcatttctctt 14011315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 23126377 - 23126416
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||||||| ||||| ||||||||||||||||||||||    
T  23126377 aaagttgtcactaaatggatgttcaaatatcatttctctt 23126416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Original strand, 17402960 - 17402998
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctcttttt 93  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  17402960 ttgtcaccaaatggatgttcaaatatcatttctcttttt 17402998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 21922182 - 21922216
Alignment:
Q  54 gttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||||||| ||||||||||||||||||||    
T  21922182 gttgtcacaaaatggatgttcaaatatcatttctc 21922216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 26660446 - 26660484
Alignment:
Q  52 aagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  26660446 aagttgtcacaaaatggatgtacaaatatcatttctctt 26660484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 26932038 - 26932076
Alignment:
Q  52 aagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  26932038 aagttgtcacaaaatggatgtacaaatatcatttctctt 26932076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 31284406 - 31284448
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatca 82  Q
    |||||||| ||||||||||||||||||| |||| |||||||||    
T  31284406 gtatgagagagaaagttgtcacaaaatggatgtacaaatatca 31284448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 35075612 - 35075650
Alignment:
Q  53 agttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  35075612 agttgtcaaaaaatgattgttcaaatatcatttctcttt 35075650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 2117611 - 2117660
Alignment:
Q  15 gagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaa 64  Q
    |||||| ||| ||||||| ||||| |||||||| ||||||||||||||||    
T  2117611 gagagagaataagaatataatgtgagtatgagagagaaagttgtcacaaa 2117660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 4430970 - 4431007
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  4430970 aaagttgtcactaaatggatgttcaaatatcatttctc 4431007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 6517749 - 6517712
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  6517749 aaagttgtcataaaatggatgttcaaatatcatttctc 6517712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 14324003 - 14324040
Alignment:
Q  52 aagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  14324003 aagttgtcacaaaatggatgtgcaaatatcatttctct 14324040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 14923135 - 14923079
Alignment:
Q  35 tgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||| |||||||| |||||||||| | ||||||  |||||||||||||||||||||||    
T  14923135 tgtgagtatgagagagaaagttgtaa-aaaatggttgttcaaatatcatttctctttt 14923079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 15267821 - 15267780
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||    
T  15267821 aaagttgtcactaaatggatgttaaaatatcatttctctttt 15267780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 22098343 - 22098290
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||| | | ||||| ||||| |||||||| |||||||||||||||||    
T  22098343 agagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaa 22098290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 88
Target Start/End: Original strand, 25871484 - 25871517
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||| ||||||||||||||||||||    
T  25871484 ttgtcacaaaatggatgttcaaatatcatttctc 25871517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 27440516 - 27440479
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  27440516 aaagttgtcacaaaatgattgtacaaatatcatttctc 27440479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 91
Target Start/End: Complemental strand, 32912064 - 32912035
Alignment:
Q  62 aaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||||||||||||||||||||||    
T  32912064 aaaatgaatgttcaaatatcatttctcttt 32912035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 33910086 - 33910147
Alignment:
Q  26 agaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    ||||||| ||||| |||||||| |||||||||||| ||||||  ||  ||||||||||||||    
T  33910086 agaatataatgtgagtatgagagagaaagttgtcaaaaaatggttgaacaaatatcatttct 33910147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 37700493 - 37700452
Alignment:
Q  55 ttgtcacaaaatgaatgttcaaatatcatttctcttttttat 96  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||    
T  37700493 ttgtcaccaaatggatgttcaaatatcatttctctttcttat 37700452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 43441775 - 43441738
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  43441775 aaagttgttacaaaatggatgttcaaatatcatttctc 43441738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 6241704 - 6241656
Alignment:
Q  17 gagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    |||||||||| ||||||||||| |||||||| | |||||||||| ||||    
T  6241704 gagaaaatgaaaatatgatgtgagtatgagagataaagttgtcataaaa 6241656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 10649472 - 10649436
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttct 87  Q
    |||||||||| |||||| |||||||||||||||||||    
T  10649472 aaagttgtcataaaatggatgttcaaatatcatttct 10649436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 96
Target Start/End: Original strand, 18397219 - 18397247
Alignment:
Q  68 aatgttcaaatatcatttctcttttttat 96  Q
    |||||||||||||||||||||||||||||    
T  18397219 aatgttcaaatatcatttctcttttttat 18397247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 19481216 - 19481256
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||| ||| |||||| |||||||||||||||||||||||    
T  19481216 aaagttatcataaaatggatgttcaaatatcatttctcttt 19481256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 21156024 - 21155976
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttttttatttt 99  Q
    |||||||||| ||||||  ||||||||||||||||||| | ||||||||    
T  21156024 aaagttgtcaaaaaatggttgttcaaatatcatttctcatatttatttt 21155976  T

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Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 33620645 - 33620605
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    ||||||||||| ||||| || ||||||||||||||||||||    
T  33620645 aaagttgtcactaaatggatattcaaatatcatttctcttt 33620605  T

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Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 42509665 - 42509613
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||||| | ||| |||||| ||||||| |||| ||||||||||||||||||    
T  42509665 gtatgagagaaaaatttgtcataaaatgattgttaaaatatcatttctctttt 42509613  T

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Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 42699094 - 42699050
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttttta 95  Q
    |||||||||||||||||  ||| ||||||||||||||| ||||||    
T  42699094 aaagttgtcacaaaatggttgtacaaatatcatttctcattttta 42699050  T

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Target: scaffold0034 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 22665 - 22575
Alignment:
Q  13 gagagagaaaatgagaatatgatgtgggtatgagaaagaaagtt------------gtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||||||| ||||||||||| ||||||||||||| |||            |||||||||||||||||||||||||||||||||||    
T  22665 gagagagaaaatgaaaatatgatgtgagtatgagaaagaatgttatcataaaagctgtcacaaaatgaatgttcaaatatcatttctcttt 22575  T

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Target: scaffold0221 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 8251 - 8211
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctcttt 91  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  8251 aaagttgtcataaaatgaatgttcaaatatcatttctcttt 8211  T

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Target: scaffold0054 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 31586 - 31662
Alignment:
Q  14 agagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctt 90  Q
    ||||||| ||| ||| ||| ||||| |||||||| |||||||||||| ||||||  ||| |||||||||||||||||    
T  31586 agagagagaataagagtataatgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctctt 31662  T

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Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 76603 - 76656
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaa 65  Q
    ||||||||||| ||| || || |||||||||||||| |||||||||||||||||    
T  76603 agagagagaaagtgaaaagataatgtgggtatgagagagaaagttgtcacaaaa 76656  T

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Target: scaffold0072 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 14535 - 14615
Alignment:
Q  12 agagagagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    ||||||||| ||| ||||||| ||||| |||||| ||| ||| |||| | ||||||  ||| |||||||||||||||||||    
T  14535 agagagagagaataagaatataatgtgagtatgaaaaaaaaaattgtaataaaatggctgtacaaatatcatttctctttt 14615  T

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Target: scaffold0321 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 19673 - 19635
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  19673 aaagttgtcactaaatggatgttcaaatatcatttctct 19635  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 38462 - 38424
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctct 89  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  38462 aaagttgtcataaaatgaatgttcaaatattatttctct 38424  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 22888 - 22922
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcattt 85  Q
    |||||||||||||||||| ||||||||||||||||    
T  22888 aaagttgtcacaaaatgattgttcaaatatcattt 22922  T

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Target: scaffold0532 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 11001 - 10964
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  11001 aaagttgtcccaaaatggatgttcaaatatcatttctc 10964  T

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Target: scaffold0471 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 44 - 3
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctctttt 92  Q
    |||||| |||| ||||| ||||||||||||||||||||||||    
T  44 aaagttttcactaaatggatgttcaaatatcatttctctttt 3  T

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Target: scaffold0095 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 16299 - 16262
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  16299 aaagttgtcacaaaatggatgtccaaatatcatttctc 16262  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 223513 - 223550
Alignment:
Q  51 aaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    ||||||||||||||||| || |||||||||||||||||    
T  223513 aaagttgtcacaaaatggatattcaaatatcatttctc 223550  T

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Target: scaffold0286 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 18659 - 18707
Alignment:
Q  40 gtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctc 88  Q
    |||||||| ||||| |||||||||| ||| ||| |||||||||||||||    
T  18659 gtatgagagagaaaattgtcacaaattgattgtacaaatatcatttctc 18707  T

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Target: scaffold0155 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 3273 - 3337
Alignment:
Q  30 tatgatgtgggtatgagaaagaaagttgtcacaaaatgaatgttcaaatatcatttctctttttt 94  Q
    ||||||||| |||||||| |||||||||| | ||| ||  ||| |||||||||||||||| ||||    
T  3273 tatgatgtgagtatgagagagaaagttgtgagaaagtggttgtacaaatatcatttctctctttt 3337  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 34491 - 34443
Alignment:
Q  16 agagaaaatgagaatatgatgtgggtatgagaaagaaagttgtcacaaa 64  Q
    ||||||||| ||| ||| ||||| |||||||| ||||||||||||||||    
T  34491 agagaaaataagagtataatgtgagtatgagagagaaagttgtcacaaa 34443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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