View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10781_low_4 (Length: 271)

Name: NF10781_low_4
Description: NF10781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10781_low_4
NF10781_low_4
[»] chr4 (40 HSPs)
chr4 (18-261)||(39772021-39772264)
chr4 (92-171)||(7608595-7608675)
chr4 (92-171)||(11123257-11123337)
chr4 (92-171)||(26564456-26564536)
chr4 (92-171)||(44887531-44887611)
chr4 (191-238)||(33969072-33969119)
chr4 (89-171)||(42907430-42907513)
chr4 (90-171)||(15987619-15987701)
chr4 (90-171)||(47550743-47550825)
chr4 (91-171)||(36918689-36918770)
chr4 (92-171)||(21423486-21423566)
chr4 (92-171)||(55827013-55827093)
chr4 (184-259)||(29615159-29615234)
chr4 (97-171)||(31918950-31919025)
chr4 (90-171)||(6382664-6382746)
chr4 (90-170)||(31752163-31752244)
chr4 (92-171)||(3737422-3737502)
chr4 (92-171)||(4766705-4766785)
chr4 (92-171)||(5903004-5903084)
chr4 (92-171)||(6482415-6482495)
chr4 (91-154)||(33915725-33915789)
chr4 (183-227)||(53296071-53296115)
chr4 (90-164)||(11027695-11027770)
chr4 (93-171)||(37348749-37348828)
chr4 (91-165)||(43892135-43892210)
chr4 (92-164)||(30034260-30034333)
chr4 (198-235)||(42584458-42584495)
chr4 (91-163)||(42774385-42774458)
chr4 (92-171)||(16217058-16217138)
chr4 (93-164)||(39046583-39046655)
chr4 (92-171)||(48459111-48459191)
chr4 (92-147)||(53906691-53906747)
chr4 (93-171)||(29755721-29755800)
chr4 (193-239)||(11298267-11298313)
chr4 (133-171)||(44317211-44317249)
chr4 (91-159)||(1724712-1724781)
chr4 (189-230)||(5775206-5775247)
chr4 (189-229)||(2538860-2538900)
chr4 (92-164)||(12076085-12076157)
chr4 (92-171)||(24475258-24475338)
[»] scaffold0014 (1 HSPs)
scaffold0014 (92-171)||(14533-14613)
[»] chr3 (23 HSPs)
chr3 (92-172)||(23580447-23580527)
chr3 (92-171)||(7470167-7470246)
chr3 (91-171)||(39728300-39728381)
chr3 (92-171)||(41937438-41937518)
chr3 (90-171)||(30616693-30616775)
chr3 (177-235)||(50691035-50691093)
chr3 (92-163)||(23547375-23547447)
chr3 (92-171)||(34025578-34025658)
chr3 (92-171)||(44162403-44162483)
chr3 (92-171)||(44252360-44252440)
chr3 (92-165)||(6738767-6738841)
chr3 (92-171)||(44638894-44638974)
chr3 (89-171)||(44107188-44107271)
chr3 (92-165)||(39655658-39655732)
chr3 (91-171)||(49579682-49579763)
chr3 (92-171)||(29283955-29284034)
chr3 (92-171)||(34154035-34154115)
chr3 (92-171)||(48391199-48391279)
chr3 (96-171)||(55439068-55439144)
chr3 (97-171)||(17146539-17146611)
chr3 (130-171)||(16841651-16841692)
chr3 (95-171)||(19111358-19111435)
chr3 (92-163)||(23154404-23154476)
[»] chr8 (30 HSPs)
chr8 (101-170)||(18151083-18151153)
chr8 (92-171)||(17220336-17220416)
chr8 (92-171)||(32302679-32302759)
chr8 (92-170)||(9642757-9642836)
chr8 (92-163)||(28345051-28345122)
chr8 (90-171)||(20399253-20399335)
chr8 (92-171)||(6388954-6389035)
chr8 (91-171)||(14185962-14186043)
chr8 (92-171)||(2076225-2076305)
chr8 (92-159)||(4231120-4231188)
chr8 (92-171)||(24927568-24927648)
chr8 (92-171)||(27058719-27058799)
chr8 (92-171)||(33633371-33633451)
chr8 (92-171)||(34301543-34301623)
chr8 (93-171)||(27932055-27932134)
chr8 (92-171)||(1012250-1012330)
chr8 (92-171)||(5858846-5858926)
chr8 (92-171)||(17084559-17084639)
chr8 (92-171)||(28977503-28977583)
chr8 (92-171)||(45235689-45235769)
chr8 (93-171)||(29109207-29109286)
chr8 (90-171)||(29918197-29918280)
chr8 (183-227)||(14292451-14292495)
chr8 (92-163)||(17468875-17468947)
chr8 (93-171)||(9434651-9434730)
chr8 (95-165)||(31323491-31323562)
chr8 (14-51)||(37861759-37861796)
chr8 (177-209)||(10089155-10089187)
chr8 (92-171)||(24870412-24870492)
chr8 (92-163)||(40248739-40248811)
[»] chr7 (34 HSPs)
chr7 (90-171)||(10996236-10996318)
chr7 (92-171)||(25980313-25980392)
chr7 (89-171)||(37181895-37181977)
chr7 (92-171)||(7779631-7779711)
chr7 (92-171)||(45886154-45886234)
chr7 (102-171)||(3773636-3773706)
chr7 (91-171)||(10072111-10072192)
chr7 (92-171)||(5567530-5567610)
chr7 (90-165)||(21702301-21702377)
chr7 (91-171)||(33840697-33840778)
chr7 (92-171)||(17851489-17851569)
chr7 (91-171)||(35074092-35074172)
chr7 (92-171)||(43507057-43507137)
chr7 (92-145)||(45709267-45709321)
chr7 (92-164)||(18125624-18125697)
chr7 (91-171)||(18826259-18826339)
chr7 (91-171)||(46127552-46127633)
chr7 (92-171)||(16865793-16865873)
chr7 (92-171)||(30650254-30650334)
chr7 (92-171)||(37217583-37217663)
chr7 (92-171)||(37578887-37578967)
chr7 (92-171)||(38152524-38152604)
chr7 (92-163)||(44658637-44658709)
chr7 (92-171)||(44986286-44986366)
chr7 (183-217)||(14100218-14100252)
chr7 (183-217)||(14410235-14410269)
chr7 (90-171)||(25783290-25783371)
chr7 (92-164)||(25905252-25905325)
chr7 (92-164)||(27062680-27062753)
chr7 (91-171)||(38140179-38140260)
chr7 (91-171)||(42908440-42908521)
chr7 (92-171)||(2632357-2632436)
chr7 (133-165)||(4101139-4101171)
chr7 (92-171)||(43550867-43550947)
[»] chr6 (23 HSPs)
chr6 (90-164)||(24225318-24225392)
chr6 (90-171)||(5863761-5863843)
chr6 (91-171)||(32853462-32853543)
chr6 (92-171)||(3484312-3484392)
chr6 (92-171)||(10188463-10188543)
chr6 (92-171)||(12141016-12141096)
chr6 (92-163)||(27534314-27534386)
chr6 (91-171)||(2366944-2367025)
chr6 (91-170)||(8321233-8321313)
chr6 (92-171)||(14505718-14505798)
chr6 (91-171)||(29200291-29200370)
chr6 (92-171)||(29342448-29342528)
chr6 (94-171)||(33061978-33062056)
chr6 (92-171)||(9442268-9442348)
chr6 (92-171)||(29340391-29340471)
chr6 (92-171)||(32052675-32052755)
chr6 (96-171)||(34179458-34179534)
chr6 (135-170)||(3245014-3245049)
chr6 (190-231)||(6353989-6354031)
chr6 (24-53)||(7624423-7624452)
chr6 (95-171)||(9402165-9402242)
chr6 (92-171)||(9458317-9458397)
chr6 (92-171)||(11762065-11762145)
[»] chr5 (25 HSPs)
chr5 (94-171)||(3565109-3565186)
chr5 (92-171)||(40517426-40517506)
chr5 (92-166)||(27900856-27900931)
chr5 (92-171)||(15889830-15889910)
chr5 (92-171)||(17853669-17853749)
chr5 (92-171)||(30996217-30996297)
chr5 (177-227)||(612207-612257)
chr5 (95-171)||(1218409-1218486)
chr5 (92-164)||(24207259-24207332)
chr5 (92-160)||(38972484-38972553)
chr5 (92-171)||(18452337-18452416)
chr5 (93-171)||(10822928-10823006)
chr5 (92-171)||(20973875-20973955)
chr5 (92-171)||(23045403-23045483)
chr5 (91-170)||(35311435-35311515)
chr5 (96-163)||(38006868-38006936)
chr5 (89-171)||(3572840-3572923)
chr5 (115-171)||(5909072-5909129)
chr5 (90-171)||(10126724-10126805)
chr5 (92-164)||(22695298-22695371)
chr5 (92-160)||(33862590-33862659)
chr5 (91-135)||(4582838-4582882)
chr5 (92-171)||(6093495-6093575)
chr5 (189-233)||(10648609-10648653)
chr5 (92-171)||(28045271-28045351)
[»] chr1 (26 HSPs)
chr1 (87-171)||(51421509-51421594)
chr1 (92-171)||(20774251-20774331)
chr1 (189-233)||(39717381-39717425)
chr1 (94-171)||(44792626-44792704)
chr1 (95-171)||(41479566-41479643)
chr1 (92-171)||(24710477-24710557)
chr1 (92-171)||(28297552-28297632)
chr1 (92-171)||(40087847-40087927)
chr1 (93-171)||(23493714-23493793)
chr1 (94-171)||(44615865-44615943)
chr1 (91-163)||(13390073-13390146)
chr1 (92-164)||(34610693-34610766)
chr1 (92-171)||(14892325-14892405)
chr1 (92-163)||(25155293-25155365)
chr1 (92-171)||(29871673-29871753)
chr1 (92-171)||(36187611-36187691)
chr1 (91-165)||(23966476-23966551)
chr1 (93-171)||(34673648-34673727)
chr1 (177-235)||(42250203-42250262)
chr1 (92-165)||(5180670-5180744)
chr1 (92-160)||(49251132-49251201)
chr1 (92-171)||(17092349-17092429)
chr1 (92-171)||(18354460-18354540)
chr1 (92-163)||(34060411-34060483)
chr1 (92-171)||(45866575-45866655)
chr1 (92-171)||(9983275-9983355)
[»] chr2 (25 HSPs)
chr2 (91-171)||(7315039-7315120)
chr2 (92-171)||(10920282-10920362)
chr2 (89-164)||(11009132-11009208)
chr2 (92-171)||(13830355-13830435)
chr2 (92-171)||(37999105-37999184)
chr2 (91-171)||(25209941-25210022)
chr2 (92-171)||(15546313-15546393)
chr2 (92-171)||(36128497-36128577)
chr2 (90-163)||(30846562-30846636)
chr2 (92-171)||(6028278-6028358)
chr2 (92-171)||(10208819-10208899)
chr2 (93-164)||(13954306-13954378)
chr2 (93-164)||(14095513-14095585)
chr2 (92-171)||(31942544-31942624)
chr2 (92-159)||(45256443-45256511)
chr2 (194-256)||(17886078-17886140)
chr2 (96-165)||(35248836-35248906)
chr2 (91-171)||(16227079-16227160)
chr2 (97-171)||(9632022-9632097)
chr2 (90-159)||(14331160-14331230)
chr2 (94-171)||(18106468-18106545)
chr2 (91-163)||(29657192-29657265)
chr2 (15-51)||(6896034-6896070)
chr2 (177-233)||(27246911-27246967)
chr2 (92-155)||(35409618-35409682)
[»] scaffold0189 (1 HSPs)
scaffold0189 (92-164)||(3877-3950)
[»] scaffold0036 (1 HSPs)
scaffold0036 (92-171)||(33014-33094)
[»] scaffold0007 (1 HSPs)
scaffold0007 (92-171)||(199182-199262)
[»] scaffold0022 (1 HSPs)
scaffold0022 (91-171)||(90215-90296)
[»] scaffold1630 (1 HSPs)
scaffold1630 (92-171)||(1242-1322)
[»] scaffold0294 (1 HSPs)
scaffold0294 (92-171)||(14396-14476)
[»] scaffold0280 (1 HSPs)
scaffold0280 (19-51)||(13882-13914)
[»] scaffold0198 (1 HSPs)
scaffold0198 (92-155)||(3741-3805)


Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 261
Target Start/End: Complemental strand, 39772264 - 39772021
Alignment:
Q  18 caaagggtgcgtttgatttgcaaaacagtaagtaagtaccgtacaaactagtactagataggaccaaacactactaggcatggcaatggggtggggtgga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  39772264 caaagggtgcgtttgatttgcaaaacagtaagtaagtaccgtacaaactagtactagataggaccaaacagtaccaggcatggcaatggggtggggtgga 39772165  T
Q  118 gacggattttactttcccgtccccataccctactctcatatacttacctgttacagtacagagagaatatattttatgttggaaaataaaaagggtattt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39772164 gacggattttactttcccgtccccataccctactctcatatacttacctgttacagtacagagagaatatattttatgttggaaaataaaaagggtattt 39772065  T
Q  218 tggtatttttgatagtctatatgtcggacaaaaagttgtctctg 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  39772064 tggtatttttgatagtctatatgtcggacaaaaagttgtctctg 39772021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 7608595 - 7608675
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| |||||| ||||| |||||||||||| | |||||||||||||||||||||    
T  7608595 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacctgttac 7608675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 11123337 - 11123257
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| ||||| ||||||||| | |||||||||||||||||||||    
T  11123337 taggcatggcaatggggcggggtggggacgggttttaccttccccgttcccatacccgattctcatatacttacctgttac 11123257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 26564456 - 26564536
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| |||||| |||||||||| ||||||  | |||||||||||||||||||||    
T  26564456 taggcatggcaatggggcggggtggggacgggttttacatttcccgtcctcatacctgattctcatatacttacctgttac 26564536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 44887531 - 44887611
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| || ||||||||| ||||| |||| ||||||| | |||||||||||||||||||||    
T  44887531 taggcatggcaatggggcggggtggggatggattttaccttccctgtcctcatacccgattctcatatacttacctgttac 44887611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 33969072 - 33969119
Alignment:
Q  191 ttatgttggaaaataaaaagggtattttggtatttttgatagtctata 238  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  33969072 ttatgttggaaaataaaaagggcattttggtatttttgatagtctata 33969119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 42907430 - 42907513
Alignment:
Q  89 tactaggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||||||||||||||||| | ||||| ||| ||||| | ||||| ||| ||||||||||||||| |||||    
T  42907430 tactaggcatggcaatggggtggggtggagactggttttaccttccccgttcgcatacactattctcatatacttacccgttac 42907513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 15987701 - 15987619
Alignment:
Q  90 actaggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||||| ||||||| ||||  |||||| |||| ||||||||||| | | |||||||||||||||||||||    
T  15987701 actaggcatggcaatggggcggggtggggacgagttttaccttcctcgtccccatactcgattctcatatacttacctgttac 15987619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 47550825 - 47550743
Alignment:
Q  90 actaggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||||| ||||||| ||||| ||||| ||| ||||||||||||||| | |||| |||||||||| |||||    
T  47550825 actaggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcgtatacttacccgttac 47550743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 36918689 - 36918770
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||  || ||||||| || |  |||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  36918689 ctaggcatggcaatcaggcggggtggggatgagttttaccttccccgtccccataccctactctcatatacttacctgttac 36918770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 21423486 - 21423566
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||| | |||||| |||| ||||||||||||| | ||||||||||||||| |||||    
T  21423486 taggcatggcaatggggcggggtggggacaggttttacatttctcgtccccatacccgattctcatatacttacccgttac 21423566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 55827093 - 55827013
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| ||||||||||||||  | ||||||||||||| |||||||    
T  55827093 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccataccggattctcatatacttatctgttac 55827013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 29615234 - 29615159
Alignment:
Q  184 atatattttatgttggaaaataaaaagggtattttggtatttttgatagtctatatgtcggacaaaaagttgtctc 259  Q
    |||| |||||||||||||||||| |||  ||||||||||||||||||||| | | ||| ||||||| |||||||||    
T  29615234 atattttttatgttggaaaataagaagaatattttggtatttttgatagtttgtgtgttggacaaagagttgtctc 29615159  T

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Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 31919025 - 31918950
Alignment:
Q  97 atggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||| ||||||| ||||| |||||| ||||| |||||||||||| | ||||||||||||||| |||||    
T  31919025 atggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttac 31918950  T

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Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 6382746 - 6382664
Alignment:
Q  90 actaggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||||| ||||||| ||| | ||||| ||| |||| |||||||||| | ||||||||||||||| |||||    
T  6382746 actaggcatggcaatggggcggggtggggaccggttttaccttccccgcccccatacccgattctcatatacttacccgttac 6382664  T

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Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 31752163 - 31752244
Alignment:
Q  90 actaggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgtta 170  Q
    ||||||||||| ||||||||||| ||| || || |||||| |||| ||||||||||||| | ||||||||||||||| ||||    
T  31752163 actaggcatggtaatggggtgggatggggatgggttttaccttcctcgtccccatacccgattctcatatacttacccgtta 31752244  T

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Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 3737422 - 3737502
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| |||||| ||| || |||||||||| || ||||||||| ||||| |||||    
T  3737422 taggcatggcaatggggcggggtggggacgggttttaccttctccatccccataccatattctcatatatttacccgttac 3737502  T

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Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 4766785 - 4766705
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||| || ||||||| ||||  |||||| ||||| ||||||||| || | |||||||||||||||||||||    
T  4766785 taggcatggcaatgaggcggggtggggacgtgttttaccttccccgtccccatatccgattctcatatacttacctgttac 4766705  T

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Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 5903084 - 5903004
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||| ||| ||||||| ||||| ||||| ||| ||| ||||||||||| | ||||||||||||||| |||||    
T  5903084 taggcatggcaattgggcggggtggggacgggttttaccttccccatccccatacccgattctcatatacttacccgttac 5903004  T

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Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 6482495 - 6482415
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||| ||||||| ||||||| ||||| |||||| ||||| || ||||||||| | ||||||||||||||| |||||    
T  6482495 taggcatggtaatggggcggggtggggacgggttttacattccccgttcccatacccgattctcatatacttacccgttac 6482415  T

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Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 33915725 - 33915789
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctc 154  Q
    |||||||||||||| |||||| |||| |||||||||||| |||| ||||| ||||||||||||||    
T  33915725 ctaggcatggcaattgggtggagtggggacggattttaccttccgcgtcctcataccctactctc 33915789  T

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Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 53296071 - 53296115
Alignment:
Q  183 aatatattttatgttggaaaataaaaagggtattttggtattttt 227  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||    
T  53296071 aatatattttaggttggaaaataaaaagggtcttttggtattttt 53296115  T

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Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 11027695 - 11027770
Alignment:
Q  90 actaggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttac 164  Q
    ||||||||||||||||||| ||||||| ||||| ||||| ||| ||||||| ||||||  | ||||||||||||||    
T  11027695 actaggcatggcaatggggcggggtggggacgggttttaccttccccgtcctcatacctgattctcatatacttac 11027770  T

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Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 37348749 - 37348828
Alignment:
Q  93 aggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||| |||||||| ||||| | ||||| |||||| ||| |||||||||||||| | |||| ||||||||||||||||    
T  37348749 aggcatgacaatggggcggggtagggacgggttttacattctccgtccccatacccgattctcttatacttacctgttac 37348828  T

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Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 43892135 - 43892210
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacc 165  Q
    |||||||||||||||||  ||| ||| ||||||||||| ||| |||||| |||||||| | |||||||||||||||    
T  43892135 ctaggcatggcaatgggacgggatggggacggattttaccttccccgtctccatacccaattctcatatacttacc 43892210  T

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Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 30034260 - 30034333
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttac 164  Q
    |||||||| |||| | | ||||||| ||||| |||||| |||| ||||||||||||||||||||| ||||||||    
T  30034260 taggcatgacaatcgagcggggtggggacgggttttaccttccacgtccccataccctactctcacatacttac 30034333  T

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Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 42584495 - 42584458
Alignment:
Q  198 ggaaaataaaaagggtattttggtatttttgatagtct 235  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  42584495 ggaaaataaaatgggtattttggtatttttgatagtct 42584458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 42774385 - 42774458
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatactta 163  Q
    |||||||||||||||||| ||||| | ||||| |||||| |||| |||||||||| || | |||||||||||||    
T  42774385 ctaggcatggcaatggggcggggtagggacgggttttaccttccacgtccccatatccaattctcatatactta 42774458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 16217138 - 16217058
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||  || || |||||| ||||| ||||||||| || | ||||||||||||||| |||||    
T  16217138 taggcatggcaatggggcggggtgcggaagggttttaccttccccgtccccatatccgattctcatatacttacccgttac 16217058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 39046583 - 39046655
Alignment:
Q  93 aggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttac 164  Q
    ||||||| |||||||  ||||||| ||||| |||||| |||||||||||||||||| | ||| ||||||||||    
T  39046583 aggcatgacaatgggacggggtggggacgggttttacctttcccgtccccatacccgattcttatatacttac 39046655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 48459111 - 48459191
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||| |||||||  ||||||| ||||| |||||| ||| || ||||||||||| | ||||||||||||||| |||||    
T  48459111 taggcatgacaatgggaaggggtggggacgggttttaccttctccatccccatacccgattctcatatacttacccgttac 48459191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 53906747 - 53906691
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccc 147  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||||| || ||||||||    
T  53906747 taggcatggcaatggggtggggtggggacgggttttacctttcccatctccataccc 53906691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 29755800 - 29755721
Alignment:
Q  93 aggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||  |||||| ||| | |||||| ||||| |||||||||||| | ||||||| ||||||| |||||    
T  29755800 aggcatggcaatggggcagggtggggacaggttttacattccccgtccccatacccgattctcatacacttacccgttac 29755721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 11298313 - 11298267
Alignment:
Q  193 atgttggaaaataaaaagggtattttggtatttttgatagtctatat 239  Q
    |||||| ||||| |||| |||||||| ||||||||||||||||||||    
T  11298313 atgttgaaaaatgaaaatggtattttagtatttttgatagtctatat 11298267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 44317211 - 44317249
Alignment:
Q  133 cccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  44317211 cccgtccccatacccgattctcatatacttacctgttac 44317249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 1724781 - 1724712
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatata 159  Q
    |||||||||||||||||| ||||||| ||||| |||| | || |||||||| |||||| | |||||||||    
T  1724781 ctaggcatggcaatggggcggggtggggacgggttttgcattccccgtcccaatacccgattctcatata 1724712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 5775247 - 5775206
Alignment:
Q  189 ttttatgttggaaaataaaaagggtattttggtatttttgat 230  Q
    |||||||||| |||||||||||||||||||||| || |||||    
T  5775247 ttttatgttgtaaaataaaaagggtattttggttttcttgat 5775206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 2538900 - 2538860
Alignment:
Q  189 ttttatgttggaaaataaaaagggtattttggtatttttga 229  Q
    ||||||||| ||||| ||||| |||||||||||||||||||    
T  2538900 ttttatgttagaaaaaaaaaatggtattttggtatttttga 2538860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 12076157 - 12076085
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcccgtccccataccctactctcatatacttac 164  Q
    ||||||||||||| ||||||||||  ||||  |||||| ||||||| | |||||||||  |||||||| ||||    
T  12076157 taggcatggcaatagggtggggtgtggacgagttttaccttcccgttctcataccctatcctcatatagttac 12076085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 24475338 - 24475258
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||| ||||||||||||||||||| |  |||||| ||| ||||| ||||||  |||||| | ||||||| |||||||    
T  24475338 taggcatgacaatggggtggggtggagatgagttttaccttctccgtctccatactttactcttaaatacttatctgttac 24475258  T

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Target: scaffold0014 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 14613 - 14533
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| |||||||||||| || ||||||||||||||| | |||||||||||||||||||||    
T  14613 taggcatggcaatggggcggggtggggacggattttacattccccgtccccatacccgattctcatatacttacctgttac 14533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 23580447 - 23580527
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcccgtccccataccctactctcatatacttacctgttaca 172  Q
    ||||||||||||| || |||||||| ||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  23580447 taggcatggcaataggatggggtggggacgggttttaccttcccgtccccatacccgattctcatatacttacctgttaca 23580527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 7470246 - 7470167
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||| | ||||||||||||||| |||||    
T  7470246 taggcatggcaatggggcggggtggggacgggttttaccttcccgtccccatacccgattctcatatacttacccgttac 7470167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 39728300 - 39728381
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||| ||||||| ||||  |||||| ||||| |||||||||||| | |||||||||||||||||||||    
T  39728300 ctaggcatggcaatggggcggggtggggacgagttttaccttccccgtccccatacccgattctcatatacttacctgttac 39728381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 41937518 - 41937438
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||||||||||| ||||| |||||| || |||||| |||||||| | ||||||||| |||||||||||    
T  41937518 taggcatggcaatggggtggggtggggacgggttttacattccccgtctccatacccgattctcatatatttacctgttac 41937438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 30616775 - 30616693
Alignment:
Q  90 actaggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||||| ||||||| ||||| ||||| | | ||| ||||||||||||| |||||||||||||| ||||||    
T  30616775 actaggcatggcaatggggcggggtggggacgggttttaccatccccatccccataccctattctcatatacttacttgttac 30616693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 50691035 - 50691093
Alignment:
Q  177 agagagaatatattttatgttggaaaataaaaagggtattttggtatttttgatagtct 235  Q
    ||||| ||||| |||||||||||| |||||||||||||||||| |||||||||||||||    
T  50691035 agagataatattttttatgttggataataaaaagggtattttgatatttttgatagtct 50691093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 23547447 - 23547375
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatactta 163  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| ||||||||||||||| | |||||||||||||    
T  23547447 taggcatggcaatggggcggggtggggacgggttttatcttccccgtccccatacccgattctcatatactta 23547375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 34025578 - 34025658
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| || |||| |||||||||||| ||| |||||||||||||  | ||||||||||||||| |||||    
T  34025578 taggcatggcaatggggcggagtggggacggattttaccttctccgtccccatacctgattctcatatacttacccgttac 34025658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 44162403 - 44162483
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||  |||||| ||||| |||||||||||| | ||||||||||||||| |||||    
T  44162403 taggcatggcaatggggcggggtggggacgagttttaccttccccgtccccatacccgattctcatatacttacccgttac 44162483  T

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Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 44252360 - 44252440
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||  |||||| ||||  |||||| |||||||||||||||||| | ||||||||||||||| |||||    
T  44252360 taggcatggcaatggggcagggtggggacgagttttacctttcccgtccccatacccgattctcatatacttacccgttac 44252440  T

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Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 6738841 - 6738767
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacc 165  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| ||||| ||||||||| | |||||||||||||||    
T  6738841 taggcatggcaatggggcggggtggggacgggttttaccttccccgttcccatacccgattctcatatacttacc 6738767  T

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Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 44638894 - 44638974
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||| ||||| || ||||||| ||||| |||||| ||||| |||||||||||| | ||||||||||||||| |||||    
T  44638894 taggcatgacaatgtggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttac 44638974  T

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Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 171
Target Start/End: Complemental strand, 44107271 - 44107188
Alignment:
Q  89 tactaggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||| | ||||||| ||||  |||||| ||||| |||| ||||||| | ||||||||||||||| |||||    
T  44107271 tactaggcatggcaatggagcggggtggggacgagttttaccttccccgtcctcatacccgattctcatatacttacccgttac 44107188  T

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Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 39655732 - 39655658
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacc 165  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| |||||||||||||   | |||||||||||||||    
T  39655732 taggcatggcaatggggcggggtggggacggtttttaccttccccgtccccatacatgattctcatatacttacc 39655658  T

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Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 49579682 - 49579763
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||| || |||| ||||| ||||| ||| ||||||||||||||  | |||||| |||||||| |||||    
T  49579682 ctaggcatggcaatggggcggagtggggacgggttttaccttccccgtccccatacctgattctcatgtacttacccgttac 49579763  T

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Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 29283955 - 29284034
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||  ||||||| ||||| |||||| ||| |||||| ||||||| | ||||||||||||||| |||||    
T  29283955 taggcatggcaatgggc-ggggtggggacgggttttaccttctccgtcctcatacccgattctcatatacttacccgttac 29284034  T

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Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 34154035 - 34154115
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||| |||||||| ||||||| ||||| |||||| ||||| |||||| ||||| | || |||||||||||| |||||    
T  34154035 taggcatgacaatggggcggggtggggacgggttttaccttccccgtccccgtacccgattcacatatacttacccgttac 34154115  T

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Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 48391279 - 48391199
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| ||||| | | ||| |||||||  || | |||||||||||||||||||||    
T  48391279 taggcatggcaatggggcggggtggggacgggttttaccctccccatccccatgtccgattctcatatacttacctgttac 48391199  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 55439144 - 55439068
Alignment:
Q  96 catggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||| | |||||| |||| |||||| |||| |||||||||| || | ||||||||||||||| |||||    
T  55439144 catggcaatggggcgaggtggatacgggttttacattcctcgtccccatatccgattctcatatacttacccgttac 55439068  T

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Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 17146611 - 17146539
Alignment:
Q  97 atggcaatggggtggggtggagacggattttactttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||| || ||||||| ||||| ||||  || ||||||||||||||| | ||||||||||||||| |||||    
T  17146611 atggcaatgaggcggggtggggacgggtttt--ttccccgtccccatacccgattctcatatacttacccgttac 17146539  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 16841692 - 16841651
Alignment:
Q  130 tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||| |||||| | |||||||||||||||||||||    
T  16841692 tttcccgtcccaatacccgattctcatatacttacctgttac 16841651  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 19111358 - 19111435
Alignment:
Q  95 gcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||| | || || ||||| |||||| |||| |||||||||||||   |||||||||||||| ||||||    
T  19111358 gcatggcaatggggcgtggaggggacgggttttacattcctcgtccccatacccggttctcatatacttacatgttac 19111435  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 23154476 - 23154404
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatactta 163  Q
    ||||||||||||| ||||||||||| ||||| ||||| ||| ||||| |  |||||| | |||||||||||||    
T  23154476 taggcatggcaatagggtggggtggggacgggttttaccttccccgttcttatacccgattctcatatactta 23154404  T

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Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 18151083 - 18151153
Alignment:
Q  101 caatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgtta 170  Q
    |||||||||||||||| |||| ||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  18151083 caatggggtggggtggggacgaattttaccttccctgtccccataccctactctcatatacttacctgtta 18151153  T

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Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 17220336 - 17220416
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| |||||| ||| |||||||||||||| | ||||||||||||||| |||||    
T  17220336 taggcatggcaatggggcggggtggggacgggttttaccttctccgtccccatacccgattctcatatacttacccgttac 17220416  T

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Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 32302679 - 32302759
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| ||||||||||||||| | ||||||||||||||| |||||    
T  32302679 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttac 32302759  T

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Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 9642836 - 9642757
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgtta 170  Q
    ||||||||||||||||||||||||| ||||| ||||| ||| ||| ||||||||| ||| ||||||||||||||| ||||    
T  9642836 taggcatggcaatggggtggggtggggacgggttttaccttccccatccccatactctattctcatatacttacccgtta 9642757  T

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Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 28345051 - 28345122
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcccgtccccataccctactctcatatactta 163  Q
    ||||||||||||||||| ||||||| ||||| |||||| |||||||||| |||||||||||||  |||||||    
T  28345051 taggcatggcaatggggcggggtggtgacgggttttaccttcccgtccctataccctactctcgaatactta 28345122  T

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Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 20399253 - 20399335
Alignment:
Q  90 actaggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||||| ||||||| || || |||||| |||| ||||||||||||| | |||||||||||||||| ||||    
T  20399253 actaggcatggcaatggggcggggtggggaagggttttacattcctcgtccccatacccaattctcatatacttacctattac 20399335  T

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Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 6389035 - 6388954
Alignment:
Q  92 taggcatggcaatggggtgggg-tggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||| || |||| ||| ||||| |||||| ||||| |||||||||| |||||||||||||||||||||||||    
T  6389035 taggcatggcaatgaggcgggggtggggacgggttttaccttccccgtccccatactctactctcatatacttacctgttac 6388954  T

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Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 14185962 - 14186043
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||| ||||||| ||||  |||||| ||||| |||||||||||| | ||||||||||||||| |||||    
T  14185962 ctaggcatggcaatggggcggggtggggacgagttttacattccccgtccccatacccaattctcatatacttacccgttac 14186043  T

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Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 2076305 - 2076225
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| | ||||| ||||| |||||| ||||| |||||||||||| | ||||||||||||||| |||||    
T  2076305 taggcatggcaatggggcgcggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttac 2076225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 4231188 - 4231120
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatata 159  Q
    ||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||| | |||||||||    
T  4231188 taggcatggcaatggggtggggtggggacgggttttaccttctccgtccccatacccgattctcatata 4231120  T

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Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 24927568 - 24927648
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||  ||||||| ||||| |||||| ||||| |||||||||||| | ||||||||||||||| |||||    
T  24927568 taggcatggcaatgggacggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttac 24927648  T

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Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 27058799 - 27058719
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| |||||| | ||| |||||||||| ||| ||||||||||||||| |||||    
T  27058799 taggcatggcaatggggcggggtggggacgggttttacctcccccgtccccatactctattctcatatacttacccgttac 27058719  T

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Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 33633451 - 33633371
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||| ||| ||||| |||||| |||| |||||||||||||||||| || |||||||| ||||||    
T  33633451 taggcatggcaatggggcgggatggggacgggttttaccttcctcgtccccataccctactcccaaatacttacatgttac 33633371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 34301623 - 34301543
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| ||| ||||||||||| | | |||||||||||||||||||    
T  34301623 taggcatggcaatggggcggggtggggacgggttttaccttccccatccccatacccgattatcatatacttacctgttac 34301543  T

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Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 27932055 - 27932134
Alignment:
Q  93 aggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||| ||||||| || ||||||||| |||| ||||||||||| | | ||||||||||||||| |||||    
T  27932055 aggcatggcaatggggcggggtggggatggattttaccttcctcgtccccatacgcgattctcatatacttacccgttac 27932134  T

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Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 1012250 - 1012330
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||  |||||||||||||||| ||||  |||||| |||||||||| |||| || | |||||||||||||||||||||    
T  1012250 taggcatcacaatggggtggggtggggacgagttttacatttcccgtcctcatatccgattctcatatacttacctgttac 1012330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 5858926 - 5858846
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||| | |||||| || ||||||||||||||  | ||||||||||||||| |||||    
T  5858926 taggcatggcaatggggcggggtggggacaggttttacattccccgtccccatacctgattctcatatacttacccgttac 5858846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 17084639 - 17084559
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcccg-tccccataccctactctcatatacttacctgttac 171  Q
    ||||||||| ||||||| ||||||| ||||| |||||| |||||  |||||||||||||||||||| || |||| ||||||    
T  17084639 taggcatggtaatggggcggggtggggacgggttttaccttccccatccccataccctactctcatttatttacatgttac 17084559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 28977583 - 28977503
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||  |||||  ||||| |||||||||||| | ||| |||||||||||||||||    
T  28977583 taggcatggcaatggggcggggtggggacgtgttttatcttccctgtccccatacccgattcttatatacttacctgttac 28977503  T

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Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 45235689 - 45235769
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| |||||||||||| || | |||||| |||||||| |||||    
T  45235689 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatatccgattctcatgtacttacccgttac 45235769  T

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Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 29109286 - 29109207
Alignment:
Q  93 aggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||| ||||||| ||||||||||| ||| ||||| ||||||| | | ||||||||| ||||| |||||    
T  29109286 aggcatggcaatggggcggggtggggacggattttaccttccccgttcccatactcgattctcatatatttacccgttac 29109207  T

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Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 29918197 - 29918280
Alignment:
Q  90 actaggcatggcaatggggtgggg-tggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||| | |||||| ||| ||||| ||||||||||| |||||||||||||||||||| || | |||| ||||||    
T  29918197 actaggcatggcaattgagtgggggtggggacgggttttactttcctcgtccccataccctactctcgtacatttacatgttac 29918280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 14292495 - 14292451
Alignment:
Q  183 aatatattttatgttggaaaataaaaagggtattttggtattttt 227  Q
    ||||| ||||||||||||||||||||| |||||||||||| ||||    
T  14292495 aatattttttatgttggaaaataaaaatggtattttggtactttt 14292451  T

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Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 17468875 - 17468947
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatactta 163  Q
    ||||||||||||||||| ||||||  ||||  |||||| ||||| |||||||||||| | |||||||||||||    
T  17468875 taggcatggcaatggggcggggtgaggacgagttttacattccccgtccccatacccgattctcatatactta 17468947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 9434651 - 9434730
Alignment:
Q  93 aggcatggcaatggggtggggtggagacggattttactttcccg-tccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||| |||| || ||||  |||||| |||||  ||||||||||||  ||||||||||||||| |||||    
T  9434651 aggcatggcaatggggcggggaggggacgagttttaccttccccatccccataccctgttctcatatacttacccgttac 9434730  T

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Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 31323491 - 31323562
Alignment:
Q  95 gcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacc 165  Q
    |||||||||||| | ||||||| ||||||||||| ||| ||||| | ||||||| | |||||||||||||||    
T  31323491 gcatggcaatggagcggggtggggacggattttaccttccccgttctcatacccgattctcatatacttacc 31323562  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 37861759 - 37861796
Alignment:
Q  14 atcacaaagggtgcgtttgatttgcaaaacagtaagta 51  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  37861759 atcacatagggtgtgtttgatttgcaaaacagtaagta 37861796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 10089187 - 10089155
Alignment:
Q  177 agagagaatatattttatgttggaaaataaaaa 209  Q
    ||||||||||| |||||||||||||||||||||    
T  10089187 agagagaatattttttatgttggaaaataaaaa 10089155  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 24870492 - 24870412
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||  |||||| | ||| |||||  |||| | ||||||||||| | ||||||||||||||| |||||    
T  24870492 taggcatggcaatggggcagggtgggggcgggttttatcttcctcatccccatacccgattctcatatacttacccgttac 24870412  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 40248811 - 40248739
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatactta 163  Q
    |||||||||||||||||  |||||| ||||| ||||| |||| |||||| |||| || | |||||||||||||    
T  40248811 taggcatggcaatggggcagggtggggacgggttttaccttttccgtcctcatatccgattctcatatactta 40248739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 10996318 - 10996236
Alignment:
Q  90 actaggcatggcaatggggtggggtggagacggattttactttcccg-tccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||||| ||||||| ||||| |||||| |||||  ||||||||||||| |||||||||||||||||||||    
T  10996318 actaggcatggcaatggggcggggtggggacgggttttaccttccccatccccataccctattctcatatacttacctgttac 10996236  T

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Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 25980392 - 25980313
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||||||||||| || || |||||| |||||||||||| |||| | ||||||||||||||| |||||    
T  25980392 taggcatggcaatggggtggggtggggatgggttttaccttcccgtccccaaacccgattctcatatacttacccgttac 25980313  T

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Target: chr7; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 37181895 - 37181977
Alignment:
Q  89 tactaggcatggcaatggggtggggtggagacggattttactttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||| || | ||||||||| ||| |||||||    
T  37181895 tactaggcatgacaatagggcggggtggggacggattttactttcccgtccccatatccgattctcatatatttatctgttac 37181977  T

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Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 7779631 - 7779711
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||||||||||| ||||| ||||| ||| ||||||||||||||| | |||| |||||||| |||||||    
T  7779631 taggcatggcaatggggtggggtggggacgggttttaccttccccgtccccatacccgattctcgtatacttatctgttac 7779711  T

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Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 45886234 - 45886154
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| |||||||||| || ||||| ||| |||||| |||||||| | |||||||||||||||||||||    
T  45886234 taggcatggcaatggggcggggtggagatgggttttaccttccccgtctccatacccaattctcatatacttacctgttac 45886154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 3773636 - 3773706
Alignment:
Q  102 aatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||| ||||| ||||| |||||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  3773636 aatggggtgaggtggggacgggttttacctttcccgtccccatatcctactcgcatatacttacctgttac 3773706  T

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Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 10072111 - 10072192
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttcccg-tccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||| |||||||  |||| |||||| |||||  ||||||||||| | |||||||||||||||||||||    
T  10072111 ctaggcatggcaatggggcggggtgggaacgggttttaccttccccatccccatacccgattctcatatacttacctgttac 10072192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 5567610 - 5567530
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| || |  |||||| | ||| |||||||||||||| |||||||||||||||||||||    
T  5567610 taggcatggcaatggggcggggtggggatgagttttacctcccccgtccccataccctattctcatatacttacctgttac 5567530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 21702301 - 21702377
Alignment:
Q  90 actaggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacc 165  Q
    ||||||||||||||||||| ||||||| ||||| ||||| ||| ||| ||||||||||| | |||||||||||||||    
T  21702301 actaggcatggcaatggggaggggtggggacgggttttaccttccccatccccatacccgattctcatatacttacc 21702377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 33840697 - 33840778
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||| |||||||||||| ||||||| ||||| |||||| ||| || ||||||| || || |||||||||||||||||||||    
T  33840697 ctaggtatggcaatggggcggggtggggacgggttttaccttctccatccccatgccatattctcatatacttacctgttac 33840778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 17851489 - 17851569
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| |||   |||||| ||||| |||||||||||| | ||||||||||||||| |||||    
T  17851489 taggcatggcaatggggcggggtggggacaagttttaccttccccgtccccatacccgattctcatatacttacccgttac 17851569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 35074092 - 35074172
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttcccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||| ||||||| ||||| |||||| |||||    |||||||| | ||||||||||||||| |||||    
T  35074092 ctaggcatggcaatggggcggggtggggacgggttttaccttccccgttccatacccgattctcatatacttacccgttac 35074172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 43507057 - 43507137
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||  | ||||| ||||| |||||| ||||| || ||||||||| | |||||||||||||||||||||    
T  43507057 taggcatggcaatgggacgaggtggggacgggttttaccttccccgttcccatacccgattctcatatacttacctgttac 43507137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 45709321 - 45709267
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccatac 145  Q
    |||||||||||||| |||||||||| ||||||||||| |||| ||||||||||||    
T  45709321 taggcatggcaatgaggtggggtggggacggattttaccttttccgtccccatac 45709267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 18125697 - 18125624
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttac 164  Q
    ||||||||||||||| | ||||||| ||||| |||||| ||||| || ||||||||| | ||||||||||||||    
T  18125697 taggcatggcaatggagcggggtggggacgggttttaccttccctgttcccatacccgattctcatatacttac 18125624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 18826339 - 18826259
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||| ||||||| || || |||||| |||  ||||||||||||| | ||||||||||||||| |||||    
T  18826339 ctaggcatggcaatggggcggggtgg-gaagggttttacattcttcgtccccatacccgattctcatatacttacccgttac 18826259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 46127633 - 46127552
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttcccg-tccccataccctactctcatatacttacctgttac 171  Q
    |||||||||| ||||||| |||||   |||||||||||| |||||  || |||||||| | |||||||||||||||||||||    
T  46127633 ctaggcatggtaatggggcggggtaaggacggattttacattccccatctccatacccaattctcatatacttacctgttac 46127552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 16865793 - 16865873
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| | ||||| ||||| |||||| |||| | ||||||||||| | | ||||||||||||| |||||    
T  16865793 taggcatggcaatggggcgaggtggggacgggttttaccttcctcatccccatacccgattatcatatacttacccgttac 16865873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 30650254 - 30650334
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| |||| || ||||| ||||| ||| ||| || |||||||| | ||||||||||||||| |||||    
T  30650254 taggcatggcaatggggcggggaggggacgggttttaccttccccatctccatacccgattctcatatacttacccgttac 30650334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 37217583 - 37217663
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    |||||| |||| ||||| |||| || ||||| |||||| |||| ||||||||||||| |||| |||||| |||||||||||    
T  37217583 taggcacggcattggggggggggggggacgggttttaccttcctcgtccccatacccaactcccatatatttacctgttac 37217663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 37578887 - 37578967
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||  ||||||| || ||||||||| || ||| ||||||||||| | | ||||||||||||| |||||    
T  37578887 taggcatggcaatgggacggggtggggatggattttacattccccatccccatacccgattatcatatacttacccgttac 37578967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 38152524 - 38152604
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||| |||||||| ||||||| ||||| |||||| ||||| || ||||||| | | ||||||||||||||| |||||    
T  38152524 taggcatgacaatggggcggggtggggacgggttttaccttccccgttcccatactcgattctcatatacttacccgttac 38152604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 44658709 - 44658637
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatactta 163  Q
    ||||||||||||||||| ||||||| ||||| |||||| ||||| |||||| ||||| | | |||||||||||    
T  44658709 taggcatggcaatggggcggggtggggacgggttttaccttccctgtccccgtacccgattatcatatactta 44658637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 44986366 - 44986286
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||| ||| |||||||| ||| ||| ||||  |||||| ||||| |||||||||||| | |||||||||||||||||||||    
T  44986366 taggtatgacaatggggcgggatggggacgagttttaccttccccgtccccatacccgattctcatatacttacctgttac 44986286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 14100252 - 14100218
Alignment:
Q  183 aatatattttatgttggaaaataaaaagggtattt 217  Q
    ||||||||||||||||||||||||||| |||||||    
T  14100252 aatatattttatgttggaaaataaaaatggtattt 14100218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 14410269 - 14410235
Alignment:
Q  183 aatatattttatgttggaaaataaaaagggtattt 217  Q
    ||||||||||||||||||||||||||| |||||||    
T  14410269 aatatattttatgttggaaaataaaaatggtattt 14410235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 25783371 - 25783290
Alignment:
Q  90 actaggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||| |||| |||||||| ||||||| |||| ||||||| ||||| |||||||||||  | |||||||||||||| ||||||    
T  25783371 actagacatgacaatggggcggggtgg-gacgaattttacattccctgtccccatacctgattctcatatacttacatgttac 25783290  T

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Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 25905252 - 25905325
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttac 164  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| |||||  |||||||  | ||||||||||||||    
T  25905252 taggcatggcaatggggcggggtggggacgggttttaccttccccgtttccatacctgattctcatatacttac 25905325  T

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Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 27062753 - 27062680
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttac 164  Q
    |||||||||| |||||| ||||||| ||||| |||| | |||| | ||||| | ||||||||||||||||||||    
T  27062753 taggcatggcgatggggcggggtggggacgggttttgccttcctcatccccgtcccctactctcatatacttac 27062680  T

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Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 38140260 - 38140179
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||| ||||||| ||||  |||||| |||| ||| |||||| ||   ||||||||||||||| |||||    
T  38140260 ctaggcatggcaatggggcggggtggggacgagttttaccttcctcgtacccatatccggttctcatatacttacccgttac 38140179  T

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Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 42908521 - 42908440
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttcccg-tccccataccctactctcatatacttacctgttac 171  Q
    ||||||||| |||||||| ||||||| ||||| |||| | |||||  ||||||| |||||||  |||||||||||| |||||    
T  42908521 ctaggcatgacaatggggcggggtggggacgggttttgccttccccatccccatcccctacttccatatacttacccgttac 42908440  T

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Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 2632436 - 2632357
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||  |||||| ||||| |||||| ||| ||||||| |||||  | ||||||||||||||| |||||    
T  2632436 taggcatggcaatggggcagggtggggacgggttttacattctccgtccc-atacctgattctcatatacttacccgttac 2632357  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 4101139 - 4101171
Alignment:
Q  133 cccgtccccataccctactctcatatacttacc 165  Q
    |||||||||||||||||||||||||| ||||||    
T  4101139 cccgtccccataccctactctcatatccttacc 4101171  T

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Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 43550947 - 43550867
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| || |||| ||||| ||||| ||| ||| |||  ||||||||||||| | ||| ||||||||||    
T  43550947 taggcatggcaatggggcggagtggggacgggttttaccttccccttccgtataccctactctcgtgtacctacctgttac 43550867  T

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Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 24225318 - 24225392
Alignment:
Q  90 actaggcatggcaatggggtggggtggagacggattttactttcccgtccccataccctactctcatatacttac 164  Q
    ||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||| | ||||||||||||||    
T  24225318 actaggcatggcaatggggcggggtggggacgggttttaccttcccgtccccatacccgattctcatatacttac 24225392  T

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Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 5863843 - 5863761
Alignment:
Q  90 actaggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||||| ||||||| ||||| ||||| ||| ||||||||||||||  | ||||||||||||||| |||||    
T  5863843 actaggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacctgattctcatatacttacccgttac 5863761  T

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Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 32853462 - 32853543
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||| ||||||||||||| ||||| ||| ||| ||||||||||| | | ||||||||||||| |||||    
T  32853462 ctaggcatggcaatggggcggggtggagacgggttttaccttccccatccccatacccgattatcatatacttaccagttac 32853543  T

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Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 3484392 - 3484312
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| |||||||| |||||| | ||||||||||||||| |||||    
T  3484392 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccctatacccgattctcatatacttacccgttac 3484312  T

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Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 10188543 - 10188463
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcccg-tccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||  |||||| |||||  ||||||||||| | |||||||||||||||||||||    
T  10188543 taggcatggcaatggggcggggtggggacgagttttaccttccccatccccatacccgattctcatatacttacctgttac 10188463  T

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Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 12141016 - 12141096
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||  |||||| ||||| |||||||||||| | ||||||||||||||| |||||    
T  12141016 taggcatggcaatggggcggggtggggacgagttttaccttccccgtccccatacccgattctcatatacttacccgttac 12141096  T

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Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 27534314 - 27534386
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatactta 163  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| ||||||||||||||| | |||||||||||||    
T  27534314 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatactta 27534386  T

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Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 2366944 - 2367025
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||| ||||||| ||||| |||||| |||| | |||||||| || | |||||||||||||| ||||||    
T  2366944 ctaggcatggcaatggggcggggtggggacgggttttaccttcctcatccccatatccgattctcatatacttacatgttac 2367025  T

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Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 8321313 - 8321233
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttacctgtta 170  Q
    ||||||||||||||||||||||| || ||| | |||||| ||| ||||| ||||||||||||| ||| |||||||| ||||    
T  8321313 ctaggcatggcaatggggtggggcggggactggttttaccttctccgtctccataccctactcccatgtacttacccgtta 8321233  T

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Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 14505718 - 14505798
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||| ||| | ||||| ||||| |||||| |||| ||||||||||||| | ||||||||||||||| |||||    
T  14505718 taggcatggcaattgggcgaggtggggacgggttttacattcctcgtccccatacccgattctcatatacttacccgttac 14505798  T

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Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 29200370 - 29200291
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttcccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||| |||||||||| || |||| ||||| | ||||| | |||||||| |||||||||||| |||||    
T  29200370 ctaggcatggcaatggggcggggtggagatgggtttttctttcacatcccc-tcccctactcccatatacttacccgttac 29200291  T

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Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 29342528 - 29342448
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||  || |  |||||||||||| ||||||||||||||||| |||||| |||| ||||||    
T  29342528 taggcatggcaatggggcggggtgtggaggagttttactttccctgtccccataccctactcccatatagttacttgttac 29342448  T

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Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 33061978 - 33062056
Alignment:
Q  94 ggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||| ||||| | || | ||||||| |||| ||||||||||||| | ||||||||||||||| |||||    
T  33061978 ggcatggcaatggggcggggtagggatgaattttaccttcctcgtccccatacccgattctcatatacttacccgttac 33062056  T

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Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 9442268 - 9442348
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||| |||||||  ||||||| ||||| |||||| ||||| ||| |||||||| | ||||||||||||||| |||||    
T  9442268 taggcatgacaatgggacggggtggggacgggttttaccttccccgtctccatacccgattctcatatacttacccgttac 9442348  T

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Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 29340391 - 29340471
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||  || |   ||||||||||| ||||||||||||||||| |||||| |||| ||||||    
T  29340391 taggcatggcaatggggcggggtgtggaggagatttactttccctgtccccataccctactcccatatagttacttgttac 29340471  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 32052675 - 32052755
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||| | ||| ||||||||  |||||| ||||| |||| ||||||| | ||||||||||||||| |||||    
T  32052675 taggcatggcaatggagcgggatggagacgagttttaccttccccgtcctcatacccgattctcatatacttacccgttac 32052755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 34179534 - 34179458
Alignment:
Q  96 catggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||  |||||| ||||  ||| || ||||| |||| ||||||||||||||||||||||||| |||||    
T  34179534 catggcaatggggcagggtggggacgagtttcaccttccccgtcctcataccctactctcatatacttacccgttac 34179458  T

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Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 170
Target Start/End: Original strand, 3245014 - 3245049
Alignment:
Q  135 cgtccccataccctactctcatatacttacctgtta 170  Q
    |||||||||||||||||||||||||||||| |||||    
T  3245014 cgtccccataccctactctcatatacttacttgtta 3245049  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 6354031 - 6353989
Alignment:
Q  190 tttatgttggaaaataaaaa-gggtattttggtatttttgata 231  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  6354031 tttatgttggaaaataaaaaagggaattttggtatttttgata 6353989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 53
Target Start/End: Complemental strand, 7624452 - 7624423
Alignment:
Q  24 gtgcgtttgatttgcaaaacagtaagtaag 53  Q
    ||||||||||||||||||||||||||||||    
T  7624452 gtgcgtttgatttgcaaaacagtaagtaag 7624423  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 9402165 - 9402242
Alignment:
Q  95 gcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||| ||||||| ||||||| || || |||||| ||| |||||||||||||||||||  | ||||||||| |||||    
T  9402165 gcatggtaatggggcggggtggggatggtttttaccttctccgtccccataccctactcctaaatacttacccgttac 9402242  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 9458317 - 9458397
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcccg-tccccataccctactctcatatacttacctgttac 171  Q
    |||||||| ||||| || ||||||| ||||| |||| | |||||  ||||||| |||||||| |||||||||||| |||||    
T  9458317 taggcatgccaatgaggcggggtggggacgggtttttccttccccatccccatcccctactcccatatacttacccgttac 9458397  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 11762065 - 11762145
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||  |||||| ||||| |||||| || |||||  |||||| | | ||| |||||||||||||||||    
T  11762065 taggcatggcaatggggaagggtggggacgggttttacattccccgtttccatacacgattcttatatacttacctgttac 11762145  T

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Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 3565186 - 3565109
Alignment:
Q  94 ggcatggcaatggggtggggtggagacggattttactttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||| | ||||||||||||||| |||||    
T  3565186 ggcatggcaatggggcggggtggggacgggttttaccttcccgtccccatacccgattctcatatacttacccgttac 3565109  T

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Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 40517426 - 40517506
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| || || |||||| ||||| |||||||||||| | |||||||||||||||||||||    
T  40517426 taggcatggcaatggggcggggtggggatgggttttaccttccccgtccccatacccgattctcatatacttacctgttac 40517506  T

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Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 27900931 - 27900856
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacct 166  Q
    ||||||||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||||  || ||||||||||    
T  27900931 taggcatggcaatggggcggggtggggacggattttacattttccgtccccataccctacttccacatacttacct 27900856  T

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Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 15889830 - 15889910
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| ||| |||||||| || | |||||||||||||||||||||    
T  15889830 taggcatggcaatggggcggggtggggacgggttttaccttccccatccccataaccgattctcatatacttacctgttac 15889910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 17853749 - 17853669
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||   |||||| ||||| |||||| ||||| |||||||||||| | |||||||||||||||||||||    
T  17853749 taggcatggcaatgggtcagggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacctgttac 17853669  T

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Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 30996217 - 30996297
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| |||||| ||| |||||| ||||||| | ||||||||| |||||||||||    
T  30996217 taggcatggcaatggggcggggtggggacgggttttaccttctccgtcctcatacccgattctcatatatttacctgttac 30996297  T

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Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 612207 - 612257
Alignment:
Q  177 agagagaatatattttatgttggaaaataaaaagggtattttggtattttt 227  Q
    ||||||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  612207 agagagaatattttttatgttggaaaataagaagggtagtttggtattttt 612257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 1218409 - 1218486
Alignment:
Q  95 gcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||| | ||||||| ||||| |||||| ||||| |||||||||||| | ||||||||||||||| |||||    
T  1218409 gcatggcaatggagcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttac 1218486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 24207259 - 24207332
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttac 164  Q
    ||||||||||||||||| ||||||| || || |||||| |||| | |||||||| |||||||||||||||||||    
T  24207259 taggcatggcaatggggcggggtggggatgggttttaccttcctcatccccatatcctactctcatatacttac 24207332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 38972484 - 38972553
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatac 160  Q
    ||||||||| ||||||||||||||| ||||  ||||| ||| |||||||||||||||||||| |||||||    
T  38972484 taggcatggtaatggggtggggtggggacgagttttaccttccccgtccccataccctactcccatatac 38972553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 18452416 - 18452337
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||| ||||| |||||||| || || |||||| | || |||||||||||||||||||||||||||||| ||||||    
T  18452416 taggcatggccatggg-tggggtggggatgggttttacatgcctcgtccccataccctactctcatatacttacttgttac 18452337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 10823006 - 10822928
Alignment:
Q  93 aggcatggcaatggggtggggtggagacggattttactttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||| |||||||| ||||||| ||||| |||||| | ||| |||||||| |||| | ||||||||||||| |||||    
T  10823006 aggcatgacaatggggcggggtggggacggtttttacctccccatccccatatcctattatcatatacttacccgttac 10822928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 20973955 - 20973875
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||| ||| ||||||| ||||| ||||| ||| |||||||||||| |  | ||| |||||||||||||||||    
T  20973955 taggcatggcaattgggaggggtggggacgggttttaccttccccgtccccataactgattcttatatacttacctgttac 20973875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 23045483 - 23045403
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||| ||||||| ||||||| ||||| ||||  ||| ||| ||||||| |||||||| |||||||||||| |||||    
T  23045483 taggcatggtaatggggcggggtggggacgggttttgtcttccccatccccatcccctactcccatatacttacccgttac 23045403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 35311435 - 35311515
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttacctgtta 170  Q
    |||||||||||||||||  ||||||  |||||||||||| ||| || |||||||| || | ||||||||||||||| ||||    
T  35311435 ctaggcatggcaatgggacggggtgcggacggattttaccttctccatccccatatccgattctcatatacttacccgtta 35311515  T

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Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 38006936 - 38006868
Alignment:
Q  96 catggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatactta 163  Q
    ||||||||||||||||||||| ||||| |||||| || ||||| ||||||||| | ||| |||||||||    
T  38006936 catggcaatggggtggggtggggacgggttttacattccccgttcccatacccgattcttatatactta 38006868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 171
Target Start/End: Original strand, 3572840 - 3572923
Alignment:
Q  89 tactaggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||| |||||||||| ||||| || |  |||||| ||| |||||||||||||  | ||||||||||||| |||||||    
T  3572840 tactaggcatgacaatggggtgaggtggggatgagttttacattttccgtccccatacctgattctcatatacttatctgttac 3572923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 5909129 - 5909072
Alignment:
Q  115 ggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||| |||||| ||||| |||||||||||| | ||||||||||||||| |||||    
T  5909129 ggagacgggttttaccttccccgtccccatacccgattctcatatacttacccgttac 5909072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 10126724 - 10126805
Alignment:
Q  90 actaggcatggcaatggggtggggtggagacggattttactttcccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||| |||||||| ||||||| ||||  |||||| | |||||   ||||||| | ||||||||||||||| |||||    
T  10126724 actaggcatgacaatggggcggggtggggacgagttttacctccccgttttcatacccgattctcatatacttacccgttac 10126805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 22695371 - 22695298
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttac 164  Q
    |||| ||| |||||||| ||||||| ||||| |||||| ||||| ||||| |||||| | ||||||||||||||    
T  22695371 taggaatgacaatggggcggggtggggacgggttttaccttccccgtccctatacccaattctcatatacttac 22695298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 33862659 - 33862590
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatac 160  Q
    |||||||| ||||| || ||||||| ||||| |||||| ||||| |||||||||||| | ||||||||||    
T  33862659 taggcatgacaatgaggcggggtggggacgggttttacattccccgtccccatacccgattctcatatac 33862590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 4582838 - 4582882
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttccc 135  Q
    |||||||||||||||||| ||||||| ||||| |||||| |||||    
T  4582838 ctaggcatggcaatggggcggggtggggacgggttttaccttccc 4582882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 6093575 - 6093495
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||| ||| ||||| ||||| ||| ||| ||  ||||||| | |||||||||||||| ||||||    
T  6093575 taggcatggcaatggggcgggatggggacgggttttatcttccccatcttcatacccgattctcatatacttacttgttac 6093495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 10648609 - 10648653
Alignment:
Q  189 ttttatgttggaaaataaaaagggtattttggtatttttgatagt 233  Q
    |||||||||||||||||||||| ||| |||| ||||||| |||||    
T  10648609 ttttatgttggaaaataaaaagagtaatttgatatttttaatagt 10648653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 28045271 - 28045351
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||| |||||| | | ||||| ||||| |||||| |||||| ||||||||  | | |||||||||||||||||||||    
T  28045271 taggcatgacaatggtgcgcggtggggacgggttttacctttcccatccccatattcgattctcatatacttacctgttac 28045351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 51421509 - 51421594
Alignment:
Q  87 actactaggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||| ||||||||||||||||| |||||||||||| |||| | ||||||||||| | ||||||||||||||| |||||    
T  51421509 actactaggcatcgcaatggggtggggtggggacggattttaccttcctcatccccatacccgattctcatatacttacccgttac 51421594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 20774251 - 20774331
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| ||||||||||||||| | ||||||||||||||| |||||    
T  20774251 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttac 20774331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 39717381 - 39717425
Alignment:
Q  189 ttttatgttggaaaataaaaagggtattttggtatttttgatagt 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  39717381 ttttatgttggaaaataaaaagggtattttggtatttttgatagt 39717425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 44792626 - 44792704
Alignment:
Q  94 ggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||| ||||||| ||||| |||||| ||||| |||||||||||| | ||||||||||||||| |||||    
T  44792626 ggcatggcaatggggcggggtggggacgggttttacattccccgtccccatacccgattctcatatacttacccgttac 44792704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 41479643 - 41479566
Alignment:
Q  95 gcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||||||| || || ||| || |||| ||||||||||| ||||||||||||||||| |||||||    
T  41479643 gcatggcaatggggtggggtggggatgggtttcaccttcctcgtccccatactctactctcatatacttatctgttac 41479566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 24710477 - 24710557
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||| ||| ||||||| ||||| |||||| ||||| ||| |||||||| | |||||||||||||||||||||    
T  24710477 taggcatggcaatagggcggggtggggacgggttttaccttccccgtctccatacccgattctcatatacttacctgttac 24710557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 28297552 - 28297632
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||| || ||||||| ||||| |||||| ||||| |||||||||||| | ||||||||||||||| |||||    
T  28297552 taggcatggcaatgaggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttac 28297632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 40087927 - 40087847
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||| |||||||| ||||||| ||||| |||||| ||||| |||||||||||| | ||||||||||||||| |||||    
T  40087927 taggcatgacaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttac 40087847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 23493793 - 23493714
Alignment:
Q  93 aggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||| ||| ||||||| ||||| |||||| ||||| |||||||||||| | ||||||||||||||| |||||    
T  23493793 aggcatggcaatagggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttac 23493714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 44615943 - 44615865
Alignment:
Q  94 ggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||| ||||||| ||||| |||||| || ||||||||||||||| | |||||| |||||||| |||||    
T  44615943 ggcatggcaatggggcggggtggggacgggttttacattccccgtccccatacccgattctcatgtacttacccgttac 44615865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 13390073 - 13390146
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatactta 163  Q
    ||||||||| |||||||| ||||||| ||||| |||||| ||||| |||||||||||| | |||||||||||||    
T  13390073 ctaggcatgacaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatactta 13390146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 34610693 - 34610766
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttac 164  Q
    ||||||||||||||||| ||||||| || || ||||| ||| ||||||||||||||| | ||||||||||||||    
T  34610693 taggcatggcaatggggcggggtggggatgggttttaccttccccgtccccatacccgattctcatatacttac 34610766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 14892325 - 14892405
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||| ||||   |||||| ||||| |||||| ||||| |||||||||||||| ||||||||||||||| |||||    
T  14892325 taggcatggcattgggactgggtggggacgggttttaccttccccgtccccataccctattctcatatacttacccgttac 14892405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 25155365 - 25155293
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatactta 163  Q
    |||||||||||||||||| |||||| ||||| |||||| |||  ||||||||||||||||| |||||| ||||    
T  25155365 taggcatggcaatggggtagggtggggacgggttttaccttcatcgtccccataccctactttcatatgctta 25155293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 29871753 - 29871673
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||| ||||| |||||||| |||||||||||||| ||| || || |||||||| | |||||||||||||| ||||||    
T  29871753 taggcatgacaatgaggtggggtagagacggattttacattctccatctccatacccgattctcatatacttacttgttac 29871673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 36187691 - 36187611
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| |||||||||||| || | |||| |||||||||| |||||    
T  36187691 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatatccgattctcgtatacttacccgttac 36187611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 23966476 - 23966551
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacc 165  Q
    |||||||||||||||||| ||||||| ||||  ||||| ||| |||||||||||| || | |||||||||||||||    
T  23966476 ctaggcatggcaatggggcggggtggggacgagttttaccttccccgtccccataaccgattctcatatacttacc 23966551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 34673727 - 34673648
Alignment:
Q  93 aggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||| ||||||| ||||| |||||| |||| | |||||||| || | ||||||||||||||| |||||    
T  34673727 aggcatggcaatggggcggggtggggacgggttttacattcctcatccccatatccgattctcatatacttacccgttac 34673648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 42250203 - 42250262
Alignment:
Q  177 agagagaatatatttt-atgttggaaaataaaaagggtattttggtatttttgatagtct 235  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| ||| || ||||||||    
T  42250203 agagaaaatatatttttatgttggaaaataaaaagggtattttgatatattcgatagtct 42250262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 5180670 - 5180744
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacc 165  Q
    ||||||| ||||||||||||||||| ||||  ||||| ||| |||||||| |||||| | |||||||||||||||    
T  5180670 taggcattgcaatggggtggggtggggacgagttttaccttccccgtccctatacccgattctcatatacttacc 5180744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 49251201 - 49251132
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatac 160  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| |||||||||||| || | ||||||||||    
T  49251201 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatatccgattctcatatac 49251132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 17092429 - 17092349
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| |||||| |||| ||||| |||| || | |||||||| |||||| |||||    
T  17092429 taggcatggcaatggggcggggtggggacgggttttaccttcctcgtcctcatatccgattctcatatgcttacccgttac 17092349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 18354540 - 18354460
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| |||||| | ||| || | ||||||||||||||| |||||    
T  18354540 taggcatggcaatggggcggggtggggacgggttttaccttccccgtctctatatccgattctcatatacttacccgttac 18354460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 34060483 - 34060411
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatactta 163  Q
    |||||||| |||||||| ||||||| ||||| |||||| ||||| |||||||||| | | |||||||||||||    
T  34060483 taggcatgacaatggggcggggtggggacgggttttaccttcccagtccccatactcgattctcatatactta 34060411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 45866655 - 45866575
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||  ||||| ||| ||||||| ||||| | | ||||||||||||||| |||||    
T  45866655 taggcatggcaatggggcggggtggggacgtgttttaccttccccgtcctcatactcgattctcatatacttacccgttac 45866575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 9983355 - 9983275
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||| |||  |||  |||||| ||||| ||| |||||||| | ||||| |||||||||||||||    
T  9983355 taggcatggcaatggggcgggatgggaacgagttttacattccccgtctccatacccgattctcacatacttacctgttac 9983275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 7315120 - 7315039
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||| ||||||| ||||| ||||| ||| ||||||||||||||| | ||||||||||||||| |||||    
T  7315120 ctaggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttac 7315039  T

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Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 10920282 - 10920362
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| ||| || |||||||||| |||||||||||||||||||||    
T  10920282 taggcatggcaatggggcggggtggggacgggttttatcttccccatctccataccctattctcatatacttacctgttac 10920362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 11009208 - 11009132
Alignment:
Q  89 tactaggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttac 164  Q
    |||||||||||||||||||| ||||||| ||||| ||||| ||| ||||||||||||||| | ||||||||||||||    
T  11009208 tactaggcatggcaatggggcggggtggggacgggttttatcttccccgtccccatacccgattctcatatacttac 11009132  T

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Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 13830355 - 13830435
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| ||||||||||||||| | |||||||||||||||| ||||    
T  13830355 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacctattac 13830435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 37999105 - 37999184
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||||||||||||||||| |||  ||| ||||||||||||| | | ||||||||| ||||| |||||    
T  37999105 taggcatggcaatggggtggggtggagacggttttaccttccccgtccccatactcgattctcatataattacccgttac 37999184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 25209941 - 25210022
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||||||||||  ||||  |||||| |||| ||||| ||||||||||| ||||||||||||| |||||    
T  25209941 ctaggcatggcaatggggtggggtgaggacgagttttaccttcctcgtcctcataccctactttcatatacttacccgttac 25210022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 15546313 - 15546393
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcccg-tccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||  ||||||| ||||| |||||| |||||  ||||||||||||| ||||||||||||||| |||||    
T  15546313 taggcatggcaatgggtcggggtggggacgggttttaccttccccatccccataccctattctcatatacttacccgttac 15546393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 36128577 - 36128497
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| |||||||||||| || | ||||||||||||||| |||||    
T  36128577 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatatccgattctcatatacttacccgttac 36128497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 30846562 - 30846636
Alignment:
Q  90 actaggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatactta 163  Q
    ||||||||||||||||||| ||| ||| |||| |||||| ||| ||||||||||||||| | |||||||||||||    
T  30846562 actaggcatggcaatggggcgggatggggacgaattttaccttccccgtccccatacccgattctcatatactta 30846636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 6028358 - 6028278
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||| ||||| ||||||| ||||| |||||| || ||||||||||||||| | ||| |||| ||||||||||||    
T  6028358 taggcatggcattggggcggggtggggacgggttttacattccccgtccccatacccgattcttatatccttacctgttac 6028278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 10208899 - 10208819
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||||| ||||| ||| ||||| | ||||||| | ||||||||||||||| |||||    
T  10208899 taggcatggcaatggggcggggtggggacgggttttaccttccccgttctcatacccgattctcatatacttacccgttac 10208819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 13954306 - 13954378
Alignment:
Q  93 aggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttac 164  Q
    |||||||| ||||||||||||||| || || |||||| |||| |||||||||| | |||||||||||||||||    
T  13954306 aggcatggtaatggggtggggtggggatgggttttaccttcctcgtccccatatcatactctcatatacttac 13954378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 14095513 - 14095585
Alignment:
Q  93 aggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttac 164  Q
    |||||||| ||||||||||||||| || || |||||| |||| |||||||||| | |||||||||||||||||    
T  14095513 aggcatggtaatggggtggggtggggatgggttttaccttcctcgtccccatatcatactctcatatacttac 14095585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 31942624 - 31942544
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    |||||||| |||||||| ||||||| ||||| |||||| ||||| |||||||||||| | | ||||||||||||| |||||    
T  31942624 taggcatgacaatggggcggggtggggacgggttttacattccccgtccccatacccgattatcatatacttacccgttac 31942544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 45256443 - 45256511
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatata 159  Q
    ||||||||||||||| | |||||||||||||||||||| ||| ||||||||||| || | |||||||||    
T  45256443 taggcatggcaatggagcggggtggagacggattttacattctccgtccccatatccaattctcatata 45256511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 17886140 - 17886078
Alignment:
Q  194 tgttggaaaataaaaagggtattttggtatttttgatagtctatatgtcggacaaaaagttgt 256  Q
    ||||| |||||||||||||||||||||||||||| | |||||| ||   ||||||||||||||    
T  17886140 tgttgaaaaataaaaagggtattttggtatttttaaaagtctacattgtggacaaaaagttgt 17886078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 35248906 - 35248836
Alignment:
Q  96 catggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacc 165  Q
    |||||||| |||| ||||||| ||||||||||| ||| |||||||||||||| ||||| || |||||||||    
T  35248906 catggcaaaggggcggggtggggacggattttaccttccccgtccccataccttactcccaaatacttacc 35248836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 16227160 - 16227079
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||| | ||  |||||| ||||| |||||| ||||| |||||||||||| | |||||||||||||| ||||||    
T  16227160 ctaggcatggcaacgaggcagggtggggacgggttttacattccccgtccccatacccgattctcatatacttacatgttac 16227079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 9632022 - 9632097
Alignment:
Q  97 atggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||| ||||||| ||||| ||||| ||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  9632022 atggcaatggggcggggtggggacgggttttaccttccccgttcccatacccgattcttatatacttacccgttac 9632097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 14331160 - 14331230
Alignment:
Q  90 actaggcatggcaatggggtggggtggagacggatttt-actttcccgtccccataccctactctcatata 159  Q
    ||||||||||||||||||| ||| ||| ||||||||||  ||| ||| ||||||| |||||||| ||||||    
T  14331160 actaggcatggcaatggggcgggatggggacggattttgccttccccatccccatcccctactcccatata 14331230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 18106545 - 18106468
Alignment:
Q  94 ggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||| | | ||| ||||| ||||| ||| ||||||||||||||| | |||| ||||||||||||||||    
T  18106545 ggcatggcaatggggcgtg-tggggacgggttttatcttccccgtccccatacccgattctcgtatacttacctgttac 18106468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 29657265 - 29657192
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttcccg-tccccataccctactctcatatactta 163  Q
    |||||||||||||||||||| ||| | ||| |||||||| |||||  |   |||||||||||||||||||||||    
T  29657265 ctaggcatggcaatggggtgaggtagggacagattttaccttccccattttcataccctactctcatatactta 29657192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 6896034 - 6896070
Alignment:
Q  15 tcacaaagggtgcgtttgatttgcaaaacagtaagta 51  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  6896034 tcacatagggtgcgtttggtttgcaaaacagtaagta 6896070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 27246911 - 27246967
Alignment:
Q  177 agagagaatatattttatgttggaaaataaaaagggtattttggtatttttgatagt 233  Q
    ||||| ||||| | ||||||||||| |||||||  |||||||| |||||||||||||    
T  27246911 agagataatatttgttatgttggaacataaaaaatgtattttgatatttttgatagt 27246967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 35409682 - 35409618
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctca 155  Q
    |||||||| ||||| |||||||||| || || |||||| |||||||||| |||||| ||||||||    
T  35409682 taggcatgacaatgtggtggggtggggatgggttttacctttcccgtcctcataccttactctca 35409618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 3877 - 3950
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttac 164  Q
    |||||||||||||||||  |||||| |||||||||||| ||| |||||||||||||| | ||||||||| ||||    
T  3877 taggcatggcaatggggccgggtggggacggattttaccttctccgtccccatacccgattctcatatatttac 3950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 33014 - 33094
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttac-tttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||||||| ||||||| ||| | |||||| || ||||||||||||||  | ||||||||||||||| |||||    
T  33014 taggcatggcaatggggcggggtggggacaggttttacattccccgtccccatacctgattctcatatacttacccgttac 33094  T

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Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 199262 - 199182
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttccc-gtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||| ||||||| ||||||| ||||| |||||| ||||| |||||||||||  | ||||||||||||||| |||||    
T  199262 taggcatggtaatggggcggggtggggacgggttttacattccccgtccccataccagattctcatatacttaccagttac 199182  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 171
Target Start/End: Original strand, 90215 - 90296
Alignment:
Q  91 ctaggcatggcaatggggtggggtggagacggattttactttc-ccgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||||||||||||||||| ||| ||||| |||||| ||| |||||  ||||||  | ||||||||||||||| |||||    
T  90215 ctaggcatggcaatggggtgggatggggacgggttttacattctccgtcagcatacctgattctcatatacttacccgttac 90296  T

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Target: scaffold1630 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1630
Description:

Target: scaffold1630; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 1242 - 1322
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctcatatacttacctgttac 171  Q
    ||||||||||||| ||||||||||| ||||| ||||| ||| |||||||||||  |  | ||||||||||||| |||||||    
T  1242 taggcatggcaattgggtggggtggggacgggttttaccttccccgtccccatgtctgattctcatatacttatctgttac 1322  T

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Target: scaffold0294 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 14396 - 14476
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggattttactttcc-cgtccccataccctactctcatatacttacctgttac 171  Q
    |||||||| |||||||||  ||| | |||||||||||| |||| ||||||||||| | | |||||||||||||| ||||||    
T  14396 taggcatgacaatggggtaaggttgggacggattttacattcctcgtccccatactcaattctcatatacttacttgttac 14476  T

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Target: scaffold0280 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 13914 - 13882
Alignment:
Q  19 aaagggtgcgtttgatttgcaaaacagtaagta 51  Q
    |||||||||||||||||||||||||||||||||    
T  13914 aaagggtgcgtttgatttgcaaaacagtaagta 13882  T

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Target: scaffold0198 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 3805 - 3741
Alignment:
Q  92 taggcatggcaatggggtggggtggagacggatttta-ctttcccgtccccataccctactctca 155  Q
    |||||||||||||| || ||||||| ||||| ||||| ||| |||||||||||||| ||||||||    
T  3805 taggcatggcaatgaggcggggtggggacgggttttaccttccccgtccccataccatactctca 3741  T

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