View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10782_low_17 (Length: 201)

Name: NF10782_low_17
Description: NF10782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10782_low_17
NF10782_low_17
[»] chr6 (33 HSPs)
chr6 (36-184)||(3815182-3815330)
chr6 (37-109)||(1346921-1346993)
chr6 (37-109)||(1354861-1354933)
chr6 (37-109)||(9161080-9161152)
chr6 (39-109)||(8409200-8409270)
chr6 (37-102)||(12222023-12222088)
chr6 (48-108)||(20400625-20400685)
chr6 (45-109)||(33922942-33923006)
chr6 (39-105)||(13905087-13905152)
chr6 (37-106)||(14975186-14975255)
chr6 (37-109)||(29355963-29356036)
chr6 (45-108)||(24734591-24734654)
chr6 (45-111)||(12063422-12063488)
chr6 (38-107)||(2166519-2166587)
chr6 (38-107)||(2178152-2178220)
chr6 (44-101)||(14553477-14553533)
chr6 (37-109)||(15866143-15866215)
chr6 (48-111)||(32728273-32728336)
chr6 (37-103)||(12889390-12889455)
chr6 (60-109)||(1941812-1941861)
chr6 (38-90)||(2755531-2755583)
chr6 (58-102)||(19649294-19649338)
chr6 (37-96)||(8417442-8417501)
chr6 (38-109)||(22967128-22967199)
chr6 (38-109)||(23821194-23821265)
chr6 (45-97)||(6024202-6024254)
chr6 (38-74)||(17432332-17432368)
chr6 (37-80)||(23240928-23240971)
chr6 (58-108)||(23930253-23930303)
chr6 (38-103)||(7947479-7947543)
chr6 (45-102)||(24097545-24097602)
chr6 (37-94)||(27855544-27855601)
chr6 (47-88)||(32068074-32068115)
[»] chr7 (54 HSPs)
chr7 (37-109)||(32758218-32758290)
chr7 (37-109)||(47077959-47078031)
chr7 (37-109)||(21172113-21172185)
chr7 (37-109)||(42495941-42496013)
chr7 (45-109)||(48735235-48735299)
chr7 (38-105)||(11617695-11617762)
chr7 (37-109)||(2541125-2541198)
chr7 (37-105)||(10693177-10693245)
chr7 (37-109)||(42798626-42798698)
chr7 (37-109)||(42805481-42805553)
chr7 (37-109)||(43557429-43557501)
chr7 (37-108)||(14732928-14732999)
chr7 (38-109)||(46354151-46354222)
chr7 (37-106)||(35334920-35334989)
chr7 (45-109)||(7193042-7193106)
chr7 (37-109)||(18326991-18327063)
chr7 (37-101)||(19426995-19427059)
chr7 (37-109)||(34626313-34626385)
chr7 (37-104)||(27629596-27629663)
chr7 (38-113)||(29140467-29140542)
chr7 (37-107)||(7794612-7794682)
chr7 (44-109)||(22699083-22699148)
chr7 (37-109)||(5180263-5180335)
chr7 (37-109)||(47716416-47716488)
chr7 (47-106)||(40463837-40463896)
chr7 (39-109)||(8149054-8149124)
chr7 (45-103)||(28362259-28362316)
chr7 (45-109)||(28078245-28078309)
chr7 (37-109)||(42476830-42476902)
chr7 (38-109)||(12473261-12473332)
chr7 (44-103)||(13805066-13805124)
chr7 (45-103)||(3469293-3469350)
chr7 (37-87)||(11741774-11741824)
chr7 (37-103)||(23419780-23419845)
chr7 (38-92)||(33872016-33872070)
chr7 (37-106)||(1424016-1424085)
chr7 (37-109)||(2663039-2663109)
chr7 (37-109)||(21447547-21447619)
chr7 (38-89)||(6736867-6736918)
chr7 (40-103)||(19266414-19266476)
chr7 (37-84)||(42391204-42391251)
chr7 (47-101)||(19265781-19265834)
chr7 (63-109)||(25198679-25198725)
chr7 (37-103)||(48123590-48123655)
chr7 (45-100)||(39123857-39123911)
chr7 (37-91)||(7644931-7644985)
chr7 (44-90)||(14099119-14099165)
chr7 (44-90)||(14409136-14409182)
chr7 (37-103)||(42101991-42102056)
chr7 (45-90)||(29907393-29907440)
chr7 (62-109)||(45019007-45019054)
chr7 (58-96)||(28685261-28685299)
chr7 (37-103)||(44123727-44123792)
chr7 (48-104)||(5814433-5814489)
[»] chr1 (64 HSPs)
chr1 (37-109)||(45812641-45812713)
chr1 (37-109)||(18944623-18944695)
chr1 (37-109)||(34725202-34725274)
chr1 (37-109)||(22930173-22930245)
chr1 (37-109)||(32632662-32632734)
chr1 (37-109)||(47214491-47214563)
chr1 (37-109)||(14617018-14617090)
chr1 (37-109)||(20004198-20004270)
chr1 (37-109)||(27474261-27474333)
chr1 (37-109)||(34714603-34714675)
chr1 (45-109)||(40424722-40424786)
chr1 (37-109)||(41319912-41319984)
chr1 (38-109)||(46991784-46991855)
chr1 (37-111)||(23768426-23768500)
chr1 (44-109)||(8197023-8197088)
chr1 (37-106)||(30395834-30395903)
chr1 (38-110)||(25290142-25290214)
chr1 (45-109)||(38478394-38478458)
chr1 (37-109)||(46248059-46248131)
chr1 (37-103)||(6983915-6983980)
chr1 (37-109)||(10668200-10668277)
chr1 (37-102)||(18724651-18724715)
chr1 (50-107)||(18742080-18742137)
chr1 (48-109)||(19932869-19932930)
chr1 (38-102)||(20036208-20036271)
chr1 (37-109)||(27201627-27201699)
chr1 (45-108)||(19414420-19414483)
chr1 (37-103)||(2435893-2435958)
chr1 (37-107)||(45402077-45402146)
chr1 (37-102)||(4430132-4430197)
chr1 (38-106)||(9939443-9939512)
chr1 (37-108)||(18335394-18335465)
chr1 (37-103)||(50760332-50760397)
chr1 (37-103)||(52910204-52910269)
chr1 (38-103)||(2436000-2436064)
chr1 (44-93)||(6925096-6925145)
chr1 (37-106)||(12126941-12127010)
chr1 (40-109)||(18335955-18336024)
chr1 (38-103)||(22327086-22327150)
chr1 (37-102)||(33222971-33223036)
chr1 (38-103)||(35019217-35019281)
chr1 (48-108)||(21006125-21006185)
chr1 (37-96)||(14988025-14988084)
chr1 (44-90)||(35117881-35117927)
chr1 (37-98)||(22151495-22151556)
chr1 (37-109)||(21723644-21723715)
chr1 (38-109)||(10163739-10163810)
chr1 (44-103)||(10378838-10378896)
chr1 (38-109)||(24564324-24564395)
chr1 (38-89)||(25468370-25468421)
chr1 (38-101)||(49546014-49546076)
chr1 (37-103)||(19701557-19701622)
chr1 (37-103)||(50811926-50811991)
chr1 (45-102)||(11596501-11596557)
chr1 (38-79)||(31272481-31272522)
chr1 (38-103)||(44485216-44485280)
chr1 (39-103)||(15511259-15511322)
chr1 (58-105)||(28894658-28894704)
chr1 (45-103)||(17470460-17470517)
chr1 (37-79)||(43768168-43768210)
chr1 (50-103)||(6358121-6358173)
chr1 (38-103)||(25554829-25554893)
chr1 (48-108)||(4212208-4212268)
chr1 (37-73)||(35005139-35005175)
[»] chr5 (38 HSPs)
chr5 (37-111)||(43334157-43334231)
chr5 (37-109)||(38879538-38879610)
chr5 (37-110)||(27328708-27328781)
chr5 (37-109)||(24448847-24448919)
chr5 (37-109)||(35710270-35710342)
chr5 (37-109)||(37024660-37024732)
chr5 (37-109)||(41014276-41014348)
chr5 (38-109)||(1565388-1565459)
chr5 (44-110)||(4619219-4619285)
chr5 (37-106)||(8170088-8170157)
chr5 (38-109)||(23974738-23974808)
chr5 (45-110)||(22861780-22861845)
chr5 (37-109)||(22187242-22187314)
chr5 (38-111)||(30006280-30006353)
chr5 (38-109)||(22600411-22600482)
chr5 (45-107)||(31299591-31299653)
chr5 (58-109)||(2838735-2838787)
chr5 (47-103)||(39079882-39079937)
chr5 (47-103)||(39301087-39301142)
chr5 (44-103)||(209040-209098)
chr5 (58-109)||(19438706-19438757)
chr5 (37-110)||(17419870-17419943)
chr5 (58-110)||(12006457-12006509)
chr5 (45-103)||(10634260-10634317)
chr5 (37-79)||(32703411-32703453)
chr5 (38-103)||(19143049-19143113)
chr5 (40-89)||(31694217-31694266)
chr5 (46-82)||(1850624-1850660)
chr5 (38-90)||(28516541-28516593)
chr5 (74-109)||(41956889-41956924)
chr5 (58-109)||(43574555-43574605)
chr5 (37-83)||(9794465-9794511)
chr5 (38-83)||(1405170-1405215)
chr5 (59-88)||(28208235-28208264)
chr5 (50-91)||(31362454-31362495)
chr5 (45-86)||(34074676-34074717)
chr5 (37-89)||(3771318-3771370)
chr5 (38-74)||(42924941-42924977)
[»] scaffold0168 (1 HSPs)
scaffold0168 (37-109)||(30536-30608)
[»] chr8 (40 HSPs)
chr8 (37-109)||(12670354-12670426)
chr8 (37-109)||(30454201-30454273)
chr8 (37-106)||(20869602-20869671)
chr8 (37-109)||(39461102-39461174)
chr8 (39-109)||(24245408-24245478)
chr8 (37-109)||(2626476-2626548)
chr8 (37-109)||(17823533-17823605)
chr8 (37-109)||(28817732-28817804)
chr8 (37-109)||(35261636-35261708)
chr8 (37-109)||(36720753-36720825)
chr8 (38-109)||(7136636-7136707)
chr8 (37-108)||(20284179-20284250)
chr8 (37-108)||(21070808-21070879)
chr8 (37-108)||(25250480-25250551)
chr8 (37-103)||(28407379-28407445)
chr8 (45-109)||(13160659-13160723)
chr8 (37-109)||(18164865-18164937)
chr8 (37-109)||(29521791-29521863)
chr8 (38-109)||(44530106-44530177)
chr8 (37-102)||(6760786-6760851)
chr8 (37-109)||(45071222-45071294)
chr8 (38-109)||(31454145-31454216)
chr8 (37-103)||(42083805-42083870)
chr8 (38-107)||(8897871-8897940)
chr8 (38-103)||(44781613-44781677)
chr8 (37-109)||(11748256-11748328)
chr8 (37-109)||(26954089-26954161)
chr8 (69-109)||(23286431-23286471)
chr8 (70-109)||(40605044-40605083)
chr8 (37-103)||(30962879-30962944)
chr8 (38-84)||(31457155-31457201)
chr8 (38-87)||(35105902-35105951)
chr8 (38-90)||(11001057-11001109)
chr8 (38-90)||(22598133-22598185)
chr8 (38-97)||(12625858-12625917)
chr8 (75-109)||(42840866-42840900)
chr8 (37-109)||(27634985-27635058)
chr8 (74-102)||(5688801-5688829)
chr8 (49-89)||(24365178-24365218)
chr8 (37-97)||(40607830-40607890)
[»] chr4 (61 HSPs)
chr4 (37-109)||(11054252-11054324)
chr4 (37-109)||(47528634-47528706)
chr4 (37-109)||(48598929-48599001)
chr4 (37-106)||(21646924-21646993)
chr4 (36-109)||(30639337-30639410)
chr4 (37-109)||(5306769-5306841)
chr4 (37-109)||(5648216-5648288)
chr4 (37-109)||(6430731-6430803)
chr4 (38-109)||(10660361-10660432)
chr4 (38-109)||(10874506-10874577)
chr4 (38-109)||(20224941-20225012)
chr4 (45-111)||(16911517-16911583)
chr4 (47-109)||(23501750-23501812)
chr4 (37-109)||(5313100-5313172)
chr4 (37-105)||(16408709-16408777)
chr4 (45-108)||(14590795-14590858)
chr4 (38-109)||(37494808-37494879)
chr4 (44-109)||(13256510-13256575)
chr4 (45-109)||(17315412-17315476)
chr4 (37-93)||(44363238-44363294)
chr4 (37-107)||(30352697-30352767)
chr4 (48-105)||(54966983-54967039)
chr4 (58-109)||(20405050-20405101)
chr4 (46-101)||(47441645-47441699)
chr4 (37-100)||(49938696-49938759)
chr4 (69-111)||(18969696-18969738)
chr4 (38-103)||(487242-487306)
chr4 (37-86)||(17043500-17043549)
chr4 (37-93)||(40915802-40915858)
chr4 (45-109)||(54730206-54730270)
chr4 (38-101)||(42164255-42164317)
chr4 (58-109)||(55766593-55766644)
chr4 (48-102)||(25343152-25343205)
chr4 (38-88)||(32478892-32478942)
chr4 (41-78)||(7038041-7038078)
chr4 (38-91)||(19027823-19027876)
chr4 (37-102)||(30496426-30496491)
chr4 (37-101)||(8473726-8473790)
chr4 (47-111)||(14983789-14983853)
chr4 (45-109)||(20373908-20373972)
chr4 (37-85)||(39077900-39077948)
chr4 (46-90)||(43035224-43035268)
chr4 (47-103)||(49938554-49938610)
chr4 (37-88)||(9832417-9832468)
chr4 (70-109)||(55830860-55830899)
chr4 (37-83)||(7385582-7385628)
chr4 (38-80)||(25463108-25463150)
chr4 (45-103)||(50856350-50856407)
chr4 (37-103)||(54640445-54640510)
chr4 (37-90)||(35567146-35567199)
chr4 (38-83)||(41018900-41018945)
chr4 (48-88)||(23580325-23580365)
chr4 (44-88)||(30690296-30690340)
chr4 (58-109)||(29879624-29879675)
chr4 (47-89)||(3580952-3580994)
chr4 (45-103)||(12257707-12257764)
chr4 (37-103)||(36589708-36589772)
chr4 (44-86)||(54175043-54175085)
chr4 (49-90)||(39029179-39029220)
chr4 (45-81)||(32629382-32629418)
chr4 (59-103)||(51420537-51420580)
[»] chr3 (40 HSPs)
chr3 (37-109)||(8247795-8247867)
chr3 (37-109)||(10870057-10870129)
chr3 (37-109)||(7696991-7697063)
chr3 (37-109)||(13730710-13730782)
chr3 (37-109)||(46421143-46421215)
chr3 (37-109)||(52926316-52926388)
chr3 (37-99)||(26869696-26869758)
chr3 (40-109)||(4495773-4495842)
chr3 (37-109)||(1217069-1217141)
chr3 (37-109)||(9607182-9607254)
chr3 (37-109)||(12914141-12914213)
chr3 (37-109)||(29366828-29366900)
chr3 (45-109)||(39203495-39203559)
chr3 (38-109)||(40272919-40272990)
chr3 (37-109)||(13628898-13628971)
chr3 (38-109)||(5173827-5173899)
chr3 (45-109)||(16735420-16735484)
chr3 (37-108)||(22123021-22123092)
chr3 (55-106)||(25517297-25517348)
chr3 (37-109)||(12525389-12525458)
chr3 (37-103)||(26573113-26573178)
chr3 (37-109)||(6411927-6411999)
chr3 (37-109)||(22609746-22609817)
chr3 (37-103)||(34420750-34420815)
chr3 (37-103)||(45620935-45621000)
chr3 (37-90)||(53062036-53062089)
chr3 (66-109)||(21874999-21875042)
chr3 (45-111)||(26782343-26782409)
chr3 (37-86)||(30928253-30928302)
chr3 (72-112)||(23871415-23871455)
chr3 (39-103)||(25944455-25944518)
chr3 (37-80)||(516417-516460)
chr3 (37-103)||(35417902-35417967)
chr3 (37-85)||(7942993-7943041)
chr3 (73-109)||(9276253-9276289)
chr3 (50-105)||(33235513-33235569)
chr3 (39-90)||(33075926-33075977)
chr3 (48-97)||(11461758-11461807)
chr3 (38-103)||(53996673-53996737)
chr3 (46-90)||(28904941-28904985)
[»] chr2 (48 HSPs)
chr2 (37-109)||(12024024-12024096)
chr2 (37-109)||(14530275-14530347)
chr2 (37-109)||(8455422-8455494)
chr2 (39-109)||(10543655-10543725)
chr2 (44-109)||(21779372-21779437)
chr2 (37-109)||(11514393-11514465)
chr2 (37-109)||(23397723-23397795)
chr2 (47-109)||(25079834-25079896)
chr2 (36-109)||(26684727-26684800)
chr2 (37-109)||(22371014-22371086)
chr2 (37-109)||(24200731-24200803)
chr2 (37-109)||(25249843-25249915)
chr2 (46-106)||(27573581-27573641)
chr2 (39-109)||(17705452-17705522)
chr2 (37-109)||(7214491-7214563)
chr2 (37-109)||(14544020-14544092)
chr2 (45-109)||(17896216-17896280)
chr2 (37-109)||(19977820-19977892)
chr2 (37-109)||(9671137-9671210)
chr2 (45-109)||(5840985-5841049)
chr2 (38-94)||(44604826-44604882)
chr2 (44-95)||(17667973-17668024)
chr2 (37-103)||(35017781-35017847)
chr2 (66-109)||(39189556-39189599)
chr2 (63-107)||(27466262-27466306)
chr2 (45-103)||(99377-99434)
chr2 (38-88)||(5450263-5450313)
chr2 (45-95)||(17623535-17623585)
chr2 (38-100)||(39914413-39914475)
chr2 (38-91)||(40416978-40417031)
chr2 (38-102)||(24860093-24860157)
chr2 (37-81)||(25641487-25641531)
chr2 (48-103)||(4516468-4516522)
chr2 (36-90)||(23145803-23145857)
chr2 (36-90)||(23557593-23557647)
chr2 (38-103)||(17380343-17380407)
chr2 (38-90)||(29419996-29420048)
chr2 (46-90)||(33795261-33795305)
chr2 (47-90)||(21377189-21377232)
chr2 (37-88)||(31158547-31158598)
chr2 (56-107)||(39499339-39499390)
chr2 (48-103)||(44643486-44643540)
chr2 (51-109)||(17472928-17472986)
chr2 (37-108)||(4852320-4852388)
chr2 (38-75)||(10546153-10546190)
chr2 (37-89)||(4795730-4795782)
chr2 (45-77)||(19614981-19615013)
chr2 (45-89)||(45235932-45235976)
[»] scaffold0187 (4 HSPs)
scaffold0187 (37-111)||(10154-10228)
scaffold0187 (37-111)||(20482-20556)
scaffold0187 (47-109)||(8902-8964)
scaffold0187 (47-109)||(19230-19292)
[»] scaffold0258 (2 HSPs)
scaffold0258 (37-109)||(13129-13201)
scaffold0258 (69-109)||(17507-17547)
[»] scaffold0024 (1 HSPs)
scaffold0024 (38-109)||(83832-83903)
[»] scaffold0005 (1 HSPs)
scaffold0005 (45-108)||(226520-226583)
[»] scaffold0057 (3 HSPs)
scaffold0057 (47-109)||(24883-24945)
scaffold0057 (38-103)||(46794-46859)
scaffold0057 (44-103)||(46996-47054)
[»] scaffold1176 (1 HSPs)
scaffold1176 (38-104)||(1692-1758)
[»] scaffold0049 (1 HSPs)
scaffold0049 (37-107)||(58936-59006)
[»] scaffold0223 (1 HSPs)
scaffold0223 (37-105)||(11093-11160)
[»] scaffold0311 (1 HSPs)
scaffold0311 (38-103)||(10773-10838)
[»] scaffold0254 (1 HSPs)
scaffold0254 (38-107)||(4117-4185)
[»] scaffold0194 (1 HSPs)
scaffold0194 (37-109)||(24621-24693)
[»] scaffold0116 (1 HSPs)
scaffold0116 (38-92)||(8865-8919)
[»] scaffold0036 (1 HSPs)
scaffold0036 (37-106)||(35124-35194)
[»] scaffold0031 (1 HSPs)
scaffold0031 (45-108)||(43085-43150)
[»] scaffold0018 (1 HSPs)
scaffold0018 (71-104)||(73001-73034)


Alignment Details
Target: chr6 (Bit Score: 129; Significance: 6e-67; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 3815182 - 3815330
Alignment:
Q  36 tctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctcctcttgttagttatggaacaatgt 135  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3815182 tctgtttccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaaggttacccccctcttgttagttatggaacaatgt 3815281  T
Q  136 tttacaaaccgaagtgaaccagacagttcaaccaagttgaaccttgaac 184  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3815282 tttaaaaaccgaagtgaaccagacagttcaaccaagttgaaccttgaac 3815330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 1346993 - 1346921
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1346993 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 1346921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 1354861 - 1354933
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1354861 ctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 1354933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 9161152 - 9161080
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  9161152 ctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccgattgcgtcaaggttaccc 9161080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 8409270 - 8409200
Alignment:
Q  39 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||| ||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8409270 gtttccaggacttgaatccgtgacctttcagtcacattacaacaactttaccagttgcgccaaggttaccc 8409200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 12222023 - 12222088
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 102  Q
    |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12222023 ctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 12222088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 20400685 - 20400625
Alignment:
Q  48 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  20400685 acttgaacctgtgacctttcagtcacatgacaacaactataccaattgcgccaaggttacc 20400625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 33922942 - 33923006
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  33922942 aggacttgaacctgtgacttttcagtcaaatgacaacaactttaccggttgcgccaaggttaccc 33923006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 13905087 - 13905152
Alignment:
Q  39 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtt 105  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13905087 gttttcaggacttgagcccgtgacctttcagtcacatgacaacaactttacc-gttgcgccaaggtt 13905152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 14975186 - 14975255
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 106  Q
    |||||| ||||||||||| | |||||||| |||||||||||||||||||||||| |||||||||||||||    
T  14975186 ctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttaccggttgcgccaaggtta 14975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 29355963 - 29356036
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa-ctttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||||    
T  29355963 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaatttttaccagttgtgccaaggttaccc 29356036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 24734654 - 24734591
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 108  Q
    |||| |||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24734654 aggatttgaacttttgacctttcagtcacatgacaacaactttaccagttgcgccaatgttacc 24734591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 12063488 - 12063422
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 111  Q
    |||||||||||| |||||||||||||| ||||| |||||||||| ||||||| ||||||||||||||    
T  12063488 aggacttgaacccgtgacctttcagtctcatgataacaactttatcagttgcaccaaggttaccctc 12063422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 2166519 - 2166587
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 107  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  2166519 tgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcg-caaggttac 2166587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 2178152 - 2178220
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 107  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  2178152 tgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcg-caaggttac 2178220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 14553533 - 14553477
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  14553533 caggacttgaacctgtgaccttt-agtcacatgacaacaactttaccagttgcaccaa 14553477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 15866143 - 15866215
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||| |||||||  |||||||||| ||||||| |||||||||||||||||| |||||||||||||    
T  15866143 ctgtttccaggaattgaacccatgacctttcaatcacatgccaacaactttaccagttgggccaaggttaccc 15866215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 32728273 - 32728336
Alignment:
Q  48 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 111  Q
    ||||||| ||||||||||||||||||||||||||||||||||  ||| | ||||||||||||||    
T  32728273 acttgaatctgtgacctttcagtcacatgacaacaactttactcgttccaccaaggttaccctc 32728336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 12889455 - 12889390
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||||||| |||||||||||||||||||||| |||| |||||||||||||||| |||| |||||||    
T  12889455 ctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttacc-gttgtgccaagg 12889390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 1941861 - 1941812
Alignment:
Q  60 gacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  1941861 gaccttccagtcagatgacaacaactttaccagttgcaccaaggttaccc 1941812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 2755531 - 2755583
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    ||||| || |||||||||||  |||||||||||||||||||||||||||||||    
T  2755531 tgtttgcaagacttgaacctacgacctttcagtcacatgacaacaactttacc 2755583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 19649294 - 19649338
Alignment:
Q  58 gtgacctttcagtcacatgacaacaactttaccagttgcgccaag 102  Q
    |||| |||||||||||||||||||||||||| |||||||||||||    
T  19649294 gtgatctttcagtcacatgacaacaactttatcagttgcgccaag 19649338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 8417501 - 8417442
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 96  Q
    |||||| || ||| |||||  ||||| |||||||||||||||||||||||||||||||||    
T  8417501 ctgtttccatgacctgaactcgtgacatttcagtcacatgacaacaactttaccagttgc 8417442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 22967199 - 22967128
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| || |||||||||  |||||||| |||||||||||||| ||||||| ||| ||||| ||||||||||    
T  22967199 tgtttccatgacttgaactagtgaccttacagtcacatgacaataactttatcagatgcgcgaaggttaccc 22967128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 109
Target Start/End: Original strand, 23821194 - 23821265
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| || |||||||||  |||||||| |||||||||||||| ||||||| ||| ||||| ||||||||||    
T  23821194 tgtttccatgacttgaactagtgaccttacagtcacatgacaataactttatcagatgcgcgaaggttaccc 23821265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 6024254 - 6024202
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 97  Q
    |||| ||||| | |||||||| || ||||||||||||||||||||||||||||    
T  6024254 aggatttgaaaccgtgaccttccaatcacatgacaacaactttaccagttgcg 6024202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 17432368 - 17432332
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcaca 74  Q
    ||||| |||||||||||||||||||||||||||||||    
T  17432368 tgtttccaggacttgaacctgtgacctttcagtcaca 17432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 23240928 - 23240971
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaa 80  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||    
T  23240928 ctgtttccaggacttgcacctgtgacctttcagtcacgtgacaa 23240971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 23930253 - 23930303
Alignment:
Q  58 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 108  Q
    ||||||||| || |||||||||||| |||||  ||||||||||||||||||    
T  23930253 gtgacctttgagacacatgacaacatctttatgagttgcgccaaggttacc 23930303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 7947479 - 7947543
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||| ||||| ||||||| ||||||||||||||||   ||| |||||||||| ||||||||||||    
T  7947479 tgtttccaggagttgaaccggtgacctttcagtcacgcaacaccaactttacc-gttgcgccaagg 7947543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 24097602 - 24097545
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 102  Q
    ||||||| |||  ||||||||||||| |||||||| ||| ||||||||||| ||||||    
T  24097602 aggacttaaactcgtgacctttcagtaacatgacatcaattttaccagttgtgccaag 24097545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 27855544 - 27855601
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagtt 94  Q
    |||||||| |||||| |||  | ||| ||||||||||||||||| |||||||||||||    
T  27855544 ctgttttcgggacttaaactcgcgacatttcagtcacatgacaaaaactttaccagtt 27855601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 32068115 - 32068074
Alignment:
Q  47 gacttgaacctgtgacctttcagtcacatgacaacaacttta 88  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||    
T  32068115 gacttgaacatgtgacctttcggtcacgtgacaacaacttta 32068074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 32758290 - 32758218
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32758290 ctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 32758218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 47077959 - 47078031
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47077959 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 47078031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 21172113 - 21172185
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21172113 ctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttaccc 21172185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 42495941 - 42496013
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42495941 ctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttaccc 42496013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 48735235 - 48735299
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48735235 aggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 48735299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 11617695 - 11617762
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtt 105  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11617695 tgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccgaggtt 11617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 2541125 - 2541198
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttc-agtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2541125 ctgtttccaggacttgaacccgtgacctttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 2541198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 10693177 - 10693245
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtt 105  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  10693177 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggtt 10693245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 42798698 - 42798626
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| || |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42798698 ctgtttccaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 42798626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 42805553 - 42805481
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  42805553 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttaccc 42805481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 43557501 - 43557429
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43557501 ctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcggcaaggttaccc 43557429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 14732928 - 14732999
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 108  Q
    |||||| |||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14732928 ctgtttccaggacttgaacccatgacttttcagtcacatgacaacaactttaccagttgcgccaaggttacc 14732999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 46354222 - 46354151
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| ||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  46354222 tgtttccaggacttgaacccgtgaccttccaatcacatgacaacaactttaccagttgcgccaaggttaccc 46354151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 35334920 - 35334989
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 106  Q
    |||||| ||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35334920 ctgtttccaggacttgaactcgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 35334989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 7193106 - 7193042
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  7193106 aggacttgaacccgtgacctttcagtcacatgacaacaactttacaagttacgccaaggttaccc 7193042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 18327063 - 18326991
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| | ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  18327063 ctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgccaaggttaccc 18326991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 19426995 - 19427059
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 101  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  19426995 ctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaa 19427059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 34626313 - 34626385
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  34626313 ctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaactttaccagttgcgctaaggttaccc 34626385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 27629663 - 27629596
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggt 104  Q
    |||||| ||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||    
T  27629663 ctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttaccagttgcgccaaggt 27629596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 29140467 - 29140542
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctcct 113  Q
    ||||||||  |||||||  |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  29140467 tgttttcaaaacttgaatgtgtgacctttcagttacatgacaacaactttaccagttgcgccaagattaccctcct 29140542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 7794612 - 7794682
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 107  Q
    |||||| ||||||||||||| |||||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  7794612 ctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttaccagttgcgctaaggttac 7794682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 22699083 - 22699148
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22699083 caggacttgaacccataacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 22699148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 5180263 - 5180335
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||| | |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5180263 ctgtttccagaagttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 5180335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 47716488 - 47716416
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||| |||||||||| |||||||||| ||||||| |||||||||||||    
T  47716488 ctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttttccagttgtgccaaggttaccc 47716416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 40463896 - 40463837
Alignment:
Q  47 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 106  Q
    |||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||    
T  40463896 gacttgaacccgtgaccttacagtcacatgacaacaactttaccggttgcgccaaggtta 40463837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 8149054 - 8149124
Alignment:
Q  39 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||||||||  ||||| || |||||||||||||||||| |||||||||| |||||||||||||    
T  8149054 gttttcaggacttgaactcgtgactttgcagtcacatgacaacaacattaccagttgtgccaaggttaccc 8149124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 28362259 - 28362316
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  28362259 aggacttgaacctgtgacctttcagccacatgacaacaactttacc-gttgcgccaagg 28362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 28078245 - 28078309
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||| |||||||| |||||||||||||||||||| || |||||||||| ||||||||    
T  28078245 aggacttgaacccgtgaccttacagtcacatgacaacaacttcacgagttgcgccagggttaccc 28078309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 42476902 - 42476830
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||| ||||||| | ||||||||| ||||||||||||||||||||||||||| |||||| |||||||    
T  42476902 ctgtttccagaacttgaatccgtgaccttttagtcacatgacaacaactttaccagttacgccaatgttaccc 42476830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 12473332 - 12473261
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| |||||||||||||  |||||||||||  ||||||||||||||||||| |||||||||||| |||||    
T  12473332 tgtttgcaggacttgaacccatgacctttcagatacatgacaacaactttaccggttgcgccaaggctaccc 12473261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 13805124 - 13805066
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||    
T  13805124 caggacttgaacccgttacctttcagtcacatgacaacaactttacca-ttgcgccaagg 13805066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 3469293 - 3469350
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3469293 aggacttgagtctgtgacctttcagtcacatgacaacaactttacc-gttgcgccaagg 3469350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 11741824 - 11741774
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 87  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  11741824 ctgttttcaggacttgaacccatgacctttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 23419780 - 23419845
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| ||| ||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||    
T  23419780 ctgtttccagaacttgaacctgtgaccttttagtcacatgacagcaactttacc-gttgcgccaagg 23419845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 33872016 - 33872070
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccag 92  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  33872016 tgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccag 33872070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 1424016 - 1424085
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 106  Q
    |||||| ||||| ||||| | |||||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  1424016 ctgtttccaggatttgaatccgtgaccttccagtcacataacaacaactttaccagttgcgccaaagtta 1424085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 2663039 - 2663109
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| |||||||||||||| ||||  | ||||||||| ||||||||||||| |||||||||||||||||||    
T  2663039 ctgtttccaggacttgaacctatgac--tccagtcacataacaacaactttactagttgcgccaaggttaccc 2663109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 21447619 - 21447547
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||||||| |||||||| | |||||||| || | |||||||||||| |||| ||||||||||||||||||||    
T  21447619 ctgttttcaagacttgaatccgtgaccttccaattacatgacaacaaatttatcagttgcgccaaggttaccc 21447547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 6736918 - 6736867
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 89  Q
    |||||| |||||||||||| |||||||||||||| |||||||||||||||||    
T  6736918 tgttttgaggacttgaacccgtgacctttcagtcgcatgacaacaactttac 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 19266476 - 19266414
Alignment:
Q  40 ttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||| ||||| ||||||    
T  19266476 ttttcaggacttgaacccacgacctttcagtcacatgacaacaactttacc-gttgcaccaagg 19266414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 42391204 - 42391251
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaac 84  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  42391204 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 19265834 - 19265781
Alignment:
Q  47 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 101  Q
    |||||||||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  19265834 gacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaa 19265781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 25198725 - 25198679
Alignment:
Q  63 ctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  25198725 ctttcagtcatatgacaacaactttaccagttacgccaaggttaccc 25198679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 48123590 - 48123655
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| |||||||||||||  ||||||||||| ||||||| |||||||||||| ||||||||||||    
T  48123590 ctgtttccaggacttgaacccatgacctttcagacacatgataacaactttacc-gttgcgccaagg 48123655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 39123911 - 39123857
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcca 100  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||| ||||||||    
T  39123911 aggacttgaacccgtgtcgtttcagtcacatgacaacaactttacca-ttgcgcca 39123857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 7644985 - 7644931
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 91  Q
    |||||| ||||||||||||| |||||||||||||||| | ||||||| |||||||    
T  7644985 ctgtttccaggacttgaacccgtgacctttcagtcacgttacaacaaatttacca 7644931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 14099119 - 14099165
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||    
T  14099119 caggacttcaacccatgacctttcagtcacatgacaacaactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 14409136 - 14409182
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||    
T  14409136 caggacttcaacccatgacctttcagtcacatgacaacaactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 42101991 - 42102056
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| |||||||||||| | ||||||| ||||||| |||||||||||||||| |||| |||||||    
T  42101991 ctgtttccaggacttgaacttttgaccttccagtcacgtgacaacaactttacc-gttgtgccaagg 42102056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 29907440 - 29907393
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatg--acaacaactttacc 90  Q
    |||||||||||| |||||||||||||||||||  ||||||||||||||    
T  29907440 aggacttgaacccgtgacctttcagtcacatgatacaacaactttacc 29907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 45019007 - 45019054
Alignment:
Q  62 cctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||| |||||||||||||  | ||||||||||||||||||||||||||    
T  45019007 ccttccagtcacatgacaggacctttaccagttgcgccaaggttaccc 45019054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 28685261 - 28685299
Alignment:
Q  58 gtgacctttcagtcacatgacaacaactttaccagttgc 96  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  28685261 gtgatctttcagtcacatgacaacaactttaacagttgc 28685299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 44123727 - 44123792
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| ||| ||||||||| || | ||||||||||||||||| |||||||||| ||||| ||||||    
T  44123727 ctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttacc-gttgcaccaagg 44123792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 5814489 - 5814433
Alignment:
Q  48 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggt 104  Q
    ||||||||| ||||| || || |||||| ||||||||||||||  ||||||||||||    
T  5814489 acttgaacccgtgactttccaatcacataacaacaactttaccgattgcgccaaggt 5814433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 4e-31; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 45812641 - 45812713
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45812641 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttaccc 45812713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 18944695 - 18944623
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18944695 ctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 18944623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 34725202 - 34725274
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34725202 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 34725274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 22930173 - 22930245
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22930173 ctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 22930245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 32632662 - 32632734
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32632662 ctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttaccc 32632734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 47214563 - 47214491
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47214563 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttaccc 47214491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 14617090 - 14617018
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14617090 ctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttaccc 14617018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 20004198 - 20004270
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  20004198 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 20004270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 27474333 - 27474261
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  27474333 ctgtttccaagacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgagctaaggttaccc 27474261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 34714675 - 34714603
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| || |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34714675 ctgtttccatgacttgaacccgtgacctttcaatcacatgacaacaactttaccagttgcgccaaggttaccc 34714603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 40424786 - 40424722
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40424786 aggacttgaacccgtggcctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 40424722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 41319912 - 41319984
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  41319912 ctgtttccaggacttaaacctgtgacctttcagtcacatgacaacaactttaccagttgtgtcaaggttaccc 41319984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 46991855 - 46991784
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  46991855 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 46991784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 23768426 - 23768500
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 111  Q
    |||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||    
T  23768426 ctgtttccatgacttgaacctgtgaccttacagtcacatgacaacaactttaccagttgcgtcgaggttaccctc 23768500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 8197088 - 8197023
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  8197088 caggacttgaacccgtgacctttcagtcacatgacaacaacttgaccagttgcaccaaggttaccc 8197023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 30395834 - 30395903
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 106  Q
    |||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||    
T  30395834 ctgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttaccagttgcgccaaggtta 30395903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 25290214 - 25290142
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccct 110  Q
    ||||| || |||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25290214 tgtttccaagacttgaacacgtgacctttcagtcacatgacaacaactttacctgttgcgccaaggttaccct 25290142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 38478394 - 38478458
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  38478394 aggacttgaacccgtgacctttcagtcacatgacaacaagtttactagttgcgccaaggttaccc 38478458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 46248059 - 46248131
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| || |||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  46248059 ctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgagccaaggttaccc 46248131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 6983915 - 6983980
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  6983915 ctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttacca-ttgcgccaagg 6983980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 10668277 - 10668200
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacat-----gacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||     ||||||||||||||||||||||||||||||||||    
T  10668277 ctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttaccagttgcgccaaggttaccc 10668200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 18724651 - 18724715
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 102  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  18724651 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc-gttgcgccaag 18724715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 18742080 - 18742137
Alignment:
Q  50 ttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 107  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18742080 ttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 18742137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 19932869 - 19932930
Alignment:
Q  48 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19932869 acttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggtaaccc 19932930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 20036271 - 20036208
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 102  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  20036271 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca-ttgcgccaag 20036208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 27201699 - 27201627
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||||| || ||| ||||||||||    
T  27201699 ctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccatttacgctaaggttaccc 27201627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 19414483 - 19414420
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 108  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||| || |||||||||||||    
T  19414483 aggacttgaacccgtgacctttcagtcatatgacaacaactttaccaattacgccaaggttacc 19414420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 2435893 - 2435958
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  2435893 ctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 2435958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 45402146 - 45402077
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 107  Q
    |||||| ||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||    
T  45402146 ctgtttccaggacttgaacccgttaccttcca-tcacatgacaacaactttaccagttgcgccaaggttac 45402077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 4430132 - 4430197
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 102  Q
    ||||||||| ||||| |||| |||||||| |||||||||||||||||||||||||| |||||||||    
T  4430132 ctgttttcaagacttaaacccgtgaccttccagtcacatgacaacaactttaccagctgcgccaag 4430197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 9939512 - 9939443
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaac-tttaccagttgcgccaaggtta 106  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  9939512 tgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttttaccggttgcgccaaggtta 9939443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 18335394 - 18335465
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 108  Q
    |||||| |||||||| ||| ||||||||||||| |||||||||| ||||||| || ||||||||||||||||    
T  18335394 ctgtttccaggactttaacttgtgacctttcagacacatgacaaaaactttatcacttgcgccaaggttacc 18335465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 50760332 - 50760397
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| ||||||||  |||||||||||    
T  50760332 ctgttttcaggacttgaacccgtgacctctcagtcacatgacaactactttacc-tttgcgccaagg 50760397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 52910269 - 52910204
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| || || ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  52910269 ctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaactttacc-gttgcaccaagg 52910204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 2436000 - 2436064
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||||||||||| ||||| ||||||    
T  2436000 tgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcaccaagg 2436064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 6925145 - 6925096
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagt 93  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  6925145 caggacttgaacccgtgaccttccagtcacatgacaacaactttaccagt 6925096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 12126941 - 12127010
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 106  Q
    |||||| ||| |||| |||| ||||||||||| | |||||||||||||||||| ||||||||||||||||    
T  12126941 ctgtttccagaacttaaacccgtgacctttcaattacatgacaacaactttacgagttgcgccaaggtta 12127010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 18335955 - 18336024
Alignment:
Q  40 ttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||||| |||||||| ||||||||||||| |||||| ||||||||||| || |||||||||| ||||||    
T  18335955 ttttcagaacttgaacatgtgacctttcagacacatggcaacaactttatcacttgcgccaagattaccc 18336024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 22327150 - 22327086
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||||||| || ||||||||||||    
T  22327150 tgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttgcc-gttgcgccaagg 22327086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 33223036 - 33222971
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 102  Q
    |||||| || ||||| || | ||||||||||||||||||||||||||||||||| |||||||||||    
T  33223036 ctgtttccatgacttaaatccgtgacctttcagtcacatgacaacaactttaccggttgcgccaag 33222971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 35019281 - 35019217
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||| ||||||||||| |||||||||||||||||  |||||||||||||||| ||||||||||||    
T  35019281 tgtttacaggacttgaatctgtgacctttcagtcatgtgacaacaactttacc-gttgcgccaagg 35019217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 21006185 - 21006125
Alignment:
Q  48 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 108  Q
    |||||||||| ||||||||||||| ||||||||||| |||||| |||||| ||||||||||    
T  21006185 acttgaacctttgacctttcagtcgcatgacaacaattttaccggttgcgtcaaggttacc 21006125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 14988025 - 14988084
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 96  Q
    ||||||||||||||||||| |||||| ||  ||||| |||||||||||||||||||||||    
T  14988025 ctgttttcaggacttgaacttgtgactttctagtcatatgacaacaactttaccagttgc 14988084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 35117881 - 35117927
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  35117881 caggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 22151556 - 22151495
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgc 98  Q
    |||||| ||| |||||||||| ||||||| |||||| ||||||||||||||| |||||||||    
T  22151556 ctgtttccagaacttgaacctatgaccttacagtcagatgacaacaactttatcagttgcgc 22151495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 21723715 - 21723644
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||| |||| ||| ||| | ||||||||||||||||||||||||||||| || ||||||||||    
T  21723715 ctgtttccaggact-gaacttgtaaccatccagtcacatgacaacaactttaccagttgtgcgaaggttaccc 21723644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 10163810 - 10163739
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||||||| |||| ||| ||| || ||| || |||||||||||||||||| |||||||||||| |||||||    
T  10163810 tgttttcagaacttaaacttgtaacattttagccacatgacaacaactttatcagttgcgccaatgttaccc 10163739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 10378838 - 10378896
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||||||||||| || ||||||||||||| |||||||||||||||| ||||| ||||||    
T  10378838 caggacttgaacccgtaacctttcagtcacgtgacaacaactttacc-gttgcaccaagg 10378896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 24564395 - 24564324
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| || |||||||| ||| ||||||||| ||||| |||| |||||||||  ||||||||||||||||||    
T  24564395 tgtttccaagacttgaatctgcgacctttcaatcacaagacatcaactttactggttgcgccaaggttaccc 24564324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 25468370 - 25468421
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 89  Q
    ||||| |||||||||||||  |||||||||| ||||||||||||||||||||    
T  25468370 tgtttccaggacttgaacccatgacctttcaatcacatgacaacaactttac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 49546014 - 49546076
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 101  Q
    |||||| || |||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||    
T  49546014 tgttttaagaacttgaacctgtaacctttcagccacgtgacaacaactttacc-gttgcgccaa 49546076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 19701622 - 19701557
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||||||| ||||| |||| ||||| ||||||||||| ||||||||||||| | ||||||||||||    
T  19701622 ctgttttcatgacttaaacccgtgacatttcagtcacacgacaacaacttta-ctgttgcgccaagg 19701557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 50811991 - 50811926
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| |||||| |||  | |||||||||||||||| |||||||||||||||| ||||||||||||    
T  50811991 ctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 50811926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 11596557 - 11596501
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 102  Q
    |||||||||||| ||||| |||||||||||||||| | |||||||| |||||||||||    
T  11596557 aggacttgaacccgtgacatttcagtcacatgacagccactttacc-gttgcgccaag 11596501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 31272481 - 31272522
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgaca 79  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  31272481 tgtttccaggacttgaacctgtgacctttcagtcacgtgaca 31272522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 44485216 - 44485280
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||| |||||||  |||| ||||||||||| ||||||||||||||||||| | ||||||||||||    
T  44485216 tgtttccaggactataacccgtgacctttcaatcacatgacaacaacttta-ctgttgcgccaagg 44485280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 15511259 - 15511322
Alignment:
Q  39 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||| |||||||| ||  ||||||||||||| ||||| ||||||||||||||| |||||||||||    
T  15511259 gtttccaggacttcaatatgtgacctttcagccacattacaacaactttacca-ttgcgccaagg 15511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 28894658 - 28894704
Alignment:
Q  58 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtt 105  Q
    ||||| ||||||||||||||||||||||||| | ||||||||||||||    
T  28894658 gtgacttttcagtcacatgacaacaacttta-ctgttgcgccaaggtt 28894704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 17470460 - 17470517
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||||||||||  ||||| ||||||||| |||||||||||||||| ||||| ||||||    
T  17470460 aggacttgaacccatgaccattcagtcacgtgacaacaactttacc-gttgcaccaagg 17470517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 43768210 - 43768168
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgaca 79  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||    
T  43768210 ctgtttccaggacttgaacccgtgacctttcagtgacatgaca 43768168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 6358173 - 6358121
Alignment:
Q  50 ttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||||||||||||||||||||  ||| ||||| |||||| ||||||||||||    
T  6358173 ttgaacctgtgacctttcagtcatgtgaaaacaaatttacc-gttgcgccaagg 6358121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 25554829 - 25554893
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||| |||||||| |||  ||| ||||| |||||| ||||||||||||||||| |||||||||||    
T  25554829 tgtttccaggacttaaacacgtggccttttagtcacgtgacaacaactttacca-ttgcgccaagg 25554893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 4212208 - 4212268
Alignment:
Q  48 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 108  Q
    |||||||  |||||||||||||||| |||| |||||||||||  || ||| ||||||||||    
T  4212208 acttgaatatgtgacctttcagtcatatgataacaactttactcgtcgcgtcaaggttacc 4212268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 35005175 - 35005139
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcac 73  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  35005175 ctgttttcaagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 6e-30; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 43334231 - 43334157
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 111  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43334231 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 43334157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 38879610 - 38879538
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38879610 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 38879538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 27328781 - 27328708
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccct 110  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  27328781 ctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccaattgcgtcaaggttaccct 27328708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 24448919 - 24448847
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24448919 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 24448847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 35710342 - 35710270
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35710342 ctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttaccc 35710270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 37024660 - 37024732
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37024660 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttaccc 37024732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 41014348 - 41014276
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41014348 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 41014276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 1565459 - 1565388
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1565459 tgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 1565388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 4619219 - 4619285
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccct 110  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4619219 caggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccct 4619285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 8170088 - 8170157
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 106  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8170088 ctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaaggtta 8170157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 23974808 - 23974738
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| ||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  23974808 tgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc-gttgcgccaaggttaccc 23974738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 22861780 - 22861845
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccct 110  Q
    |||||||||| | ||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  22861780 aggacttgaatccgtgacctttcagtcacatgacaacaactttatcagttgtgccaaggttaccct 22861845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 22187314 - 22187242
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| |||||||| |||| ||||||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  22187314 ctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttactagttgcgccaaagttaccc 22187242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 30006353 - 30006280
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 111  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||| |||| |||||||||||| |||| ||||    
T  30006353 tgttttccggacttgaatctatgacctttcagtcacatgacaacaaatttatcagttgcgccaatgttaacctc 30006280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 22600482 - 22600411
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| ||||||||||||| || ||||| ||||||||||| |||||||||||||||| || |||||||||||    
T  22600482 tgtttccaggacttgaacccgtaaccttccagtcacatgataacaactttaccagttacgtcaaggttaccc 22600411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 31299653 - 31299591
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 107  Q
    |||||||||||  ||||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  31299653 aggacttgaactagtgacctgtaagtcacatgacaacaactttaccagttgcaccaaggttac 31299591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 2838787 - 2838735
Alignment:
Q  58 gtgaccttt-cagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  2838787 gtgacctttacagtcacatgacaacaactttaccggttgcgccaaggttaccc 2838735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 39079882 - 39079937
Alignment:
Q  47 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||    
T  39079882 gacttgaacccgtgacctttctgtcacatgacaacaactttacc-gttgcgccaagg 39079937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 39301142 - 39301087
Alignment:
Q  47 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  39301142 gacttgaacccgtgacctttcagtaacatgacaacaactttacc-gttgcgccaagg 39301087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 209040 - 209098
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| | ||||||||||    
T  209040 caggacttgaacttgtgaccttttagtcacatgacaacaactttacc-gctgcgccaagg 209098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 19438757 - 19438706
Alignment:
Q  58 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||| |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  19438757 gtgatcttttagtcatatgacaacaactttaccagttgcgccaaggttaccc 19438706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 17419943 - 17419870
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccct 110  Q
    |||||| ||||||||||||  || ||||||||||||||| ||||||| |||||||||| ||||||  |||||||    
T  17419943 ctgtttccaggacttgaactcgtaacctttcagtcacattacaacaattttaccagttacgccaaaattaccct 17419870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 12006457 - 12006509
Alignment:
Q  58 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccct 110  Q
    ||||||||||||||||||||||||||||| | |||||||||||| | ||||||    
T  12006457 gtgacctttcagtcacatgacaacaacttgagcagttgcgccaaagctaccct 12006509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 10634260 - 10634317
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||||||||||  ||||||||||||||| |||||||||||| ||| ||||||||||||    
T  10634260 aggacttgaacccatgacctttcagtcacttgacaacaacttcacc-gttgcgccaagg 10634317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 32703453 - 32703411
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgaca 79  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  32703453 ctgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 19143049 - 19143113
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||| ||||||||||||||||| | ||| |||||| ||||||||| ||||||| |||||||||||    
T  19143049 tgtttccaggacttgaacctgtggcattttagtcacgtgacaacaattttacca-ttgcgccaagg 19143113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 31694217 - 31694266
Alignment:
Q  40 ttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 89  Q
    |||||| ||||||||||| |||||| |||||||| |||||||||||||||    
T  31694217 ttttcaagacttgaacctatgacctatcagtcacgtgacaacaactttac 31694266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 1850660 - 1850624
Alignment:
Q  46 ggacttgaacctgtgacctttcagtcacatgacaaca 82  Q
    ||||||||||| |||||||||||||||||||||||||    
T  1850660 ggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 28516541 - 28516593
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    ||||| || |||||||||| |||||||||||| ||| ||||||||||||||||    
T  28516541 tgtttccaagacttgaacccgtgacctttcagccacctgacaacaactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 41956924 - 41956889
Alignment:
Q  74 atgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||||||||||||||||||| |||||||    
T  41956924 atgacaacaactttaccagttgcgccaatgttaccc 41956889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 43574605 - 43574555
Alignment:
Q  58 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||||||| |||||||||||||| || ||||||||||| |||||    
T  43574605 gtgacctttcagtcacgtgacaacaactttatca-ttgcgccaaggctaccc 43574555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 9794465 - 9794511
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 83  Q
    |||||||||||||||||||| |||||||||   ||||||||||||||    
T  9794465 ctgttttcaggacttgaacccgtgaccttttgatcacatgacaacaa 9794511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 1405215 - 1405170
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 83  Q
    ||||| ||||||||||||| ||||||||  ||||||||||||||||    
T  1405215 tgtttccaggacttgaacccgtgaccttctagtcacatgacaacaa 1405170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 88
Target Start/End: Original strand, 28208235 - 28208264
Alignment:
Q  59 tgacctttcagtcacatgacaacaacttta 88  Q
    ||||||||||||||||||||||||||||||    
T  28208235 tgacctttcagtcacatgacaacaacttta 28208264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 31362454 - 31362495
Alignment:
Q  50 ttgaacctgtgacctttcagtcacatgacaacaactttacca 91  Q
    ||||||| |||||||| || ||||||||||||||||||||||    
T  31362454 ttgaacccgtgaccttccaatcacatgacaacaactttacca 31362495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 34074676 - 34074717
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactt 86  Q
    ||||||||||| ||||||||||||||||  ||||||||||||    
T  34074676 aggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 3771370 - 3771318
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 89  Q
    |||||| || ||||| ||||||||||||||||||||| ||| |||||| ||||    
T  3771370 ctgtttacatgacttaaacctgtgacctttcagtcacgtgagaacaacattac 3771318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 42924941 - 42924977
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcaca 74  Q
    ||||||||||||||||||  |||||||||||||||||    
T  42924941 tgttttcaggacttgaactcgtgacctttcagtcaca 42924977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 30608 - 30536
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30608 ctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 30536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 9e-29; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 12670354 - 12670426
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12670354 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 12670426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 30454201 - 30454273
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30454201 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 30454273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 20869602 - 20869671
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 106  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20869602 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 20869671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 39461102 - 39461174
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39461102 ctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccagttgcgccaaggttaccc 39461174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 24245478 - 24245408
Alignment:
Q  39 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24245478 gtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgccccaaggttaccc 24245408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 2626548 - 2626476
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  2626548 ctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccaattgcgccaaggttaccc 2626476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 17823605 - 17823533
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  17823605 ctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaagattaccc 17823533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 28817732 - 28817804
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  28817732 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 28817804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 35261708 - 35261636
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| |||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35261708 ctgtttccagggcttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 35261636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 36720825 - 36720753
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  36720825 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttaccc 36720753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 109
Target Start/End: Original strand, 7136636 - 7136707
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7136636 tgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 7136707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 20284179 - 20284250
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 108  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  20284179 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggttacc 20284250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 21070808 - 21070879
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 108  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  21070808 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggttacc 21070879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 25250551 - 25250480
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 108  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  25250551 ctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaactttaccagttgtgccaaggttacc 25250480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 28407445 - 28407379
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  28407445 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaagg 28407379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 13160723 - 13160659
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  13160723 aggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccgaggttaccc 13160659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 18164865 - 18164937
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  18164865 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccggttgcgccaagattaccc 18164937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 29521791 - 29521863
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  29521791 ctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaactttatcagttgcgccaaggttaccc 29521863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 44530177 - 44530106
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| || |||||||||| ||||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  44530177 tgtttccaagacttgaacccgtgaccttctagtcacatgacagcaactttaccagttgcgccaaggttaccc 44530106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 6760851 - 6760786
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 102  Q
    |||||| ||||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||||    
T  6760851 ctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttaccagttgcgccaag 6760786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 45071294 - 45071222
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||| ||||||||| |||||||| || ||||||||||||||||||||||||  ||||||||||||||    
T  45071294 ctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaactttaccagtatcgccaaggttaccc 45071222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 31454216 - 31454145
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||| ||||| ||||||||||||  ||||||||||||||| |||| ||||||||||| ||||||    
T  31454216 tgttttcaggacatgaacatgtgacctttcaaccacatgacaacaactataccggttgcgccaagattaccc 31454145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 42083805 - 42083870
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||||| |||||| ||||||||||||    
T  42083805 ctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaattttacc-gttgcgccaagg 42083870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 8897871 - 8897940
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 107  Q
    ||||| |||||||| |||| |||||||| | ||||||||||||||||||||||||||| |||| ||||||    
T  8897871 tgtttccaggacttcaacccgtgaccttgctgtcacatgacaacaactttaccagttgtgccagggttac 8897940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 44781613 - 44781677
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||| ||||||||||||| |||| ||||||||||| |||||||||||||||| ||||||||||||    
T  44781613 tgtttccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc-gttgcgccaagg 44781677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 11748328 - 11748256
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| || |||||||||| ||||| |||||||||||||||||||| || ||||||||| |||| |||||||    
T  11748328 ctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaatttcaccagttgcaccaaagttaccc 11748256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 26954161 - 26954089
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||  | |||||||||||||||||||||| || |||||| |||||||    
T  26954161 ctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttaccaattacgccaaagttaccc 26954089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 23286431 - 23286471
Alignment:
Q  69 gtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  23286431 gtcacatgacaacaactttaccagttgcgacaaggttaccc 23286471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 109
Target Start/End: Original strand, 40605044 - 40605083
Alignment:
Q  70 tcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  40605044 tcacatgacaacaactttaccagttgcgccaaagttaccc 40605083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 30962879 - 30962944
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| |||||||||||   ||||||||||| |||||||||||||||||| || ||||||||||||    
T  30962879 ctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttttcc-gttgcgccaagg 30962944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 84
Target Start/End: Complemental strand, 31457201 - 31457155
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaac 84  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||||    
T  31457201 tgtttacaggacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 35105951 - 35105902
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttt 87  Q
    ||||| ||||||||||||| |||||||||||| ||| |||||||||||||    
T  35105951 tgtttccaggacttgaacccgtgacctttcagccacgtgacaacaacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 11001057 - 11001109
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    ||||||||| | ||||||| | ||||||||| |||||||||||||||||||||    
T  11001057 tgttttcagaatttgaacccgcgacctttcaatcacatgacaacaactttacc 11001109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 22598185 - 22598133
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    ||||| ||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  22598185 tgtttccaggatttgaacccgtgacctttcagtcatgtgacaacaactttacc 22598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 12625917 - 12625858
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 97  Q
    ||||| |||||||||| || |||||||   ||||||| ||||||||||||||||||||||    
T  12625917 tgtttccaggacttgagcccgtgacctacaagtcacacgacaacaactttaccagttgcg 12625858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 42840900 - 42840866
Alignment:
Q  75 tgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||||||||||||| |||||||||||||||||||    
T  42840900 tgacaacaactttactagttgcgccaaggttaccc 42840866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 27635058 - 27634985
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacat-gacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||| ||||||||||||  | |||||||||||  ||| |||||||| |||||    
T  27635058 ctgtttccaggacttgaacccgtgacatttcagtcacataaaaaacaactttactggttccgccaaggctaccc 27634985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 102
Target Start/End: Complemental strand, 5688829 - 5688801
Alignment:
Q  74 atgacaacaactttaccagttgcgccaag 102  Q
    |||||||||||||||||||||||||||||    
T  5688829 atgacaacaactttaccagttgcgccaag 5688801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 24365178 - 24365218
Alignment:
Q  49 cttgaacctgtgacctttcagtcacatgacaacaactttac 89  Q
    |||||||| ||||| ||| ||||||||||||||||||||||    
T  24365178 cttgaacccgtgacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 40607830 - 40607890
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 97  Q
    |||||||| ||||||||||   |||| || |||| |||||||||||||||||||| |||||    
T  40607830 ctgttttcgggacttgaactcatgacattccagttacatgacaacaactttaccaattgcg 40607890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 9e-29; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 11054252 - 11054324
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11054252 ctgttttcaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttaccc 11054324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 47528634 - 47528706
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47528634 ctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttaccc 47528706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 48598929 - 48599001
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48598929 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 48599001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 21646993 - 21646924
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 106  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21646993 ctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 21646924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 30639410 - 30639337
Alignment:
Q  36 tctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30639410 tctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaactttaccagttgcgccaaggttaccc 30639337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 5306769 - 5306841
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5306769 ctgtttccaggacttgaacccgtgacctttcagtcacatgacatcaactttaccagttgcgccaaggttaccc 5306841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 5648288 - 5648216
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5648288 ctgtttccaggacttgaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 5648216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 6430731 - 6430803
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6430731 ctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 6430803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 10660432 - 10660361
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10660432 tgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 10660361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 10874577 - 10874506
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10874577 tgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 10874506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 20225012 - 20224941
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20225012 tgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 20224941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 16911583 - 16911517
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 111  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16911583 aggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttaccctc 16911517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 23501812 - 23501750
Alignment:
Q  47 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23501812 gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 23501750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 5313100 - 5313172
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  5313100 ctgttttcaggaattgaacccgtgacctttcaatcacatgacaacaactttaccagttacgccaaggttaccc 5313172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 16408709 - 16408777
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtt 105  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  16408709 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtt 16408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 14590858 - 14590795
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 108  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14590858 aggacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 14590795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 37494879 - 37494808
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||    
T  37494879 tgtttccaggacttgaacctgtgacctttcagtcgcatggcaacaactttaccagttgcaccaaggttaccc 37494808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 13256510 - 13256575
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  13256510 caggacttgaacctatgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 13256575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 17315412 - 17315476
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17315412 aggaattgaacccgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttaccc 17315476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 44363238 - 44363294
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagt 93  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  44363238 ctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttaccagt 44363294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 30352697 - 30352767
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 107  Q
    |||||| |||||||  |||| |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  30352697 ctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttaccagttgcgccaaggttac 30352767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 54967039 - 54966983
Alignment:
Q  48 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtt 105  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  54967039 acttgaacatgtgacctttcagtcacatgacaacaactttacc-gttgcgccaaggtt 54966983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 20405101 - 20405050
Alignment:
Q  58 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  20405101 gtgaccttccagtcacatgacaacaactttaccagttgcgtcaaggttaccc 20405050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 47441645 - 47441699
Alignment:
Q  46 ggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 101  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  47441645 ggacttgaacctgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaa 47441699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 49938696 - 49938759
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcca 100  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||  | |||||||||    
T  49938696 ctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaacttttaccgttgcgcca 49938759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 18969738 - 18969696
Alignment:
Q  69 gtcacatgacaacaactttaccagttgcgccaaggttaccctc 111  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18969738 gtcacatgacaacaactttaccagttgcgccaaggttaccctc 18969696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 487242 - 487306
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||| || |||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||    
T  487242 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacc-gttacgccaagg 487306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 17043500 - 17043549
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactt 86  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  17043500 ctgtttccaggacttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 40915858 - 40915802
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagt 93  Q
    |||||| ||||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  40915858 ctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaactttaccagt 40915802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 54730270 - 54730206
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||  ||||||||| |||||||    
T  54730270 aggacttgaacccgtgaccttttggtcacatgacaacaactttaccgattgcgccaaagttaccc 54730206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 42164255 - 42164317
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 101  Q
    ||||| || |||||||||| |||||||||||||||||||||||||| |||||| ||||||||||    
T  42164255 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc-gttgcgccaa 42164317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 55766593 - 55766644
Alignment:
Q  58 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||||||||    
T  55766593 gtgaccttccggtcacatgacaacaactttaccagttgcgtcaaggttaccc 55766644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 25343205 - 25343152
Alignment:
Q  48 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 102  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||    
T  25343205 acttgaacctgtgacctatcagtcacgtgacaacaactttacca-ttgcgccaag 25343152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 32478892 - 32478942
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 88  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  32478892 tgtttccaggacttgaacctgtgacctctcggtcacatgacaacaacttta 32478942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 7038078 - 7038041
Alignment:
Q  41 tttcaggacttgaacctgtgacctttcagtcacatgac 78  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7038078 tttcaggacttgaacctgtgacctttcagtcacatgac 7038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 19027876 - 19027823
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 91  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  19027876 tgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactctacca 19027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 30496426 - 30496491
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 102  Q
    |||||| || |||||||||  |||||||||||||||| |||||||||||||  |||||||||||||    
T  30496426 ctgtttccatgacttgaacacgtgacctttcagtcacgtgacaacaacttttacagttgcgccaag 30496491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 8473726 - 8473790
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 101  Q
    |||||| ||||||||||||| |  ||||| | |||| ||||||||||||||||||||||||||||    
T  8473726 ctgtttccaggacttgaacccgcaaccttccggtcatatgacaacaactttaccagttgcgccaa 8473790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 14983853 - 14983789
Alignment:
Q  47 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 111  Q
    |||||||| | |||||||| || ||| |||||||||||||||||||||  |||||||||||||||    
T  14983853 gacttgaatccgtgaccttccaatcatatgacaacaactttaccagttctgccaaggttaccctc 14983789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 20373908 - 20373972
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||| |||||| |||||| ||||||||| |||| |||||||| |||||||||||||| |||||||    
T  20373908 aggaattgaacatgtgacatttcagtcatatgagaacaacttgaccagttgcgccaaagttaccc 20373972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 39077900 - 39077948
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaact 85  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  39077900 ctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 43035268 - 43035224
Alignment:
Q  46 ggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||    
T  43035268 ggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 49938554 - 49938610
Alignment:
Q  47 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||||| |||||||||||||||||| |||||||||||||  | ||||||||||||    
T  49938554 gacttgaatctgtgacctttcagtcacgtgacaacaacttttaccgttgcgccaagg 49938610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 9832417 - 9832468
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 88  Q
    |||||||||||||||||||| ||||||||||||||| || ||||||| ||||    
T  9832417 ctgttttcaggacttgaacccgtgacctttcagtcagatcacaacaatttta 9832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 109
Target Start/End: Original strand, 55830860 - 55830899
Alignment:
Q  70 tcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  55830860 tcacatgacaacaactttaccagttgcgtcaaggttaccc 55830899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 7385582 - 7385628
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 83  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||||    
T  7385582 ctgtttccagggcttgaacccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 25463150 - 25463108
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaa 80  Q
    ||||| ||||||||||||| |||||||||||||||||||||||    
T  25463150 tgtttccaggacttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 50856350 - 50856407
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||||||||| ||||||||||| |||  |||||||||||||||| ||||||||||||    
T  50856350 aggacttgaacccgtgacctttcaatcatgtgacaacaactttacc-gttgcgccaagg 50856407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 54640445 - 54640510
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| || |||||||||| |||||||||||| ||| ||||||||| |||||| ||||||||||||    
T  54640445 ctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttacc-gttgcgccaagg 54640510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 35567199 - 35567146
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    |||||| || ||||||||||  |||||||||||| |||||||||||||||||||    
T  35567199 ctgtttccaagacttgaacccatgacctttcagttacatgacaacaactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 41018900 - 41018945
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 83  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||||    
T  41018900 tgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 23580325 - 23580365
Alignment:
Q  48 acttgaacctgtgacctttcagtcacatgacaacaacttta 88  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  23580325 acttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 30690296 - 30690340
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaacttta 88  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||    
T  30690296 caggacttgaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 29879624 - 29879675
Alignment:
Q  58 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||||||  ||||||||||||||||||||| ||||||| |||| |||||||    
T  29879624 gtgaccttctagtcacatgacaacaactttatcagttgcaccaatgttaccc 29879675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 3580952 - 3580994
Alignment:
Q  47 gacttgaacctgtgacctttcagtcacatgacaacaactttac 89  Q
    |||||||||  ||||| ||||||||||||||||||||||||||    
T  3580952 gacttgaactcgtgacttttcagtcacatgacaacaactttac 3580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 12257707 - 12257764
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||| ||||||| ||||||||||| |||| |||||||||||||||| |||||| |||||    
T  12257707 aggatttgaacccgtgacctttcaatcacgtgacaacaactttacc-gttgcgtcaagg 12257764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 36589772 - 36589708
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| ||||||||||||||| ||| |||||||||  ||||| |||||||||| ||||||||||||    
T  36589772 ctgtttccaggacttgaacctg-gacgtttcagtcatgtgacatcaactttacc-gttgcgccaagg 36589708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Complemental strand, 54175085 - 54175043
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactt 86  Q
    ||||||||||| | ||||| |||||||||||||||||||||||    
T  54175085 caggacttgaatccgtgacatttcagtcacatgacaacaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 39029179 - 39029220
Alignment:
Q  49 cttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    ||||||||| |||||||| ||||||| |||||||||||||||    
T  39029179 cttgaacctatgaccttttagtcacacgacaacaactttacc 39029220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 32629382 - 32629418
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaac 81  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  32629382 aggatttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 51420580 - 51420537
Alignment:
Q  59 tgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||    
T  51420580 tgacctttcagtcacgtgacaacaacttcacc-gttgcgccaagg 51420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 9e-29; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 8247795 - 8247867
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8247795 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 8247867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 10870057 - 10870129
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10870057 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 10870129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 7696991 - 7697063
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7696991 ctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttgcgccaaggttaccc 7697063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 13730710 - 13730782
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13730710 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 13730782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 46421143 - 46421215
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  46421143 ctgtttccaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttaccc 46421215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 52926316 - 52926388
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  52926316 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 52926388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 26869758 - 26869696
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 99  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26869758 ctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 26869696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 4495773 - 4495842
Alignment:
Q  40 ttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  4495773 ttttcaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcgaaggttaccc 4495842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 1217141 - 1217069
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  1217141 ctgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttaccagttgcgccaaggttaccc 1217069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 9607254 - 9607182
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9607254 ctgtttccaggacttgaaccgatgacctttcagtcacatgacaacaactttacaagttgcgccaaggttaccc 9607182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 12914141 - 12914213
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  12914141 ctgtttccaggacttgaacttgtgacctttcggtcacattacaacaactttaccagttgcgccaaggttaccc 12914213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 29366828 - 29366900
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  29366828 ctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccagttacgccaaggttaccc 29366900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 39203559 - 39203495
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  39203559 aggacttgaacctgtgacctttcagtcacatgacaacaactttacaagttgtgccaaggttaccc 39203495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 109
Target Start/End: Original strand, 40272919 - 40272990
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40272919 tgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 40272990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 13628898 - 13628971
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaac-tttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  13628898 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttaccagttgtgccaaggttaccc 13628971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 38 - 109
Target Start/End: Original strand, 5173827 - 5173899
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaac-tttaccagttgcgccaaggttaccc 109  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  5173827 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttacgagttgcgccaaggttaccc 5173899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 16735484 - 16735420
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  16735484 aggacttgaacccgtgacgttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 16735420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 22123021 - 22123092
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 108  Q
    |||||| ||||||||||||| | |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  22123021 ctgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaatttaccagtggcgccaaggttacc 22123092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 25517297 - 25517348
Alignment:
Q  55 cctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25517297 cctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 25517348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 12525458 - 12525389
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||| ||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||    
T  12525458 ctgtttccaggactcgaacctgtgacctttcagtcatatg---acaactttaccagttgcgccaaggttaccc 12525389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 26573178 - 26573113
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  26573178 ctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 26573113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 6411927 - 6411999
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| || ||||||||||  |||||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  6411927 ctgtttacaagacttgaacccatgacctatcagttacatgacaacaactttaccagttgcgtcaaggttaccc 6411999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 22609817 - 22609746
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| || |||||||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  22609817 ctgtttccaagacttgaacccgttaccttacagtcacatgacaacaactttacc-gttgcgccaaggttaccc 22609746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 34420750 - 34420815
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||||||| | ||||||||||||    
T  34420750 ctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaacttta-ctgttgcgccaagg 34420815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 45620935 - 45621000
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| ||| ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  45620935 ctgtttccagaacttgaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 45621000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 53062089 - 53062036
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    |||||| ||||||||||||  |||||||||||||||||||||||||||||||||    
T  53062089 ctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 21875042 - 21874999
Alignment:
Q  66 tcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  21875042 tcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 21874999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 26782409 - 26782343
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 111  Q
    |||||||||| | ||||||||||| || |||||||| |||||||||| ||||| |||||||||||||    
T  26782409 aggacttgaatccgtgacctttcaatcgcatgacaataactttaccaattgcgtcaaggttaccctc 26782343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 30928253 - 30928302
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactt 86  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| |||||    
T  30928253 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaagaactt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 23871455 - 23871415
Alignment:
Q  72 acatgacaacaactttaccagttgcgccaaggttaccctcc 112  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  23871455 acatgacaacaactttactagttgcgccaaggttaccctcc 23871415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 25944518 - 25944455
Alignment:
Q  39 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||| |||||||||||||  ||||||||||||||| |||||||||||||| | ||||||||||||    
T  25944518 gtttccaggacttgaacccatgacctttcagtcacgtgacaacaacttta-ctgttgcgccaagg 25944455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 516460 - 516417
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaa 80  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  516460 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 35417967 - 35417902
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||| ||||| ||||||  ||||||| |||||||||||| |||||||||||| ||||||||||||    
T  35417967 ctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttacc-gttgcgccaagg 35417902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 7943041 - 7942993
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaact 85  Q
    |||||| ||||||||||| | |||||||| |||||||||||||||||||    
T  7943041 ctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 9276289 - 9276253
Alignment:
Q  73 catgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||||||||||||||| |||||||||||||||||||    
T  9276289 catgacaacaactttactagttgcgccaaggttaccc 9276253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 33235569 - 33235513
Alignment:
Q  50 ttgaacctgtgacctttca-gtcacatgacaacaactttaccagttgcgccaaggtt 105  Q
    |||||| |||||||||||| |||||||||||||||||||||||| |||  |||||||    
T  33235569 ttgaacttgtgacctttcatgtcacatgacaacaactttaccagctgcatcaaggtt 33235513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 33075926 - 33075977
Alignment:
Q  39 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    |||||||||| |||||| |||||||| ||| |||||||||||||| ||||||    
T  33075926 gttttcaggatttgaacatgtgacctctcaatcacatgacaacaattttacc 33075977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 11461758 - 11461807
Alignment:
Q  48 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcg 97  Q
    |||| ||||||| ||||| | |||| ||||||||||||||||||||||||    
T  11461758 acttaaacctgtaaccttcctgtcatatgacaacaactttaccagttgcg 11461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 53996673 - 53996737
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||| || |||||||||  ||||||||||||||| |||||||||| |||||| || |||||||||    
T  53996673 tgtttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttacc-gtagcgccaagg 53996737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 28904985 - 28904941
Alignment:
Q  46 ggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    |||||| ||| |||||| ||| |||||||||||||||||||||||    
T  28904985 ggacttaaacatgtgactttttagtcacatgacaacaactttacc 28904941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 9e-29; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 12024024 - 12024096
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12024024 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 12024096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 14530347 - 14530275
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14530347 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 14530275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 8455422 - 8455494
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8455422 ctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 8455494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 10543725 - 10543655
Alignment:
Q  39 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10543725 gtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttaccc 10543655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 21779372 - 21779437
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21779372 caggacttgaacccgtgacctttcagtcacatgacaacaacttcaccagttgcgccaaggttaccc 21779437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 11514465 - 11514393
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11514465 ctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 11514393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 23397795 - 23397723
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23397795 ctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcaccaaggttaccc 23397723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 25079834 - 25079896
Alignment:
Q  47 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25079834 gacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 25079896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 26684727 - 26684800
Alignment:
Q  36 tctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||| || |||||||    
T  26684727 tctgttttcaggacttaaacctttgacctttcaatcacatgacaacaactttaccagttgcgctaaagttaccc 26684800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 22371086 - 22371014
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||  ||||||||||||||||||||||||||||| |||||||||||||    
T  22371086 ctgtttccaggacttgaacccgtgacctcccagtcacatgacaacaactttaccagttgggccaaggttaccc 22371014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 24200731 - 24200803
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||  |||||||||||    
T  24200731 ctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttaccagttgcatcaaggttaccc 24200803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 25249843 - 25249915
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| || |||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  25249843 ctgtttccatgacttgaacccgtgaccttacagtcacatgacaacaactttaccaattgcgccaaggttaccc 25249915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 27573641 - 27573581
Alignment:
Q  46 ggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 106  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27573641 ggacttgaaccaatgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 27573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 17705522 - 17705452
Alignment:
Q  39 gttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||| ||||||||||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  17705522 gtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttaccagttgcaccaaggttaccc 17705452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 7214563 - 7214491
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| || ||||||||||  ||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  7214563 ctgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttaccagttgtgccaaagttaccc 7214491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 14544092 - 14544020
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||| || || |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14544092 ctgtttccagtacctggacctgtaacctttcagtcacatgacaacaactttaccaattgcgccaaggttaccc 14544020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 17896280 - 17896216
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  17896280 aggacttgaatccgtgacctttcggtcacatgacaacaactttaccagttgcgtcaaggttaccc 17896216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 19977820 - 19977892
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||| ||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||||    
T  19977820 ctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaacttcaccagttccgccaaggttaccc 19977892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 9671210 - 9671137
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttc-agtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||| ||||||| ||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  9671210 ctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaactttaccggttgcgccaaggttaccc 9671137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 5841049 - 5840985
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||| |||||||| |||||||||||||||||||||| || |||| ||||||||||||    
T  5841049 aggacttgaacccgtgaccttccagtcacatgacaacaactttatcatttgcaccaaggttaccc 5840985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 44604882 - 44604826
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagtt 94  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  44604882 tgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttagcagtt 44604826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 17668024 - 17667973
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 95  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  17668024 caggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttg 17667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 35017847 - 35017781
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttc-agtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| ||||||||||||    
T  35017847 ctgttttcaggacttaaacccgtgacctttcaagtcacatgacaacaactttacc-gttgcgccaagg 35017781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 39189556 - 39189599
Alignment:
Q  66 tcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  39189556 tcagtcacatgacaacaactttaccagttgcgccaaggttaccc 39189599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 27466262 - 27466306
Alignment:
Q  63 ctttcagtcacatgacaacaactttaccagttgcgccaaggttac 107  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  27466262 ctttcagtcacatgacaacaactttaccagttgcgccaatgttac 27466306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 99377 - 99434
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||||||||| |||||||||||||||| |||||||||||||| | ||||||||||||    
T  99377 aggacttgaacccgtgacctttcagtcacgtgacaacaacttta-ctgttgcgccaagg 99434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 5450313 - 5450263
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 88  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||||    
T  5450313 tgtttccaggaattgaacccgtgacctttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 17623585 - 17623535
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttg 95  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  17623585 aggacttgaacccgtgaccttccagtcgcatgacaacaactttaccagttg 17623535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 39914413 - 39914475
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcca 100  Q
    ||||| ||| |||||| || |||||||| |||||||||||||||||||||||||| |||||||    
T  39914413 tgtttccagtacttgatcccgtgaccttccagtcacatgacaacaactttaccagatgcgcca 39914475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 40416978 - 40417031
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 91  Q
    ||||| || |||||||||| |||||||| |||||||||||||||||||||||||    
T  40416978 tgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttacca 40417031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 24860093 - 24860157
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 102  Q
    ||||| |||| ||| |||| || ||||| ||||||||||||||||| ||||||||||||||||||    
T  24860093 tgtttccagggcttaaacccgtaaccttccagtcacatgacaacaattttaccagttgcgccaag 24860157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 25641531 - 25641487
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaac 81  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||    
T  25641531 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 4516468 - 4516522
Alignment:
Q  48 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||||  ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  4516468 acttgaatatgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 4516522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 23145803 - 23145857
Alignment:
Q  36 tctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    |||||||||| |||||||||| ||||||||||||||||   ||||||||||||||    
T  23145803 tctgttttcaagacttgaacccgtgacctttcagtcacgctacaacaactttacc 23145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 23557593 - 23557647
Alignment:
Q  36 tctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    |||||||||| |||||||||| ||||||||||||||||   ||||||||||||||    
T  23557593 tctgttttcaagacttgaacccgtgacctttcagtcacgctacaacaactttacc 23557647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 17380343 - 17380407
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||| || |||||||||| |||||||||| ||||||||||||||||||  ||| |||||||||||    
T  17380343 tgtttccaagacttgaacccgtgacctttcggtcacatgacaacaacttcgcca-ttgcgccaagg 17380407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 29419996 - 29420048
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    ||||| ||||||||||||  |||||||||||||||  ||||||||||||||||    
T  29419996 tgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaactttacc 29420048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 33795305 - 33795261
Alignment:
Q  46 ggacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||    
T  33795305 ggacttgaacccgtgacctttcaatcacgtgacaacaactttacc 33795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 21377189 - 21377232
Alignment:
Q  47 gacttgaacctgtgacctttcagtcacatgacaacaactttacc 90  Q
    |||||||||  || ||||||||||||||||||||||||||||||    
T  21377189 gacttgaactcgtaacctttcagtcacatgacaacaactttacc 21377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 31158547 - 31158598
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 88  Q
    ||||||| | ||||| ||||  ||||||||||||||||||||||||||||||    
T  31158547 ctgttttgaagactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 39499339 - 39499390
Alignment:
Q  56 ctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 107  Q
    ||||||||||  | |||||||| |||||||||||||||||||||||| ||||    
T  39499339 ctgtgaccttaaaatcacatgataacaactttaccagttgcgccaagattac 39499390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 44643540 - 44643486
Alignment:
Q  48 acttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||||||  ||||||||||||||||||||  |||||||||||| |||||||||||    
T  44643540 acttgaacacgtgacctttcagtcacatgatgacaactttacca-ttgcgccaagg 44643486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 17472986 - 17472928
Alignment:
Q  51 tgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||| |||  ||||||||||||||  ||||||| |||||||||||    
T  17472986 tgaacccgtgacctttcaatcatttgacaacaactttattagttgcgtcaaggttaccc 17472928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 4852320 - 4852388
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 108  Q
    |||||| |||||||||||||  |||| |||| ||||||||   |||||||| |||||||| |||||||||||    
T  4852320 ctgtttgcaggacttgaacccctgacttttcggtcacatg---acaactttgccagttgcaccaaggttacc 4852388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 75
Target Start/End: Complemental strand, 10546190 - 10546153
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacat 75  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  10546190 tgtttccaggacttgaacccgtgacctttcagtcacat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 4795782 - 4795730
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttac 89  Q
    ||||||||| ||||| |||  ||||| |||||||||| |||||||||||||||    
T  4795782 ctgttttcaagacttcaacaagtgacttttcagtcacgtgacaacaactttac 4795730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 19615013 - 19614981
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatga 77  Q
    |||||||||||| ||||||||||||||||||||    
T  19615013 aggacttgaacccgtgacctttcagtcacatga 19614981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 45235932 - 45235976
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttac 89  Q
    |||||||||||  |||| ||||||||||||||| |||||||||||    
T  45235932 aggacttgaactcgtgatctttcagtcacatgagaacaactttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 63; Significance: 1e-27; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 10154 - 10228
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 111  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10154 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccctc 10228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 20482 - 20556
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccctc 111  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20482 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccctc 20556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 8964 - 8902
Alignment:
Q  47 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  8964 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttaccc 8902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 19292 - 19230
Alignment:
Q  47 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  19292 gacttgaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttaccc 19230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 13129 - 13201
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13129 ctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttaccc 13201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 17507 - 17547
Alignment:
Q  69 gtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||||||||||||||||| ||||||||  ||||||||||    
T  17507 gtcacatgacaacaactttagcagttgcgttaaggttaccc 17547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 83903 - 83832
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||| || |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  83903 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggttaccc 83832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 226520 - 226583
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 108  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  226520 aggacttgaatccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 226583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 55; Significance: 8e-23; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 24883 - 24945
Alignment:
Q  47 gacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24883 gacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 24945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 46859 - 46794
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||| ||| ||||||||| ||||||||  |||||||||||||||||||||||| |||||||||||    
T  46859 tgtttccagcacttgaacccgtgaccttctagtcacatgacaacaactttaccaattgcgccaagg 46794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 46996 - 47054
Alignment:
Q  44 caggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||| | |||||||||||    
T  46996 caggacttgaactcgtgacctttcagtcacctgacaacaactttacta-ttgcgccaagg 47054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 104
Target Start/End: Original strand, 1692 - 1758
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggt 104  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  1692 tgttttcaggacttgaacccatgacctttcagtcacatgacaacaactttaccaattgcgtcaaggt 1758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 59006 - 58936
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 107  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| || |||||||||||| ||||||||||    
T  59006 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttaccagttgctccaaggttac 58936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 11160 - 11093
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtt 105  Q
    |||||| ||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  11160 ctgtttccaggacttgaacccgtgacctttcagtcacat-agaacaactttaccagttgcgccaaggtt 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 10838 - 10773
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 103  Q
    |||||||||  |||||||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  10838 tgttttcagaccttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaagg 10773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 4185 - 4117
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 107  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  4185 tgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactagttgcg-caaggttac 4117  T

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Target: scaffold0194 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 24693 - 24621
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 109  Q
    |||||| ||||||||||||| |||||||| ||||||| |||||||||||||| || ||| |||||||||||||    
T  24693 ctgtttccaggacttgaacccgtgaccttacagtcacttgacaacaactttatcaattgtgccaaggttaccc 24621  T

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Target: scaffold0116 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 8919 - 8865
Alignment:
Q  38 tgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttaccag 92  Q
    ||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  8919 tgtttccaggaattgaacctgtgaccttacagtcacatgacaacaactttaccag 8865  T

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Target: scaffold0036 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 35124 - 35194
Alignment:
Q  37 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaa-caactttaccagttgcgccaaggtta 106  Q
    |||||||||||||||||||| |||||||| ||||||||||||||  ||||||||||||||| |||| ||||    
T  35124 ctgttttcaggacttgaacccgtgaccttacagtcacatgacaataaactttaccagttgcaccaaagtta 35194  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 43150 - 43085
Alignment:
Q  45 aggacttgaacctgtgacctttcagtcacatgacaacaactttaccagtt--gcgccaaggttacc 108  Q
    ||||| |||||  ||||||||||| ||||||||||| |||||||||||||  ||||||||||||||    
T  43150 aggacctgaactcgtgacctttcaatcacatgacaataactttaccagttgcgcgccaaggttacc 43085  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 73001 - 73034
Alignment:
Q  71 cacatgacaacaactttaccagttgcgccaaggt 104  Q
    ||||||||||||||||||||||||||||||||||    
T  73001 cacatgacaacaactttaccagttgcgccaaggt 73034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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