View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10783_15 (Length: 362)
Name: NF10783_15
Description: NF10783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10783_15 |
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Alignment Details
Target: chr4 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 351
Target Start/End: Original strand, 47656662 - 47657012
Alignment:
| Q |
1 |
tttttattggtaggtttaaagttagagaatcttattcttggatctaccctgaataattacaaaaacattgtgaaccaacttaaaatcttaaatggtatnn |
100 |
Q |
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| T |
47656662 |
tttttattggtaggtttaaagttagagaatcttattcttggatctaccctgaataattacaaaaacattgtgaaccaacttagaatcttaaatggtataa |
47656761 |
T |
|
| Q |
101 |
nnnnnnttagaatcttaaataagtatgcttcagtattttgccctaatgttttcttctctttagaaatataaatgagtcgcctacctttttattattatat |
200 |
Q |
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| T |
47656762 |
aaaaaattagaatcttaaataagtatgcttcagtattttgccctaatgttttcttctctttagaaatagaaatgagtcgcctacctttttattattatat |
47656861 |
T |
|
| Q |
201 |
tttttctataactcagagccattctttctcaagagtggattctctccatannnnnnnccactcattttttaataataaaaaagaatgtcttttacttgta |
300 |
Q |
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| T |
47656862 |
tttttctataactcagagccattctttctcaagagtgggttctctccatatttttttccactcattttttaataataaaaaagaatgtcttttacttgta |
47656961 |
T |
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| Q |
301 |
tataatattnnnnnnnnttcggttgaaatttaattttaaacttatattcat |
351 |
Q |
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| T |
47656962 |
cataatattaaaaaaaattcggttgaaatttaattttaaacttatattcat |
47657012 |
T |
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