View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10783_19 (Length: 320)
Name: NF10783_19
Description: NF10783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10783_19 |
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Alignment Details
Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 24062141 - 24062098
Alignment:
| Q |
27 |
ataaatcaatcaatatgttattaacatttgtattccataactcc |
70 |
Q |
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| T |
24062141 |
ataaatcaatcaatatgttattaacatttgtattccataactcc |
24062098 |
T |
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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 24061978 - 24061941
Alignment:
| Q |
189 |
gcatttggagccatcaagagatgttgaatctattgttg |
226 |
Q |
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| T |
24061978 |
gcatttggagccatcaagagatgttgaatctattgttg |
24061941 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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