View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10783_7 (Length: 481)

Name: NF10783_7
Description: NF10783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10783_7
NF10783_7
[»] chr2 (28 HSPs)
chr2 (14-441)||(33241316-33241745)
chr2 (14-441)||(33249237-33249666)
chr2 (13-172)||(17564557-17564720)
chr2 (79-140)||(22996298-22996358)
chr2 (113-149)||(20416892-20416928)
chr2 (113-149)||(21171672-21171708)
chr2 (113-149)||(22751413-22751449)
chr2 (113-149)||(26868026-26868062)
chr2 (113-149)||(28731135-28731171)
chr2 (111-142)||(19312212-19312243)
chr2 (113-143)||(22764664-22764694)
chr2 (113-142)||(22454257-22454286)
chr2 (112-140)||(9772589-9772617)
chr2 (112-140)||(9907446-9907474)
chr2 (112-140)||(10267911-10267939)
chr2 (112-140)||(10278488-10278516)
chr2 (112-140)||(11404753-11404781)
chr2 (112-140)||(22959616-22959644)
chr2 (112-140)||(24337689-24337717)
chr2 (113-149)||(24424738-24424774)
chr2 (112-140)||(27222316-27222344)
chr2 (113-149)||(28379040-28379076)
chr2 (112-140)||(29245142-29245170)
chr2 (112-140)||(34803644-34803672)
chr2 (112-140)||(35253928-35253956)
chr2 (112-140)||(35264537-35264565)
chr2 (112-140)||(40223248-40223276)
chr2 (112-140)||(43346325-43346353)
[»] chr7 (34 HSPs)
chr7 (14-173)||(9763358-9763515)
chr7 (45-173)||(9803880-9804007)
chr7 (55-130)||(12597339-12597418)
chr7 (113-149)||(9160701-9160737)
chr7 (113-149)||(15887576-15887612)
chr7 (113-149)||(18420121-18420157)
chr7 (113-149)||(25214670-25214706)
chr7 (113-142)||(332456-332485)
chr7 (113-142)||(9709188-9709217)
chr7 (113-142)||(21696156-21696185)
chr7 (113-142)||(22577344-22577373)
chr7 (112-140)||(167809-167837)
chr7 (112-140)||(466926-466954)
chr7 (112-140)||(1988502-1988530)
chr7 (112-140)||(2715555-2715583)
chr7 (112-140)||(4212938-4212966)
chr7 (112-140)||(5686473-5686501)
chr7 (112-140)||(5711213-5711241)
chr7 (112-140)||(6877204-6877232)
chr7 (112-140)||(8012053-8012081)
chr7 (112-140)||(8618312-8618340)
chr7 (112-140)||(9086200-9086228)
chr7 (112-140)||(9434178-9434206)
chr7 (112-140)||(11006128-11006156)
chr7 (112-140)||(11096982-11097010)
chr7 (113-149)||(15217298-15217334)
chr7 (112-140)||(17960070-17960098)
chr7 (112-140)||(19993355-19993383)
chr7 (112-140)||(21002351-21002379)
chr7 (112-140)||(24735699-24735727)
chr7 (112-140)||(26400048-26400076)
chr7 (112-140)||(26699041-26699069)
chr7 (112-140)||(40052013-40052041)
chr7 (112-140)||(42866790-42866818)
[»] chr6 (34 HSPs)
chr6 (66-172)||(16742972-16743078)
chr6 (87-174)||(14171930-14172016)
chr6 (113-149)||(12359042-12359078)
chr6 (113-149)||(13913986-13914022)
chr6 (113-149)||(20059741-20059777)
chr6 (113-149)||(25734728-25734764)
chr6 (113-149)||(25794810-25794846)
chr6 (111-142)||(17782049-17782080)
chr6 (112-142)||(21625908-21625938)
chr6 (112-141)||(19483588-19483617)
chr6 (113-142)||(20112020-20112049)
chr6 (113-142)||(22802928-22802957)
chr6 (112-140)||(3662276-3662304)
chr6 (112-140)||(4631790-4631818)
chr6 (112-140)||(7669684-7669712)
chr6 (112-140)||(9122405-9122433)
chr6 (112-140)||(12726724-12726752)
chr6 (112-140)||(12855870-12855898)
chr6 (115-143)||(16878027-16878055)
chr6 (112-140)||(16931326-16931354)
chr6 (112-140)||(17981795-17981823)
chr6 (112-140)||(17983984-17984012)
chr6 (112-140)||(25590111-25590139)
chr6 (113-149)||(25685922-25685958)
chr6 (112-140)||(25788608-25788636)
chr6 (112-140)||(26026352-26026380)
chr6 (112-140)||(26865681-26865709)
chr6 (112-140)||(27342662-27342690)
chr6 (112-140)||(27385316-27385344)
chr6 (112-140)||(27403402-27403430)
chr6 (112-140)||(27475729-27475757)
chr6 (112-140)||(32310959-32310987)
chr6 (112-140)||(32971823-32971851)
chr6 (112-140)||(34817068-34817096)
[»] chr3 (48 HSPs)
chr3 (74-172)||(19642896-19642994)
chr3 (433-481)||(34899927-34899975)
chr3 (113-149)||(1054705-1054741)
chr3 (113-149)||(1793714-1793750)
chr3 (113-149)||(4405292-4405328)
chr3 (113-149)||(9005687-9005723)
chr3 (113-149)||(9390448-9390484)
chr3 (113-149)||(14320878-14320914)
chr3 (113-149)||(15226140-15226176)
chr3 (113-149)||(15661931-15661967)
chr3 (113-149)||(16670351-16670387)
chr3 (113-149)||(29905360-29905396)
chr3 (113-149)||(29946526-29946562)
chr3 (113-149)||(29995680-29995716)
chr3 (113-148)||(7803749-7803784)
chr3 (113-148)||(17909246-17909281)
chr3 (113-143)||(11215913-11215943)
chr3 (112-142)||(13120774-13120804)
chr3 (113-143)||(14008394-14008424)
chr3 (116-149)||(14582212-14582245)
chr3 (113-142)||(15834302-15834331)
chr3 (113-142)||(22141556-22141585)
chr3 (112-140)||(4744682-4744710)
chr3 (112-140)||(5511638-5511666)
chr3 (112-140)||(5546869-5546897)
chr3 (112-140)||(5627264-5627292)
chr3 (112-140)||(5875542-5875570)
chr3 (112-140)||(6219966-6219994)
chr3 (112-140)||(6500260-6500288)
chr3 (112-140)||(8775636-8775664)
chr3 (112-140)||(9993196-9993224)
chr3 (112-140)||(12248707-12248735)
chr3 (112-140)||(12296065-12296093)
chr3 (112-140)||(13122604-13122632)
chr3 (112-140)||(13382525-13382553)
chr3 (112-140)||(13393119-13393147)
chr3 (112-140)||(14466533-14466561)
chr3 (112-140)||(16390822-16390850)
chr3 (112-140)||(16477221-16477249)
chr3 (113-141)||(16812556-16812584)
chr3 (112-140)||(18485005-18485033)
chr3 (112-140)||(19779330-19779358)
chr3 (112-140)||(20683045-20683073)
chr3 (112-140)||(20722056-20722084)
chr3 (112-140)||(24660862-24660890)
chr3 (112-140)||(28324096-28324124)
chr3 (112-140)||(38195685-38195713)
chr3 (112-140)||(39373014-39373042)
[»] chr4 (22 HSPs)
chr4 (14-172)||(13306288-13306442)
chr4 (16-174)||(10327670-10327835)
chr4 (113-149)||(11516068-11516104)
chr4 (113-149)||(15206618-15206654)
chr4 (113-149)||(39520070-39520106)
chr4 (111-142)||(16818570-16818601)
chr4 (113-143)||(10291542-10291572)
chr4 (113-143)||(11536886-11536916)
chr4 (113-142)||(13575455-13575484)
chr4 (112-140)||(451539-451567)
chr4 (112-140)||(10750417-10750445)
chr4 (112-140)||(10964186-10964214)
chr4 (55-142)||(14356545-14356629)
chr4 (112-140)||(14777673-14777701)
chr4 (112-140)||(16256831-16256859)
chr4 (112-140)||(17919009-17919037)
chr4 (112-140)||(18762362-18762390)
chr4 (112-140)||(21997381-21997409)
chr4 (112-140)||(24641244-24641272)
chr4 (112-140)||(30936340-30936368)
chr4 (112-140)||(36019298-36019326)
chr4 (112-140)||(55755123-55755151)
[»] chr8 (23 HSPs)
chr8 (14-174)||(24497432-24497591)
chr8 (113-149)||(18154750-18154786)
chr8 (113-149)||(19225882-19225918)
chr8 (113-149)||(19419349-19419385)
chr8 (113-149)||(23371571-23371607)
chr8 (113-149)||(23468679-23468715)
chr8 (113-149)||(30324547-30324583)
chr8 (111-142)||(23784341-23784372)
chr8 (113-142)||(3597681-3597710)
chr8 (112-140)||(209451-209479)
chr8 (112-140)||(242777-242805)
chr8 (112-140)||(723074-723102)
chr8 (112-140)||(796147-796175)
chr8 (112-140)||(3358500-3358528)
chr8 (112-140)||(6152008-6152036)
chr8 (112-140)||(19129687-19129715)
chr8 (113-149)||(20258845-20258881)
chr8 (113-149)||(21045475-21045511)
chr8 (112-140)||(26112187-26112215)
chr8 (112-140)||(29077674-29077702)
chr8 (112-140)||(32087567-32087595)
chr8 (112-140)||(36078889-36078917)
chr8 (112-140)||(44482059-44482087)
[»] scaffold0022 (1 HSPs)
scaffold0022 (112-149)||(52786-52823)
[»] chr1 (19 HSPs)
chr1 (112-149)||(153536-153573)
chr1 (113-149)||(7680157-7680193)
chr1 (112-142)||(20883110-20883140)
chr1 (112-142)||(22643715-22643745)
chr1 (112-142)||(23067766-23067796)
chr1 (113-142)||(20953698-20953727)
chr1 (113-142)||(36134935-36134964)
chr1 (112-140)||(5649683-5649711)
chr1 (112-140)||(5834125-5834153)
chr1 (112-140)||(7508208-7508236)
chr1 (112-140)||(12623089-12623117)
chr1 (112-140)||(12731418-12731446)
chr1 (112-140)||(12742011-12742039)
chr1 (112-140)||(19179836-19179864)
chr1 (112-140)||(21864532-21864560)
chr1 (112-140)||(36246294-36246322)
chr1 (112-140)||(38095949-38095977)
chr1 (112-140)||(47617811-47617839)
chr1 (112-140)||(51655736-51655764)
[»] scaffold1002 (1 HSPs)
scaffold1002 (113-149)||(3168-3204)
[»] scaffold0739 (1 HSPs)
scaffold0739 (113-149)||(3040-3076)
[»] scaffold0497 (1 HSPs)
scaffold0497 (113-149)||(3190-3226)
[»] scaffold0411 (2 HSPs)
scaffold0411 (113-149)||(2368-2404)
scaffold0411 (113-149)||(6399-6435)
[»] scaffold0410 (1 HSPs)
scaffold0410 (113-149)||(7545-7581)
[»] scaffold0272 (1 HSPs)
scaffold0272 (113-149)||(12524-12560)
[»] scaffold0195 (1 HSPs)
scaffold0195 (113-149)||(30754-30790)
[»] scaffold0040 (1 HSPs)
scaffold0040 (113-149)||(70592-70628)
[»] scaffold0017 (2 HSPs)
scaffold0017 (113-149)||(176327-176363)
scaffold0017 (111-141)||(53103-53133)
[»] scaffold0016 (1 HSPs)
scaffold0016 (113-149)||(192922-192958)
[»] scaffold0014 (2 HSPs)
scaffold0014 (113-149)||(211533-211569)
scaffold0014 (113-149)||(217402-217438)
[»] scaffold0012 (2 HSPs)
scaffold0012 (113-149)||(20997-21033)
scaffold0012 (113-149)||(128636-128672)
[»] chr5 (38 HSPs)
chr5 (113-149)||(1110049-1110085)
chr5 (113-149)||(20561647-20561683)
chr5 (113-149)||(20797030-20797066)
chr5 (113-149)||(21415125-21415161)
chr5 (113-149)||(23405778-23405814)
chr5 (113-149)||(34061925-34061961)
chr5 (113-148)||(24927044-24927079)
chr5 (112-142)||(13524003-13524033)
chr5 (115-149)||(19477287-19477321)
chr5 (113-143)||(21519412-21519442)
chr5 (112-142)||(23479178-23479208)
chr5 (113-142)||(30743816-30743845)
chr5 (112-140)||(5291426-5291454)
chr5 (112-140)||(6985681-6985709)
chr5 (112-140)||(14039980-14040008)
chr5 (112-140)||(14558908-14558936)
chr5 (112-140)||(17617061-17617089)
chr5 (112-140)||(17728918-17728946)
chr5 (113-149)||(21661000-21661036)
chr5 (112-140)||(22156489-22156517)
chr5 (112-140)||(22685386-22685414)
chr5 (112-140)||(23306229-23306257)
chr5 (112-140)||(23371895-23371923)
chr5 (112-140)||(23706740-23706768)
chr5 (112-140)||(24588944-24588972)
chr5 (112-140)||(24817734-24817762)
chr5 (112-140)||(27043078-27043106)
chr5 (112-140)||(27469944-27469972)
chr5 (112-140)||(27604265-27604293)
chr5 (112-140)||(31358535-31358563)
chr5 (112-140)||(31447898-31447926)
chr5 (112-140)||(31843342-31843370)
chr5 (112-140)||(35225455-35225483)
chr5 (112-140)||(36583389-36583417)
chr5 (112-140)||(39361700-39361728)
chr5 (112-140)||(39491780-39491808)
chr5 (112-140)||(40400405-40400433)
chr5 (112-140)||(42052754-42052782)
[»] scaffold0547 (1 HSPs)
scaffold0547 (111-142)||(1696-1727)
[»] scaffold0185 (1 HSPs)
scaffold0185 (111-142)||(10123-10154)
[»] scaffold0080 (1 HSPs)
scaffold0080 (111-142)||(120-151)
[»] scaffold0073 (1 HSPs)
scaffold0073 (111-142)||(59283-59314)
[»] scaffold0752 (1 HSPs)
scaffold0752 (112-142)||(2831-2861)
[»] scaffold0203 (1 HSPs)
scaffold0203 (113-143)||(23390-23420)
[»] scaffold0151 (1 HSPs)
scaffold0151 (113-143)||(12215-12245)
[»] scaffold1948 (1 HSPs)
scaffold1948 (113-142)||(238-267)
[»] scaffold1260 (1 HSPs)
scaffold1260 (113-142)||(2088-2117)
[»] scaffold0607 (1 HSPs)
scaffold0607 (113-142)||(7729-7758)
[»] scaffold0414 (1 HSPs)
scaffold0414 (113-142)||(6405-6434)
[»] scaffold0315 (1 HSPs)
scaffold0315 (113-142)||(18723-18752)
[»] scaffold0207 (1 HSPs)
scaffold0207 (113-142)||(21454-21483)
[»] scaffold0056 (1 HSPs)
scaffold0056 (113-142)||(34080-34109)
[»] scaffold0011 (1 HSPs)
scaffold0011 (113-142)||(134662-134691)
[»] scaffold1216 (1 HSPs)
scaffold1216 (112-140)||(20-48)
[»] scaffold0670 (1 HSPs)
scaffold0670 (113-149)||(3440-3476)
[»] scaffold0382 (1 HSPs)
scaffold0382 (111-139)||(10547-10575)
[»] scaffold0199 (1 HSPs)
scaffold0199 (112-140)||(23555-23583)
[»] scaffold0133 (1 HSPs)
scaffold0133 (112-140)||(32057-32085)
[»] scaffold0105 (1 HSPs)
scaffold0105 (112-140)||(46876-46904)
[»] scaffold0063 (1 HSPs)
scaffold0063 (113-149)||(15862-15898)
[»] scaffold0005 (1 HSPs)
scaffold0005 (112-140)||(62029-62057)


Alignment Details
Target: chr2 (Bit Score: 322; Significance: 0; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 14 - 441
Target Start/End: Original strand, 33241316 - 33241745
Alignment:
Q  14 aaatcacattaaatctggaggctaagagataagaagattgttcctaagtcaattttaaattaacctagtggactcagagcctaagtacttattatgtctt 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| ||||||||||||||    
T  33241316 aaatcacattaaatctagaggctaagagataagaagattgttcctaagtcaattttaaattaacttagtaaactcagagcctaagcacttattatgtctt 33241415  T
Q  114 actcccccttttgtcatcaacaaaaagtaattaaaagagtgagaaaagattggataaaaacg-gatgtcgaagaatatatcataagcaaacttaatattt 212  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||  | || ||||||||| |||||||||||||||||    
T  33241416 actcccccttttgtcatcaacaaaaagtaattaaaagagtgataaaagagtggataaaaacgtgattgcaaacaatatatcagaagcaaacttaatattt 33241515  T
Q  213 caaaaatgagatctattgttacgactacaagtatcctctgtactctttcccttgagaaatattcgggttttcccatgatgcatggacgcctccaaaggag 312  Q
     ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  33241516 aaaatatgagatctattgttacgactacaagtatcctccgtactctttcccttgagaaatatttgggttttcccatgatgcatggaggcctccaaaggag 33241615  T
Q  313 agattttgaa-ttttttgaagaaaaaataagccaacggttagcttcgtggaaacatcacctgttaaacaaagctagtcgaatgactttggttaaatctgt 411  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||||| ||||||||||||| ||||||| | |||||||||||||||||||||||||    
T  33241616 agattttgaatttttttgaggaaaacataagccaacggttagcttcgtggcaacatcacctgttgaacaaagttggtcgaatgactttggttaaatctgt 33241715  T
Q  412 attaaattctattccctattattatatgca 441  Q
    ||||||||||||||||||||||||||||||    
T  33241716 attaaattctattccctattattatatgca 33241745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 14 - 441
Target Start/End: Original strand, 33249237 - 33249666
Alignment:
Q  14 aaatcacattaaatctggaggctaagagataagaagattgttcctaagtcaattttaaattaacctagtggactcagagcctaagtacttattatgtctt 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| ||||||||||||||    
T  33249237 aaatcacattaaatctagaggctaagagataagaagattgttcctaagtcaattttaaattaacttagtaaactcagagcctaagcacttattatgtctt 33249336  T
Q  114 actcccccttttgtcatcaacaaaaagtaattaaaagagtgagaaaagattggataaaaacg-gatgtcgaagaatatatcataagcaaacttaatattt 212  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||  | || ||||||||| |||||||||||||||||    
T  33249337 actcccccttttgtcatcaacaaaaagtaattaaaagagtgataaaagagtggataaaaacgtgattgcaaacaatatatcagaagcaaacttaatattt 33249436  T
Q  213 caaaaatgagatctattgttacgactacaagtatcctctgtactctttcccttgagaaatattcgggttttcccatgatgcatggacgcctccaaaggag 312  Q
     ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  33249437 aaaatatgagatctattgttacgactacaagtatcctccgtactctttcccttgagaaatatttgggttttcccatgatgcatggaggcctccaaaggag 33249536  T
Q  313 agattttgaa-ttttttgaagaaaaaataagccaacggttagcttcgtggaaacatcacctgttaaacaaagctagtcgaatgactttggttaaatctgt 411  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||||| ||||||||||||| ||||||| | |||||||||||||||||||||||||    
T  33249537 agattttgaatttttttgaggaaaacataagccaacggttagcttcgtggcaacatcacctgttgaacaaagttggtcgaatgactttggttaaatctgt 33249636  T
Q  412 attaaattctattccctattattatatgca 441  Q
    ||||||||||||||||||||||||||||||    
T  33249637 attaaattctattccctattattatatgca 33249666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 17564720 - 17564557
Alignment:
Q  13 aaaatcacattaaatctggaggctaagagataagaagattgttcctaagtcaattttaa--attaacctagtggactcagagcctaagtacttattatgt 110  Q
    ||||||||||||||||  |||||||||||||||| || |  || ||||||||| ||| |   ||||| ||||||||| ||||||||| | |||| |||||    
T  17564720 aaaatcacattaaatccagaggctaagagataagtagttgatttctaagtcaaattttatttttaacttagtggactgagagcctaaatgctta-tatgt 17564622  T
Q  111 cttactcccccttttgtcatcaacaaaa--agtaatta--aaagagtgagaaaagattggataaaa 172  Q
    |||||| ||||||||||||||| |||||  | ||| ||  ||||||| ||||||||||||||||||    
T  17564621 cttact-ccccttttgtcatcatcaaaaataataaatatgaaagagtaagaaaagattggataaaa 17564557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 22996358 - 22996298
Alignment:
Q  79 tagtggactcagagcctaagtacttattatgtcttactcccccttttgtcatcaacaaaaag 140  Q
    ||||||||||||||||||| |  ||| |||||||||||||||||||||||| ||| ||||||    
T  22996358 tagtggactcagagcctaaatg-ttaatatgtcttactcccccttttgtcaccaagaaaaag 22996298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 20416928 - 20416892
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  20416928 tactcccccttttgtcatcaacaaaaagtaaataaaa 20416892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 21171708 - 21171672
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  21171708 tactcccccttttgtcatcaacaaaaagtaagtaaaa 21171672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 22751449 - 22751413
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  22751449 tactcccccttttgtcatcaacaaaaagtaaataaaa 22751413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 26868026 - 26868062
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  26868026 tactcccccttttgtcatcaacaaaaagtaaataaaa 26868062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 28731171 - 28731135
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  28731171 tactcccccttttgtcatcaacaaaaagtaagtaaaa 28731135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 142
Target Start/End: Complemental strand, 19312243 - 19312212
Alignment:
Q  111 cttactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||||    
T  19312243 cttactcccccttttgtcatcaacaaaaagta 19312212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 143
Target Start/End: Original strand, 22764664 - 22764694
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaa 143  Q
    |||||||||||||||||||||||||||||||    
T  22764664 tactcccccttttgtcatcaacaaaaagtaa 22764694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Complemental strand, 22454286 - 22454257
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  22454286 tactcccccttttgtcatcaacaaaaagta 22454257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 9772617 - 9772589
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  9772617 ttactcccccttttgtcatcaacaaaaag 9772589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 9907474 - 9907446
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  9907474 ttactcccccttttgtcatcaacaaaaag 9907446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 10267911 - 10267939
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  10267911 ttactcccccttttgtcatcaacaaaaag 10267939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 10278488 - 10278516
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  10278488 ttactcccccttttgtcatcaacaaaaag 10278516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 11404781 - 11404753
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  11404781 ttactcccccttttgtcatcaacaaaaag 11404753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 22959644 - 22959616
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  22959644 ttactcccccttttgtcatcaacaaaaag 22959616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 24337717 - 24337689
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  24337717 ttactcccccttttgtcatcaacaaaaag 24337689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 24424774 - 24424738
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    |||||||||||||||||| |||||||||||| |||||    
T  24424774 tactcccccttttgtcattaacaaaaagtaagtaaaa 24424738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 27222316 - 27222344
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  27222316 ttactcccccttttgtcatcaacaaaaag 27222344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 28379076 - 28379040
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    |||| |||||||||||||||||||||||||| |||||    
T  28379076 tacttccccttttgtcatcaacaaaaagtaaataaaa 28379040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 29245142 - 29245170
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  29245142 ttactcccccttttgtcatcaacaaaaag 29245170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 34803672 - 34803644
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  34803672 ttactcccccttttgtcatcaacaaaaag 34803644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 35253928 - 35253956
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  35253928 ttactcccccttttgtcatcaacaaaaag 35253956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 35264537 - 35264565
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  35264537 ttactcccccttttgtcatcaacaaaaag 35264565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 40223248 - 40223276
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  40223248 ttactcccccttttgtcatcaacaaaaag 40223276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 43346325 - 43346353
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  43346325 ttactcccccttttgtcatcaacaaaaag 43346353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 4e-30; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 14 - 173
Target Start/End: Original strand, 9763358 - 9763515
Alignment:
Q  14 aaatcacatta-aatctggaggctaagagataagaagattgttcctaagtcaattttaaa-ttaacctagtggactcagagcctaagtacttattatgtc 111  Q
    ||||||||||| ||||  ||||||||||||   |||||| ||||||||||||| |||||| ||||| |||||||||||||||||   | || ||||||||    
T  9763358 aaatcacattacaatccagaggctaagaga---gaagatggttcctaagtcaagtttaaagttaacttagtggactcagagcctggatgct-attatgtc 9763453  T
Q  112 ttactcccccttttgtcatcaacaaaaagtaattaaaagagtgagaaaagattggataaaaa 173  Q
    ||||||| |||||||||||||||||||| || | |||||||| |||||||||||||||||||    
T  9763454 ttactcctccttttgtcatcaacaaaaattattgaaaagagtaagaaaagattggataaaaa 9763515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 45 - 173
Target Start/End: Original strand, 9803880 - 9804007
Alignment:
Q  45 agaagattgttcctaagtcaa-ttttaaattaacctagtggactcagagcctaagtacttattatgtcttactcccccttttgtcatcaacaaaaagtaa 143  Q
    ||||||| ||||||||||||| |||||| ||||| ||||| |||||||||||   | || ||||||||||||||| ||||| |||||||||||||| ||     
T  9803880 agaagatggttcctaagtcaagttttaagttaacttagtgtactcagagccttgatgct-attatgtcttactcctccttt-gtcatcaacaaaaattat 9803977  T
Q  144 ttaaaagagtgagaaaagattggataaaaa 173  Q
    | |||||||| |||||||||||||||||||    
T  9803978 tgaaaagagtaagaaaagattggataaaaa 9804007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 12597418 - 12597339
Alignment:
Q  55 tcctaagtcaattttaaattaacctagtggactcagagcctaagta--cttatt---atgtcttactcccccttttgtcat 130  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||   |||||   ||||||||||||||||||||||||    
T  12597418 tcctaagtaaattttaa-ttaacctagtggactcagagcctaaatattattattctcatgtcttactcccccttttgtcat 12597339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 9160701 - 9160737
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  9160701 tactcccccttttgtcatcaacaaaaagtaagtaaaa 9160737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 15887612 - 15887576
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  15887612 tactcccccttttgtcatcaacaaaaagtaagtaaaa 15887576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 18420121 - 18420157
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  18420121 tactcccccttttgtcatcaacaaaaagtaaataaaa 18420157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 25214706 - 25214670
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  25214706 tactcccccttttgtcatcaacaaaaagtaaataaaa 25214670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Original strand, 332456 - 332485
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  332456 tactcccccttttgtcatcaacaaaaagta 332485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Complemental strand, 9709217 - 9709188
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  9709217 tactcccccttttgtcatcaacaaaaagta 9709188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Original strand, 21696156 - 21696185
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  21696156 tactcccccttttgtcatcaacaaaaagta 21696185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Complemental strand, 22577373 - 22577344
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  22577373 tactcccccttttgtcatcaacaaaaagta 22577344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 167809 - 167837
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  167809 ttactcccccttttgtcatcaacaaaaag 167837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 466954 - 466926
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  466954 ttactcccccttttgtcatcaacaaaaag 466926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 1988502 - 1988530
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  1988502 ttactcccccttttgtcatcaacaaaaag 1988530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 2715583 - 2715555
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  2715583 ttactcccccttttgtcatcaacaaaaag 2715555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 4212938 - 4212966
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  4212938 ttactcccccttttgtcatcaacaaaaag 4212966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 5686473 - 5686501
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  5686473 ttactcccccttttgtcatcaacaaaaag 5686501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 5711213 - 5711241
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  5711213 ttactcccccttttgtcatcaacaaaaag 5711241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 6877232 - 6877204
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  6877232 ttactcccccttttgtcatcaacaaaaag 6877204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 8012081 - 8012053
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  8012081 ttactcccccttttgtcatcaacaaaaag 8012053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 8618312 - 8618340
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  8618312 ttactcccccttttgtcatcaacaaaaag 8618340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 9086200 - 9086228
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  9086200 ttactcccccttttgtcatcaacaaaaag 9086228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 9434178 - 9434206
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  9434178 ttactcccccttttgtcatcaacaaaaag 9434206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 11006128 - 11006156
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  11006128 ttactcccccttttgtcatcaacaaaaag 11006156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 11096982 - 11097010
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  11096982 ttactcccccttttgtcatcaacaaaaag 11097010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 15217298 - 15217334
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  15217298 tactcccccttttgtcatcaacaaaaaataaataaaa 15217334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 17960098 - 17960070
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  17960098 ttactcccccttttgtcatcaacaaaaag 17960070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 19993383 - 19993355
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  19993383 ttactcccccttttgtcatcaacaaaaag 19993355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 21002379 - 21002351
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  21002379 ttactcccccttttgtcatcaacaaaaag 21002351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 24735699 - 24735727
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  24735699 ttactcccccttttgtcatcaacaaaaag 24735727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 26400076 - 26400048
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  26400076 ttactcccccttttgtcatcaacaaaaag 26400048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 26699069 - 26699041
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  26699069 ttactcccccttttgtcatcaacaaaaag 26699041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 40052041 - 40052013
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  40052041 ttactcccccttttgtcatcaacaaaaag 40052013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 42866790 - 42866818
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  42866790 ttactcccccttttgtcatcaacaaaaag 42866818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 8e-22; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 66 - 172
Target Start/End: Original strand, 16742972 - 16743078
Alignment:
Q  66 ttttaaattaacctagtggactcagagcctaagtacttattatgtcttactcccccttttgtcatcaacaaaaagtaatt--aaaagagtgagaaaagat 163  Q
    |||| |||||||||||||||||||||||||||  || |||||| |||||||| ||||||| ||||||||||||| |||||  |||||||| |||||||||    
T  16742972 tttttaattaacctagtggactcagagcctaaacac-tattatatcttactctcccttttatcatcaacaaaaa-taatttgaaaagagtaagaaaagat 16743069  T
Q  164 tggataaaa 172  Q
    |||||||||    
T  16743070 tggataaaa 16743078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 14172016 - 14171930
Alignment:
Q  87 tcagagcctaagtacttattatgtcttactcccccttttgtcatcaacaaaaagtaatt-aaaagagtgagaaaagattggataaaaac 174  Q
    |||||||||||  |||| ||||||||||||||| |||| ||||| |||||||| ||||| |||| |||||||||||||| |||||||||    
T  14172016 tcagagcctaaacactt-ttatgtcttactcccgctttcgtcataaacaaaaa-taattgaaaaaagtgagaaaagatttgataaaaac 14171930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 12359042 - 12359078
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  12359042 tactcccccttttgtcatcaacaaaaagtaagtaaaa 12359078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 13913986 - 13914022
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  13913986 tactcccccttttgtcatcaacaaaaagtaaataaaa 13914022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 20059777 - 20059741
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  20059777 tactcccccttttgtcatcaacaaaaagtaagtaaaa 20059741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 25734764 - 25734728
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  25734764 tactcccccttttgtcatcaacaaaaagtaaataaaa 25734728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 25794810 - 25794846
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  25794810 tactcccccttttgtcatcaacaaaaagtaagtaaaa 25794846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 142
Target Start/End: Original strand, 17782049 - 17782080
Alignment:
Q  111 cttactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||||    
T  17782049 cttactcccccttttgtcatcaacaaaaagta 17782080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 142
Target Start/End: Original strand, 21625908 - 21625938
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaagta 142  Q
    |||||||||||||||||||||||||||||||    
T  21625908 ttactcccccttttgtcatcaacaaaaagta 21625938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 19483588 - 19483617
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaagt 141  Q
    ||||||||||||||||||||||||||||||    
T  19483588 ttactcccccttttgtcatcaacaaaaagt 19483617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Complemental strand, 20112049 - 20112020
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  20112049 tactcccccttttgtcatcaacaaaaagta 20112020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Original strand, 22802928 - 22802957
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  22802928 tactcccccttttgtcatcaacaaaaagta 22802957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 3662276 - 3662304
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  3662276 ttactcccccttttgtcatcaacaaaaag 3662304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 4631790 - 4631818
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  4631790 ttactcccccttttgtcatcaacaaaaag 4631818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 7669712 - 7669684
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  7669712 ttactcccccttttgtcatcaacaaaaag 7669684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 9122433 - 9122405
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  9122433 ttactcccccttttgtcatcaacaaaaag 9122405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 12726752 - 12726724
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  12726752 ttactcccccttttgtcatcaacaaaaag 12726724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 12855870 - 12855898
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  12855870 ttactcccccttttgtcatcaacaaaaag 12855898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 16878027 - 16878055
Alignment:
Q  115 ctcccccttttgtcatcaacaaaaagtaa 143  Q
    |||||||||||||||||||||||||||||    
T  16878027 ctcccccttttgtcatcaacaaaaagtaa 16878055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 16931326 - 16931354
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  16931326 ttactcccccttttgtcatcaacaaaaag 16931354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 17981823 - 17981795
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  17981823 ttactcccccttttgtcatcaacaaaaag 17981795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 17984012 - 17983984
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  17984012 ttactcccccttttgtcatcaacaaaaag 17983984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 25590111 - 25590139
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  25590111 ttactcccccttttgtcatcaacaaaaag 25590139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 25685958 - 25685922
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    |||||||||||||||||||||||||| |||| |||||    
T  25685958 tactcccccttttgtcatcaacaaaacgtaaataaaa 25685922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 25788608 - 25788636
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  25788608 ttactcccccttttgtcatcaacaaaaag 25788636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 26026352 - 26026380
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  26026352 ttactcccccttttgtcatcaacaaaaag 26026380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 26865681 - 26865709
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  26865681 ttactcccccttttgtcatcaacaaaaag 26865709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 27342662 - 27342690
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  27342662 ttactcccccttttgtcatcaacaaaaag 27342690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 27385316 - 27385344
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  27385316 ttactcccccttttgtcatcaacaaaaag 27385344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 27403402 - 27403430
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  27403402 ttactcccccttttgtcatcaacaaaaag 27403430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 27475729 - 27475757
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  27475729 ttactcccccttttgtcatcaacaaaaag 27475757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 32310987 - 32310959
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  32310987 ttactcccccttttgtcatcaacaaaaag 32310959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 32971851 - 32971823
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  32971851 ttactcccccttttgtcatcaacaaaaag 32971823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 34817096 - 34817068
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  34817096 ttactcccccttttgtcatcaacaaaaag 34817068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 19642994 - 19642896
Alignment:
Q  74 taacctagtggactcagagcctaagtacttattatgt--cttactcccccttttgtcatcaacaaaaagtaattaaaagagtgagaaaagattggataaa 171  Q
    ||||| |||||||||||||||||| |||| |||||||  ||||||||||||||||||||||||||||| | || |||||||| |||||| ||||||||||    
T  19642994 taacccagtggactcagagcctaaatact-attatgtgtcttactcccccttttgtcatcaacaaaaa-ttataaaaagagtaagaaaatattggataaa 19642897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 433 - 481
Target Start/End: Original strand, 34899927 - 34899975
Alignment:
Q  433 ttatatgcatataggtaaagtttggtagtttcaactttcaagttgagat 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34899927 ttatatgcatataggtaaagtttggtagtttcaactttcaagttgagat 34899975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 1054705 - 1054741
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  1054705 tactcccccttttgtcatcaacaaaaagtaaataaaa 1054741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 1793750 - 1793714
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  1793750 tactcccccttttgtcatcaacaaaaagtaaataaaa 1793714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 4405292 - 4405328
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  4405292 tactcccccttttgtcatcaacaaaaagtaaataaaa 4405328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 9005723 - 9005687
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  9005723 tactcccccttttgtcatcaacaaaaagtaaataaaa 9005687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 9390484 - 9390448
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  9390484 tactcccccttttgtcatcaacaaaaagtaagtaaaa 9390448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 14320914 - 14320878
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  14320914 tactcccccttttgtcatcaacaaaaagtaaataaaa 14320878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 15226176 - 15226140
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  15226176 tactcccccttttgtcatcaacaaaaagtaaataaaa 15226140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 15661967 - 15661931
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  15661967 tactcccccttttgtcatcaacaaaaagtaaataaaa 15661931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 16670387 - 16670351
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  16670387 tactcccccttttgtcatcaacaaaaagtaaataaaa 16670351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 29905396 - 29905360
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  29905396 tactcccccttttgtcatcaacaaaaagtaaataaaa 29905360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 29946562 - 29946526
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  29946562 tactcccccttttgtcatcaacaaaaagtaaataaaa 29946526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 29995716 - 29995680
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  29995716 tactcccccttttgtcatcaacaaaaagtaaataaaa 29995680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 148
Target Start/End: Complemental strand, 7803784 - 7803749
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaa 148  Q
    ||||||||||||||||||||||||||||||| ||||    
T  7803784 tactcccccttttgtcatcaacaaaaagtaagtaaa 7803749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 148
Target Start/End: Complemental strand, 17909281 - 17909246
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaa 148  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17909281 tactcccccttttgtcatcaacaaaaagtaagtaaa 17909246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 143
Target Start/End: Complemental strand, 11215943 - 11215913
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaa 143  Q
    |||||||||||||||||||||||||||||||    
T  11215943 tactcccccttttgtcatcaacaaaaagtaa 11215913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 142
Target Start/End: Original strand, 13120774 - 13120804
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaagta 142  Q
    |||||||||||||||||||||||||||||||    
T  13120774 ttactcccccttttgtcatcaacaaaaagta 13120804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 143
Target Start/End: Original strand, 14008394 - 14008424
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaa 143  Q
    |||||||||||||||||||||||||||||||    
T  14008394 tactcccccttttgtcatcaacaaaaagtaa 14008424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 149
Target Start/End: Original strand, 14582212 - 14582245
Alignment:
Q  116 tcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    |||||||||||||||||||||||||||| |||||    
T  14582212 tcccccttttgtcatcaacaaaaagtaaataaaa 14582245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Original strand, 15834302 - 15834331
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  15834302 tactcccccttttgtcatcaacaaaaagta 15834331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Original strand, 22141556 - 22141585
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  22141556 tactcccccttttgtcatcaacaaaaagta 22141585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 4744682 - 4744710
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  4744682 ttactcccccttttgtcatcaacaaaaag 4744710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 5511638 - 5511666
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  5511638 ttactcccccttttgtcatcaacaaaaag 5511666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 5546897 - 5546869
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  5546897 ttactcccccttttgtcatcaacaaaaag 5546869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 5627292 - 5627264
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  5627292 ttactcccccttttgtcatcaacaaaaag 5627264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 5875570 - 5875542
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  5875570 ttactcccccttttgtcatcaacaaaaag 5875542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 6219994 - 6219966
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  6219994 ttactcccccttttgtcatcaacaaaaag 6219966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 6500288 - 6500260
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  6500288 ttactcccccttttgtcatcaacaaaaag 6500260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 8775636 - 8775664
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  8775636 ttactcccccttttgtcatcaacaaaaag 8775664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 9993224 - 9993196
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  9993224 ttactcccccttttgtcatcaacaaaaag 9993196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 12248735 - 12248707
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  12248735 ttactcccccttttgtcatcaacaaaaag 12248707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 12296093 - 12296065
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  12296093 ttactcccccttttgtcatcaacaaaaag 12296065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 13122604 - 13122632
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  13122604 ttactcccccttttgtcatcaacaaaaag 13122632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 13382553 - 13382525
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  13382553 ttactcccccttttgtcatcaacaaaaag 13382525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 13393147 - 13393119
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  13393147 ttactcccccttttgtcatcaacaaaaag 13393119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 14466533 - 14466561
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  14466533 ttactcccccttttgtcatcaacaaaaag 14466561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 16390850 - 16390822
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  16390850 ttactcccccttttgtcatcaacaaaaag 16390822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 16477221 - 16477249
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  16477221 ttactcccccttttgtcatcaacaaaaag 16477249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 16812556 - 16812584
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagt 141  Q
    |||||||||||||||||||||||||||||    
T  16812556 tactcccccttttgtcatcaacaaaaagt 16812584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 18485005 - 18485033
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  18485005 ttactcccccttttgtcatcaacaaaaag 18485033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 19779330 - 19779358
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  19779330 ttactcccccttttgtcatcaacaaaaag 19779358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 20683073 - 20683045
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  20683073 ttactcccccttttgtcatcaacaaaaag 20683045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 20722056 - 20722084
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  20722056 ttactcccccttttgtcatcaacaaaaag 20722084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 24660862 - 24660890
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  24660862 ttactcccccttttgtcatcaacaaaaag 24660890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 28324124 - 28324096
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  28324124 ttactcccccttttgtcatcaacaaaaag 28324096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 38195685 - 38195713
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  38195685 ttactcccccttttgtcatcaacaaaaag 38195713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 39373014 - 39373042
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  39373014 ttactcccccttttgtcatcaacaaaaag 39373042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 13306442 - 13306288
Alignment:
Q  14 aaatcacattaaatctggaggctaagagataagaagattgttcctaagtcaa-ttttaaattaacctagtggactcagagcctaagtacttattatgtct 112  Q
    |||||||||||||||   | |||||||| ||||||| |  ||||||||| || ||||||||  |  |||||||||||   ||||| ||||||| ||||||    
T  13306442 aaatcacattaaatccataagctaagaggtaagaagttgattcctaagttaaattttaaatgtatttagtggactcaa--cctaaatacttat-atgtct 13306346  T
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaagagtgagaaaagattggataaaa 172  Q
    |||||||| |||| ||||||||||||| |||| |||||||| ||||||||||||||||||    
T  13306345 tactcccc-ttttctcatcaacaaaaa-taatgaaaagagtaagaaaagattggataaaa 13306288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 10327835 - 10327670
Alignment:
Q  16 atcacattaaatctggaggctaagagataagaagattgtt--cctaagtcaattttaaattaacctagtggactcagagcctaagtac--ttattatgtc 111  Q
    ||||||||| |||  ||||||||||||| ||||||  |||  ||||| | |||||||  ||||| ||| ||||||||||||||| | |  |||| |||||    
T  10327835 atcacattatatccagaggctaagagatgagaagaaggttttcctaaattaattttat-ttaacttagcggactcagagcctaaatgccattat-atgtc 10327738  T
Q  112 ttactcccccttttgtcatcaacaaaaagtaatt-----aaaagagtgagaaaagattggataaaaac 174  Q
    ||||||||||||||||||||||||||||  | ||     |||||||| ||||||||||||||||||||    
T  10327737 ttactcccccttttgtcatcaacaaaaaaaagttataaaaaaagagtaagaaaagattggataaaaac 10327670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 11516068 - 11516104
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  11516068 tactcccccttttgtcatcaacaaaaagtaaataaaa 11516104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 15206654 - 15206618
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  15206654 tactcccccttttgtcatcaacaaaaagtaaataaaa 15206618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 39520106 - 39520070
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  39520106 tactcccccttttgtcatcaacaaaaagtaaataaaa 39520070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 142
Target Start/End: Complemental strand, 16818601 - 16818570
Alignment:
Q  111 cttactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||||    
T  16818601 cttactcccccttttgtcatcaacaaaaagta 16818570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 143
Target Start/End: Original strand, 10291542 - 10291572
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaa 143  Q
    |||||||||||||||||||||||||||||||    
T  10291542 tactcccccttttgtcatcaacaaaaagtaa 10291572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 143
Target Start/End: Original strand, 11536886 - 11536916
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaa 143  Q
    |||||||||||||||||||||||||||||||    
T  11536886 tactcccccttttgtcatcaacaaaaagtaa 11536916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Complemental strand, 13575484 - 13575455
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  13575484 tactcccccttttgtcatcaacaaaaagta 13575455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 451539 - 451567
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  451539 ttactcccccttttgtcatcaacaaaaag 451567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 10750445 - 10750417
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  10750445 ttactcccccttttgtcatcaacaaaaag 10750417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 10964214 - 10964186
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  10964214 ttactcccccttttgtcatcaacaaaaag 10964186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 14356629 - 14356545
Alignment:
Q  55 tcctaagtcaattttaaattaacctagtggactcagagcctaagtacttattatgtcttactcccccttttgtcatcaacaaaaagta 142  Q
    |||||| | |||||||| ||||  ||||||||||||| |||||  |  || |||||| |||||||| |||||||||||||||||||||    
T  14356629 tcctaaattaattttaagttaatttagtggactcagaacctaa--atgtactatgtc-tactccccattttgtcatcaacaaaaagta 14356545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 14777701 - 14777673
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  14777701 ttactcccccttttgtcatcaacaaaaag 14777673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 16256831 - 16256859
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  16256831 ttactcccccttttgtcatcaacaaaaag 16256859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 17919009 - 17919037
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  17919009 ttactcccccttttgtcatcaacaaaaag 17919037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 18762390 - 18762362
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  18762390 ttactcccccttttgtcatcaacaaaaag 18762362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 21997381 - 21997409
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  21997381 ttactcccccttttgtcatcaacaaaaag 21997409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 24641244 - 24641272
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  24641244 ttactcccccttttgtcatcaacaaaaag 24641272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 30936368 - 30936340
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  30936368 ttactcccccttttgtcatcaacaaaaag 30936340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 36019298 - 36019326
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  36019298 ttactcccccttttgtcatcaacaaaaag 36019326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 55755151 - 55755123
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  55755151 ttactcccccttttgtcatcaacaaaaag 55755123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 24497591 - 24497432
Alignment:
Q  14 aaatcacattaaatctggaggctaagagataagaagattgttcctaagtc-aattttaaattaacctagtggactcagagcctaagtacttattatgtct 112  Q
    ||||||||||||| |  ||||| ||||| | ||||| |  ||| |||||| ||||||||||| || ||  ||||||||||||||| |||||| ||| | |    
T  24497591 aaatcacattaaaacccgaggcaaagaggtgagaagttgattcttaagtccaattttaaatttacttataggactcagagcctaaatactta-tatattt 24497493  T
Q  113 tactcccccttttgtcatcaacaaaaagtaatt-aaaagagtgagaaaagattggataaaaac 174  Q
    |||| |||||||||||||| | ||||| ||||| |||| ||| ||||||||||| ||||||||    
T  24497492 tact-ccccttttgtcatc-ataaaaaataattgaaaaaagtaagaaaagattgaataaaaac 24497432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 18154750 - 18154786
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  18154750 tactcccccttttgtcatcaacaaaaagtaaataaaa 18154786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 19225882 - 19225918
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  19225882 tactcccccttttgtcatcaacaaaaagtaagtaaaa 19225918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 19419349 - 19419385
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  19419349 tactcccccttttgtcatcaacaaaaagtaagtaaaa 19419385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 23371571 - 23371607
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  23371571 tactcccccttttgtcatcaacaaaaagtaagtaaaa 23371607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 23468715 - 23468679
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  23468715 tactcccccttttgtcatcaacaaaaagtaagtaaaa 23468679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 30324583 - 30324547
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  30324583 tactcccccttttgtcatcaacaaaaagtaagtaaaa 30324547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 142
Target Start/End: Original strand, 23784341 - 23784372
Alignment:
Q  111 cttactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||||    
T  23784341 cttactcccccttttgtcatcaacaaaaagta 23784372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Complemental strand, 3597710 - 3597681
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  3597710 tactcccccttttgtcatcaacaaaaagta 3597681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 209479 - 209451
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  209479 ttactcccccttttgtcatcaacaaaaag 209451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 242777 - 242805
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  242777 ttactcccccttttgtcatcaacaaaaag 242805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 723102 - 723074
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  723102 ttactcccccttttgtcatcaacaaaaag 723074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 796147 - 796175
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  796147 ttactcccccttttgtcatcaacaaaaag 796175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 3358528 - 3358500
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  3358528 ttactcccccttttgtcatcaacaaaaag 3358500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 6152008 - 6152036
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  6152008 ttactcccccttttgtcatcaacaaaaag 6152036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 19129687 - 19129715
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  19129687 ttactcccccttttgtcatcaacaaaaag 19129715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 20258881 - 20258845
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  20258881 tactcccccttttgtcatcaataaaaagtaaataaaa 20258845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 21045511 - 21045475
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  21045511 tactcccccttttgtcatcaataaaaagtaaataaaa 21045475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 26112187 - 26112215
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  26112187 ttactcccccttttgtcatcaacaaaaag 26112215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 29077674 - 29077702
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  29077674 ttactcccccttttgtcatcaacaaaaag 29077702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 32087595 - 32087567
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  32087595 ttactcccccttttgtcatcaacaaaaag 32087567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 36078889 - 36078917
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  36078889 ttactcccccttttgtcatcaacaaaaag 36078917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 44482059 - 44482087
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  44482059 ttactcccccttttgtcatcaacaaaaag 44482087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 52823 - 52786
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    |||||||||||||||||||||||||||||||| |||||    
T  52823 ttactcccccttttgtcatcaacaaaaagtaagtaaaa 52786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000007; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 153573 - 153536
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    |||||||||||||||||||||||||||||||| |||||    
T  153573 ttactcccccttttgtcatcaacaaaaagtaagtaaaa 153536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 7680157 - 7680193
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  7680157 tactcccccttttgtcatcaacaaaaagtaagtaaaa 7680193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 142
Target Start/End: Complemental strand, 20883140 - 20883110
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaagta 142  Q
    |||||||||||||||||||||||||||||||    
T  20883140 ttactcccccttttgtcatcaacaaaaagta 20883110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 142
Target Start/End: Original strand, 22643715 - 22643745
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaagta 142  Q
    |||||||||||||||||||||||||||||||    
T  22643715 ttactcccccttttgtcatcaacaaaaagta 22643745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 142
Target Start/End: Original strand, 23067766 - 23067796
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaagta 142  Q
    |||||||||||||||||||||||||||||||    
T  23067766 ttactcccccttttgtcatcaacaaaaagta 23067796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Complemental strand, 20953727 - 20953698
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  20953727 tactcccccttttgtcatcaacaaaaagta 20953698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Original strand, 36134935 - 36134964
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  36134935 tactcccccttttgtcatcaacaaaaagta 36134964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 5649711 - 5649683
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  5649711 ttactcccccttttgtcatcaacaaaaag 5649683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 5834125 - 5834153
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  5834125 ttactcccccttttgtcatcaacaaaaag 5834153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 7508208 - 7508236
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  7508208 ttactcccccttttgtcatcaacaaaaag 7508236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 12623117 - 12623089
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  12623117 ttactcccccttttgtcatcaacaaaaag 12623089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 12731418 - 12731446
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  12731418 ttactcccccttttgtcatcaacaaaaag 12731446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 12742011 - 12742039
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  12742011 ttactcccccttttgtcatcaacaaaaag 12742039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 19179836 - 19179864
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  19179836 ttactcccccttttgtcatcaacaaaaag 19179864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 21864532 - 21864560
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  21864532 ttactcccccttttgtcatcaacaaaaag 21864560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 36246322 - 36246294
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  36246322 ttactcccccttttgtcatcaacaaaaag 36246294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 38095949 - 38095977
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  38095949 ttactcccccttttgtcatcaacaaaaag 38095977  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 47617839 - 47617811
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  47617839 ttactcccccttttgtcatcaacaaaaag 47617811  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 51655764 - 51655736
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  51655764 ttactcccccttttgtcatcaacaaaaag 51655736  T

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Target: scaffold1002 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1002
Description:

Target: scaffold1002; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 3204 - 3168
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  3204 tactcccccttttgtcatcaacaaaaagtaagtaaaa 3168  T

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Target: scaffold0739 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 3040 - 3076
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  3040 tactcccccttttgtcatcaacaaaaagtaaataaaa 3076  T

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Target: scaffold0497 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 3226 - 3190
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  3226 tactcccccttttgtcatcaacaaaaagtaaataaaa 3190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 2404 - 2368
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  2404 tactcccccttttgtcatcaacaaaaagtaaataaaa 2368  T

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Target: scaffold0411; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 6435 - 6399
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  6435 tactcccccttttgtcatcaacaaaaagtaaataaaa 6399  T

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Target: scaffold0410 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 7545 - 7581
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  7545 tactcccccttttgtcatcaacaaaaagtaaataaaa 7581  T

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Target: scaffold0272 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 12560 - 12524
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  12560 tactcccccttttgtcatcaacaaaaagtaaataaaa 12524  T

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Target: scaffold0195 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 30754 - 30790
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  30754 tactcccccttttgtcatcaacaaaaagtaaataaaa 30790  T

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Target: scaffold0040 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 70592 - 70628
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  70592 tactcccccttttgtcatcaacaaaaagtaaataaaa 70628  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 176327 - 176363
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  176327 tactcccccttttgtcatcaacaaaaagtaactaaaa 176363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 141
Target Start/End: Complemental strand, 53133 - 53103
Alignment:
Q  111 cttactcccccttttgtcatcaacaaaaagt 141  Q
    |||||||||||||||||||||||||||||||    
T  53133 cttactcccccttttgtcatcaacaaaaagt 53103  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 192922 - 192958
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  192922 tactcccccttttgtcatcaacaaaaagtaagtaaaa 192958  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 211533 - 211569
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  211533 tactcccccttttgtcatcaacaaaaagtaaataaaa 211569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 217402 - 217438
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  217402 tactcccccttttgtcatcaacaaaaagtaaataaaa 217438  T

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Target: scaffold0012 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 20997 - 21033
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  20997 tactcccccttttgtcatcaacaaaaagtaaataaaa 21033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 128636 - 128672
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  128636 tactcccccttttgtcatcaacaaaaagtaaataaaa 128672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 1110049 - 1110085
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  1110049 tactcccccttttgtcatcaacaaaaagtaagtaaaa 1110085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 20561683 - 20561647
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  20561683 tactcccccttttgtcatcaacaaaaagtaagtaaaa 20561647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 20797066 - 20797030
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  20797066 tactcccccttttgtcatcaacaaaaagtaagtaaaa 20797030  T

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Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 21415125 - 21415161
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  21415125 tactcccccttttgtcatcaacaaaaagtaaataaaa 21415161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 23405814 - 23405778
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  23405814 tactcccccttttgtcatcaacaaaaagtaagtaaaa 23405778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 34061961 - 34061925
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||||| |||||    
T  34061961 tactcccccttttgtcatcaacaaaaagtaaataaaa 34061925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 148
Target Start/End: Original strand, 24927044 - 24927079
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaa 148  Q
    ||||||||||||||||||||||||||||||| ||||    
T  24927044 tactcccccttttgtcatcaacaaaaagtaagtaaa 24927079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 142
Target Start/End: Original strand, 13524003 - 13524033
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaagta 142  Q
    |||||||||||||||||||||||||||||||    
T  13524003 ttactcccccttttgtcatcaacaaaaagta 13524033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 149
Target Start/End: Complemental strand, 19477321 - 19477287
Alignment:
Q  115 ctcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||||| |||||    
T  19477321 ctcccccttttgtcatcaacaaaaagtaagtaaaa 19477287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 143
Target Start/End: Complemental strand, 21519442 - 21519412
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaa 143  Q
    |||||||||||||||||||||||||||||||    
T  21519442 tactcccccttttgtcatcaacaaaaagtaa 21519412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 142
Target Start/End: Original strand, 23479178 - 23479208
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaagta 142  Q
    |||||||||||||||||||||||||||||||    
T  23479178 ttactcccccttttgtcatcaacaaaaagta 23479208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Original strand, 30743816 - 30743845
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  30743816 tactcccccttttgtcatcaacaaaaagta 30743845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 5291426 - 5291454
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  5291426 ttactcccccttttgtcatcaacaaaaag 5291454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 6985709 - 6985681
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  6985709 ttactcccccttttgtcatcaacaaaaag 6985681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 14040008 - 14039980
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  14040008 ttactcccccttttgtcatcaacaaaaag 14039980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 14558908 - 14558936
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  14558908 ttactcccccttttgtcatcaacaaaaag 14558936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 17617089 - 17617061
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  17617089 ttactcccccttttgtcatcaacaaaaag 17617061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 17728946 - 17728918
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  17728946 ttactcccccttttgtcatcaacaaaaag 17728918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 21661000 - 21661036
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  21661000 tactctcccttttgtcatcaacaaaaagaaattaaaa 21661036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 22156517 - 22156489
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  22156517 ttactcccccttttgtcatcaacaaaaag 22156489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 22685414 - 22685386
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  22685414 ttactcccccttttgtcatcaacaaaaag 22685386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 23306257 - 23306229
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  23306257 ttactcccccttttgtcatcaacaaaaag 23306229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 23371923 - 23371895
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  23371923 ttactcccccttttgtcatcaacaaaaag 23371895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 23706768 - 23706740
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  23706768 ttactcccccttttgtcatcaacaaaaag 23706740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 24588944 - 24588972
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  24588944 ttactcccccttttgtcatcaacaaaaag 24588972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 24817734 - 24817762
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  24817734 ttactcccccttttgtcatcaacaaaaag 24817762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 27043078 - 27043106
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  27043078 ttactcccccttttgtcatcaacaaaaag 27043106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 27469972 - 27469944
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  27469972 ttactcccccttttgtcatcaacaaaaag 27469944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 27604265 - 27604293
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  27604265 ttactcccccttttgtcatcaacaaaaag 27604293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 31358563 - 31358535
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  31358563 ttactcccccttttgtcatcaacaaaaag 31358535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 31447926 - 31447898
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  31447926 ttactcccccttttgtcatcaacaaaaag 31447898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 31843370 - 31843342
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  31843370 ttactcccccttttgtcatcaacaaaaag 31843342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 35225483 - 35225455
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  35225483 ttactcccccttttgtcatcaacaaaaag 35225455  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 36583389 - 36583417
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  36583389 ttactcccccttttgtcatcaacaaaaag 36583417  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 39361728 - 39361700
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  39361728 ttactcccccttttgtcatcaacaaaaag 39361700  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 39491780 - 39491808
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  39491780 ttactcccccttttgtcatcaacaaaaag 39491808  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 40400433 - 40400405
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  40400433 ttactcccccttttgtcatcaacaaaaag 40400405  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 42052782 - 42052754
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  42052782 ttactcccccttttgtcatcaacaaaaag 42052754  T

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Target: scaffold0547 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 142
Target Start/End: Original strand, 1696 - 1727
Alignment:
Q  111 cttactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||||    
T  1696 cttactcccccttttgtcatcaacaaaaagta 1727  T

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Target: scaffold0185 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 142
Target Start/End: Original strand, 10123 - 10154
Alignment:
Q  111 cttactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||||    
T  10123 cttactcccccttttgtcatcaacaaaaagta 10154  T

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Target: scaffold0080 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 142
Target Start/End: Original strand, 120 - 151
Alignment:
Q  111 cttactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||||    
T  120 cttactcccccttttgtcatcaacaaaaagta 151  T

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Target: scaffold0073 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 142
Target Start/End: Original strand, 59283 - 59314
Alignment:
Q  111 cttactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||||    
T  59283 cttactcccccttttgtcatcaacaaaaagta 59314  T

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Target: scaffold0752 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 142
Target Start/End: Original strand, 2831 - 2861
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaagta 142  Q
    |||||||||||||||||||||||||||||||    
T  2831 ttactcccccttttgtcatcaacaaaaagta 2861  T

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Target: scaffold0203 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 143
Target Start/End: Complemental strand, 23420 - 23390
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaa 143  Q
    |||||||||||||||||||||||||||||||    
T  23420 tactcccccttttgtcatcaacaaaaagtaa 23390  T

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Target: scaffold0151 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 143
Target Start/End: Original strand, 12215 - 12245
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaa 143  Q
    |||||||||||||||||||||||||||||||    
T  12215 tactcccccttttgtcatcaacaaaaagtaa 12245  T

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Target: scaffold1948 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1948
Description:

Target: scaffold1948; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Original strand, 238 - 267
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  238 tactcccccttttgtcatcaacaaaaagta 267  T

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Target: scaffold1260 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1260
Description:

Target: scaffold1260; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Complemental strand, 2117 - 2088
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  2117 tactcccccttttgtcatcaacaaaaagta 2088  T

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Target: scaffold0607 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Original strand, 7729 - 7758
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  7729 tactcccccttttgtcatcaacaaaaagta 7758  T

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Target: scaffold0414 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Complemental strand, 6434 - 6405
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  6434 tactcccccttttgtcatcaacaaaaagta 6405  T

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Target: scaffold0315 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Original strand, 18723 - 18752
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  18723 tactcccccttttgtcatcaacaaaaagta 18752  T

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Target: scaffold0207 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Original strand, 21454 - 21483
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  21454 tactcccccttttgtcatcaacaaaaagta 21483  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Complemental strand, 34109 - 34080
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  34109 tactcccccttttgtcatcaacaaaaagta 34080  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 142
Target Start/End: Complemental strand, 134691 - 134662
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagta 142  Q
    ||||||||||||||||||||||||||||||    
T  134691 tactcccccttttgtcatcaacaaaaagta 134662  T

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Target: scaffold1216 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1216
Description:

Target: scaffold1216; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 20 - 48
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  20 ttactcccccttttgtcatcaacaaaaag 48  T

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Target: scaffold0670 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 3476 - 3440
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  3476 tactctcccttttgtcatcaacaaaaagtaaataaaa 3440  T

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Target: scaffold0382 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 139
Target Start/End: Complemental strand, 10575 - 10547
Alignment:
Q  111 cttactcccccttttgtcatcaacaaaaa 139  Q
    |||||||||||||||||||||||||||||    
T  10575 cttactcccccttttgtcatcaacaaaaa 10547  T

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Target: scaffold0199 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 23555 - 23583
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  23555 ttactcccccttttgtcatcaacaaaaag 23583  T

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Target: scaffold0133 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 32057 - 32085
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  32057 ttactcccccttttgtcatcaacaaaaag 32085  T

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Target: scaffold0105 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 46904 - 46876
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  46904 ttactcccccttttgtcatcaacaaaaag 46876  T

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Target: scaffold0063 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 15862 - 15898
Alignment:
Q  113 tactcccccttttgtcatcaacaaaaagtaattaaaa 149  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  15862 tactcccccttttgtcatcaacaaaaaataaataaaa 15898  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 62029 - 62057
Alignment:
Q  112 ttactcccccttttgtcatcaacaaaaag 140  Q
    |||||||||||||||||||||||||||||    
T  62029 ttactcccccttttgtcatcaacaaaaag 62057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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