View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10786_14 (Length: 344)
Name: NF10786_14
Description: NF10786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10786_14 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 16 - 344
Target Start/End: Complemental strand, 31688551 - 31688223
Alignment:
| Q |
16 |
ataggacaatttgctgaaacttagtgcaacaatggcttatttgagtttcttctttgacggcatcaatgagctttgagaaacctcggaggcttccttgtat |
115 |
Q |
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| T |
31688551 |
ataggacaatttgctgaaacttagtgcaacaatggcttatttgagtttcttctttgacggcatcaatgagctttgagaaacctcggaggcttccttgtat |
31688452 |
T |
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| Q |
116 |
tgaatatcattagataaatttgataaactattacaataatctacttcaatggctccataagtaaataaaattgtaaatatcctacatcactccaacaaac |
215 |
Q |
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| T |
31688451 |
tgaatatcattagataaatttgataaactattacaataatctacttcaatggctccataagtaaataaaattgtaaatatcctacatcactccaacaaac |
31688352 |
T |
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| Q |
216 |
aatcagaagcacatttatccaaattaaatttaaaatacgttaaaatatatcaataagttaaatattgaattcactctattaagcacaccaaatagaataa |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31688351 |
aatcagaagcacatttatccaaattaaatttaaaatacgttaaaatatatcaataagttaaatattgaattcactctattaagcacaccaaatagaataa |
31688252 |
T |
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| Q |
316 |
agagcgatacctttaaaattctatcaatt |
344 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
31688251 |
agagcgatacctttaaaattctatcaatt |
31688223 |
T |
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