View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10788_1 (Length: 547)
Name: NF10788_1
Description: NF10788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10788_1 |
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Alignment Details
Target: chr7 (Bit Score: 529; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 529; E-Value: 0
Query Start/End: Original strand, 1 - 537
Target Start/End: Original strand, 45308573 - 45309109
Alignment:
| Q |
1 |
gaaacatttataacagacaatttattgtccattaaaattcatctcacaaaagcaacacaaataactattatcttcataaaactgaagttcaacatgcatt |
100 |
Q |
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| T |
45308573 |
gaaacatttataacagacaatttattgtccattaaaattcatctcacaaaagcaacacaaataactattatcttcataaaactgaagttcaacatgcatt |
45308672 |
T |
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| Q |
101 |
gtttttctattatcgtacccgcgcaaaactatataagaaaggaaacttatccttgttgtaattatctatctatttttctcttgaactgatttcattatat |
200 |
Q |
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| T |
45308673 |
gtttttctattatcgtacccgcgcaaaactatataagaaaggaaacttatccttgttgtaattatctatctatttttctcttgaactgatttcattatat |
45308772 |
T |
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| Q |
201 |
aatcatcacagatagaaataaaagattgtaacatactaagatatatataatgaaaactaaaacattgctagtctcgtcctttttcctcatcttgattatt |
300 |
Q |
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| T |
45308773 |
aatcatcacagatagaaataatagtttgtaacatactaagatatatataatgaaaactaaaacattgctagtctcgtcctttttcctcatcttgattatt |
45308872 |
T |
|
| Q |
301 |
aatattacttttggtattgtccacagtgataatttcaatgagtttagaatccctaataaggttgtcaagtccttatgcaaagacactgatgaccataaac |
400 |
Q |
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| T |
45308873 |
aatattacttttggtattgtccacagtgataatttcaatgagtttagaatccctaataaggttgtcaagtccttatgcaaagacactgatgaccataaac |
45308972 |
T |
|
| Q |
401 |
tttgccatgatgtcctctaccccgtgaaaacctcaaacccaatagattatattgatgttgtggtgaagaacttgatggaaagcgtagaaaacgcatttaa |
500 |
Q |
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| T |
45308973 |
tttgccatgatgtcctctaccccgtgaaaacctcaaacccaatagattatattgatgttgtggtgaagaacttgatggaaagcgtagaaaacgcatttaa |
45309072 |
T |
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| Q |
501 |
tgacatgagtaataaacttagttctatggagaataat |
537 |
Q |
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| T |
45309073 |
tgacatgagtaataaacttagttctatggagaataat |
45309109 |
T |
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