View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10789_3 (Length: 690)

Name: NF10789_3
Description: NF10789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10789_3
NF10789_3
[»] scaffold0234 (4 HSPs)
scaffold0234 (462-669)||(2321-2528)
scaffold0234 (462-669)||(11212-11419)
scaffold0234 (370-426)||(2564-2620)
scaffold0234 (370-426)||(11455-11511)
[»] chr4 (63 HSPs)
chr4 (462-669)||(19926760-19926967)
chr4 (165-371)||(7142831-7143037)
chr4 (462-669)||(26970463-26970670)
chr4 (462-669)||(55612683-55612890)
chr4 (462-669)||(5707320-5707527)
chr4 (462-669)||(26963640-26963847)
chr4 (462-669)||(5713948-5714155)
chr4 (462-669)||(10621333-10621540)
chr4 (462-669)||(868597-868804)
chr4 (462-669)||(10628412-10628619)
chr4 (464-669)||(18262214-18262419)
chr4 (464-669)||(28393134-28393339)
chr4 (464-669)||(4426604-4426808)
chr4 (482-669)||(18269093-18269280)
chr4 (474-669)||(8845215-8845410)
chr4 (474-669)||(8858179-8858374)
chr4 (462-577)||(12357136-12357251)
chr4 (471-669)||(20311300-20311499)
chr4 (20-121)||(7142689-7142793)
chr4 (474-669)||(10677555-10677747)
chr4 (474-669)||(10891195-10891387)
chr4 (471-669)||(5668125-5668324)
chr4 (464-668)||(5616215-5616421)
chr4 (471-669)||(35223579-35223767)
chr4 (20-371)||(5160528-5160891)
chr4 (278-371)||(4841722-4841815)
chr4 (165-371)||(5182929-5183132)
chr4 (221-371)||(5214548-5214695)
chr4 (165-367)||(4856223-4856422)
chr4 (20-124)||(5214330-5214434)
chr4 (370-426)||(5713856-5713912)
chr4 (370-426)||(19927003-19927059)
chr4 (370-426)||(26963548-26963604)
chr4 (370-426)||(26970371-26970427)
chr4 (368-426)||(5707226-5707284)
chr4 (278-371)||(5196445-5196538)
chr4 (370-426)||(10621576-10621632)
chr4 (370-426)||(12357044-12357100)
chr4 (372-426)||(868507-868561)
chr4 (369-426)||(55612593-55612650)
chr4 (370-426)||(10628655-10628711)
chr4 (370-426)||(17142372-17142428)
chr4 (369-424)||(28393380-28393435)
chr4 (488-669)||(21454137-21454319)
chr4 (73-138)||(5196226-5196291)
chr4 (370-426)||(4426847-4426903)
chr4 (72-124)||(4841989-4842041)
chr4 (370-426)||(18268976-18269032)
chr4 (511-578)||(39074278-39074346)
chr4 (73-132)||(5182820-5182879)
chr4 (73-138)||(4856466-4856531)
chr4 (165-313)||(5173597-5173742)
chr4 (500-661)||(56516094-56516255)
chr4 (385-426)||(5668371-5668412)
chr4 (377-426)||(55992680-55992729)
chr4 (72-124)||(5173481-5173533)
chr4 (386-426)||(18262136-18262176)
chr4 (599-651)||(39074218-39074270)
chr4 (512-571)||(11161913-11161972)
chr4 (372-426)||(20311207-20311261)
chr4 (500-668)||(30040750-30040919)
chr4 (385-426)||(8845125-8845166)
chr4 (385-426)||(8858089-8858130)
[»] chr1 (26 HSPs)
chr1 (462-669)||(18252030-18252237)
chr1 (462-669)||(18532514-18532721)
chr1 (462-669)||(27131409-27131616)
chr1 (464-669)||(21171233-21171438)
chr1 (464-669)||(27310577-27310782)
chr1 (464-669)||(16359035-16359240)
chr1 (471-669)||(36816633-36816831)
chr1 (462-669)||(3855919-3856126)
chr1 (462-669)||(22657221-22657429)
chr1 (471-669)||(27277557-27277753)
chr1 (496-669)||(12006539-12006712)
chr1 (496-669)||(12014284-12014457)
chr1 (474-669)||(9917918-9918106)
chr1 (370-426)||(18251936-18251992)
chr1 (370-426)||(18532757-18532813)
chr1 (368-426)||(27310821-27310879)
chr1 (368-426)||(16359280-16359338)
chr1 (370-426)||(21171479-21171535)
chr1 (370-422)||(22657469-22657521)
chr1 (474-537)||(30720625-30720688)
chr1 (492-569)||(3403248-3403325)
chr1 (492-569)||(3443494-3443571)
chr1 (378-423)||(36816881-36816926)
chr1 (370-426)||(3856164-3856220)
chr1 (369-426)||(27131652-27131705)
chr1 (370-426)||(27277800-27277856)
[»] chr7 (27 HSPs)
chr7 (462-669)||(29327784-29327991)
chr7 (462-669)||(11536062-11536269)
chr7 (462-669)||(11542980-11543187)
chr7 (464-669)||(15152445-15152650)
chr7 (464-669)||(15148144-15148349)
chr7 (464-669)||(18561009-18561214)
chr7 (464-669)||(12750828-12751033)
chr7 (471-665)||(12738545-12738739)
chr7 (464-669)||(18257842-18258047)
chr7 (471-650)||(13392160-13392338)
chr7 (484-669)||(2364917-2365101)
chr7 (495-654)||(7396221-7396381)
chr7 (471-652)||(39111822-39112002)
chr7 (370-426)||(2653275-2653331)
chr7 (370-426)||(11543223-11543279)
chr7 (370-426)||(12738443-12738499)
chr7 (370-426)||(11536305-11536361)
chr7 (370-426)||(12750733-12750789)
chr7 (370-426)||(15152350-15152406)
chr7 (370-425)||(29327690-29327745)
chr7 (370-426)||(15148049-15148105)
chr7 (536-579)||(3132748-3132791)
chr7 (512-577)||(10234179-10234244)
chr7 (370-425)||(13392030-13392085)
chr7 (369-426)||(18258087-18258144)
chr7 (462-494)||(2653207-2653239)
chr7 (370-426)||(18560913-18560969)
[»] chr3 (53 HSPs)
chr3 (462-669)||(6110064-6110271)
chr3 (462-669)||(10572592-10572799)
chr3 (471-669)||(17781118-17781316)
chr3 (464-669)||(16482483-16482688)
chr3 (462-669)||(15600884-15601091)
chr3 (462-669)||(15607429-15607636)
chr3 (464-669)||(18522665-18522870)
chr3 (465-669)||(13211305-13211509)
chr3 (462-669)||(13248607-13248814)
chr3 (462-669)||(15357586-15357793)
chr3 (471-669)||(10579355-10579553)
chr3 (464-669)||(18519980-18520182)
chr3 (471-669)||(19089745-19089943)
chr3 (462-669)||(8490488-8490702)
chr3 (481-669)||(15342219-15342407)
chr3 (464-669)||(17200184-17200389)
chr3 (464-669)||(13516813-13517018)
chr3 (471-669)||(32056900-32057098)
chr3 (462-623)||(18640792-18640953)
chr3 (471-669)||(1647521-1647723)
chr3 (482-650)||(16200145-16200313)
chr3 (462-654)||(29924971-29925163)
chr3 (462-654)||(29974124-29974316)
chr3 (482-650)||(16200451-16200619)
chr3 (471-669)||(24253388-24253587)
chr3 (568-669)||(17136465-17136566)
chr3 (464-526)||(18534758-18534820)
chr3 (369-426)||(8490395-8490452)
chr3 (370-426)||(6109972-6110028)
chr3 (370-426)||(13248515-13248571)
chr3 (368-426)||(18640989-18641047)
chr3 (370-426)||(13211211-13211267)
chr3 (370-426)||(17136137-17136193)
chr3 (369-420)||(10579603-10579654)
chr3 (370-426)||(15607672-15607729)
chr3 (369-426)||(16482727-16482783)
chr3 (464-509)||(18510924-18510969)
chr3 (370-426)||(15351237-15351293)
chr3 (370-426)||(15357829-15357885)
chr3 (370-426)||(17200427-17200483)
chr3 (370-426)||(18519885-18519941)
chr3 (370-420)||(10572840-10572890)
chr3 (370-426)||(15601127-15601184)
chr3 (370-426)||(1647768-1647824)
chr3 (370-426)||(13516719-13516775)
chr3 (370-426)||(17781358-17781414)
chr3 (370-426)||(19089985-19090041)
chr3 (370-426)||(32057144-32057200)
chr3 (370-426)||(18510829-18510885)
chr3 (370-426)||(18522570-18522626)
chr3 (378-426)||(18534671-18534719)
chr3 (370-426)||(29924879-29924935)
chr3 (370-426)||(29974032-29974088)
[»] scaffold0390 (4 HSPs)
scaffold0390 (462-669)||(6934-7141)
scaffold0390 (462-669)||(13950-14157)
scaffold0390 (369-426)||(14193-14250)
scaffold0390 (370-426)||(7177-7233)
[»] chr8 (18 HSPs)
chr8 (462-669)||(21940665-21940872)
chr8 (464-669)||(22171491-22171694)
chr8 (471-669)||(6094132-6094330)
chr8 (464-663)||(28554885-28555084)
chr8 (471-669)||(24642658-24642856)
chr8 (471-595)||(24636863-24636987)
chr8 (474-666)||(38232380-38232570)
chr8 (369-426)||(21940572-21940629)
chr8 (370-426)||(22070108-22070164)
chr8 (368-426)||(6094029-6094087)
chr8 (492-653)||(32872857-32873019)
chr8 (370-426)||(22171396-22171452)
chr8 (370-422)||(24642556-24642608)
chr8 (370-426)||(28554791-28554847)
chr8 (483-666)||(2375027-2375208)
chr8 (500-563)||(10920234-10920297)
chr8 (369-407)||(24636604-24636642)
chr8 (558-669)||(14983920-14984030)
[»] chr6 (30 HSPs)
chr6 (462-669)||(29308890-29309097)
chr6 (462-669)||(29315850-29316057)
chr6 (464-669)||(16566320-16566525)
chr6 (462-669)||(27381252-27381459)
chr6 (462-669)||(27471635-27471842)
chr6 (464-669)||(17684469-17684674)
chr6 (462-669)||(17691440-17691647)
chr6 (464-669)||(188977-189182)
chr6 (464-669)||(25537159-25537364)
chr6 (464-669)||(11651725-11651930)
chr6 (464-669)||(13359269-13359474)
chr6 (501-669)||(20553587-20553755)
chr6 (485-669)||(27925772-27925961)
chr6 (481-654)||(8509941-8510115)
chr6 (372-426)||(17691683-17691737)
chr6 (500-669)||(17850495-17850663)
chr6 (370-426)||(27381495-27381551)
chr6 (370-426)||(27471878-27471934)
chr6 (370-426)||(29308798-29308854)
chr6 (370-426)||(29315758-29315814)
chr6 (368-424)||(11651628-11651684)
chr6 (370-426)||(17684712-17684768)
chr6 (500-668)||(20736604-20736773)
chr6 (370-426)||(25537405-25537461)
chr6 (471-524)||(31258065-31258118)
chr6 (385-426)||(13359512-13359553)
chr6 (378-426)||(16566563-16566611)
chr6 (397-426)||(189221-189250)
chr6 (385-426)||(16394484-16394525)
chr6 (478-543)||(22259925-22259990)
[»] chr2 (14 HSPs)
chr2 (462-669)||(21330248-21330455)
chr2 (481-669)||(18796525-18796713)
chr2 (471-669)||(18619814-18620011)
chr2 (471-607)||(19692598-19692734)
chr2 (527-654)||(20977957-20978084)
chr2 (496-669)||(36270199-36270373)
chr2 (370-426)||(21330493-21330549)
chr2 (496-669)||(18822115-18822290)
chr2 (370-426)||(19692773-19692829)
chr2 (498-653)||(36802664-36802820)
chr2 (582-669)||(12098618-12098705)
chr2 (582-669)||(18852059-18852146)
chr2 (504-654)||(24471643-24471792)
chr2 (600-669)||(22183483-22183552)
[»] scaffold0220 (2 HSPs)
scaffold0220 (462-669)||(18288-18495)
scaffold0220 (369-426)||(18195-18252)
[»] scaffold0433 (2 HSPs)
scaffold0433 (462-669)||(7107-7314)
scaffold0433 (370-426)||(7015-7071)
[»] chr5 (20 HSPs)
chr5 (462-669)||(24695466-24695673)
chr5 (462-669)||(18569863-18570070)
chr5 (464-669)||(19714498-19714703)
chr5 (471-669)||(19707218-19707416)
chr5 (471-650)||(27347497-27347675)
chr5 (474-669)||(22547016-22547211)
chr5 (462-571)||(39537962-39538071)
chr5 (474-647)||(17285754-17285927)
chr5 (528-669)||(18807034-18807175)
chr5 (575-667)||(39538701-39538793)
chr5 (474-647)||(17298907-17299080)
chr5 (370-426)||(24695709-24695765)
chr5 (471-571)||(31886540-31886640)
chr5 (369-426)||(19714742-19714799)
chr5 (368-426)||(27347722-27347780)
chr5 (370-426)||(19707462-19707518)
chr5 (488-578)||(33477389-33477479)
chr5 (385-426)||(18570108-18570149)
chr5 (370-425)||(39537870-39537925)
chr5 (512-580)||(11479420-11479489)
[»] scaffold0657 (2 HSPs)
scaffold0657 (462-669)||(993-1200)
scaffold0657 (370-426)||(901-957)
[»] scaffold0186 (2 HSPs)
scaffold0186 (462-669)||(25990-26197)
scaffold0186 (370-425)||(26231-26286)
[»] scaffold0063 (2 HSPs)
scaffold0063 (464-669)||(5531-5736)
scaffold0063 (378-426)||(5444-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (464-645)||(230365-230545)
scaffold0008 (368-426)||(230584-230642)
[»] scaffold0176 (2 HSPs)
scaffold0176 (462-526)||(8446-8510)
scaffold0176 (370-426)||(8546-8602)
[»] scaffold0203 (1 HSPs)
scaffold0203 (370-426)||(23769-23825)
[»] scaffold0326 (1 HSPs)
scaffold0326 (370-426)||(16523-16579)
[»] scaffold0637 (1 HSPs)
scaffold0637 (368-426)||(8942-9000)
[»] scaffold0705 (1 HSPs)
scaffold0705 (370-426)||(41-97)
[»] scaffold0170 (1 HSPs)
scaffold0170 (370-422)||(5878-5930)
[»] scaffold0565 (2 HSPs)
scaffold0565 (372-426)||(10202-10256)
scaffold0565 (481-512)||(10127-10158)
[»] scaffold0767 (1 HSPs)
scaffold0767 (369-406)||(1-38)
[»] scaffold0032 (1 HSPs)
scaffold0032 (491-563)||(92194-92267)


Alignment Details
Target: scaffold0234 (Bit Score: 204; Significance: 1e-111; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 2528 - 2321
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 2329  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  2328 ctgatgat 2321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 11419 - 11212
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11220  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  11219 ctgatgat 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 2620 - 2564
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2620 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 11511 - 11455
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11511 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 19926967 - 19926760
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 19926768  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  19926767 ctgatgat 19926760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 165 - 371
Target Start/End: Original strand, 7142831 - 7143037
Alignment:
Q  165 ctagttcaattgggatgttttcaaacctgctagcccttcgtatggatgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctat 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7142831 ctagttcaattgggatgttttcaaacctgctagcccttcgtatggttgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctat 7142930  T
Q  265 tcttgaatatattgatctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgat 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7142931 tcttgaatatattgatctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgat 7143030  T
Q  365 ctctctg 371  Q
    |||||||    
T  7143031 ctctctg 7143037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 26970463 - 26970670
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26970662  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  26970663 ctgatgat 26970670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 55612683 - 55612890
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 55612882  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  55612883 ctgatgat 55612890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 5707320 - 5707527
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5707519  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  5707520 ctgatgat 5707527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 26963640 - 26963847
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26963839  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  26963840 ctgatgat 26963847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 5713948 - 5714155
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5714147  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  5714148 ctgatgat 5714155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 10621540 - 10621333
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10621341  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  10621340 ctgatgat 10621333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 868597 - 868804
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 868796  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  868797 ctgatgat 868804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 10628619 - 10628412
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtaga 10628420  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  10628419 ctgatgat 10628412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 464 - 669
Target Start/End: Original strand, 18262214 - 18262419
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18262413  T
Q  664 gatgat 669  Q
    ||||||    
T  18262414 gatgat 18262419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 464 - 669
Target Start/End: Complemental strand, 28393339 - 28393134
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 28393140  T
Q  664 gatgat 669  Q
    ||||||    
T  28393139 gatgat 28393134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 464 - 669
Target Start/End: Complemental strand, 4426808 - 4426604
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4426708 cccgttaaacataagg-aactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 4426610  T
Q  664 gatgat 669  Q
    ||||||    
T  4426609 gatgat 4426604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 482 - 669
Target Start/End: Original strand, 18269093 - 18269280
Alignment:
Q  482 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa 581  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18269093 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaa 18269192  T
Q  582 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269193 actattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 18269280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 474 - 669
Target Start/End: Original strand, 8845215 - 8845410
Alignment:
Q  474 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  574 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8845410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 474 - 669
Target Start/End: Original strand, 8858179 - 8858374
Alignment:
Q  474 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 573  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  574 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8858374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 462 - 577
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  562 accccattaaacataa 577  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 471 - 669
Target Start/End: Original strand, 20311300 - 20311499
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaag-tataacttaattgtgagaccccatt 569  Q
    |||||||||||||||||||||||| ||||||||||||| | || |||||||| |  ||| |||||| ||||||| |||||||||||||||||||||||||    
T  20311300 ttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccatt 20311399  T
Q  570 aaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    ||||||||||| ||| || | |||||||  || |||||||||||||| |||||| |||||||||||||||||||||||||| ||| |||||| |||||||    
T  20311400 aaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtagattgatgat 20311499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 7142689 - 7142793
Alignment:
Q  20 actttctaagtggtaatattcctaaattttatatttcaat---gtatttgaaaactttatttctcaataataacaactttagtggaacactggaagatgt 116  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||  |||||||||||||||||||||||||||| |||||||||||||||||||    
T  7142689 actttctaagtggtaatattcctaaattttatatttcaataatgtatttgggaactttatttctcaataataacaactttggtggaacactggaagatgt 7142788  T
Q  117 atttg 121  Q
    |||||    
T  7142789 atttg 7142793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 474 - 669
Target Start/End: Complemental strand, 10677747 - 10677555
Alignment:
Q  474 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 573  Q
    |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||||||||    
T  10677747 tttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-cccattaaac 10677649  T
Q  574 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
      || || | |||||| |||||||||||||||||||||||  | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||||    
T  10677648 gaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagactgatgat 10677555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 474 - 669
Target Start/End: Complemental strand, 10891387 - 10891195
Alignment:
Q  474 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 573  Q
    |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||||||||    
T  10891387 tttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-cccattaaac 10891289  T
Q  574 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
      || || | |||||| |||||||||||||||||||||||  | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||||    
T  10891288 gaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagactgatgat 10891195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 471 - 669
Target Start/End: Complemental strand, 5668324 - 5668125
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||| |||||||| | | ||||| |||||| |||||||    
T  5668324 ttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-cccatta 5668226  T
Q  571 aacataaggaaactattctcaaag--tatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 668  Q
    ||   ||||| | |||||| ||||  |||  ||||||||||||||||| |||  | |||| ||||||| ||||||||||||||||| | ||||| |||||    
T  5668225 aatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgtggatagaccgatga 5668126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 464 - 668
Target Start/End: Original strand, 5616215 - 5616421
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||  |||  ||||||||||||| | ||| |||  |||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaa--gctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||| ||||||   |||| | |||||| ||||||||||| |||||  | ||||||  ||| |||||||| | |||||||| |||||||||||||| |||||    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatattaataaagcattgagactattatgtatgtaga 5616414  T
Q  662 ctgatga 668  Q
     ||||||    
T  5616415 ttgatga 5616421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 471 - 669
Target Start/End: Original strand, 35223579 - 35223767
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||| | |||||||          | | |    
T  35223579 ttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat----------cgtaa 35223668  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    |||  ||||| | |||||| ||||||| ||||||||||||||||||  ||   ||||| |||||||||||| |||||||||||| ||||||| ||||||    
T  35223669 aacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagacggatgat 35223767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 20 - 371
Target Start/End: Original strand, 5160528 - 5160891
Alignment:
Q  20 actttctaagtggtaatattcctaaattttatatttcaatgtatttgaaaactttatttctcaataataacaactttagtggaacactggaagatgtatt 119  Q
    |||||||||||||||||||||| ||||||| || || |  |    |||||| ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  5160528 actttctaagtggtaatattcccaaattttgtaatttaggga---tgaaaaatttatttcttaataataacaactttagtggaacacttgaagatgtatt 5160624  T
Q  120 tggaagcaatacaatattatatttgttgtccatatccaa-----------------caatatctagttcaattgggatgttttcaaacctgctagccctt 202  Q
     |||| |||||||  ||||   ||  | |||||||||||                 ||||  ||||||||||||||| |||||| ||| ||  || ||||    
T  5160625 gggaaacaatacagaattagcatttctatccatatccaataattcattctcaggcacaattcctagttcaattgggacgttttctaacatggaagtcctt 5160724  T
Q  203 cgtatggatgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctattcttgaatatattg-atctttct-caaaacaagttaat 300  Q
       |||  ||||||||| ||||||||||||||||| |||| |   ||||| |||||||  | ||||||| || ||| |||||||| |||||||||||||     
T  5160725 atcatgtctgaaaatctattagaaggtgagatccctattgag---ttttccaacatgttcagtcttgaa-atgttggatctttcttcaaaacaagttaaa 5160820  T
Q  301 tggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgatctctctg 371  Q
    |||||||||||||  ||||||||||||||    ||||| | ||||||||||||||||||||||||||||||    
T  5160821 tggatcaatcccacctttaagtagtttgacttctctaaagttcttgtatttgcaaaagaatgatctctctg 5160891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 4841815 - 4841722
Alignment:
Q  278 gatctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgatctctctg 371  Q
    ||||||||||||||||||||||||||| |||||||| | || |||||||| ||| |||||||| |||||||||||||| |||||||||||||||    
T  4841815 gatctttctcaaaacaagttaattggagcaatcccaaagttgagtagttttaaatatctaaggttcttgtatttgcaacagaatgatctctctg 4841722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 165 - 371
Target Start/End: Original strand, 5182929 - 5183132
Alignment:
Q  165 ctagttcaattgggatgttttcaaacctgctagcccttcgtatggatgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctat 264  Q
    ||||||||||||||||||||||  |  ||| || ||||| ||||   | |||||| ||||||||||||||||| |||| |||   ||| |||||| | ||    
T  5182929 ctagttcaattgggatgttttctgatatgcaagtccttcttatgtccggaaatctattagaaggtgagatccctattgagat---ttccaacatggccat 5183025  T
Q  265 tcttgaatatattg-atctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatga 363  Q
    |||| || || ||| ||||||||||||||||||||| |||||| |||||| | || |||||||||| |  ||||||| |||||||||||||| |||||||    
T  5183026 tcttcaa-atgttggatctttctcaaaacaagttaaatggatcgatcccaaagttcagtagtttgacatctctaaggttcttgtatttgcaatagaatga 5183124  T
Q  364 tctctctg 371  Q
    ||||||||    
T  5183125 tctctctg 5183132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 221 - 371
Target Start/End: Original strand, 5214548 - 5214695
Alignment:
Q  221 ttagaaggtgagatcccaattgggatgttttcaaacatgtctattcttgaatatattgatctttctcaaaacaagttaattggatcaatcccagatttaa 320  Q
    ||||||||||||||||| |||| |||   ||| |||||||| | |||| ||  | | |||||||||||||||||||||||||||||||||||| | ||||    
T  5214548 ttagaaggtgagatccctattgagat---ttccaacatgtcaagtcttaaaattctggatctttctcaaaacaagttaattggatcaatcccaaagttaa 5214644  T
Q  321 gtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgatctctctg 371  Q
    || |||||| |  ||| ||| |||||||||||||||||||| |||||||||    
T  5214645 gtggtttgacagttcttaggttcttgtatttgcaaaagaataatctctctg 5214695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 165 - 367
Target Start/End: Complemental strand, 4856422 - 4856223
Alignment:
Q  165 ctagttcaattgggatgttttcaaacctgctagcccttcgtatggatgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctat 264  Q
    ||||||||||||||| |||||| ||| || |  |||||  ||||  ||||||||  ||||||||||||||||| |||| |||   ||| |||||||| |     
T  4856422 ctagttcaattgggaagttttctaacatggtttcccttgttatgtctgaaaatcaattagaaggtgagatccctattgagat---ttccaacatgtccag 4856326  T
Q  265 tcttgaatatattg-atctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatga 363  Q
    |||| | ||| ||| |||||||||||||||||||| ||||| |||||||| | |||||| |||||| |  ||| ||| |||||||||||||||||||| |    
T  4856325 tcttta-tattttggatctttctcaaaacaagttagttggagcaatcccaaagttaagtggtttgacagttcttaggttcttgtatttgcaaaagaataa 4856227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 5214330 - 5214434
Alignment:
Q  20 actttctaagtggtaatattcctaaattttatatttcaatgtatttgaaaactttatttctcaataataacaactttagtggaacactggaagatgtatt 119  Q
    ||||||||  ||| || |||||||||||||||| ||| ||| || || ||  |||||||||||||||||||||||||||||||||||| |||||||||||    
T  5214330 actttctacatgggaacattcctaaattttataattccatgaatgtggaatttttatttctcaataataacaactttagtggaacacttgaagatgtatt 5214429  T
Q  120 tggaa 124  Q
     ||||    
T  5214430 gggaa 5214434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 5713856 - 5713912
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5713856 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 19927059 - 19927003
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19927059 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 26963548 - 26963604
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26963548 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 26970371 - 26970427
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26970371 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 368 - 426
Target Start/End: Original strand, 5707226 - 5707284
Alignment:
Q  368 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  5707226 tctgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 5196445 - 5196538
Alignment:
Q  278 gatctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgatctctctg 371  Q
    |||||||||||||||||||||| |||||||||||||  ||||||| ||||||    ||||||| |||||||||||||| |||||| ||||||||    
T  5196445 gatctttctcaaaacaagttaaatggatcaatcccacctttaagtggtttgactcttctaaggttcttgtatttgcaagagaatggtctctctg 5196538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 10621632 - 10621576
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  10621632 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 372 - 426
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  372 ttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 55612593 - 55612650
Alignment:
Q  369 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  55612593 ctgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 17142428 - 17142372
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  17142428 tgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 369 - 424
Target Start/End: Complemental strand, 28393435 - 28393380
Alignment:
Q  369 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatca 424  Q
    |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||    
T  28393435 ctgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 669
Target Start/End: Complemental strand, 21454319 - 21454137
Alignment:
Q  488 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt-aagtataacttaattgtgagaccccattaaacataaggaaactat 586  Q
    ||||||||||| ||||||||| | |||||||||||||  | ||||||||||||| || | | |||||||  ||||||||||||||  |||| || | |||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  587 tctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    | | ||| ||||  ||||||| |||||||| ||| || |||| || ||| ||||| ||| ||||||||  ||||| |||||||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgtgagtagattgatgat 21454137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 5196226 - 5196291
Alignment:
Q  73 ttatttctcaataataacaactttagtggaacactggaagatgtatttggaagcaatacaatatta 138  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||||    
T  5196226 ttatttcttaataataacaactttagtggaacacttgaagatgtattaggaaataatacaagatta 5196291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 4426903 - 4426847
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||| | |||||||||||||||||||||||||||||||| |||||||||    
T  4426903 tgttggagtaagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 4842041 - 4841989
Alignment:
Q  72 tttatttctcaataataacaactttagtggaacactggaagatgtatttggaa 124  Q
    |||||||||||||||||||||||||||||||||||| || |||||||| ||||    
T  4842041 tttatttctcaataataacaactttagtggaacacttgatgatgtattgggaa 4841989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 18268976 - 18269032
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||||||||  |||||||||||||| |||| |||||||||||||||||||||    
T  18268976 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 511 - 578
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  511 ctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataag 578  Q
    |||||||| ||||||||||||| | ||||||||||||| |||||||  |||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 5182820 - 5182879
Alignment:
Q  73 ttatttctcaataataacaactttagtggaacactggaagatgtatttggaagcaataca 132  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| | || |||||||    
T  5182820 ttatttcttaataataacaactttagtggaacacttgaagatgtattggaaaacaataca 5182879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 4856531 - 4856466
Alignment:
Q  73 ttatttctcaataataacaactttagtggaacactggaagatgtatttggaagcaatacaatatta 138  Q
    ||||| |||| |||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||||    
T  4856531 ttattgctcagtaataacaactttagtggaacacttgaagatgtattgggaaataatacaagatta 4856466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 165 - 313
Target Start/End: Original strand, 5173597 - 5173742
Alignment:
Q  165 ctagttcaattgggatgttttcaaacctgctagcccttcgtatggatgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctat 264  Q
    |||||||||||||||||||||| ||| ||   | ||||| ||||  | ||||||  ||||||||| ||||||| |||| |||   ||| |||||||| |     
T  5173597 ctagttcaattgggatgttttctaacatgtatgtccttcttatgtctaaaaatcaattagaaggtcagatccctattgagat---ttccaacatgtccag 5173693  T
Q  265 tcttgaatatattg-atctttctcaaaacaagttaattggatcaatccca 313  Q
    |||| | ||| ||| |||||||||||||||||||||||||| ||||||||    
T  5173694 tcttta-tattttggatctttctcaaaacaagttaattggagcaatccca 5173742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 500 - 661
Target Start/End: Original strand, 56516094 - 56516255
Alignment:
Q  500 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa-actattctcaaagtatc 598  Q
    ||||||||||| |||||||| | ||  |  ||||| |||||||| | | |||||||||||||||  |||||| ||||  ||| | ||||||  |||||||    
T  56516094 taataaagtccttagaatagatggttagagtaatgaaacattaattgtgacttaattgtgagacttcattaa-catatagaacattattcttgaagtatc 56516192  T
Q  599 cgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
      |||||||||||||||| |||    ||||  |||||| ||||||||||||||||||||||||    
T  56516193 tatagtcaagctttattgtgaataacgatagtattaaaacatagagactattatgtaggtaga 56516255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  385 taatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 426
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  377 ataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| ||||||||||| | ||||||||||||||| ||||||||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 5173481 - 5173533
Alignment:
Q  72 tttatttctcaataataacaactttagtggaacactggaagatgtatttggaa 124  Q
    |||||| || |||||||||||||||||||||||||| || |||||||| ||||    
T  5173481 tttattactgaataataacaactttagtggaacacttgatgatgtattgggaa 5173533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  386 aatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 599 - 651
Target Start/End: Complemental strand, 39074270 - 39074218
Alignment:
Q  599 cgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatta 651  Q
    ||||||||  |||||||| |||||| |||||||||||||||| ||||||||||    
T  39074270 cgtagtcatactttattgtgaagtgagatatcattaaagcatggagactatta 39074218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 512 - 571
Target Start/End: Complemental strand, 11161972 - 11161913
Alignment:
Q  512 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaa 571  Q
    ||||||||||| || |||||||||||||  |||| | ||||||||||||||| |||||||    
T  11161972 tagaatagttaatcagtttaatggaacacaaagtgtgacttaattgtgagactccattaa 11161913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 426
Target Start/End: Original strand, 20311207 - 20311261
Alignment:
Q  372 ttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||| |||||  ||||||||||||| |||| ||||| |||||||||||||||||    
T  20311207 ttggagtaagctgtaatagccaatctgtattcattggatttggctttgtatcatg 20311261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 500 - 668
Target Start/End: Complemental strand, 30040919 - 30040750
Alignment:
Q  500 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa-actattctcaaa-gtat 597  Q
    ||||||||| |||||||||| |||| ||| |||| | | ||||||| | |||||||  |||||   |||||| ||||| ||| |||||||| ||| ||||    
T  30040919 taataaagttcctagaatagatagttcgtgtaatagtatattaagtgtgacttaatcatgagattacattaa-cataaagaacactattcttaaatgtat 30040821  T
Q  598 ccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 668  Q
    |  ||||||||| ||| |  ||| |||||||  | |||||||| ||||||||||||||  |||||||||||    
T  30040820 ctatagtcaagcgttaatatgaattgggataataataaagcatcgagactattatgtatatagactgatga 30040750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 8845125 - 8845166
Alignment:
Q  385 taatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||    
T  8845125 taatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 8858089 - 8858130
Alignment:
Q  385 taatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||    
T  8858089 taatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 18252030 - 18252237
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18252229  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  18252230 ctgatgat 18252237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 18532721 - 18532514
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagataga 18532522  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  18532521 ctgatgat 18532514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 27131616 - 27131409
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 27131417  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  27131416 ctgatgat 27131409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 464 - 669
Target Start/End: Complemental strand, 21171438 - 21171233
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 21171239  T
Q  664 gatgat 669  Q
    ||||||    
T  21171238 gatgat 21171233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 464 - 669
Target Start/End: Complemental strand, 27310782 - 27310577
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    | | || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagact 27310583  T
Q  664 gatgat 669  Q
    ||||||    
T  27310582 gatgat 27310577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 464 - 669
Target Start/End: Complemental strand, 16359240 - 16359035
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||| |||||||||||||||||||||| |||||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagact 16359041  T
Q  664 gatgat 669  Q
    ||||||    
T  16359040 gatgat 16359035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 471 - 669
Target Start/End: Complemental strand, 36816831 - 36816633
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| || |||    
T  36816831 ttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccgtta 36816732  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    |||||||||| | |||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  36816731 aacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgtggatagactgatgat 36816633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 3856126 - 3855919
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||| || |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||| | |||||| ||| |||  |||||||| |||||||| |||||||||||| |||||||||| |||||||||| || ||||||    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtaga 3855927  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  3855926 ctgatgat 3855919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 22657429 - 22657221
Alignment:
Q  462 acaaggcaattctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtga 560  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  561 gaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtag 660  Q
    |||||| ||||||||||||| || ||||| ||||| ||  |||||||||||||||  ||| || ||||||||||||||||||||||||| |||| | |||    
T  22657329 gacccctttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgtggatag 22657230  T
Q  661 actgatgat 669  Q
    |||||||||    
T  22657229 actgatgat 22657221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 471 - 669
Target Start/End: Complemental strand, 27277753 - 27277557
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||| ||||| || | ||||||| | ||||||   |||    
T  27277753 ttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatta-gtgtgacttaatcgcgagacctt-tta 27277656  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    | |  || || | |||||| |||||||||||||||| ||||||||| |||  |||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  27277655 accgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagaccgatgat 27277557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 496 - 669
Target Start/End: Complemental strand, 12006712 - 12006539
Alignment:
Q  496 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 595  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||| |  |||||| |||||||||||| ||||||||||| | |||| | |||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  596 atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    || ||||||||||| ||| || |||| |||||| ||||||| | |||||| | ||||||   ||||||||||||    
T  12006612 attcgtagtcaagccttagtgtgaagagggataacattaaaacttagagattgttatgtgcatagactgatgat 12006539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 496 - 669
Target Start/End: Complemental strand, 12014457 - 12014284
Alignment:
Q  496 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 595  Q
    |||||||||||||| ||||||||  ||||||||||||||||| ||||||| ||| ||||| || ||| |||||||||||||| ||   |||||| |||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  596 atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    ||||||||| |||||||| || |||| ||||||  |||||||| || |||| ||||||| |||||| |||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtagaatgatgat 12014284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 474 - 669
Target Start/End: Complemental strand, 9918106 - 9917918
Alignment:
Q  474 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 573  Q
    |||||||||||||||||||| ||||||||||||||| ||       |||||  ||||||| |||||||||||||||||| ||   ||||  ||||||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgaga-tccattaaat 9918014  T
Q  574 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    ||||||| | |||||| ||| ||||  |||| |||||||||||  |||||||||| |||| ||||||||||| || ||||| |||||  |||||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtaggttgatgat 9917918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 18251936 - 18251992
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18251936 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 18532813 - 18532757
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18532813 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 368 - 426
Target Start/End: Complemental strand, 27310879 - 27310821
Alignment:
Q  368 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27310879 tctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 368 - 426
Target Start/End: Complemental strand, 16359338 - 16359280
Alignment:
Q  368 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||| |||||| ||||||||||||||||||||||||||| || |||||||||||    
T  16359338 tctgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 21171535 - 21171479
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||  ||||||||||||||||| ||||| ||||||||||||||||||    
T  21171535 tgttggagtaagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 22657521 - 22657469
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtat 422  Q
    ||||||| |||||| ||||||||||| ||||||||||| ||||||||||||||    
T  22657521 tgttggagtaagccttaatagccaatatatattgattgagtttggctttgtat 22657469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 474 - 537
Target Start/End: Complemental strand, 30720688 - 30720625
Alignment:
Q  474 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaa 537  Q
    ||||||| |||| |||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||    
T  30720688 tttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 569
Target Start/End: Original strand, 3403248 - 3403325
Alignment:
Q  492 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 569  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 569
Target Start/End: Complemental strand, 3443571 - 3443494
Alignment:
Q  492 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 569  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 378 - 423
Target Start/End: Complemental strand, 36816926 - 36816881
Alignment:
Q  378 taagccataatagccaatctatattgattgggtttggctttgtatc 423  Q
    |||||| |||||  ||||||||||||||||||||||||||||||||    
T  36816926 taagccctaatattcaatctatattgattgggtttggctttgtatc 36816881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 3856220 - 3856164
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| || ||| |||||||||||| || ||||||||||||| ||||||||||||    
T  3856220 tgttggagtaggccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 27131705 - 27131652
Alignment:
Q  369 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||||||||| |||||||||||||||     ||||||||||||||||||||||    
T  27131705 ctgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 27277856 - 27277800
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| ||||||||||||||| || |||  ||||| ||||||||||||    
T  27277856 tgttggagtaagccctaatagccaatctatgttaattatgtttgactttgtatcatg 27277800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 29327784 - 29327991
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29327983  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  29327984 ctgatgat 29327991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 11536269 - 11536062
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11536070  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  11536069 ctgatgat 11536062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 11543187 - 11542980
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11542988  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  11542987 ctgatgat 11542980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 464 - 669
Target Start/End: Original strand, 15152445 - 15152650
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15152644  T
Q  664 gatgat 669  Q
    ||||||    
T  15152645 gatgat 15152650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 464 - 669
Target Start/End: Original strand, 15148144 - 15148349
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15148343  T
Q  664 gatgat 669  Q
    ||||||    
T  15148344 gatgat 15148349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 464 - 669
Target Start/End: Original strand, 18561009 - 18561214
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||| |||||||| ||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagact 18561208  T
Q  664 gatgat 669  Q
    ||||||    
T  18561209 gatgat 18561214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 464 - 669
Target Start/End: Original strand, 12750828 - 12751033
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    | | |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgtggatagact 12751027  T
Q  664 gatgat 669  Q
    ||||||    
T  12751028 gatgat 12751033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 471 - 665
Target Start/End: Original strand, 12738545 - 12738739
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||   |||    
T  12738545 ttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttgtta 12738644  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 665  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12738645 aacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactga 12738739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 464 - 669
Target Start/End: Complemental strand, 18258047 - 18257842
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||||||||||| ||||| | |||||| |||||||||||||||||| ||| |||  |||| ||||| || ||| ||||| |||||||||||| | |||| |    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgtggatagatt 18257848  T
Q  664 gatgat 669  Q
    ||||||    
T  18257847 gatgat 18257842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 471 - 650
Target Start/End: Original strand, 13392160 - 13392338
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||| | |||||| | |||||||| |||||||| | ||||||| |||||| |||||||    
T  13392160 ttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-cccatta 13392258  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 650  Q
    ||   ||||| | |||||| ||||||||  ||||||| |||||||| |||  |||||| ||||||| |||||||||||||    
T  13392259 aatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 484 - 669
Target Start/End: Original strand, 2364917 - 2365101
Alignment:
Q  484 ttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaac 583  Q
    ||||| |||||||||||||||||||| |||||||| ||||||  | |||||||||||||||| |  |||||| |||||| ||||||||||  || || |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  584 tattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    |||||| ||| ||| ||||||||| | |||||| ||| || |||| ||||||| |||||||||||| |||| ||| ||||||||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgtgggtcgactgatgat 2365101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 495 - 654
Target Start/End: Original strand, 7396221 - 7396381
Alignment:
Q  495 caaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 593  Q
    |||||||| || ||| |||||||||||||| | ||||| ||||||||||||||| |||||||  |||||||| |||||||||||| ||| |||||| |||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  594 gtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 654  Q
      ||  |||||||||| ||| || ||| |  |||   ||||||||||||||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgt 7396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 471 - 652
Target Start/End: Original strand, 39111822 - 39112002
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||||  ||||||||||||| |||||||||||  |||||||    ||||  | |||    
T  39111822 ttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaatcacaagacatcttta 39111920  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattat 652  Q
    |||||||||| ||||||   ||| ||| |  |||| |||||||||| |||  |  ||| |||||||  ||||||||||||||    
T  39111921 aacataaggacactatttcaaaaatattcacagtccagctttattgtgaaacgaaataacattaaaatatagagactattat 39112002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 2653331 - 2653275
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  2653331 tgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 11543279 - 11543223
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  11543279 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 12738443 - 12738499
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12738443 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 11536361 - 11536305
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  11536361 tgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 12750733 - 12750789
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  12750733 tgttggagtaagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 15152350 - 15152406
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  15152350 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 370 - 425
Target Start/End: Original strand, 29327690 - 29327745
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcat 425  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  29327690 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 15148049 - 15148105
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  15148049 tgttggagtaagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 536 - 579
Target Start/End: Original strand, 3132748 - 3132791
Alignment:
Q  536 aacattaagtataacttaattgtgagaccccattaaacataagg 579  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataagg 3132791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 512 - 577
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  512 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 577  Q
    ||||||||||||||||||||||| | |||||| |||||||||||  |||||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 370 - 425
Target Start/End: Original strand, 13392030 - 13392085
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcat 425  Q
    ||||||| |||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  13392030 tgttggagtaagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 18258144 - 18258087
Alignment:
Q  369 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||| |||||| | |||||||||||| ||||||||| |||||| ||||||||||    
T  18258144 ctgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 462 - 494
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  462 acaaggcaattctttattgattttgttttgttt 494  Q
    |||||||| ||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 18560913 - 18560969
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| | | || |||||||| ||||||||| ||||||||||||||||    
T  18560913 tgttggagtaagcccttaaaggcaatctatgttgattgggcttggctttgtatcatg 18560969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 6110064 - 6110271
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6110263  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  6110264 ctgatgat 6110271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 10572799 - 10572592
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10572600  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  10572599 ctgatgat 10572592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 471 - 669
Target Start/End: Complemental strand, 17781316 - 17781118
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781316 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 17781217  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781216 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 17781118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 464 - 669
Target Start/End: Complemental strand, 16482688 - 16482483
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16482489  T
Q  664 gatgat 669  Q
    ||||||    
T  16482488 gatgat 16482483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 15601091 - 15600884
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15600892  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  15600891 ctgatgat 15600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 15607636 - 15607429
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15607437  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  15607436 ctgatgat 15607429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 464 - 669
Target Start/End: Original strand, 18522665 - 18522870
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagact 18522864  T
Q  664 gatgat 669  Q
    ||||||    
T  18522865 gatgat 18522870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 465 - 669
Target Start/End: Original strand, 13211305 - 13211509
Alignment:
Q  465 aggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 564  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  565 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 664  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactg 13211504  T
Q  665 atgat 669  Q
    |||||    
T  13211505 atgat 13211509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 13248607 - 13248814
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtaga 13248806  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  13248807 ctgatgat 13248814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 15357793 - 15357586
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtaga 15357594  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  15357593 ctgatgat 15357586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 471 - 669
Target Start/End: Complemental strand, 10579553 - 10579355
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10579553 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagaccccatta 10579454  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10579453 aacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactgatgat 10579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 464 - 669
Target Start/End: Original strand, 18519980 - 18520182
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||| |||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520080 cccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18520176  T
Q  664 gatgat 669  Q
    ||||||    
T  18520177 gatgat 18520182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 471 - 669
Target Start/End: Complemental strand, 19089943 - 19089745
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  19089943 ttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagaccccttta 19089844  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19089843 aacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagactgatgat 19089745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 8490488 - 8490702
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagact-------attatgt 654  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||       |||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactacagacgattatgt 8490687  T
Q  655 aggtagactgatgat 669  Q
    |||||||||||||||    
T  8490688 aggtagactgatgat 8490702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 481 - 669
Target Start/End: Complemental strand, 15342407 - 15342219
Alignment:
Q  481 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 580  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  581 aactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagactgatgat 15342219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 464 - 669
Target Start/End: Complemental strand, 17200389 - 17200184
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||| |||||||||| ||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagact 17200190  T
Q  664 gatgat 669  Q
    ||||||    
T  17200189 gatgat 17200184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 464 - 669
Target Start/End: Original strand, 13516813 - 13517018
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||| |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagact 13517012  T
Q  664 gatgat 669  Q
    ||||||    
T  13517013 gatgat 13517018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 471 - 669
Target Start/End: Complemental strand, 32057098 - 32056900
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||| |||    
T  32057098 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccgtta 32056999  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    ||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  32056998 aacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactaatgat 32056900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 462 - 623
Target Start/End: Complemental strand, 18640953 - 18640792
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 471 - 669
Target Start/End: Complemental strand, 1647723 - 1647521
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataa----cttaattgtgagacccc 566  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    |||||||||||||||||    
T  1647723 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagacccc 1647624  T
Q  567 attaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 666  Q
     |||||||||||||||||||| | |||||||||||| |||||||||||||||||  ||||||| |||||||||||||||||||||||| | |||||||||    
T  1647623 gttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgtggatagactgat 1647524  T
Q  667 gat 669  Q
    |||    
T  1647523 gat 1647521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 482 - 650
Target Start/End: Original strand, 16200145 - 16200313
Alignment:
Q  482 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa 581  Q
    |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  16200145 ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagaccccattaaacataaggac 16200244  T
Q  582 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 650  Q
    | |||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  16200245 attattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 462 - 654
Target Start/End: Original strand, 29924971 - 29925163
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 654  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 462 - 654
Target Start/End: Original strand, 29974124 - 29974316
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 654  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 482 - 650
Target Start/End: Original strand, 16200451 - 16200619
Alignment:
Q  482 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa 581  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||     
T  16200451 ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagactccaataaacataaggac 16200550  T
Q  582 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 650  Q
    | |||||| ||||||| |||||||||| ||||||| |||||||||| ||||||||||||  ||||||||    
T  16200551 attattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 471 - 669
Target Start/End: Complemental strand, 24253587 - 24253388
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccatt 569  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||| | || ||||| |||||||||||||||| ||||||| |||||| ||||||     
T  24253587 ttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatccccatc 24253488  T
Q  570 aaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    ||||||||||| |||||||| |||||||  || |||||  |||||||  ||||| | || ||||||||||||||||||||||||| |||||||| |||||    
T  24253487 aaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagactaatgat 24253388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 568 - 669
Target Start/End: Original strand, 17136465 - 17136566
Alignment:
Q  568 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 667  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagactgatg 17136564  T
Q  668 at 669  Q
    ||    
T  17136565 at 17136566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 464 - 526
Target Start/End: Original strand, 18534758 - 18534820
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 526  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtcc 18534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 8490395 - 8490452
Alignment:
Q  369 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8490395 ctgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 6109972 - 6110028
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6109972 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 13248515 - 13248571
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13248515 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 368 - 426
Target Start/End: Complemental strand, 18641047 - 18640989
Alignment:
Q  368 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  18641047 tctgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 13211211 - 13211267
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  13211211 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 17136137 - 17136193
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  17136137 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 369 - 420
Target Start/End: Complemental strand, 10579654 - 10579603
Alignment:
Q  369 ctgttggaataagccataatagccaatctatattgattgggtttggctttgt 420  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  10579654 ctgttggaataagccctaatagccaatctatattgattgggtttgactttgt 10579603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 15607729 - 15607672
Alignment:
Q  370 tgttggaataagccataatagccaatctata-ttgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||||||||    
T  15607729 tgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 16482783 - 16482727
Alignment:
Q  369 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  16482783 ctgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 464 - 509
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtc 509  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 15351293 - 15351237
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||    
T  15351293 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 15357885 - 15357829
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||    
T  15357885 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 17200483 - 17200427
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  17200483 tgttggagtaagccctaatagccaatctatgttgattgggtttggctttgtagcatg 17200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 18519885 - 18519941
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||| | |||||||||||||||||||||||||||||| |||||||||||    
T  18519885 tgttggagtaagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 10572890 - 10572840
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgt 420  Q
    |||||||||||||| |||||||||| |||||||||||||||||| ||||||    
T  10572890 tgttggaataagccctaatagccaacctatattgattgggtttgactttgt 10572840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 15601184 - 15601127
Alignment:
Q  370 tgttggaataagccataatagccaatctata-ttgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||| || ||||||||||| |||||||||||    
T  15601184 tgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 1647824 - 1647768
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| |||||||   ||||||||||||||||||||||||||||||||    
T  1647824 tgttggagtaagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 13516719 - 13516775
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| ||||||||||||||| ||||||| |||||||| |||||||||    
T  13516719 tgttggagtaagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 17781414 - 17781358
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||| ||| |||||||    
T  17781414 tgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 17781358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 19090041 - 19089985
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||| ||| |||||||    
T  19090041 tgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 19089985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 32057200 - 32057144
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||  ||||||||||||||| ||||||||||||| ||||||||||||    
T  32057200 tgttggagtaagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 18510829 - 18510885
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| ||||| ||||||||||||||||| |||||  |||||||||||    
T  18510829 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 18522570 - 18522626
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| ||||| ||||||||||||||||| |||||  |||||||||||    
T  18522570 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 18534671 - 18534719
Alignment:
Q  378 taagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||| |||||| |||||||||||||||| |||||| |||||||||||    
T  18534671 taagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 29924879 - 29924935
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| |||||| | |||||||||||||| ||||| | ||||||||||    
T  29924879 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 29974032 - 29974088
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| |||||| | |||||||||||||| ||||| | ||||||||||    
T  29974032 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29974088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 196; Significance: 1e-106; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 7141 - 6934
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6942  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  6941 ctgatgat 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 14157 - 13950
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 13958  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  13957 ctgatgat 13950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 14250 - 14193
Alignment:
Q  369 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  14250 ctgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 7233 - 7177
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  7233 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 196; Significance: 1e-106; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 21940665 - 21940872
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 21940864  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  21940865 ctgatgat 21940872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 464 - 669
Target Start/End: Original strand, 22171491 - 22171694
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagact 22171688  T
Q  664 gatgat 669  Q
    ||||||    
T  22171689 gatgat 22171694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 471 - 669
Target Start/End: Original strand, 6094132 - 6094330
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6094132 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgtta 6094231  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||    
T  6094232 aacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtagagtgatgat 6094330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 464 - 663
Target Start/End: Original strand, 28554885 - 28555084
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| ||||||||||||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 28555084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 471 - 669
Target Start/End: Original strand, 24642658 - 24642856
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  24642658 ttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccgtta 24642757  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||    
T  24642758 aacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagactgatgat 24642856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 471 - 595
Target Start/End: Original strand, 24636863 - 24636987
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  24636863 ttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccgtta 24636962  T
Q  571 aacataaggaaactattctcaaagt 595  Q
    ||||||||||||||||||| |||||    
T  24636963 aacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 474 - 666
Target Start/End: Complemental strand, 38232570 - 38232380
Alignment:
Q  474 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 573  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||  |   ||| ||||||||||||  ||| || |||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  574 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 666  Q
     |||  | | |||||| |||||||  |||||||| ||||||||  ||||| ||||   |||||||||| | |||||| ||| |||||||||||    
T  38232471 gtaa-aatagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagactgat 38232380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 21940572 - 21940629
Alignment:
Q  369 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  21940572 ctgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 22070108 - 22070164
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  22070108 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 368 - 426
Target Start/End: Original strand, 6094029 - 6094087
Alignment:
Q  368 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  6094029 tctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 492 - 653
Target Start/End: Complemental strand, 32873019 - 32872857
Alignment:
Q  492 tttcaaaataataaagtccctagaatagttagtccgttta-atggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctc 590  Q
    ||||||||||||||||||| || |||||||  ||| |||| || ||||||||||||| |||||||||||||| | |||| || | |  || | || | |     
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgagatctcattgaaaagagtgacaatactatt 32872920  T
Q  591 aaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatg 653  Q
    ||| |||  ||||| ||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  32872919 aaaatatttgtagttaagatttattgtgaagtgggataacatcaaagcatagagactattatg 32872857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 22171396 - 22171452
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  22171396 tgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 24642556 - 24642608
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtat 422  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  24642556 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtat 24642608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 28554791 - 28554847
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  28554791 tgttggagtaagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 483 - 666
Target Start/End: Original strand, 2375027 - 2375208
Alignment:
Q  483 tttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaa 582  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  |||||||||||||| |  || |||||||  ||| | ||||||||||||| | | |    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatttatgatgacttaatcatga-aacccattaaacatacgaata 2375125  T
Q  583 ctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 666  Q
     |||| | |||||||  ||||||| | ||||||| | |||| |||| |||||||| |||   ||||||| || |||||| ||||    
T  2375126 ttatttttaaagtatatgtagtcacgatttattgcg-agtgagataacattaaagtatatgaactattaagtgggtagattgat 2375208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 500 - 563
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  500 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    ||||||| | ||||||||| |||||| ||||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 369 - 407
Target Start/End: Original strand, 24636604 - 24636642
Alignment:
Q  369 ctgttggaataagccataatagccaatctatattgattg 407  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  24636604 ctgttggagtaagccataatagccaatctatattgattg 24636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 669
Target Start/End: Complemental strand, 14984030 - 14983920
Alignment:
Q  558 tgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtagg 657  Q
    |||||||| |||||||   |||| | |||||| ||||||||  || ||||  ||||||| ||||||||||| |||| ||| |||| ||||||||||| ||    
T  14984030 tgagacccaattaaactataggacattattcttaaagtatctataatcaaaatttattgtgaagtgggataacatt-aagaatagggactattatgtggg 14983932  T
Q  658 tagactgatgat 669  Q
    |||||| |||||    
T  14983931 tagactaatgat 14983920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 196; Significance: 1e-106; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 29308890 - 29309097
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29309089  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  29309090 ctgatgat 29309097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 29315850 - 29316057
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29316049  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  29316050 ctgatgat 29316057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 464 - 669
Target Start/End: Complemental strand, 16566525 - 16566320
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16566326  T
Q  664 gatgat 669  Q
    ||||||    
T  16566325 gatgat 16566320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 27381459 - 27381252
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27381260  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  27381259 ctgatgat 27381252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 27471842 - 27471635
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27471643  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  27471642 ctgatgat 27471635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 464 - 669
Target Start/End: Complemental strand, 17684674 - 17684469
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 17684475  T
Q  664 gatgat 669  Q
    ||||||    
T  17684474 gatgat 17684469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 17691647 - 17691440
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtaga 17691448  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  17691447 ctgatgat 17691440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 464 - 669
Target Start/End: Complemental strand, 189182 - 188977
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 188983  T
Q  664 gatgat 669  Q
    ||||||    
T  188982 gatgat 188977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 464 - 669
Target Start/End: Complemental strand, 25537364 - 25537159
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagact 25537165  T
Q  664 gatgat 669  Q
    ||||||    
T  25537164 gatgat 25537159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 464 - 669
Target Start/End: Original strand, 11651725 - 11651930
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 11651924  T
Q  664 gatgat 669  Q
    ||||||    
T  11651925 gatgat 11651930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 464 - 669
Target Start/End: Complemental strand, 13359474 - 13359269
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
     |||||||||||||  | | |||| | ||||||||||||||||| |||||||| ||| ||||| | ||||||||| ||||||||||||| | | ||||||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattatatggatagact 13359275  T
Q  664 gatgat 669  Q
    ||||||    
T  13359274 gatgat 13359269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 501 - 669
Target Start/End: Complemental strand, 20553755 - 20553587
Alignment:
Q  501 aataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccg 600  Q
    ||||||||| |||| |||| |||||||||||||| || ||||||||  ||||||| |||||| ||||||||| ||||| | | |||||| |||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  601 tagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    |||| ||  ||||||| |||||| ||||  ||||||||||| ||| | |||||| ||||||||||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagactgatgat 20553587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 485 - 669
Target Start/End: Original strand, 27925772 - 27925961
Alignment:
Q  485 tgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacat---taagtata--acttaattgtgagaccccattaaacataagg 579  Q
    |||||||||||||||||||||||||| |||||||  ||||  |||||| |||||||   ||||| |   ||||||| ||||||| |||||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  580 aaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    ||| |||||| ||||||||  ||||||| |||||||  ||||||| ||| |||| ||||| | |||||||||||| | || |||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgtggataaactgatgat 27925961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 481 - 654
Target Start/End: Original strand, 8509941 - 8510115
Alignment:
Q  481 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccattaaacataagg 579  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||  ||| ||||||||||| |||  |||||||| ||||| |||||||||| || |||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  580 aaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 654  Q
    |   |||| | |||||||  ||||| ||||||||||  ||| || |||| ||||||| |||| ||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgt 8510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 372 - 426
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  372 ttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 500 - 669
Target Start/End: Complemental strand, 17850663 - 17850495
Alignment:
Q  500 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatcc 599  Q
    |||||||||||||| ||||| ||||  ||||  |||||||||| |||  |||||||||||| | || |||||| | ||||| |||||||| ||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  600 gtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
     |||||||||||| ||| |||||   ||| |||| ||| ||| |||||||||| | ||||||||||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagactgatgat 17850495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 27381551 - 27381495
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  27381551 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27381495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 27471934 - 27471878
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  27471934 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 29308798 - 29308854
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  29308798 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 29315758 - 29315814
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  29315758 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 11651628 - 11651684
Alignment:
Q  368 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatca 424  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  11651628 tctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 17684768 - 17684712
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  17684768 tgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 500 - 668
Target Start/End: Complemental strand, 20736773 - 20736604
Alignment:
Q  500 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa-actattctcaaa-gtat 597  Q
    ||||||||| |||||||||| |||| ||| |||||| | ||||||| | |||||||  |||||   |||||| ||||| ||| | |||||| ||| ||||    
T  20736773 taataaagttcctagaatagatagttcgtgtaatggtatattaagtttgacttaatcatgagattacattaa-cataaagaacattattcttaaatgtat 20736675  T
Q  598 ccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 668  Q
    | |||||||||||||| | |||| |||||||  | |||||| | |||||||||||||| ||||||||||||    
T  20736674 ctgtagtcaagctttaataagaactgggataataataaagcgtcgagactattatgtatgtagactgatga 20736604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 25537461 - 25537405
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||    
T  25537461 tgttggattaagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 471 - 524
Target Start/End: Complemental strand, 31258118 - 31258065
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 524  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258118 ttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 13359553 - 13359512
Alignment:
Q  385 taatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  13359553 taatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 426
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  378 taagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||| ||||||||||||||| ||||||| ||||| ||||||||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 426
Target Start/End: Complemental strand, 189250 - 189221
Alignment:
Q  397 tatattgattgggtttggctttgtatcatg 426  Q
    ||||||||||||||||||||||||||||||    
T  189250 tatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 16394525 - 16394484
Alignment:
Q  385 taatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||| |||||||||||||||| ||||| ||||||||||||    
T  16394525 taatagacaatctatattgattgagtttgactttgtatcatg 16394484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 543
Target Start/End: Complemental strand, 22259990 - 22259925
Alignment:
Q  478 ttgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaa 543  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||| ||||||  ||||||||    
T  22259990 ttgattttgttatgttgcaaaataataaactccctaaaataactagtccatttaatataacattaa 22259925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 21330455 - 21330248
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtgga 21330256  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  21330255 ctgatgat 21330248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 481 - 669
Target Start/End: Original strand, 18796525 - 18796713
Alignment:
Q  481 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 580  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  18796525 attttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacctcttttaacataagga 18796624  T
Q  581 aactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
     | |||||| ||| |||| ||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| ||||||||||||||    
T  18796625 tattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtagactgatgat 18796713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 471 - 669
Target Start/End: Original strand, 18619814 - 18620011
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||| ||||| |||||||    
T  18619814 ttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga-cccatta 18619912  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    |||| ||||| | |||||| |||||||| || ||||| |||||||| |||  ||||||  ||||||||||| |||||||||||| ||||| | ||||||    
T  18619913 aacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtaggccgatgat 18620011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 471 - 607
Target Start/End: Complemental strand, 19692734 - 19692598
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||  | |||||||  ||||| | |||||    
T  19692734 ttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctcatta 19692635  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaa 607  Q
    |||  ||||||| |||||| ||||||||| |||||||    
T  19692634 aactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 527 - 654
Target Start/End: Original strand, 20977957 - 20978084
Alignment:
Q  527 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtggga 626  Q
    |||||||||||||||||| |||| |||||  ||||| ||||||||| ||||||||| |||||| |||  |||||||||||||||||| || |||||| ||    
T  20977957 gtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgaga 20978056  T
Q  627 tatcattaaagcatagagactattatgt 654  Q
    ||||| ||||||||||||||||||||||    
T  20978057 tatcactaaagcatagagactattatgt 20978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 496 - 669
Target Start/End: Original strand, 36270199 - 36270373
Alignment:
Q  496 aaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaag 594  Q
    |||||||||||||||||||||||||||||    |||| || ||  |||||| | ||||||| |||||||  ||||||||| || || |||||||| |||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  595 tatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
     ||||||| |||||||||| || |||| |||||| |||||||| ||| |||||||| ||| ||||||||||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagactgatgat 36270373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 21330549 - 21330493
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21330549 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 496 - 669
Target Start/End: Original strand, 18822115 - 18822290
Alignment:
Q  496 aaaataataaagtccctagaatagttagtccgtttaa-tggaaca-ttaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 593  Q
    ||||||||||||||  |||||| |||||| ||||||| ||||| | |||||| |  |||||| ||||||| |||||||||| ||||| |||||||| |||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  594 gtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
      ||  ||| |||||||||| |  |||||||||||||||||||||| | ||| ||||||||   ||||||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgtcaatagactgatgat 18822290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 19692829 - 19692773
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| ||||||||||||| |||| ||| ||||||| |||||||||||    
T  19692829 tgttggagtaagccttaatagccaatctgtatttattaggtttggttttgtatcatg 19692773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 498 - 653
Target Start/End: Complemental strand, 36802820 - 36802664
Alignment:
Q  498 aataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagta 596  Q
    ||||||||||||| | ||||||||| | ||||||| ||||| ||||| | | |||||||||  |||   ||||||||| || || | |||||| |||  |    
T  36802820 aataataaagtcctttgaatagttaattcgtttaaatggaatattaaatgttacttaattgcaagatatcattaaacacaatgacattattcttaaaaca 36802721  T
Q  597 tccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatg 653  Q
    |||||| ||||| || | ||  |||||||||| |||||||||||| ||| |||||||    
T  36802720 tccgtaatcaagattcagtgtaaagtgggataacattaaagcatatagattattatg 36802664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 582 - 669
Target Start/End: Complemental strand, 12098705 - 12098618
Alignment:
Q  582 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    |||||| | ||||||| |||||||||| |||| |  ||| | |||||  | |||| |||||||||||||||||| |||||||||||||    
T  12098705 actatttttaaagtattcgtagtcaagttttaatatgaaattggatagtaataaaacatagagactattatgtatgtagactgatgat 12098618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 582 - 669
Target Start/End: Complemental strand, 18852146 - 18852059
Alignment:
Q  582 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    |||||||| |||||||  |||||| | |||||||| ||||| ||||| |||||||   || |||||||||||| |||||||| |||||    
T  18852146 actattcttaaagtatatgtagtccaactttattgtgaagtaggataacattaaattgtatagactattatgtcggtagactaatgat 18852059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 504 - 654
Target Start/End: Complemental strand, 24471792 - 24471643
Alignment:
Q  504 aaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtag 603  Q
    |||||||||| |||| |||||| ||||||| |  ||||| || | |||||||||||||||  ||||  ||||||| | | ||||||  |||||||| ||     
T  24471792 aaagtccctaaaatatttagtcggtttaatagc-cattatgtgtgacttaattgtgagacatcatttgacataagaacattattctttaagtatccatac 24471694  T
Q  604 tcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 654  Q
     ||| || ||||   |||||||||| || ||||||||| ||||||||||||    
T  24471693 acaaactctattttaaagtgggataacactaaagcataaagactattatgt 24471643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 600 - 669
Target Start/End: Complemental strand, 22183552 - 22183483
Alignment:
Q  600 gtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    |||||||||||||| || |||   ||||| |||||||| ||||||||||||| || |||||| |||||||    
T  22183552 gtagtcaagctttagtgtgaaaatggataacattaaagtatagagactattacgtgggtagattgatgat 22183483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 18288 - 18495
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18487  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  18488 ctgatgat 18495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 18195 - 18252
Alignment:
Q  369 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18195 ctgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 188; Significance: 1e-101; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 7107 - 7314
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 7306  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  7307 ctgatgat 7314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 7015 - 7071
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  7015 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-101; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 24695673 - 24695466
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtaga 24695474  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  24695473 ctgatgat 24695466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 18570070 - 18569863
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtaga 18569871  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  18569870 ctgatgat 18569863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 464 - 669
Target Start/End: Complemental strand, 19714703 - 19714498
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||| |||||||||||||| ||||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagact 19714504  T
Q  664 gatgat 669  Q
    ||||||    
T  19714503 gatgat 19714498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 471 - 669
Target Start/End: Complemental strand, 19707416 - 19707218
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  19707416 ttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccgtta 19707317  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    ||||||||||| ||||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  19707316 aacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagactgatgat 19707218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 471 - 650
Target Start/End: Complemental strand, 27347675 - 27347497
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||| ||| || |||||||||| |||||||| | ||||||| |||||| |||||||    
T  27347675 ttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-cccatta 27347577  T
Q  571 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 650  Q
    |||  ||||| | |||||| |||||||  ||||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  27347576 aacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactatt 27347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 474 - 669
Target Start/End: Complemental strand, 22547211 - 22547016
Alignment:
Q  474 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 573  Q
    |||||| |||||||||| ||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||     
T  22547211 tttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctcattaaat 22547112  T
Q  574 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    ||| ||| | |||| | ||||||| || |||||| |||||||| |||||| |||| |||||||  |||||||||||||||| | ||||| ||||||    
T  22547111 atatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgtggatagaccgatgat 22547016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 462 - 571
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    ||||| || ||||||| ||||||||||||||||||||||  | |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  562 accccattaa 571  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 474 - 647
Target Start/End: Complemental strand, 17285927 - 17285754
Alignment:
Q  474 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 573  Q
    ||||||||||||||| ||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||| | ||||||| |||| |||| | |||||    
T  17285927 tttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccctagtaaac 17285828  T
Q  574 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagact 647  Q
      || || | |||||| ||||||| | ||||| | |||||||| ||| |||||||  ||||||||||| |||||    
T  17285827 taaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 528 - 669
Target Start/End: Complemental strand, 18807175 - 18807034
Alignment:
Q  528 tttaatggaacattaagtataacttaattgtgagaccccattaaacataa-ggaaactattctcaaagtatccgtagtcaagctttattgagaagtggga 626  Q
    |||||||||||||||||| | ||||||| ||||||| |||||||| |||| ||| | |||||| ||||||||  ||||||||| |||||| |||||  ||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  627 tatcattaaagcatagagactattatgtaggtagactgatgat 669  Q
    || || |||||||||||||||||||||  ||||||||||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagactgatgat 18807034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 575 - 667
Target Start/End: Original strand, 39538701 - 39538793
Alignment:
Q  575 taaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 667  Q
    |||||| |||||||| ||| ||||| |||| ||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  39538701 taaggacactattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagactgatg 39538793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 474 - 647
Target Start/End: Complemental strand, 17299080 - 17298907
Alignment:
Q  474 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 573  Q
    ||||||||||||||| |||||  |||||||||  |||  ||||||||||||||| |||||||||||||||||   ||||||| |||| |||| | |||||    
T  17299080 tttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccctagtaaac 17298981  T
Q  574 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagact 647  Q
      || || | |||||| ||||||| | ||||| | ||||||||  ||||||||||  ||||||||||| |||||    
T  17298980 taaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 24695765 - 24695709
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24695765 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 471 - 571
Target Start/End: Original strand, 31886540 - 31886640
Alignment:
Q  471 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 570  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| | |||||| |||||| |||||  ||||||| ||||||| ||||||    
T  31886540 ttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactccatta 31886639  T
Q  571 a 571  Q
    |    
T  31886640 a 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 369 - 426
Target Start/End: Complemental strand, 19714799 - 19714742
Alignment:
Q  369 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19714799 ctgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 368 - 426
Target Start/End: Complemental strand, 27347780 - 27347722
Alignment:
Q  368 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27347780 tctgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 19707518 - 19707462
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  19707518 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 488 - 578
Target Start/End: Complemental strand, 33477479 - 33477389
Alignment:
Q  488 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataag 578  Q
    ||||||||||||||||||||||| || ||||||||| | | |||||||| |||||||| | |  |||| |||||||| |||||| ||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataag 33477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 18570149 - 18570108
Alignment:
Q  385 taatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||| |||||||||| |||||||||||||||||||||||    
T  18570149 taatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 370 - 425
Target Start/End: Original strand, 39537870 - 39537925
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcat 425  Q
    ||||||| |||||| ||||||||||||||| |||| || |||| ||||||||||||    
T  39537870 tgttggattaagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 580
Target Start/End: Original strand, 11479420 - 11479489
Alignment:
Q  512 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc-cattaaacataagga 580  Q
    ||||||| |||||  |||||||| || ||||||| | |||| |||||||||||| |||||||||||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataagga 11479489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 184; Significance: 3e-99; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 462 - 669
Target Start/End: Original strand, 993 - 1200
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 1192  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  1193 ctgatgat 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 901 - 957
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  901 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 180; Significance: 8e-97; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 462 - 669
Target Start/End: Complemental strand, 26197 - 25990
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 561  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  562 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 661  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtaga 25998  T
Q  662 ctgatgat 669  Q
    ||||||||    
T  25997 ctgatgat 25990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 370 - 425
Target Start/End: Complemental strand, 26286 - 26231
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcat 425  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  26286 tgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 166; Significance: 2e-88; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 464 - 669
Target Start/End: Original strand, 5531 - 5736
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 663  Q
    ||| ||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 5730  T
Q  664 gatgat 669  Q
    ||||||    
T  5731 gatgat 5736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 5444 - 5492
Alignment:
Q  378 taagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  5444 taagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 138; Significance: 9e-72; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 464 - 645
Target Start/End: Complemental strand, 230545 - 230365
Alignment:
Q  464 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 563  Q
    |||||| |||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  564 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagaga 645  Q
    ||| |||||||||||||||| ||||| |||||||  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcatagaga 230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 368 - 426
Target Start/End: Complemental strand, 230642 - 230584
Alignment:
Q  368 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  230642 tctgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 462 - 526
Target Start/End: Complemental strand, 8510 - 8446
Alignment:
Q  462 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 526  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 8602 - 8546
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  8602 tgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 23825 - 23769
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23825 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 16523 - 16579
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  16523 tgttggaataagccctaatagccaatctatattgattgggtttggctttatatcatg 16579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 368 - 426
Target Start/End: Original strand, 8942 - 9000
Alignment:
Q  368 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||||||||||||||  |||||||||||||| |||| |||||||||||||||||||||    
T  8942 tctgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 97 - 41
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    |||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||    
T  97 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 5878 - 5930
Alignment:
Q  370 tgttggaataagccataatagccaatctatattgattgggtttggctttgtat 422  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||    
T  5878 tgttggagtaagtcataatagccaatctatattgattgagtttgactttgtat 5930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 372 - 426
Target Start/End: Complemental strand, 10256 - 10202
Alignment:
Q  372 ttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 426  Q
    ||||| |||||  ||||||||||||||||||||||| ||||| ||||||||||||    
T  10256 ttggagtaagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 512
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  481 attttgttttgtttcaaaataataaagtccct 512  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 38 - 1
Alignment:
Q  369 ctgttggaataagccataatagccaatctatattgatt 406  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  38 ctgttggaataagccctaatagccaatctatattgatt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 563
Target Start/End: Original strand, 92194 - 92267
Alignment:
Q  491 gtttcaaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagac 563  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagac 92267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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