View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10789_4 (Length: 658)
Name: NF10789_4
Description: NF10789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10789_4 |
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Alignment Details
Target: chr2 (Bit Score: 603; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 603; E-Value: 0
Query Start/End: Original strand, 28 - 650
Target Start/End: Original strand, 364844 - 365466
Alignment:
| Q |
28 |
gatgacgatgataatgcagatagtagaacaatagctttatatattgtgcttttcacattgattttgccttttgtattgtacaaatatcttgattatcttc |
127 |
Q |
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| T |
364844 |
gatgacgatgataatgcagatagtagaacaatagctttatatattgtgcttttcacattgattttgccttttgtattgtacaaatatcttgattatcttc |
364943 |
T |
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| Q |
128 |
ctcaaataattaatttcttgaggagaacagaaagtaacaaggaggatgtaccattaaagaagagagttgcttatatggtagatgtatttttctccatata |
227 |
Q |
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| T |
364944 |
ctcaaataattaatttcttgaggagaacagaaagtaacaaggaggatgtaccattaaagaagagagttgcttatatggtagatgtatttttctccatata |
365043 |
T |
|
| Q |
228 |
tccttatgcaaagctacttgcacttctttgtgcaactctctttcttatagcatttggtggtttagcgttgtatgcggttactggcggtagcatggctgaa |
327 |
Q |
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| T |
365044 |
tccttatgcaaagctacttgcacttctttgtgcaactctctttcttatagcatttggtggtttagcgttgtatgcggttactggtggtagcatggctgaa |
365143 |
T |
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| Q |
328 |
gcactttggcattcttggacttatgtagctgacgcaggaaatcacgctgaaacagaaggaaccggccagagaatcgtctctgtctcaattagtgcgggtg |
427 |
Q |
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| T |
365144 |
gcactttggcattcttggacttatgtagctgacgcaggaaatcacgctgaaacagaaggaaccggccagagaatcgtctctgtctcaattagtgcgggtg |
365243 |
T |
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| Q |
428 |
gcatgcttatatttgccatgatgcttgggcttgtttcggatgctatatcagagaaggttgattcacttagaaaaggaaagagcgaggtcatcgaaagaaa |
527 |
Q |
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| T |
365244 |
gcatgcttatatttgccatgatgcttgggcttgtttcggatgctatatcagagaaggttgattcacttagaaaaggaaagagcgaagtcatcgaaagaaa |
365343 |
T |
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| Q |
528 |
ccatgtactcatccttggctggagtgacaaattggtaatcccctcattcattttcttagaaacatttagagtttttgaaattgaattagaatttgatgct |
627 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
365344 |
ccatgtactcatccttggctggagtgacaaattggtaatcccctcgttggttttcttagaaacatttagagtttttgaaattgaattagaatttgatgct |
365443 |
T |
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| Q |
628 |
caggaatttagtttatatgatga |
650 |
Q |
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| T |
365444 |
caggaatttagtttatatgatga |
365466 |
T |
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