View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10789_6 (Length: 577)
Name: NF10789_6
Description: NF10789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10789_6 |
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Alignment Details
Target: chr7 (Bit Score: 507; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 507; E-Value: 0
Query Start/End: Original strand, 1 - 541
Target Start/End: Original strand, 3283625 - 3284167
Alignment:
| Q |
1 |
agtgaggcgcaatattttagggcccgattttacccaccctcacgtttcctcggaaaatcacacatgatttcggaagtatacacattgagagtagagtgct |
100 |
Q |
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| T |
3283625 |
agtgaggcgcaatattttagggcccgattttacccaccctcacgtttcctcggaaaatcacacatgatttcggaagtatacacattgagagtagagtgct |
3283724 |
T |
|
| Q |
101 |
tgtggggatgggaaaagttgagctctaatttaaagagtattggtatcgacactcatgttctcgtgactacatctagacttttcggctatgtttgaattgg |
200 |
Q |
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| T |
3283725 |
tgtggggatgggaaaagttgagctctaatttaaagagtactggtatcgacactcatgttctcgtgactacatctagacttttcggctatgtttgaattgg |
3283824 |
T |
|
| Q |
201 |
catatggtgaaatgaagtgaaatagaataatcttgttagattttaaaaatggacatatcctatttcatttcattttataccatcaatacaaacataccat |
300 |
Q |
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| T |
3283825 |
catatggtgaaatgtagtgaaatagaataatcttgttagattttaaaaatggacatatcctatttcatttcattttataccatcaatacgaacataccat |
3283924 |
T |
|
| Q |
301 |
ttggaagtttattttttaatatatgcttttagaagatctaggtgtagtagcaagaccctaagtgttaatactagtgccctaatttgagtagtaacttgaa |
400 |
Q |
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| T |
3283925 |
ttggaagtttattttttaatatatgcttttagaagatctaggtgtagtagcaagaccctaagtgttaatactagtgccctaatttgagtagtaacttgaa |
3284024 |
T |
|
| Q |
401 |
aacaacttgtttggaagcttctcaattggcaagcaagagaaacaaaattgtctgatttagatagattctgacaagttgtt-aaacattgtaaattat-aa |
498 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |
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| T |
3284025 |
aacaacttgtttggaagcttctcaattggcaagcaggagaaacaaaattgtctgatttagatagattctgacaagttgttaaaacattgtaaattataaa |
3284124 |
T |
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| Q |
499 |
tgttatgttcctaattgttttgtttaatggtttgatgatgtta |
541 |
Q |
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| T |
3284125 |
tgttatgttcctaattgttgtgtttaatggtttgatgatgtta |
3284167 |
T |
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