View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1078_high_25 (Length: 209)
Name: NF1078_high_25
Description: NF1078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1078_high_25 |
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Alignment Details
Target: chr2 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 37658141 - 37657965
Alignment:
| Q |
16 |
caccatcactatcctttttccttgtaacacgaatgtagcaaaaaacaacagcaaaagttgcactaactaacccaccaatgatcacacctccaccagccat |
115 |
Q |
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| T |
37658141 |
caccatcactatcctttttccttgtaacacgaatgtagcaaaaaacaacagcaaaagttgcactaactaacccaccaatgatcacacctccaccagccat |
37658042 |
T |
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| Q |
116 |
ttctgacgatgaagaatgatgttttcccatccttctataatctggagccatagcgttttcttcttttgattctcttt |
192 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37658041 |
ttctgatgatgaagaatgatgttttcccatccttctataatctggagccatagcgttttcttcttttgattctcttt |
37657965 |
T |
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