View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1078_low_28 (Length: 305)
Name: NF1078_low_28
Description: NF1078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1078_low_28 |
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Alignment Details
Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 65 - 199
Target Start/End: Original strand, 50244825 - 50244959
Alignment:
| Q |
65 |
cagagagagaagtaaaaaagggactgttaaaatgtgagttcttggacgtaagagagggtgttgaagagttctttgaagttcaggtgaattcagcaatggt |
164 |
Q |
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| T |
50244825 |
cagagagagaagtaaaaaagggactgttaaaatgtgagttcttggacgtaagagagggtgttgaagagttctttgaagttcaggtgaattcagcaatggt |
50244924 |
T |
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| Q |
165 |
tttttgaggcaggccatgataattttcaaagaagg |
199 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
50244925 |
tttttgaggcaggccatgataattttcaaagaagg |
50244959 |
T |
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