View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1078_low_41 (Length: 269)
Name: NF1078_low_41
Description: NF1078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1078_low_41 |
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Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 36 - 235
Target Start/End: Complemental strand, 46795898 - 46795699
Alignment:
| Q |
36 |
aggagcagagaagctaccactgtgttgaattgtgatcttttccacacaatacctagggttttcaaccattggttccaaatgttctctttccctaataatt |
135 |
Q |
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| T |
46795898 |
aggagcagagaagctaccactgtgttgaattgtgatcttttccacacaatacctagggttttcaaccattggttccaaatgttctctttccctaataatt |
46795799 |
T |
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| Q |
136 |
tcccttcttcatcatcttcttcttcttaccctaatagtaccctttcttttctcattgacaatcctgaaaataatgattttccaaataacaatactactct |
235 |
Q |
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| T |
46795798 |
tcccttcttcatcatcttcttcttcttaccctaatagtaccctttcttttctcattgacaatcctgaaaataatgattttccaaataacaatactactct |
46795699 |
T |
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