View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10791_low_2 (Length: 464)

Name: NF10791_low_2
Description: NF10791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10791_low_2
NF10791_low_2
[»] chr4 (77 HSPs)
chr4 (261-397)||(35124347-35124483)
chr4 (259-386)||(38345823-38345949)
chr4 (262-401)||(23297399-23297535)
chr4 (262-401)||(29877600-29877739)
chr4 (266-367)||(3564185-3564286)
chr4 (259-386)||(948030-948158)
chr4 (304-401)||(52274106-52274203)
chr4 (304-396)||(28074368-28074459)
chr4 (259-398)||(43699470-43699611)
chr4 (304-401)||(48591410-48591507)
chr4 (286-397)||(41228888-41228999)
chr4 (269-393)||(1374356-1374481)
chr4 (304-397)||(7148775-7148868)
chr4 (324-397)||(17222852-17222925)
chr4 (304-399)||(896973-897068)
chr4 (289-401)||(12495630-12495744)
chr4 (258-401)||(33533885-33534028)
chr4 (261-401)||(40699316-40699460)
chr4 (259-401)||(19725251-19725393)
chr4 (304-401)||(23335645-23335742)
chr4 (286-383)||(212952-213048)
chr4 (305-401)||(4603318-4603413)
chr4 (258-385)||(42611870-42611997)
chr4 (266-401)||(15184512-15184646)
chr4 (286-401)||(46704256-46704370)
chr4 (259-373)||(8130446-8130560)
chr4 (261-402)||(35405644-35405785)
chr4 (265-401)||(7206572-7206708)
chr4 (305-386)||(27368153-27368234)
chr4 (304-401)||(36740907-36741004)
chr4 (305-386)||(39932755-39932836)
chr4 (261-401)||(47202786-47202925)
chr4 (264-395)||(18424270-18424400)
chr4 (306-401)||(55638067-55638162)
chr4 (351-401)||(22273830-22273880)
chr4 (265-399)||(42617218-42617351)
chr4 (304-401)||(488370-488467)
chr4 (304-397)||(22397295-22397388)
chr4 (334-395)||(28663606-28663667)
chr4 (261-397)||(46175969-46176104)
chr4 (261-397)||(52700534-52700669)
chr4 (304-399)||(825685-825780)
chr4 (350-401)||(18630881-18630932)
chr4 (257-386)||(32628737-32628863)
chr4 (306-401)||(46650276-46650371)
chr4 (261-331)||(34633359-34633429)
chr4 (304-397)||(2141644-2141737)
chr4 (304-397)||(15179821-15179913)
chr4 (324-397)||(35010234-35010307)
chr4 (336-401)||(36255022-36255087)
chr4 (267-331)||(3564319-3564383)
chr4 (305-397)||(22117358-22117449)
chr4 (304-399)||(8601204-8601299)
chr4 (324-391)||(21216324-21216391)
chr4 (350-401)||(39931530-39931581)
chr4 (268-397)||(2702705-2702834)
chr4 (304-382)||(3966733-3966810)
chr4 (260-386)||(10794911-10795036)
chr4 (267-384)||(2494403-2494520)
chr4 (262-331)||(42153066-42153135)
chr4 (314-369)||(4331350-4331405)
chr4 (269-320)||(22273761-22273812)
chr4 (306-397)||(26206344-26206435)
chr4 (287-342)||(31736431-31736486)
chr4 (268-383)||(43415293-43415408)
chr4 (258-300)||(825653-825695)
chr4 (261-382)||(30956643-30956764)
chr4 (262-320)||(30956808-30956866)
chr4 (324-386)||(45018556-45018618)
chr4 (261-331)||(48687047-48687116)
chr4 (305-382)||(9201655-9201731)
chr4 (358-399)||(31022457-31022498)
chr4 (259-320)||(48591325-48591386)
chr4 (326-386)||(2405213-2405272)
chr4 (262-330)||(7148886-7148953)
chr4 (286-386)||(8057089-8057189)
chr4 (285-329)||(11298697-11298741)
[»] chr2 (58 HSPs)
chr2 (285-401)||(4026910-4027025)
chr2 (264-401)||(38215986-38216119)
chr2 (261-401)||(29774705-29774845)
chr2 (285-401)||(33321298-33321414)
chr2 (260-401)||(25836698-25836839)
chr2 (264-395)||(4090452-4090583)
chr2 (11-112)||(4702696-4702799)
chr2 (285-401)||(21788441-21788557)
chr2 (268-386)||(2790071-2790190)
chr2 (286-376)||(34913401-34913491)
chr2 (261-401)||(755727-755867)
chr2 (324-401)||(36501501-36501578)
chr2 (305-401)||(4004823-4004919)
chr2 (258-372)||(33321418-33321532)
chr2 (304-396)||(887415-887507)
chr2 (261-401)||(11776944-11777084)
chr2 (289-395)||(13056319-13056425)
chr2 (259-401)||(38471777-38471919)
chr2 (304-401)||(12223855-12223952)
chr2 (285-395)||(29133659-29133769)
chr2 (254-371)||(2757087-2757202)
chr2 (285-401)||(5516059-5516176)
chr2 (268-401)||(5903500-5903633)
chr2 (259-381)||(13097874-13097998)
chr2 (305-397)||(32366154-32366245)
chr2 (324-396)||(42839312-42839383)
chr2 (306-386)||(43787804-43787884)
chr2 (258-397)||(32522036-32522174)
chr2 (261-395)||(37409603-37409737)
chr2 (322-401)||(39592270-39592349)
chr2 (323-385)||(12442835-12442897)
chr2 (306-379)||(30995908-30995984)
chr2 (259-331)||(755612-755684)
chr2 (261-397)||(2401612-2401747)
chr2 (268-397)||(7480889-7481021)
chr2 (305-397)||(22898347-22898438)
chr2 (304-397)||(12238476-12238566)
chr2 (306-401)||(12683592-12683687)
chr2 (288-379)||(27881005-27881096)
chr2 (285-343)||(27703502-27703560)
chr2 (261-331)||(33321215-33321285)
chr2 (42-112)||(4706069-4706141)
chr2 (311-399)||(8832464-8832555)
chr2 (266-331)||(8832570-8832635)
chr2 (285-382)||(9140735-9140831)
chr2 (334-395)||(16108114-16108175)
chr2 (260-320)||(4533446-4533506)
chr2 (288-364)||(8441460-8441536)
chr2 (305-365)||(41554602-41554662)
chr2 (365-401)||(42382684-42382720)
chr2 (261-364)||(37419987-37420089)
chr2 (261-331)||(36501418-36501488)
chr2 (261-298)||(9140647-9140684)
chr2 (266-370)||(11072911-11073015)
chr2 (350-399)||(17546473-17546522)
chr2 (263-364)||(40301314-40301414)
chr2 (258-330)||(5903729-5903801)
chr2 (262-345)||(25836617-25836698)
[»] chr7 (62 HSPs)
chr7 (268-401)||(38372525-38372658)
chr7 (304-397)||(29378648-29378741)
chr7 (267-384)||(30181516-30181633)
chr7 (264-401)||(34922894-34923033)
chr7 (286-386)||(44613474-44613574)
chr7 (266-397)||(22575551-22575682)
chr7 (266-396)||(29390542-29390671)
chr7 (266-407)||(22319271-22319412)
chr7 (285-400)||(19308478-19308593)
chr7 (261-364)||(40629440-40629542)
chr7 (304-391)||(47511046-47511133)
chr7 (260-397)||(16958775-16958911)
chr7 (305-401)||(41677378-41677475)
chr7 (258-397)||(16932920-16933058)
chr7 (258-397)||(16938303-16938441)
chr7 (258-396)||(14675951-14676087)
chr7 (259-401)||(37779268-37779405)
chr7 (309-401)||(14691285-14691378)
chr7 (266-369)||(7098118-7098221)
chr7 (285-399)||(23119908-23120022)
chr7 (295-400)||(14593142-14593250)
chr7 (288-401)||(22032749-22032862)
chr7 (306-397)||(41094223-41094312)
chr7 (334-401)||(17944686-17944753)
chr7 (347-401)||(6406858-6406912)
chr7 (306-391)||(20888578-20888664)
chr7 (351-401)||(46744003-46744053)
chr7 (305-401)||(23356477-23356573)
chr7 (288-401)||(47654400-47654513)
chr7 (347-399)||(16012744-16012796)
chr7 (305-397)||(19913949-19914041)
chr7 (324-383)||(14536905-14536964)
chr7 (261-320)||(29378769-29378828)
chr7 (261-392)||(35809050-35809181)
chr7 (305-383)||(43391725-43391803)
chr7 (268-389)||(18837189-18837315)
chr7 (304-393)||(28004587-28004675)
chr7 (334-395)||(39279462-39279523)
chr7 (350-399)||(48949769-48949818)
chr7 (305-401)||(991504-991599)
chr7 (337-401)||(12473389-12473453)
chr7 (305-401)||(23137149-23137244)
chr7 (268-320)||(26331778-26331830)
chr7 (305-400)||(35246676-35246768)
chr7 (334-401)||(7774733-7774799)
chr7 (258-320)||(22032886-22032948)
chr7 (268-331)||(29390461-29390524)
chr7 (311-394)||(31613658-31613741)
chr7 (261-320)||(35331102-35331161)
chr7 (356-386)||(14730019-14730049)
chr7 (324-386)||(21027514-21027576)
chr7 (262-320)||(25908418-25908476)
chr7 (285-399)||(48021636-48021749)
chr7 (268-401)||(48895264-48895401)
chr7 (353-401)||(18765098-18765147)
chr7 (268-364)||(19496325-19496422)
chr7 (292-345)||(21249147-21249200)
chr7 (308-401)||(32917578-32917671)
chr7 (285-345)||(12473190-12473250)
chr7 (259-331)||(33204947-33205019)
chr7 (304-368)||(41037756-41037819)
chr7 (265-401)||(44799368-44799502)
[»] chr1 (82 HSPs)
chr1 (266-401)||(4068080-4068215)
chr1 (261-399)||(26946092-26946231)
chr1 (260-401)||(28689961-28690104)
chr1 (306-401)||(15515333-15515428)
chr1 (258-401)||(26435161-26435303)
chr1 (270-401)||(35590099-35590230)
chr1 (304-401)||(6337742-6337839)
chr1 (304-401)||(36422967-36423064)
chr1 (268-397)||(37712035-37712163)
chr1 (306-401)||(37329398-37329493)
chr1 (265-394)||(18327488-18327617)
chr1 (304-401)||(48819302-48819399)
chr1 (310-401)||(16888952-16889042)
chr1 (311-397)||(26988158-26988244)
chr1 (304-401)||(3069840-3069937)
chr1 (324-401)||(41196696-41196773)
chr1 (288-401)||(49971238-49971351)
chr1 (286-401)||(13038932-13039047)
chr1 (259-401)||(32497258-32497399)
chr1 (286-401)||(9572770-9572886)
chr1 (266-401)||(16225474-16225607)
chr1 (258-397)||(17814148-17814286)
chr1 (288-395)||(51162256-51162363)
chr1 (269-394)||(1321510-1321635)
chr1 (259-401)||(15791342-15791483)
chr1 (304-397)||(45267468-45267562)
chr1 (304-401)||(1005343-1005440)
chr1 (304-401)||(17628411-17628507)
chr1 (305-399)||(26542977-26543071)
chr1 (288-401)||(15631891-15632004)
chr1 (285-386)||(20169248-20169349)
chr1 (306-395)||(50919493-50919581)
chr1 (305-401)||(13412439-13412534)
chr1 (329-385)||(23544819-23544875)
chr1 (304-395)||(5243396-5243486)
chr1 (260-395)||(5347114-5347248)
chr1 (285-368)||(10850090-10850173)
chr1 (286-401)||(46689536-46689651)
chr1 (261-331)||(28690117-28690187)
chr1 (285-383)||(46473078-46473176)
chr1 (268-365)||(1265715-1265812)
chr1 (304-397)||(3116052-3116144)
chr1 (305-385)||(10082254-10082335)
chr1 (304-401)||(22593393-22593490)
chr1 (304-397)||(31378741-31378834)
chr1 (262-357)||(391129-391225)
chr1 (263-331)||(37712180-37712248)
chr1 (290-401)||(41003376-41003487)
chr1 (263-400)||(1565368-1565504)
chr1 (306-397)||(10365176-10365266)
chr1 (334-401)||(18317034-18317101)
chr1 (269-368)||(37148112-37148211)
chr1 (269-368)||(37156937-37157036)
chr1 (334-393)||(39658317-39658376)
chr1 (307-378)||(39941516-39941587)
chr1 (258-383)||(35282598-35282722)
chr1 (261-331)||(37329315-37329385)
chr1 (307-369)||(39941447-39941509)
chr1 (289-399)||(42591370-42591480)
chr1 (304-397)||(22103114-22103205)
chr1 (286-399)||(25485733-25485846)
chr1 (304-397)||(28122619-28122712)
chr1 (266-331)||(35897527-35897592)
chr1 (306-395)||(36259283-36259372)
chr1 (262-330)||(6900625-6900693)
chr1 (353-401)||(14461027-14461075)
chr1 (258-399)||(19284853-19284996)
chr1 (341-396)||(1683892-1683947)
chr1 (328-395)||(34265596-34265663)
chr1 (261-320)||(41196613-41196672)
chr1 (268-331)||(47413485-47413548)
chr1 (267-397)||(16708765-16708895)
chr1 (269-331)||(26435086-26435148)
chr1 (328-394)||(29333444-29333510)
chr1 (324-398)||(41130017-41130091)
chr1 (306-399)||(46500988-46501082)
chr1 (339-397)||(23369332-23369392)
chr1 (267-364)||(35897646-35897743)
chr1 (262-331)||(48819412-48819481)
chr1 (261-329)||(4068230-4068298)
chr1 (353-401)||(38781130-38781178)
chr1 (304-364)||(51409730-51409790)
[»] chr8 (58 HSPs)
chr8 (260-401)||(32131399-32131540)
chr8 (306-401)||(10298912-10299007)
chr8 (309-399)||(16972344-16972435)
chr8 (304-379)||(35453413-35453488)
chr8 (259-401)||(42102065-42102206)
chr8 (304-401)||(32975690-32975787)
chr8 (304-401)||(34286550-34286646)
chr8 (289-401)||(19327855-19327966)
chr8 (304-382)||(28879061-28879139)
chr8 (323-393)||(35168435-35168505)
chr8 (290-401)||(19925546-19925657)
chr8 (266-401)||(42363303-42363437)
chr8 (285-391)||(16706096-16706202)
chr8 (260-401)||(12607039-12607179)
chr8 (266-401)||(13131395-13131539)
chr8 (306-401)||(11988202-11988296)
chr8 (306-397)||(24350509-24350600)
chr8 (304-399)||(38895662-38895757)
chr8 (266-408)||(19925368-19925509)
chr8 (304-386)||(35285931-35286013)
chr8 (304-385)||(2669651-2669732)
chr8 (304-397)||(9131118-9131211)
chr8 (306-399)||(14709525-14709617)
chr8 (287-397)||(8216893-8217005)
chr8 (261-401)||(38338837-38338976)
chr8 (306-401)||(8752811-8752906)
chr8 (266-397)||(30973954-30974085)
chr8 (285-383)||(32924216-32924314)
chr8 (304-401)||(28280712-28280809)
chr8 (288-397)||(43577208-43577317)
chr8 (327-395)||(24866943-24867011)
chr8 (347-399)||(25333720-25333771)
chr8 (263-331)||(28879168-28879236)
chr8 (350-397)||(37410903-37410950)
chr8 (261-331)||(13131556-13131626)
chr8 (304-366)||(32213043-32213105)
chr8 (259-329)||(32975802-32975872)
chr8 (304-401)||(41145382-41145481)
chr8 (259-331)||(16706001-16706073)
chr8 (268-329)||(16972266-16972327)
chr8 (306-386)||(2563363-2563443)
chr8 (259-395)||(3664094-3664229)
chr8 (305-397)||(14262330-14262422)
chr8 (268-396)||(14942391-14942519)
chr8 (306-397)||(32751143-32751234)
chr8 (306-397)||(218244-218333)
chr8 (306-397)||(694804-694893)
chr8 (306-397)||(699013-699102)
chr8 (306-397)||(731867-731956)
chr8 (306-397)||(855763-855852)
chr8 (350-397)||(36907634-36907681)
chr8 (266-320)||(2019716-2019770)
chr8 (306-364)||(13265489-13265547)
chr8 (263-320)||(24350424-24350481)
chr8 (289-345)||(7638511-7638567)
chr8 (304-368)||(29243083-29243146)
chr8 (350-401)||(35055468-35055522)
chr8 (305-401)||(38195491-38195586)
[»] chr5 (80 HSPs)
chr5 (304-401)||(28625483-28625580)
chr5 (263-401)||(42851984-42852121)
chr5 (262-386)||(1473317-1473441)
chr5 (305-401)||(13060588-13060684)
chr5 (306-394)||(41534628-41534716)
chr5 (268-401)||(12467231-12467365)
chr5 (270-386)||(14243792-14243909)
chr5 (285-401)||(29922175-29922291)
chr5 (266-401)||(1576596-1576730)
chr5 (266-401)||(1608085-1608219)
chr5 (285-401)||(22201918-22202038)
chr5 (334-401)||(41419534-41419601)
chr5 (308-401)||(1868853-1868946)
chr5 (268-401)||(24030182-24030314)
chr5 (305-401)||(12987000-12987096)
chr5 (305-401)||(17657246-17657342)
chr5 (285-399)||(2878665-2878778)
chr5 (304-399)||(42706799-42706896)
chr5 (285-366)||(2670059-2670140)
chr5 (268-381)||(3520509-3520621)
chr5 (268-397)||(15413959-15414088)
chr5 (304-401)||(41059775-41059872)
chr5 (261-401)||(26002957-26003097)
chr5 (323-394)||(31637087-31637158)
chr5 (268-402)||(1371979-1372112)
chr5 (324-401)||(5559905-5559985)
chr5 (304-401)||(35536845-35536945)
chr5 (304-401)||(40452463-40452561)
chr5 (265-386)||(341954-342075)
chr5 (286-371)||(10537235-10537320)
chr5 (261-366)||(11163290-11163395)
chr5 (261-406)||(15122505-15122649)
chr5 (273-366)||(17128250-17128343)
chr5 (304-401)||(28357355-28357452)
chr5 (288-401)||(43318990-43319103)
chr5 (304-399)||(13625508-13625604)
chr5 (255-401)||(7364295-7364441)
chr5 (307-401)||(11912088-11912182)
chr5 (309-377)||(3977483-3977551)
chr5 (304-364)||(43268644-43268704)
chr5 (268-386)||(40415973-40416091)
chr5 (259-331)||(1576743-1576816)
chr5 (259-331)||(1607999-1608072)
chr5 (312-401)||(6144749-6144838)
chr5 (312-401)||(38461268-38461357)
chr5 (290-386)||(11706919-11707015)
chr5 (269-401)||(11991273-11991404)
chr5 (347-395)||(28357187-28357235)
chr5 (264-368)||(42558740-42558842)
chr5 (258-397)||(780558-780696)
chr5 (304-386)||(40697004-40697091)
chr5 (260-394)||(20458551-20458684)
chr5 (303-401)||(29418738-29418836)
chr5 (258-384)||(33757045-33757170)
chr5 (260-345)||(35536945-35537028)
chr5 (268-329)||(6125401-6125462)
chr5 (306-367)||(30852176-30852237)
chr5 (305-401)||(7984109-7984205)
chr5 (259-331)||(17868105-17868177)
chr5 (260-384)||(33667396-33667519)
chr5 (288-395)||(6025977-6026083)
chr5 (305-408)||(6125291-6125393)
chr5 (306-401)||(16722032-16722126)
chr5 (262-320)||(2577482-2577540)
chr5 (266-361)||(6150346-6150437)
chr5 (258-386)||(7110988-7111112)
chr5 (262-331)||(27806028-27806098)
chr5 (273-383)||(27981916-27982026)
chr5 (304-401)||(29659065-29659160)
chr5 (268-330)||(41125671-41125733)
chr5 (285-366)||(22573637-22573718)
chr5 (324-401)||(23087765-23087842)
chr5 (306-364)||(33803814-33803874)
chr5 (305-386)||(39990580-39990661)
chr5 (304-364)||(1943013-1943073)
chr5 (259-379)||(4728804-4728923)
chr5 (260-320)||(14243949-14244009)
chr5 (347-399)||(27805961-27806013)
chr5 (269-345)||(40452388-40452463)
chr5 (305-361)||(43010639-43010695)
[»] chr3 (55 HSPs)
chr3 (273-401)||(40581062-40581191)
chr3 (269-401)||(53218026-53218158)
chr3 (262-395)||(22809185-22809319)
chr3 (267-394)||(10272088-10272213)
chr3 (262-401)||(29270322-29270461)
chr3 (263-401)||(34707699-34707837)
chr3 (304-401)||(52021249-52021347)
chr3 (304-393)||(43079928-43080017)
chr3 (285-383)||(51409377-51409475)
chr3 (304-401)||(40240563-40240660)
chr3 (259-401)||(29614152-29614293)
chr3 (266-397)||(584985-585116)
chr3 (307-401)||(48597853-48597947)
chr3 (304-401)||(52421127-52421224)
chr3 (267-386)||(2086692-2086811)
chr3 (294-401)||(28741200-28741307)
chr3 (259-401)||(3645261-3645402)
chr3 (308-401)||(42956165-42956258)
chr3 (334-401)||(23816157-23816224)
chr3 (268-385)||(3845822-3845939)
chr3 (268-373)||(21296733-21296838)
chr3 (288-380)||(10448761-10448853)
chr3 (304-392)||(45331290-45331378)
chr3 (305-401)||(4257286-4257383)
chr3 (305-383)||(7292684-7292762)
chr3 (309-399)||(10521162-10521252)
chr3 (305-399)||(10667402-10667496)
chr3 (259-401)||(20894461-20894602)
chr3 (305-386)||(24842108-24842189)
chr3 (304-385)||(3870228-3870309)
chr3 (258-386)||(4974268-4974396)
chr3 (307-379)||(30473151-30473223)
chr3 (305-401)||(32901134-32901230)
chr3 (260-401)||(33946536-33946669)
chr3 (334-386)||(43069079-43069131)
chr3 (262-329)||(40240482-40240548)
chr3 (270-331)||(242019-242081)
chr3 (286-380)||(3876270-3876364)
chr3 (348-398)||(50021958-50022007)
chr3 (348-401)||(7300410-7300463)
chr3 (312-401)||(43971833-43971922)
chr3 (353-401)||(20685837-20685885)
chr3 (258-338)||(23555441-23555521)
chr3 (259-391)||(30383726-30383858)
chr3 (306-366)||(36266249-36266309)
chr3 (354-397)||(20174930-20174973)
chr3 (350-401)||(37778182-37778233)
chr3 (285-383)||(11528875-11528973)
chr3 (339-397)||(19307979-19308037)
chr3 (350-401)||(29830625-29830680)
chr3 (262-331)||(52895309-52895378)
chr3 (268-320)||(20685909-20685961)
chr3 (269-345)||(30499934-30500010)
chr3 (259-319)||(35480303-35480362)
chr3 (260-320)||(43079836-43079896)
[»] scaffold0024 (2 HSPs)
scaffold0024 (304-401)||(97195-97289)
scaffold0024 (258-327)||(97106-97175)
[»] chr6 (50 HSPs)
chr6 (286-401)||(2255719-2255834)
chr6 (259-394)||(21891331-21891466)
chr6 (268-408)||(25430745-25430882)
chr6 (263-401)||(7267737-7267875)
chr6 (304-397)||(2027166-2027259)
chr6 (304-393)||(2034223-2034312)
chr6 (255-399)||(8014743-8014886)
chr6 (286-401)||(6758612-6758727)
chr6 (304-401)||(6776811-6776908)
chr6 (261-386)||(24625811-24625936)
chr6 (261-397)||(17914906-17915041)
chr6 (304-400)||(21025214-21025310)
chr6 (286-401)||(29623463-29623578)
chr6 (285-367)||(30533964-30534046)
chr6 (304-401)||(29052336-29052433)
chr6 (285-399)||(10873970-10874082)
chr6 (258-401)||(32615401-32615543)
chr6 (268-401)||(3210982-3211120)
chr6 (305-401)||(1240596-1240693)
chr6 (263-368)||(9894728-9894833)
chr6 (305-401)||(32675875-32675971)
chr6 (304-401)||(34801036-34801132)
chr6 (304-368)||(10054384-10054448)
chr6 (353-401)||(32165247-32165295)
chr6 (267-401)||(10687273-10687410)
chr6 (304-379)||(10755288-10755363)
chr6 (306-401)||(16589756-16589851)
chr6 (306-401)||(16605529-16605624)
chr6 (305-400)||(21871271-21871365)
chr6 (285-383)||(3829923-3830021)
chr6 (288-397)||(21610039-21610148)
chr6 (288-380)||(6632646-6632738)
chr6 (326-401)||(6958649-6958724)
chr6 (274-388)||(10619202-10619314)
chr6 (266-401)||(23239212-23239347)
chr6 (304-397)||(4808575-4808667)
chr6 (304-397)||(10184320-10184412)
chr6 (334-391)||(13429488-13429545)
chr6 (323-383)||(34509934-34509994)
chr6 (348-399)||(9202387-9202438)
chr6 (312-399)||(34413331-34413417)
chr6 (286-364)||(2040209-2040287)
chr6 (305-363)||(12817116-12817174)
chr6 (304-397)||(1468179-1468270)
chr6 (306-395)||(4272387-4272476)
chr6 (265-318)||(11795524-11795577)
chr6 (262-331)||(12816805-12816874)
chr6 (266-343)||(35111379-35111456)
chr6 (291-343)||(6752809-6752861)
chr6 (260-397)||(8011034-8011173)
[»] scaffold0157 (1 HSPs)
scaffold0157 (289-401)||(24733-24847)
[»] scaffold0048 (1 HSPs)
scaffold0048 (285-399)||(58856-58970)
[»] scaffold0332 (1 HSPs)
scaffold0332 (304-401)||(14732-14829)
[»] scaffold0057 (2 HSPs)
scaffold0057 (284-397)||(24379-24491)
scaffold0057 (285-368)||(43835-43918)
[»] scaffold0012 (1 HSPs)
scaffold0012 (261-397)||(178460-178597)
[»] scaffold1367 (1 HSPs)
scaffold1367 (305-401)||(1062-1158)
[»] scaffold0004 (2 HSPs)
scaffold0004 (304-397)||(227709-227803)
scaffold0004 (258-401)||(242626-242768)
[»] scaffold0041 (1 HSPs)
scaffold0041 (306-397)||(108984-109073)
[»] scaffold0006 (1 HSPs)
scaffold0006 (305-401)||(278978-279073)
[»] scaffold0299 (1 HSPs)
scaffold0299 (305-401)||(11286-11382)
[»] scaffold1088 (1 HSPs)
scaffold1088 (274-397)||(1267-1390)
[»] scaffold0512 (1 HSPs)
scaffold0512 (312-398)||(4076-4161)
[»] scaffold0015 (1 HSPs)
scaffold0015 (266-331)||(48536-48601)


Alignment Details
Target: chr4 (Bit Score: 93; Significance: 4e-45; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 261 - 397
Target Start/End: Original strand, 35124347 - 35124483
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    ||||||| ||||||||||||| | |||||||||||||||||  ||||||||||||| |||  ||||||||||||||||||||| | ||||||||||||||    
T  35124347 agggcccatttggattgacttatttttgagcttatgcaaaacagcttatgcaaatatataaccttttatgtactattcataagcttgtcaaggtagttta 35124446  T
Q  361 tgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||||||||||||||||| ||||||    
T  35124447 tgaaaaaacagcttatgaagatacaaattttgttagt 35124483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 259 - 386
Target Start/End: Complemental strand, 38345949 - 38345823
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    |||||| |||||||||||||||| | |||||||||||||||||  |||||| ||||||||||  |||||||||| |||||||||||| ||||| ||||||    
T  38345949 ttagggtccgtttggattgacttatgtttgagcttatgcaaaacagcttatccaaataaataagcttttatgtagtattcataagtt-gtcaaagtagtt 38345851  T
Q  359 tatgaaaaaacagcttatgaagatacaa 386  Q
    |||||||||||| |||||||||||||||    
T  38345850 tatgaaaaaacaacttatgaagatacaa 38345823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 262 - 401
Target Start/End: Original strand, 23297399 - 23297535
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 361  Q
    ||||| |||||||||| ||| | |||||||||||||||||  |||||||||||||||||  |||||||||| |||||||||||| |||||||||||||||    
T  23297399 gggcctgtttggattggcttatttttgagcttatgcaaaatagcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttat 23297498  T
Q  362 gaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |   ||||||||||||||||||||| ||| ||||| ||||    
T  23297499 g---aaacagcttatgaagatacaatttttgttagcgaga 23297535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 262 - 401
Target Start/End: Original strand, 29877600 - 29877739
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 361  Q
    ||||| |||||||||| ||| | |||||||||||||||||    |||||||||||||||  |||||||||| |||||||||| | |  ||||||||||||    
T  29877600 gggcctgtttggattggcttatttttgagcttatgcaaaacaatttatgcaaataaataagcttttatgtattattcataagcttgctaaggtagtttat 29877699  T
Q  362 gaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||| |||||||||||||||||| ||| ||||||||||    
T  29877700 gaaaaagcagcttatgaagatacaatttttgttagtgaga 29877739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 266 - 367
Target Start/End: Original strand, 3564185 - 3564286
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    |||||||||||||||| | |||||||||||||||||  ||||||| ||||||||| |||||||| || |||||||||||| |||||||||||||||||||    
T  3564185 ccgtttggattgacttgtttttgagcttatgcaaaacagcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttatgaaa 3564284  T
Q  366 aa 367  Q
    ||    
T  3564285 aa 3564286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 259 - 386
Target Start/End: Original strand, 948030 - 948158
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    |||||||||||||||| ||||||   ||| |||||||||||||  ||||||| |||||||||  |||||||||| ||||||||| || ||||||||||||    
T  948030 ttagggcccgtttggaatgacttactttttagcttatgcaaaatagcttatgaaaataaataagcttttatgtattattcataactttgtcaaggtagtt 948129  T
Q  359 tatg-aaaaaacagcttatgaagatacaa 386  Q
    |||| |||||||||||||| |||||||||    
T  948130 tatgaaaaaaacagcttataaagatacaa 948158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 52274203 - 52274106
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||| ||||||||||| |||| ||||| |  ||||||||||||| ||||||||||||||||||||||||| |||||| |||||||    
T  52274203 gcttatgcaaataaataaacttttatgtattattgataagcttatcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgtcagtgaga 52274106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 304 - 396
Target Start/End: Original strand, 28074368 - 28074459
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttag 396  Q
    |||||||||||||||||  |||||||||| |||||||||| | |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  28074368 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-agcttatgaagatacaattttcgttag 28074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 259 - 398
Target Start/End: Complemental strand, 43699611 - 43699470
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    |||| |||||||||||||| ||| | |||||||||||| ||||   ||||| ||||||||||  |||||||||  |||||||||| | ||||| ||||||    
T  43699611 ttagtgcccgtttggattggcttatttttgagcttatgaaaaacaacttatacaaataaataagcttttatgtcttattcataagcttgtcaatgtagtt 43699512  T
Q  359 tatgaaaaaacag--cttatgaagatacaaatttcgttagtg 398  Q
    |||||||||||||  ||||||||||||||| |||| ||||||    
T  43699511 tatgaaaaaacagctcttatgaagatacaattttcattagtg 43699470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 48591507 - 48591410
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||   |||||| || |||||||| | | |||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  48591507 gcttatgcaaataaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgaga 48591410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 286 - 397
Target Start/End: Original strand, 41228888 - 41228999
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 385  Q
    ||||||||||||||||  |||||||||  ||||||| ||||||| || |||||||||| | || ||||||||||||||||||||| || |||||||||||    
T  41228888 ttgagcttatgcaaaacagcttatgcaggtaaataggcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactgatgaagataca 41228987  T
Q  386 aatttcgttagt 397  Q
    | |||| |||||    
T  41228988 attttcattagt 41228999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 269 - 393
Target Start/End: Complemental strand, 1374481 - 1374356
Alignment:
Q  269 tttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 368  Q
    ||||||||| ||| | ||||||||||||||||||  |||||||||||||| |   ||||||| |  ||||||||| | |||| |||||||||||||||||    
T  1374481 tttggattggcttatttttgagcttatgcaaaaaaacttatgcaaataaaaaagtttttatgcatgattcataagcttgtcatggtagtttatgaaaaaa 1374382  T
Q  369 -cagcttatgaagatacaaatttcgt 393  Q
     |||||||||||||||||| ||||||    
T  1374381 ccagcttatgaagatacaattttcgt 1374356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 7148775 - 7148868
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||||  |||||||||| |||||||||| | ||||||||||||| |||||||||||||||| || |||||| |||| |||||    
T  7148775 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaacagcttataaaaatacaattttctttagt 7148868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 324 - 397
Target Start/End: Original strand, 17222852 - 17222925
Alignment:
Q  324 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||||| |||||||||| | ||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  17222852 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttagt 17222925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 304 - 399
Target Start/End: Original strand, 896973 - 897068
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    ||||||||||||||||| ||||||||||| |||||||||| | ||||| ||||||||||||||||||  ||| | |||||| | ||||||||||||    
T  896973 gcttatgcaaataaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattttcgttagtga 897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 401
Target Start/End: Complemental strand, 12495744 - 12495630
Alignment:
Q  289 agcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaa--ggtagtttatgaaaaaacagcttatgaagatacaa 386  Q
    |||||| ||||||  |||||||||||||||||  |||||||||| |||||||||| | |||||  |||||||||||||||||||||| || |||||||||    
T  12495744 agcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaa 12495645  T
Q  387 atttcgttagtgaga 401  Q
      ||| |||||||||    
T  12495644 tattcattagtgaga 12495630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 401
Target Start/End: Original strand, 33533885 - 33534028
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 357  Q
    |||||| |||||||||||||||||   |||||| |||| |||||   |||||||||||  |||  |||  | ||| |||||||||||| |||||||||||    
T  33533885 tttaggtcccgtttggattgacttaattttgagtttatacaaaacaacttatgcaaatttataagcttcaaggtattattcataagttagtcaaggtagt 33533984  T
Q  358 ttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||  | ||| |||||| ||||||||||||||    
T  33533985 ttatgaaaaaacagcccacgaatatacaattttcgttagtgaga 33534028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 401
Target Start/End: Original strand, 40699316 - 40699460
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    ||||||||| ||||||| ||| |  ||||||||||||||||  ||||||||||||||||| | ||||||||| |   |||||| | ||||||||||||||    
T  40699316 agggcccgtctggattggcttattattgagcttatgcaaaacagcttatgcaaataaataaatttttatgtagtgcgcataagcttgtcaaggtagttta 40699415  T
Q  361 tgaaaaaacag----cttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||     ||||||||||||||  |||||| |||||||    
T  40699416 tgaaaaaacaaacatcttatgaagatacagttttcgtaagtgaga 40699460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 401
Target Start/End: Original strand, 19725251 - 19725393
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    |||||| ||||||||| | |||| | || |||||||| |||||  |||||||||| ||||||   ||||||||| |||| ||||||| || |||||| ||    
T  19725251 ttagggtccgtttggaataacttattttagagcttatacaaaacagcttatgcaattaaatacgtttttatgtattatttataagtttgttaaggtattt 19725350  T
Q  359 tatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||  |||||||||| || |||| |||||||||    
T  19725351 tatgaaaaaacagtctatgaagatataattttcattagtgaga 19725393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 23335645 - 23335742
Alignment:
Q  304 gcttatgcaaataaat-agacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||| ||| ||||||||| ||||||||||    ||||||||||||||||||||||||||||||||||||||| |||| | |||||||    
T  23335645 gcttatgcaaataaatgaga-ttttatgtattattcataagcatatcaaggtagtttatgaaaaaacagcttatgaagatacaattttcataagtgaga 23335742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 383
Target Start/End: Complemental strand, 213048 - 212952
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 383  Q
    ||||||||||||||||   |||||||||||||||| | |||||| || |||||||||| | || ||||||||||||||||||||| ||||||||||||    
T  213048 ttgagcttatgcaaaacaacttatgcaaataaata-agttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagata 212952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 4603413 - 4603318
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||   ||||||||| |||| |||| ||  | |||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  4603413 cttatgcaaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgaga 4603318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 258 - 385
Target Start/End: Complemental strand, 42611997 - 42611870
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttt-tatgtactattcataagttggtcaaggtag 356  Q
    |||||| || |||||||||| ||| | ||| |||||||||||||   ||||||||||||||||  |||| |||||| |||||||||| | ||| || |||    
T  42611997 tttaggccctgtttggattggcttattttttagcttatgcaaaacaacttatgcaaataaataagctttatatgtattattcataagcttgtcgag-tag 42611899  T
Q  357 tttatgaaaaaacagcttatgaagataca 385  Q
    |||||||||||||| ||||||||||||||    
T  42611898 tttatgaaaaaacaacttatgaagataca 42611870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 401
Target Start/End: Original strand, 15184512 - 15184646
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    ||||||||||| |||| | || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||| ||  | ||| ||||||||||||    
T  15184512 ccgtttggattaacttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataattttttaaag-tagtttatgaaa 15184610  T
Q  366 aaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||| |||||||||||||| ||||||||||||||    
T  15184611 aaacagtttatgaagatacaattttcgttagtgaga 15184646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 401
Target Start/End: Complemental strand, 46704370 - 46704256
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 385  Q
    ||||||||||| ||||   |||||||||||||  || ||||||| || ||||||| || | || |||||||||||||||||||||||||||||||||| |    
T  46704370 ttgagcttatgtaaaacaacttatgcaaataataag-cttttatttattattcatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaa 46704272  T
Q  386 aatttcgttagtgaga 401  Q
    | |||| |||||||||    
T  46704271 attttcattagtgaga 46704256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 8130446 - 8130560
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    |||||||| | |||||||| ||| | ||| ||| |||||||||  |||||||||||||||||  |||||||| | |||||||||||| |||| ||||| |    
T  8130446 ttagggcctggttggattggcttattttttagcatatgcaaaacagcttatgcaaataaataagcttttatgcattattcataagtttgtcagggtagct 8130545  T
Q  359 tatgaaaaaacagct 373  Q
    |||||| ||||||||    
T  8130546 tatgaacaaacagct 8130560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 402
Target Start/End: Original strand, 35405644 - 35405785
Alignment:
Q  261 agggcccgttt-ggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 359  Q
    ||||||||||| |||||||||| | |||||||||||||||||   ||||| ||||||| || |  |||||||| ||| | |||  | ||||||  |||||    
T  35405644 agggcccgttttggattgacttatttttgagcttatgcaaaacaacttatacaaataacta-agatttatgtattatacttaatcttgtcaagacagttt 35405742  T
Q  360 atgaaaaaacagcttatgaagatacaaatttcgttagtgagac 402  Q
    |||||||||||||||||||||||| || |||||||||| ||||    
T  35405743 atgaaaaaacagcttatgaagatagaattttcgttagtaagac 35405785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 265 - 401
Target Start/End: Complemental strand, 7206708 - 7206572
Alignment:
Q  265 cccgtttggattga-cttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga 363  Q
    |||||||||||||| ||| | |||||||||||||| ||  |||||||||||| ||||  ||||||| || ||||||  ||   || ||||||||||||||    
T  7206708 cccgtttggattgagcttat-tttgagcttatgcagaacagcttatgcaaatgaataagcttttatttattattcacgagcctgttaaggtagtttatga 7206610  T
Q  364 aaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||| |||||||||||| |  ||||||||||||||    
T  7206609 aaaaacaacttatgaagataaagttttcgttagtgaga 7206572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 305 - 386
Target Start/End: Complemental strand, 27368234 - 27368153
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 386  Q
    ||||||||||||||||  ||||||| || |||||||||||| ||||| |||| |||||||||||||| |||| |||||||||    
T  27368234 cttatgcaaataaataagcttttatatattattcataagtttgtcaatgtagcttatgaaaaaacagtttataaagatacaa 27368153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 36740907 - 36741004
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||  ||||||| || ||| |||||| | ||||| |||||||||||||| |||| | |||||||||||| |||| |||||||||    
T  36740907 gcttatgcaaataaataagcttttatatattatgcataagcttgtcaaagtagtttatgaaaatacagttcatgaagatacaattttcattagtgaga 36741004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 305 - 386
Target Start/End: Complemental strand, 39932836 - 39932755
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 386  Q
    |||||||||||||||| ||||||||||| |||| ||||| | || |||||||| ||||||||||||  ||||||||||||||    
T  39932836 cttatgcaaataaataaacttttatgtattatttataagattgttaaggtagtgtatgaaaaaacaatttatgaagatacaa 39932755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 401
Target Start/End: Original strand, 47202786 - 47202925
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    |||||||||||||||| |||| | ||  |||||||  ||||  |||||||||||||||||   ||||||||| || | |||| ||  | |||||||||||    
T  47202786 agggcccgtttggattaacttattttatagcttatataaaacagcttatgcaaataaataagtttttatgtattacttataaattttt-aaggtagttta 47202884  T
Q  361 tgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||   |||||||||||||| ||||||||||||||    
T  47202885 tgaaaaaaccatttatgaagatacaattttcgttagtgaga 47202925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 395
Target Start/End: Complemental strand, 18424400 - 18424270
Alignment:
Q  264 gcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga 363  Q
    ||||||||| |||||| | | |||||||||||||||||    |||| ||||||||||  |||||||||| |||||||||  | || ||||||||||||||    
T  18424400 gcccgtttgaattgacatatttttgagcttatgcaaaacaatttatacaaataaataagcttttatgtattattcataaacttgtgaaggtagtttatga 18424301  T
Q  364 aaaaacagcttatgaagatacaaatttcgtta 395  Q
     ||||||  |||||||||||||| ||| ||||    
T  18424300 -aaaacaatttatgaagatacaatttttgtta 18424270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 401
Target Start/End: Complemental strand, 55638162 - 55638067
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||| |  |||||||||| |||||||||||| || ||  |||||||||||||||||| |||| |||||||||  | |||||||||||    
T  55638162 ttatgcaaataaacaagcttttatgtattattcataagtttgtaaatatagtttatgaaaaaacagtttataaagatacaatctccgttagtgaga 55638067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 351 - 401
Target Start/End: Original strand, 22273830 - 22273880
Alignment:
Q  351 aggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  22273830 aggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgaga 22273880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 399
Target Start/End: Complemental strand, 42617351 - 42617218
Alignment:
Q  265 cccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 364  Q
    ||||||||||||  ||| | || |||||||| |||||  |||||||||||||||||   ||||| ||| |||| |||||||  | |||||||||||||||    
T  42617351 cccgtttggattagcttattttagagcttatacaaaacagcttatgcaaataaatacgtttttaagtattatttataagttttt-aaggtagtttatgaa 42617253  T
Q  365 aaaacagcttatgaagatacaaatttcgttagtga 399  Q
    |||| || |||||||||||  | ||||||||||||    
T  42617252 aaaatagtttatgaagatatgattttcgttagtga 42617218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 488467 - 488370
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||| ||  |||||||||| |||| ||||| | ||||||||||||||||||||||  |||| | ||||||||| |||  |||||||||    
T  488467 gcttatgcaaataagtaagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaattgcttgtaaagatacaatttttattagtgaga 488370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 22397388 - 22397295
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||| |||||||||| |  || ||||| |||| ||||||  || ||||||||||||||||||||| |||||||| |||||| ||||||||||    
T  22397388 gcttatacaaataaataaatattaatgtattatttataagtctgttaaggtagtttatgaaaaaacaacttatgaatatacaattttcgttagt 22397295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 395
Target Start/End: Original strand, 28663606 - 28663667
Alignment:
Q  334 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 395  Q
    |||||||||| | ||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  28663606 tattcataagcttgtcaaggtagtttatgaaaaaacagattctgaagatacaattttcgtta 28663667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 397
Target Start/End: Complemental strand, 46176104 - 46175969
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    ||||||| ||||||||  ||| | || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||| ||  | |||||||||||    
T  46176104 agggcccatttggattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataaattttt-aaggtagttta 46176006  T
Q  361 tgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||| || |||||||||||||| ||||| ||||    
T  46176005 tgaaaaaatagtttatgaagatacaattttcgctagt 46175969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 397
Target Start/End: Complemental strand, 52700669 - 52700534
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    |||| |||||||||||||||| | || ||||||||||||| |  |||||| |||||||||    |||||||| |||| ||||| | || || || |||||    
T  52700669 agggtccgtttggattgacttattttagagcttatgcaaacaa-cttatgtaaataaataagtctttatgtattatttataagcttgtaaaagtggttta 52700571  T
Q  361 tgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||| || |||||||||||| | ||||||||||    
T  52700570 tgaaaaaatagtttatgaagatacgattttcgttagt 52700534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 399
Target Start/End: Original strand, 825685 - 825780
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    |||||||||||||||||  ||||| | || ||||||||||   ||| || |||||||||||||||||||| |||||||||||  ||| ||||||||    
T  825685 gcttatgcaaataaataagcttttctatattattcataagcctgtctagttagtttatgaaaaaacagctcatgaagatacattttttgttagtga 825780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 18630932 - 18630881
Alignment:
Q  350 aaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  18630932 aaggtagtttatgaaaaaacagcttatgaagataaagttttcgttagtgaga 18630881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 386
Target Start/End: Original strand, 32628737 - 32628863
Alignment:
Q  257 ctttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtag 356  Q
    |||| |||| ||||||||||| ||| | |||||||||||||||||  |||| || |||   |||  ||||| |||  |||||||||| | ||| |||||     
T  32628737 ctttggggctcgtttggattgtcttatttttgagcttatgcaaaacagcttttgaaaa---ataagcttttttgtgttattcataagcttgtcgaggtaa 32628833  T
Q  357 tttatgaaaaaacagcttatgaagatacaa 386  Q
    |||||||||||||||||| |||||||||||    
T  32628834 tttatgaaaaaacagcttgtgaagatacaa 32628863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 401
Target Start/End: Original strand, 46650276 - 46650371
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||  |||| ||||| ||||||||| || || |  |||||||||||||||| || |||| |||| |||| ||||||||||||||    
T  46650276 ttatgcaaataaataagctttcatgtattattcataaatttgtaattgtagtttatgaaaaaatagtttataaagaaacaattttcgttagtgaga 46650371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 34633359 - 34633429
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    ||||||||||||||||| ||| | ||| |||||||||||||   |||||||||||||||| ||||||||||    
T  34633359 agggcccgtttggattggcttattttttagcttatgcaaaacaacttatgcaaataaataaacttttatgt 34633429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 2141644 - 2141737
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||||  |||||||||  |||| |||| || || ||||||  |||| ||||||||| |||||||||||||| |||| |||||    
T  2141644 gcttatgcaaataaataagcttttatgtgttatttataactttgttaaggtatattataaaaaaacagtttatgaagatacaattttcattagt 2141737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 15179821 - 15179913
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||||||||||||| | ||||||||| |||| |||||||  | ||||||||||||||| |||  | ||||||| |||||| ||||||||||    
T  15179821 gcttatgcaaataaatatatttttatgtattatttataagtt-tttaaggtagtttatgaagaaatggattatgaaaatacaattttcgttagt 15179913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 397
Target Start/End: Original strand, 35010234 - 35010307
Alignment:
Q  324 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||||| |||| ||||||| ||||| ||||||||||| |||| || |||| ||||||||| ||||||||||    
T  35010234 ttttatgtattatttataagtttgtcaacgtagtttatgataaaatagtttataaagatacaagtttcgttagt 35010307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 401
Target Start/End: Complemental strand, 36255087 - 36255022
Alignment:
Q  336 ttcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||| | ||||| ||||||| |||||||||||||||||||||||||| |||  |||||||||    
T  36255087 ttcataagcttgtcaacgtagtttgtgaaaaaacagcttatgaagatacaattttaattagtgaga 36255022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 331
Target Start/End: Complemental strand, 3564383 - 3564319
Alignment:
Q  267 cgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    ||||||||||||||| | |||||||||||| ||||  |||||||||||||||||  |||||||||    
T  3564383 cgtttggattgacttatttttgagcttatgaaaaatagcttatgcaaataaataatcttttatgt 3564319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 22117358 - 22117449
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||| | ||||||||| |||| |||||||  | |||||||||||||||||||  | ||||||| || ||| ||||||||||    
T  22117358 cttatgcaaataaatacatttttatgtattatttataagtt-tttaaggtagtttatgaaaaaatgggttatgaaaatgcaattttcgttagt 22117449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 399
Target Start/End: Original strand, 8601204 - 8601299
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    ||||||||||||||||   ||||| | || |||| |||||   ||||| ||||||||||||||||| | |||||||||||||| ||| ||||||||    
T  8601204 gcttatgcaaataaatgagcttttttctattatttataagcctgtcaatgtagtttatgaaaaaactggttatgaagatacaatttttgttagtga 8601299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 391
Target Start/End: Complemental strand, 21216391 - 21216324
Alignment:
Q  324 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttc 391  Q
    ||||||||| |||||||||| | |||||||||||||||||||||  || |||||||| ||||| ||||    
T  21216391 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaagtaggttatgaagctacaattttc 21216324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 39931581 - 39931530
Alignment:
Q  350 aaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||||||   |||||||||||||| ||||||||||||||    
T  39931581 aaggtagtttatgaaaaaaccatttatgaagatacaattttcgttagtgaga 39931530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 2702834 - 2702705
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagactttta-tgtactattcataagttggtcaaggtagtttatgaaaa 366  Q
    |||||||||| ||| | || |||||||||||||   ||||||||| ||||||| | | ||| |||| |||| ||||||| || ||||||||| |||||||    
T  2702834 gtttggattggcttattttagagcttatgcaaagcagcttatgcacataaata-agtattagtgtattatttataagtttgttaaggtagttaatgaaaa 2702736  T
Q  367 aacagcttatgaagatacaaatttcgttagt 397  Q
     ||| |||||||| |||||| |||| |||||    
T  2702735 gacaacttatgaatatacaattttcattagt 2702705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 382
Target Start/End: Original strand, 3966733 - 3966810
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagat 382  Q
    ||||||||||||||||| | ||||||||| | ||||||||||  ||||| || |||||| |||||||| ||||||||||    
T  3966733 gcttatgcaaataaataaatttttatgtattgttcataagtt-ttcaagctattttatggaaaaacaggttatgaagat 3966810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 386
Target Start/End: Complemental strand, 10795036 - 10794911
Alignment:
Q  260 tagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 359  Q
    ||||| ||||||| |||||||| | || ||||||||||||||  |||| || |||||||||   ||||||||| |||| | ||| | || ||||| ||||    
T  10795036 tagggtccgtttgaattgacttattttagagcttatgcaaaacagcttgtgtaaataaataagtttttatgtattatttaaaagctcgttaaggtggttt 10794937  T
Q  360 atgaaaaaacagcttatgaagatacaa 386  Q
    |||| |||| || ||||||||||||||    
T  10794936 atga-aaaatagtttatgaagatacaa 10794911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 384
Target Start/End: Complemental strand, 2494520 - 2494403
Alignment:
Q  267 cgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 366  Q
    ||||||||||| ||| | || || |||||||||||  | ||||| ||||| |||  ||||||  || |||| ||||| | || |||||||||||||||||    
T  2494520 cgtttggattgccttatattagatcttatgcaaaatagtttatgtaaatagataagcttttacatattatttataagcttgtaaaggtagtttatgaaaa 2494421  T
Q  367 aacagcttatgaagatac 384  Q
    || || ||||||||||||    
T  2494420 aatagtttatgaagatac 2494403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 42153066 - 42153135
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    |||||||||||||||| ||| | |||||||||| | ||||  |||||||||||||||||  |||||||||    
T  42153066 gggcccgtttggattggcttatttttgagcttacgtaaaatagcttatgcaaataaataagcttttatgt 42153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 369
Target Start/End: Original strand, 4331350 - 4331405
Alignment:
Q  314 ataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaac 369  Q
    |||||||  ||||||| || ||||||||| || |||||||||||||||||||||||    
T  4331350 ataaataagcttttatttattattcataactttgtcaaggtagtttatgaaaaaac 4331405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 320
Target Start/End: Original strand, 22273761 - 22273812
Alignment:
Q  269 tttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    ||||||||||||| | |||||||||||||| ||  |||||||||||||||||    
T  22273761 tttggattgacttatttttgagcttatgcataatagcttatgcaaataaata 22273812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 397
Target Start/End: Complemental strand, 26206435 - 26206344
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||    |||||||| |||| ||||| | || || ||||||||||||||||||| |||||||  ||| | ||||||||||    
T  26206435 ttatgcaaataaatatgtctttatgtattatttataagattgttaacgtagtttatgaaaaaacagtttatgaatgtactattttcgttagt 26206344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 342
Target Start/End: Complemental strand, 31736486 - 31736431
Alignment:
Q  287 tgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataa 342  Q
    |||||||||||||||   |||||| ||||||||| | |||||||||||||||||||    
T  31736486 tgagcttatgcaaaacaacttatgtaaataaataaaattttatgtactattcataa 31736431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 383
Target Start/End: Complemental strand, 43415408 - 43415293
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 367  Q
    ||||| |||||||| | |||||||||| | ||||   ||| ||||||||||||   ||||||||| |||||||||| | || || |||||||| ||||||    
T  43415408 gtttgaattgacttatttttgagcttaagtaaaacaacttctgcaaataaataagtttttatgtattattcataaggttgttaatgtagtttacgaaaaa 43415309  T
Q  368 acagcttatgaagata 383  Q
    |||  |||| ||||||    
T  43415308 acaatttatcaagata 43415293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 300
Target Start/End: Original strand, 825653 - 825695
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaa 300  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||    
T  825653 tttagggcctgtttggattggcttctttttgagcttatgcaaa 825695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 382
Target Start/End: Original strand, 30956643 - 30956764
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagttt 359  Q
    ||||||||||||| ||||||| | ||| || |||||||||||  ||| | ||||||||||  ||||| ||||| || ||| ||| |  ||||||||||||    
T  30956643 agggcccgtttgggttgacttattttttagtttatgcaaaaaa-cttgtacaaataaataagctttttatgtattactcacaagcttctcaaggtagttt 30956741  T
Q  360 atgaaaaaacagcttatgaagat 382  Q
    |||||||||| | ||| ||||||    
T  30956742 atgaaaaaacggtttacgaagat 30956764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 320
Target Start/End: Complemental strand, 30956866 - 30956808
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    |||||||| ||||||||||| | ||| |||||||| ||||  |||||||||||||||||    
T  30956866 gggcccgtatggattgacttattttttagcttatgaaaaatagcttatgcaaataaata 30956808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 45018556 - 45018618
Alignment:
Q  324 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 386  Q
    |||||| || ||||||| || | || || |||||||||||||||||| |||||||||||||||    
T  45018556 ttttatttattattcatgagattgttaaagtagtttatgaaaaaacaacttatgaagatacaa 45018618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 48687116 - 48687047
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    |||||| |||||||||| ||| | |||||||||||| ||| | ||||||||||||||||| |||| |||||    
T  48687116 agggcctgtttggattgccttatttttgagcttatgaaaata-gcttatgcaaataaataaacttatatgt 48687047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 9201655 - 9201731
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagat 382  Q
    ||||||||||||||||   ||||||||| |||| |||||||  ||||| || |||||| |||||||| ||||||||||    
T  9201655 cttatgcaaataaataagtttttatgtattatttataagtt-ttcaagctattttatggaaaaacaggttatgaagat 9201731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 399
Target Start/End: Original strand, 31022457 - 31022498
Alignment:
Q  358 ttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    ||||||||||||||||||| ||||||||| |||||| |||||    
T  31022457 ttatgaaaaaacagcttataaagatacaattttcgtcagtga 31022498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 48591325 - 48591386
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    |||||| || ||||||||| ||| | |||||||||||| ||||  |||||||||||||||||    
T  48591325 ttagggtccatttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaata 48591386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 2405213 - 2405272
Alignment:
Q  326 ttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 386  Q
    ||||||| |||| ||||| | ||||| |||||||||||||||| |||||||| ||||||||    
T  2405213 ttatgtattatt-ataagcttgtcaatgtagtttatgaaaaaatagcttatgtagatacaa 2405272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 7148953 - 7148886
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatg 330  Q
    |||| ||||||||||||||| | | |||||||||| ||| | |||||||||||||||||  ||||||||    
T  7148953 gggctcgtttggattgacttatttctgagcttatgaaaata-gcttatgcaaataaataagcttttatg 7148886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 386
Target Start/End: Complemental strand, 8057189 - 8057089
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 385  Q
    ||||||||||| ||||   || ||||||| |||||   |||||| || |||||||||| | |||||||||| ||| ||||||||   |||||||||||||    
T  8057189 ttgagcttatgaaaaataactaatgcaaaaaaataagtttttatttattattcataagcttgtcaaggtagcttaagaaaaaacgatttatgaagataca 8057090  T
Q  386 a 386  Q
    |    
T  8057089 a 8057089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 11298741 - 11298697
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 329  Q
    |||||||||||| ||||  ||||||||||||||||| ||||||||    
T  11298741 tttgagcttatgaaaaatagcttatgcaaataaataaacttttat 11298697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 4026910 - 4027025
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 384  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||||| ||| |||||| | ||||||||||||||||||||||||||||||||||||||    
T  4026910 tttgagcttatgcaaaactgcttatgcaaataaataagcttttatgtattat-cataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatac 4027008  T
Q  385 aaatttcgttagtgaga 401  Q
    || ||| ||||||||||    
T  4027009 aatttttgttagtgaga 4027025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 264 - 401
Target Start/End: Original strand, 38215986 - 38216119
Alignment:
Q  264 gcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga 363  Q
    |||||||||||||||||| | |||||||||||||||||  |||||||||||||||||     ||||||| |||||||||| | |||||||||||||| ||    
T  38215986 gcccgtttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataa----ttatgtattattcataagcttgtcaaggtagtttagga 38216081  T
Q  364 aaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||| ||| ||||||||||||| ||||||||||||||    
T  38216082 aaaaatagcatatgaagatacaattttcgttagtgaga 38216119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 261 - 401
Target Start/End: Original strand, 29774705 - 29774845
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    ||||||||||||| ||| ||| | ||| |||||||||| ||   |||||||||||||||| ||||||||| | ||||||| |||| || |||||||||||    
T  29774705 agggcccgtttgggttgtcttattttttagcttatgcataacaacttatgcaaataaataaacttttatgcattattcattagtttgttaaggtagttta 29774804  T
Q  361 tgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||| ||||||||| |||||| ||||||||||||||    
T  29774805 tgaaaaaacggcttatgaaaatacaattttcgttagtgaga 29774845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 285 - 401
Target Start/End: Complemental strand, 33321414 - 33321298
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 384  Q
    |||||||||||||||||   ||| ||||||||||||  |||||||||  |||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  33321414 tttgagcttatgcaaaacaacttgtgcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatac 33321315  T
Q  385 aaatttcgttagtgaga 401  Q
    || ||| ||||||||||    
T  33321314 aatttttgttagtgaga 33321298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 260 - 401
Target Start/End: Complemental strand, 25836839 - 25836698
Alignment:
Q  260 tagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 359  Q
    |||||||| |||| |||| ||| | ||||||| |  ||||||  |||||||||||||||||  |||||||||| |||||||||| | |||||||||||||    
T  25836839 tagggcccatttgaattgccttatttttgagcctgcgcaaaacagcttatgcaaataaatatgcttttatgtattattcataagcttgtcaaggtagttt 25836740  T
Q  360 atgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||| ||||||||||| |||| | ||||||||||||    
T  25836739 atgaaaaaacggcttatgaagacacaattatcgttagtgaga 25836698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 264 - 395
Target Start/End: Original strand, 4090452 - 4090583
Alignment:
Q  264 gcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga 363  Q
    |||||| || |||| ||| | |||||||||||||||||  ||||||||||||||||| ||||| ||||| |||||||||  | |||||||||||  ||||    
T  4090452 gcccgtctgaattggcttatttttgagcttatgcaaaacagcttatgcaaataaataaactttgatgtattattcataatcttgtcaaggtagtcaatga 4090551  T
Q  364 aaaaacagcttatgaagatacaaatttcgtta 395  Q
    |||||||||||| |||||||||| ||||||||    
T  4090552 aaaaacagcttacgaagatacaattttcgtta 4090583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 4702799 - 4702696
Alignment:
Q  11 catagggcatacttgaccactcagatttccttttctttttgcatatggcagaatcagcctctgacatcttgctattccac--tgtttcactaaacaatgc 108  Q
    |||| |||||| ||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||| |||||||||||||    
T  4702799 cataaggcatatttgaccactctccattccttttctttttgcatatggcagaatcagcctctgacatcttgctattccgctttgttgcactaaacaatgc 4702700  T
Q  109 aaat 112  Q
    ||||    
T  4702699 aaat 4702696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 21788441 - 21788557
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 384  Q
    |||||| ||||||||||   ||||||||||||||||  ||||||| || |||||||||| | || ||| ||||||||||||||||| ||||||||||||     
T  21788441 tttgagtttatgcaaaacatcttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttatgaaaaaacaacttatgaagataa 21788540  T
Q  385 aaatttcgttagtgaga 401  Q
    || ||||||||||||||    
T  21788541 aattttcgttagtgaga 21788557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 268 - 386
Target Start/End: Complemental strand, 2790190 - 2790071
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaataga-cttttatgtactattcataagttggtcaaggtagtttatgaaaa 366  Q
    |||||| ||| ||| | |||||||||||||||||  ||||||||||||||||| | |||||||| | |||| ||||| | ||||||||| |||||||| |    
T  2790190 gtttgggttggcttatttttgagcttatgcaaaacagcttatgcaaataaataaagcttttatgcattattgataagcttgtcaaggtattttatgaata 2790091  T
Q  367 aacagcttatgaagatacaa 386  Q
    ||||||||||||||||||||    
T  2790090 aacagcttatgaagatacaa 2790071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 376
Target Start/End: Complemental strand, 34913491 - 34913401
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttat 376  Q
    ||||||||||||||||  |||||||||||||||||  |||||||||| |||||||||||| || ||| ||||||||||||||||| |||||    
T  34913491 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagtttatgaaaaaacaacttat 34913401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 261 - 401
Target Start/End: Complemental strand, 755867 - 755727
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    |||||||||||||||||  || | |||||||||||||||||   |||| |||||||| ||  |||||||||| |||||| ||| | || | |||||||||    
T  755867 agggcccgtttggattggatttt-tttgagcttatgcaaaacaacttacgcaaataattaagcttttatgtattattcagaagcttgttacggtagttta 755769  T
Q  361 tgaa-aaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||| |||||||||||||||||||||| ||| ||||||||||    
T  755768 tgaaaaaaacagcttatgaagatacaatttttgttagtgaga 755727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 324 - 401
Target Start/End: Complemental strand, 36501578 - 36501501
Alignment:
Q  324 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| || || |||||||||||    
T  36501578 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgaga 36501501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 4004823 - 4004919
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||  ||||||||||||||||||||| |  | || |||||||||||||| ||| ||||||||| ||||| ||||||||||||||    
T  4004823 cttatgcaaataaataatcttttatgtactattcataagctttttaaagtagtttatgaaaatacaacttatgaagctacaattttcgttagtgaga 4004919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 258 - 372
Target Start/End: Complemental strand, 33321532 - 33321418
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 357  Q
    ||||||||| |||| ||||||||| | ||| |||||||||||||   ||||||||||||| ||   ||||||||| || ||||||| | |||||||||||    
T  33321532 tttagggcctgtttcgattgacttattttttagcttatgcaaaacaacttatgcaaataattaagtttttatgtattactcataagcttgtcaaggtagt 33321433  T
Q  358 ttatgaaaaaacagc 372  Q
    |||||||||||||||    
T  33321432 ttatgaaaaaacagc 33321418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 304 - 396
Target Start/End: Original strand, 887415 - 887507
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttag 396  Q
    |||||||||||||||||  ||||| |||| |||||||||| | |||||||||||||||| |||| | |||||||||||||||| |||| ||||    
T  887415 gcttatgcaaataaataagcttttttgtattattcataagcttgtcaaggtagtttatgtaaaacctgcttatgaagatacaattttcattag 887507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 401
Target Start/End: Original strand, 11776944 - 11777084
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    |||||| |||||||||||||| | ||  |||  ||| ||||  ||||||||| |||||||  |||||||||| |||| ||||| | || ||| |||||||    
T  11776944 agggcctgtttggattgacttattttaaagcgcatgtaaaacagcttatgcatataaataagcttttatgtattatttataagcttgttaagttagttta 11777043  T
Q  361 tgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||| ||||||||||||||||||  ||| ||||||||||    
T  11777044 tgaaaacacagcttatgaagatacactttttgttagtgaga 11777084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 395
Target Start/End: Complemental strand, 13056425 - 13056319
Alignment:
Q  289 agcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaat 388  Q
    |||| ||||||||  | ||||||||||| |||  |||||||||| | |||||||| | ||||||||||||||| |||||| ||||||||||||| ||| |    
T  13056425 agctcatgcaaaacggattatgcaaatagataagcttttatgtatttttcataagcttgtcaaggtagtttataaaaaaatagcttatgaagatgcaatt 13056326  T
Q  389 ttcgtta 395  Q
    |||||||    
T  13056325 ttcgtta 13056319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 401
Target Start/End: Complemental strand, 38471919 - 38471777
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    |||||||  |||||||||  ||| | || ||||||||||||||  |||||||||||||||||  |||||||||  |||  ||||| |  |  | ||||||    
T  38471919 ttagggcttgtttggattagcttattttcgagcttatgcaaaacagcttatgcaaataaatatgcttttatgtgttatgtataagcttcttgatgtagtt 38471820  T
Q  359 tatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||    
T  38471819 tatgaaaaaacagtttatgaaggtacaattttcgttagtgaga 38471777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 12223855 - 12223952
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||| ||||||||| ||  |||| ||||| ||||||||||   ||||||||||||||||||||||||| |||||||||||| | |||| |||||||||    
T  12223855 gcttttgcaaataagtaacctttcatgtattattcataagcctgtcaaggtagtttatgaaaaaacagtttatgaagataccattttcattagtgaga 12223952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 29133769 - 29133659
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 384  Q
    |||||||||||  ||||  | |||||||||||||||  |||||||||| |||||||||||| ||||  || |||| || |||||||| |||| |||||||    
T  29133769 tttgagcttatataaaatagtttatgcaaataaataatcttttatgtattattcataagtttgtcactgtggtttgtggaaaaacagtttataaagatac 29133670  T
Q  385 aaatttcgtta 395  Q
    || ||||||||    
T  29133669 aattttcgtta 29133659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 2757202 - 2757087
Alignment:
Q  254 tagctttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaagg 353  Q
    |||||| |||||| |||||||||||||| | || ||||||||  ||||  ||||||||||||||||| | ||||||||| |||| |||||||  | || |    
T  2757202 tagcttgagggccagtttggattgacttattttagagcttatataaaacagcttatgcaaataaata-agttttatgtattatttataagtt-tttaaag 2757105  T
Q  354 tagtttatgaaaaaacag 371  Q
    ||||||||||||||||||    
T  2757104 tagtttatgaaaaaacag 2757087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 5516059 - 5516176
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatgaagata 383  Q
    ||||||||| |||||||  ||||||| ||| |||||  ||| |||||  |||||||||||| || || |||||||||| ||||||||| |||| || |||    
T  5516059 tttgagcttttgcaaaacagcttatgtaaaaaaataagcttctatgtgttattcataagtttgtaaatgtagtttatgaaaaaaacagtttataaaaata 5516158  T
Q  384 caaatttcgttagtgaga 401  Q
    ||| ||||||||||||||    
T  5516159 caattttcgttagtgaga 5516176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 401
Target Start/End: Original strand, 5903500 - 5903633
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 367  Q
    ||||| || ||||| | |||||||| ||||||||   |||||||||||||| |  | ||  |||| || ||||||| | ||||| |||||| ||||||||    
T  5903500 gtttgaatcgacttatttttgagctaatgcaaaacaacttatgcaaataaacaagcattagtgtattactcataagcttgtcaaagtagttaatgaaaaa 5903599  T
Q  368 acagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||| ||||||||||||||| ||| ||||||||||    
T  5903600 acatcttatgaagatacaatttttgttagtgaga 5903633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 381
Target Start/End: Original strand, 13097874 - 13097998
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaataga-cttttatgtacta-ttcataagttggtcaaggtag 356  Q
    |||||||| |||||||||| ||| | |||||||||||||||||  ||||||| ||| ||| | | |||| ||||| || |||||||| | ||||| || |    
T  13097874 ttagggcctgtttggattggcttatttttgagcttatgcaaaacagcttatggaaaaaaaaaaagctttgatgtattatttcataagcttgtcaaagttg 13097973  T
Q  357 tttatgaaaaaacagcttatgaaga 381  Q
    |||||||||||||| ||||||||||    
T  13097974 tttatgaaaaaacaacttatgaaga 13097998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 32366154 - 32366245
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||||||||||||   ||||||||| |||| |||||||  | |||||||||||||||||||||| ||||||| |||| | ||||||||||    
T  32366154 cttatgcaaataaataagtttttatgtattatttataagttt-taaaggtagtttatgaaaaaacagtttatgaatatacgattttcgttagt 32366245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 396
Target Start/End: Complemental strand, 42839383 - 42839312
Alignment:
Q  324 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttag 396  Q
    ||||||||| |||||||||||| |||||| ||||||||| |||| |||||||||||||| ||| |||||||||    
T  42839383 ttttatgtattattcataagtttgtcaagttagtttatg-aaaaccagcttatgaagatgcaattttcgttag 42839312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 386
Target Start/End: Complemental strand, 43787884 - 43787804
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 386  Q
    |||| |||||||||| ||||||||||| |||||||||  | ||  |||||| ||||||||||||| |||||||||||||||    
T  43787884 ttatacaaataaataaacttttatgtattattcataaacttgtttaggtagcttatgaaaaaacaacttatgaagatacaa 43787804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 397
Target Start/End: Complemental strand, 32522174 - 32522036
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 357  Q
    ||||||| |||||||||||   || | || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||| ||  | ||||||||    
T  32522174 tttagggtccgtttggattagtttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagt 32522076  T
Q  358 ttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||| | |||||||||||| ||||||||||    
T  32522075 ttatgaaaaaacagttcatgaagatacaattttcgttagt 32522036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 395
Target Start/End: Original strand, 37409603 - 37409737
Alignment:
Q  261 agggcccgtttggatt-gacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 359  Q
    |||||||||||||||| | ||| | ||||||| |||||||||   ||||||||||||||||  |||||| ||| |||||   |||| ||||| |||||||    
T  37409603 agggcccgtttggattagtcttat-tttgagcgtatgcaaaacaacttatgcaaataaataagcttttaagtattattctctagtttgtcaatgtagttt 37409701  T
Q  360 atgaaaaaacagcttatgaagatacaaatttcgtta 395  Q
    |||||||||||  ||||||| |||||| ||| ||||    
T  37409702 atgaaaaaacaatttatgaaaatacaatttttgtta 37409737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 401
Target Start/End: Original strand, 39592270 - 39592349
Alignment:
Q  322 acttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||| | |||||||||| | |||||||||||||||||||| | |||||| ||||||| || |||| |||||||||    
T  39592270 acttttatgcattattcataagcttgtcaaggtagtttatgaaaataaagcttaagaagatataattttctttagtgaga 39592349  T

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Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 12442835 - 12442897
Alignment:
Q  323 cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 385  Q
    |||||| ||| |||||||||| | |||||| |||||||||||||| |||||||||||||||||    
T  12442835 cttttaggtattattcataagcttgtcaagatagtttatgaaaaagcagcttatgaagataca 12442897  T

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Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 379
Target Start/End: Complemental strand, 30995984 - 30995908
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactatt---cataagttggtcaaggtagtttatgaaaaaacagcttatgaa 379  Q
    |||| |||||||||| ||||||||||| ||||   ||||||||| ||||| ||||||||||||||| ||||||||||    
T  30995984 ttatacaaataaataaacttttatgtattattattcataagttgatcaagatagtttatgaaaaaatagcttatgaa 30995908  T

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Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 755612 - 755684
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    |||||||| |||||||| ||||| |||||||||||||| ||||  ||||||||||||||| |  |||||||||    
T  755612 ttagggcctgtttggatcgacttatctttgagcttatgaaaaatagcttatgcaaataaagaagcttttatgt 755684  T

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Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 397
Target Start/End: Complemental strand, 2401747 - 2401612
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    ||||| ||||||||||  ||| | || ||||||||  ||||  ||||||||||||||||| | ||||||||| | || |||||||  | |||||||||||    
T  2401747 agggctcgtttggattagcttattttagagcttatataaaacagcttatgcaaataaatatatttttatgtattgtttataagtt-tttaaggtagttta 2401649  T
Q  361 tgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||||  | ||||||| |||||| ||| ||||||    
T  2401648 tgaaaaaatgggttatgaaaatacaatttttgttagt 2401612  T

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Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 7481021 - 7480889
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtact----attcataagttggtcaaggtagtttatga 363  Q
    |||||||| ||||| | ||||| |||||||||||   ||||||||||||||||   |||||| || |    ||||||||||| || |||||||||||| |    
T  7481021 gtttggatcgacttatttttgaacttatgcaaaacaacttatgcaaataaataatattttatatattattcattcataagtttgtgaaggtagtttat-a 7480923  T
Q  364 aaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||| |||| |||||||||| |||| |||||    
T  7480922 aaaaacaacttaggaagatacaattttcattagt 7480889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 397
Target Start/End: Complemental strand, 22898438 - 22898347
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||| | ||||||||| |||| |||| ||  | |||||||||||||||||||  | ||||||| |||||| ||||||||||    
T  22898438 cttatgcaaataaatacatttttatgtattatttataaattttt-aaggtagtttatgaaaaaatgggttatgaaaatacaattttcgttagt 22898347  T

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Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 12238566 - 12238476
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||||  | || ||||| |||| ||||| | || |||||||||||||||||||   |||||||| |||||| ||||||||||    
T  12238566 gcttatgcaaataaataagcattaatgtattatttataagcttgttaaggtagtttatgaaaaaa---cttatgaacatacaattttcgttagt 12238476  T

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Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 401
Target Start/End: Complemental strand, 12683687 - 12683592
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||   ||| ||||| |||||||||| | ||||  | | |||| ||||||||||||||||||||||||| ||| |||| |||||    
T  12683687 ttatgcaaataaataagttttaatgtattattcataagcttgtcagagaaatttacgaaaaaacagcttatgaagatacaattttggttactgaga 12683592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 379
Target Start/End: Complemental strand, 27881096 - 27881005
Alignment:
Q  288 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaa 379  Q
    ||||||||||||||  |||||||||||||||||   | ||||||| |||| |||||||  | ||||||| |||||||||||||  |||||||    
T  27881096 gagcttatgcaaaatagcttatgcaaataaatatgttattatgtattatttataagtttattaaggtagcttatgaaaaaacaatttatgaa 27881005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 27703560 - 27703502
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataag 343  Q
    |||||||||||||||||  |||||||||||||||||  ||||||| || ||||||||||    
T  27703560 tttgagcttatgcaaaacagcttatgcaaataaataagcttttatatattattcataag 27703502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 33321215 - 33321285
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    ||||||| ||||||||| ||| | |||||||||||| ||||  ||||||||||||||||| || |||||||    
T  33321215 agggcccatttggattggcttatttttgagcttatgtaaaatagcttatgcaaataaataaacctttatgt 33321285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 4706141 - 4706069
Alignment:
Q  42 tttctttttgcatatggcagaatcagcctctgacatcttgctattccac--tgtttcactaaacaatgcaaat 112  Q
    |||| ||||||| |||||||||||| |||| ||||||||| ||||||||  ||||| ||||||||||| ||||    
T  4706141 tttcattttgcagatggcagaatcaacctccgacatcttggtattccactttgtttaactaaacaatgtaaat 4706069  T

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Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 399
Target Start/End: Original strand, 8832464 - 8832555
Alignment:
Q  311 caaataaatagacttttatgtactatt---cataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    ||||||||||  |||||||||| ||||   |||||| |  ||||||||||||||||||| |||| |||  ||||||||| ||||||||||||    
T  8832464 caaataaataagcttttatgtattattaatcataagcttttcaaggtagtttatgaaaacacaggttagaaagatacaattttcgttagtga 8832555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 331
Target Start/End: Complemental strand, 8832635 - 8832570
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    |||||||||||||||| | ||| |||||||| ||||  |||||||||||||||||  |||||||||    
T  8832635 ccgtttggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgt 8832570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 382
Target Start/End: Complemental strand, 9140831 - 9140735
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagat 382  Q
    ||||||||||| |||||   | ||||||||||||||  |||||||||| || ||||||  | ||||| |||||||||| |||||||| ||||||||||    
T  9140831 tttgagcttatacaaaacatcgtatgcaaataaataaccttttatgtatta-tcataaacttgtcaatgtagtttatgtaaaaacagtttatgaagat 9140735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 395
Target Start/End: Complemental strand, 16108175 - 16108114
Alignment:
Q  334 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 395  Q
    |||| ||||||| || ||||||||||||||||||||| |||||||| |||||| ||| ||||    
T  16108175 tatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgtta 16108114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 4533506 - 4533446
Alignment:
Q  260 tagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    ||||| ||||||||||| |||| | |||||||||||| ||||  |||||||||||||||||    
T  4533506 tagggtccgtttggattaacttatttttgagcttatgaaaaatagcttatgcaaataaata 4533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 8441460 - 8441536
Alignment:
Q  288 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 364  Q
    |||||||||||||   |||||||||||||||||   ||||||||| |||| ||||||| || || ||||||||||||    
T  8441460 gagcttatgcaaagcagcttatgcaaataaatatgtttttatgtattatttataagtttgttaatgtagtttatgaa 8441536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 365
Target Start/End: Complemental strand, 41554662 - 41554602
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    ||||| |||||||||| ||||||||||| ||||||||| || || || |||||||||||||    
T  41554662 cttatacaaataaataaacttttatgtattattcataaatttgttaaagtagtttatgaaa 41554602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 401
Target Start/End: Original strand, 42382684 - 42382720
Alignment:
Q  365 aaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||| ||||||||||||||||||    
T  42382684 aaaacagcttatgaagatgcaaatttcgttagtgaga 42382720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 364
Target Start/End: Complemental strand, 37420089 - 37419987
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    ||||||| ||||||||| ||| | ||| |||||||| ||||    |||||||||||||||  |||||||||   |||||||| || ||||||||||||||    
T  37420089 agggcccatttggattggcttattttttagcttatgaaaaataatttatgcaaataaataagcttttatgtta-attcataattttgtcaaggtagttta 37419991  T
Q  361 tgaa 364  Q
    ||||    
T  37419990 tgaa 37419987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 36501418 - 36501488
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    |||||| |||||||||| ||| | ||||||||| || ||||  |||||||||||||||||  |||||||||    
T  36501418 agggcctgtttggattggcttatttttgagcttgtgaaaaatagcttatgcaaataaataagcttttatgt 36501488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 298
Target Start/End: Original strand, 9140647 - 9140684
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgca 298  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  9140647 agggcccgtttggattgacttatttttgagcttatgca 9140684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 370
Target Start/End: Original strand, 11072911 - 11073015
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtact-attcataagttggtcaaggtagtttatgaa 364  Q
    |||||||||||| ||| | ||| || |||||| |||  |||||| |||| |||||  ||||| |||| | ||||||||| | ||||||||||||||||||    
T  11072911 ccgtttggattggcttattttttag-ttatgctaaacagcttatccaaacaaataagcttttttgtattcattcataagcttgtcaaggtagtttatgaa 11073009  T
Q  365 aaaaca 370  Q
    ||||||    
T  11073010 aaaaca 11073015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 17546473 - 17546522
Alignment:
Q  350 aaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    ||||||||||||||||||||| |||||||| |||  | ||||||||||||    
T  17546473 aaggtagtttatgaaaaaacaacttatgaatatatcattttcgttagtga 17546522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 364
Target Start/End: Original strand, 40301314 - 40301414
Alignment:
Q  263 ggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg 362  Q
    ||||||||||||||  ||| | || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||||||  | |||||||||||||    
T  40301314 ggcccgtttggattagcttattttagagcttataaaaaacagcttatgcaaataaataagtttttatgtattatttataagtt-tttaaggtagtttatg 40301412  T
Q  363 aa 364  Q
    ||    
T  40301413 aa 40301414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 330
Target Start/End: Complemental strand, 5903801 - 5903729
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatg 330  Q
    |||||| || |||||||||| ||| | |||||||| ||| ||||  |||||||||||||||||  ||||||||    
T  5903801 tttaggacctgtttggattggcttatttttgagctcatgaaaaatagcttatgcaaataaataagcttttatg 5903729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 345
Target Start/End: Original strand, 25836617 - 25836698
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 345  Q
    ||||| |||||||| ||||| | |||||||||||| | ||   ||||||||||||||||  |||||||||  ||||||||||||    
T  25836617 gggcctgtttggatcgacttatttttgagcttatgaagaataccttatgcaaataaataagcttttatgt--tattcataagtt 25836698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 9e-34; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 268 - 401
Target Start/End: Original strand, 38372525 - 38372658
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 367  Q
    |||||||||||||| | |||||||||||||||||  |||||||||||||||||  || ||||||| |||||||||||| |||||||||||||| ||||||    
T  38372525 gtttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaaa 38372624  T
Q  368 acagcttatgaagatacaaatttcgttagtgaga 401  Q
     ||||| | ||||| |||| ||||||||||||||    
T  38372625 gcagctcaagaagaaacaattttcgttagtgaga 38372658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 29378648 - 29378741
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||||  |||||||||| |||| || |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29378648 gcttatgcaaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagt 29378741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 384
Target Start/End: Original strand, 30181516 - 30181633
Alignment:
Q  267 cgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 366  Q
    ||||||||||||||| | ||||||||||||||| |   |||| ||||||||| |  |||||||||| |||||||||| | ||||||||||||||| ||||    
T  30181516 cgtttggattgacttatttttgagcttatgcaatacaacttaggcaaataaagaagcttttatgtattattcataagcttgtcaaggtagtttatcaaaa 30181615  T
Q  367 aacagcttatgaagatac 384  Q
    ||||||||||||||||||    
T  30181616 aacagcttatgaagatac 30181633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 264 - 401
Target Start/End: Original strand, 34922894 - 34923033
Alignment:
Q  264 gcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat-- 361  Q
    |||||||||||||| ||| | ||| |||| | ||||||   ||||||||||||||||  |||||||||| |||||||||||| |||||||||||||||      
T  34922894 gcccgtttggattggcttatttttcagctaacgcaaaacaacttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttataa 34922993  T
Q  362 gaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
     |||||||||||| ||||||||||  ||||||||||||||    
T  34922994 aaaaaaacagcttgtgaagatacacttttcgttagtgaga 34923033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 386
Target Start/End: Complemental strand, 44613574 - 44613474
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 385  Q
    ||||||||||||||||  |||||||||||||||||  ||||||| || |||||||||| | || ||||||||||||||||||||| ||||||| ||||||    
T  44613574 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgacgataca 44613475  T
Q  386 a 386  Q
    |    
T  44613474 a 44613474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 266 - 397
Target Start/End: Original strand, 22575551 - 22575682
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    ||||||||||| |||| | || ||||||||| ||||   ||||||||||||||||   ||||||||| |||| ||||||| || ||| || |||||||||    
T  22575551 ccgtttggattaacttattttagagcttatgtaaaacatcttatgcaaataaatacgtttttatgtattatttataagtttgttaagatattttatgaaa 22575650  T
Q  366 aaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||| |||||||||||||| ||||||||||    
T  22575651 aaacagtttatgaagatacaattttcgttagt 22575682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 266 - 396
Target Start/End: Complemental strand, 29390671 - 29390542
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    |||||||||||| ||| | |||||| ||||| ||||   ||||||||||||||||  |||| ||||| |||||||||| | || |||||||||||||| |    
T  29390671 ccgtttggattggcttatttttgagtttatggaaaacaacttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttatga-a 29390573  T
Q  366 aaacagcttatgaagatacaaatttcgttag 396  Q
    ||||| ||||||||||||||| |||||||||    
T  29390572 aaacaacttatgaagatacaattttcgttag 29390542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 266 - 407
Target Start/End: Complemental strand, 22319412 - 22319271
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    |||||||||||| ||| | || ||| ||||||||| | | ||||||||||||||| || || ||||| |||||||||||| || ||  ||||||||||||    
T  22319412 ccgtttggattggcttattttagagtttatgcaaagaggtttatgcaaataaataaacattaatgtattattcataagtttgttaacatagtttatgaaa 22319313  T
Q  366 aaacagcttatgaagatacaaatttcgttagtgagacattat 407  Q
     |||| |||||||| |||||| |||||||||| ||| |||||    
T  22319312 caacaacttatgaatatacaattttcgttagtaagatattat 22319271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 400
Target Start/End: Complemental strand, 19308593 - 19308478
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 384  Q
    |||||||| |||| ||| |||||||| ||||||||| | ||| ||||| |||||||||||| || | ||||||||||||||||  ||||||||||||| |    
T  19308593 tttgagctaatgcgaaactgcttatgaaaataaataaaatttcatgtattattcataagtttgttagggtagtttatgaaaaattagcttatgaagatcc 19308494  T
Q  385 aaatttcgttagtgag 400  Q
    || ||| |||||||||    
T  19308493 aatttttgttagtgag 19308478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 364
Target Start/End: Complemental strand, 40629542 - 40629440
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    |||||| |||||||||| ||| | |||||||||||||||||  |||||| |||||||||| || |||||||| |||||||||| | ||||||||||||||    
T  40629542 agggcctgtttggattggcttatttttgagcttatgcaaaacagcttatccaaataaataaac-tttatgtattattcataagcttgtcaaggtagttta 40629444  T
Q  361 tgaa 364  Q
    ||||    
T  40629443 tgaa 40629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 47511046 - 47511133
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttc 391  Q
    |||||||||||||||||  |||||||||| |||||||||| | || |||| ||| |||||||||||||||||||||||||||| ||||    
T  47511046 gcttatgcaaataaataagcttttatgtattattcataagcttgttaaggaagtctatgaaaaaacagcttatgaagatacaattttc 47511133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 397
Target Start/End: Original strand, 16958775 - 16958911
Alignment:
Q  260 tagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 359  Q
    |||||| ||||||||||  ||| | |||||||||||  ||||   ||||||||| |||||| | ||||||||| |||| |||||||  | ||||||||||    
T  16958775 tagggctcgtttggattagcttatttttgagcttatataaaacaacttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagttt 16958873  T
Q  360 atgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||| | |||||||||||||| ||||||||||    
T  16958874 atgaaaaaaccgtttatgaagatacaattttcgttagt 16958911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 41677378 - 41677475
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa-cagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||| | ||||||||| |||||||||||| ||||| ||||||||| |||||| ||| |||||||||||||| ||| ||| ||||||    
T  41677378 cttatgcaaataaataaatttttatgtattattcataagtttgtcaatgtagtttattaaaaaaccagattatgaagatacaattttagtttgtgaga 41677475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 397
Target Start/End: Complemental strand, 16933058 - 16932920
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 357  Q
    |||||||| ||||||||||  ||| | |||||||||||  ||||   ||||||||| |||||| | ||||||||| |||| |||||||  | ||||||||    
T  16933058 tttagggctcgtttggattagcttatttttgagcttatataaaataacttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagt 16932960  T
Q  358 ttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||||||||   |||||||||||||| ||||||||||    
T  16932959 ttatgaaaaaaccatttatgaagatacaattttcgttagt 16932920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 397
Target Start/End: Complemental strand, 16938441 - 16938303
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 357  Q
    |||||||| ||||||||||  ||| | |||||||||||  ||||   ||||||||| |||||| | ||||||||| |||| |||||||  | ||||||||    
T  16938441 tttagggctcgtttggattagcttatttttgagcttatataaaataacttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagt 16938343  T
Q  358 ttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||||||||   |||||||||||||| ||||||||||    
T  16938342 ttatgaaaaaaccatttatgaagatacaattttcgttagt 16938303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 396
Target Start/End: Complemental strand, 14676087 - 14675951
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 357  Q
    |||||||||||||||||||  ||| | || ||||||||  ||||   |||||||||||||||||   |||||||| |||| |||||||  | ||||||||    
T  14676087 tttagggcccgtttggattagcttat-ttagagcttatataaaacaacttatgcaaataaataggtgtttatgtattatttataagttttt-aaggtagt 14675990  T
Q  358 ttatgaaaaaacagcttatgaagatacaaatttcgttag 396  Q
    |||||||||||||| |||||||||||||| |||| ||||    
T  14675989 ttatgaaaaaacagtttatgaagatacaattttcattag 14675951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 401
Target Start/End: Complemental strand, 37779405 - 37779268
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    |||||| || ||||||||| ||| | ||| ||||||| |||||  |||||||||||||||||  |||||||      |||||||| | ||||||||||||    
T  37779405 ttaggggccatttggattggcttattttt-agcttatacaaaacagcttatgcaaataaataagcttttat------ttcataagcttgtcaaggtagtt 37779313  T
Q  359 tatgaaaaaa--cagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||  ||||||||||| |||||| ||||||||||||||    
T  37779312 tatgaaaaaaaacagcttatgaaaatacaactttcgttagtgaga 37779268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 309 - 401
Target Start/End: Complemental strand, 14691378 - 14691285
Alignment:
Q  309 tgcaaataaataga-cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||| | |||||||||| |||||||||| | ||||| ||| ||||||||||||||  ||||||||||| || ||||||||||||||    
T  14691378 tgcaaataaataaagcttttatgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtgaga 14691285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 266 - 369
Target Start/End: Complemental strand, 7098221 - 7098118
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    |||||||||||||||| | || |||||| |||||||  | |||| ||||||||||   ||||||| | |||||||||||| |||||| ||||||||||||    
T  7098221 ccgtttggattgacttgttttcgagcttgtgcaaaatagtttatacaaataaataagattttatgaattattcataagtttgtcaagatagtttatgaaa 7098122  T
Q  366 aaac 369  Q
    ||||    
T  7098121 aaac 7098118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 285 - 399
Target Start/End: Complemental strand, 23120022 - 23119908
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 384  Q
    |||||||||||||||||   | ||||||||||||||  |||| | ||| |||||||||||| ||||| |||||||| |||| ||||| || |||||||||    
T  23120022 tttgagcttatgcaaaacaacctatgcaaataaataatctttaaagtattattcataagtttgtcaatgtagtttaagaaataacagtttgtgaagatac 23119923  T
Q  385 aaatttcgttagtga 399  Q
    || ||| ||| ||||    
T  23119922 aatttttgttcgtga 23119908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 400
Target Start/End: Original strand, 14593142 - 14593250
Alignment:
Q  295 tgcaaaaatgcttatgcaaataaatagacttttatgtactattcata--agttggtcaaggtagtttatgaaaaaa-cagcttatgaagatacaaatttc 391  Q
    |||||||  ||||||||||||||||| |  |||||||| ||||||||  || | ||||| |||||||||||||||| | |||| ||||||||||| ||||    
T  14593142 tgcaaaatagcttatgcaaataaataaaagtttatgtattattcatataagcttgtcaaagtagtttatgaaaaaaactgcttgtgaagatacaattttc 14593241  T
Q  392 gttagtgag 400  Q
    |||||||||    
T  14593242 gttagtgag 14593250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 401
Target Start/End: Original strand, 22032749 - 22032862
Alignment:
Q  288 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaa 387  Q
    ||||||||| ||||   ||||||||||||||||   ||||||||| |||| |||||   || || ||||||||||||||||||  |||||||| |||||     
T  22032749 gagcttatgtaaaacaacttatgcaaataaatatgtttttatgtattatttataagcatgttaatgtagtttatgaaaaaacaatttatgaaggtacaat 22032848  T
Q  388 tttcgttagtgaga 401  Q
    ||||||||||||||    
T  22032849 tttcgttagtgaga 22032862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 397
Target Start/End: Original strand, 41094223 - 41094312
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||  | |||||||| || ||||||| | |||||||| ||||||||||||  | ||||||||||||||| ||||||||||    
T  41094223 ttatgcaaataaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaa--aacttatgaagatacaattttcgttagt 41094312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 401
Target Start/End: Original strand, 17944686 - 17944753
Alignment:
Q  334 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||| | |||||||||||||||  ||||||| |||||||||||||||||| | |||||||||    
T  17944686 tattcataagcttgtcaaggtagtttatagaaaaacaacttatgaagatacaaattacattagtgaga 17944753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 401
Target Start/End: Complemental strand, 6406912 - 6406858
Alignment:
Q  347 gtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||| || |||||    
T  6406912 gtcaaggtagtttatgaaaaaacagcttatgaagatgcaattttcgctaatgaga 6406858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 391
Target Start/End: Original strand, 20888578 - 20888664
Alignment:
Q  306 ttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttc 391  Q
    |||||||||||||||  ||||| ||||| |||||||||| | |  |||||||||||||||||||||  |||||||||||||| ||||    
T  20888578 ttatgcaaataaataagctttttatgtattattcataagcttgcaaaggtagtttatgaaaaaacaatttatgaagatacaattttc 20888664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 401
Target Start/End: Original strand, 46744003 - 46744053
Alignment:
Q  351 aggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  46744003 aggtagttaatgaaaaaacagcatatgaagatacaattttcgttagtgaga 46744053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 23356573 - 23356477
Alignment:
Q  305 cttatgcaaataaata-gacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||| ||||||||| | ||||| |||| |||||| ||||| ||||||||| ||||||||||||||| ||||||| |||| | ||| ||||||||||    
T  23356573 cttatgaaaataaataaggctttt-tgtattattcacaagtttgtcaaggtaatttatgaaaaaacagtttatgaaaatactatttttgttagtgaga 23356477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 401
Target Start/End: Complemental strand, 47654513 - 47654400
Alignment:
Q  288 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaa 387  Q
    |||||| |||||||  ||||||| |||||||||  |  | ||||| |||  ||||| | || || ||||||||||||||||||| |||||||| |||||     
T  47654513 gagcttttgcaaaacagcttatgtaaataaatatgccctgatgtattatatataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtacaat 47654414  T
Q  388 tttcgttagtgaga 401  Q
    ||||||||||||||    
T  47654413 tttcgttagtgaga 47654400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 399
Target Start/End: Original strand, 16012744 - 16012796
Alignment:
Q  347 gtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    ||||| ||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  16012744 gtcaaagtagtttatgaaaaaactgcttctgaagatacaattttcgttagtga 16012796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 19913949 - 19914041
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||| ||||||||| | |||||||| ||||| |||| || || || ||||||||||||||||| | ||||||||| | || ||||||||||    
T  19913949 cttatgtaaataaataaatttttatgtgctatttataaatttgttaatgtagtttatgaaaaaacggtttatgaagagataattttcgttagt 19914041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 383
Target Start/End: Original strand, 14536905 - 14536964
Alignment:
Q  324 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 383  Q
    ||||||||| |||||||||| | |||||| |||||||||||||||||  |||||||||||    
T  14536905 ttttatgtattattcataagattgtcaagatagtttatgaaaaaacactttatgaagata 14536964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 29378828 - 29378769
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    ||||||||||||||||||||| | |||||| ||||| ||||  |||||||||||||||||    
T  29378828 agggcccgtttggattgacttatttttgagtttatgaaaaatagcttatgcaaataaata 29378769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 392
Target Start/End: Original strand, 35809050 - 35809181
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    |||| |||||||||||| ||| | || |||||||| ||||    ||||||||||||||||  | || ||||| |||| ||||| | || || ||||||||    
T  35809050 agggtccgtttggattggcttattttagagcttatacaaagcatcttatgcaaataaataagcattaatgtattatttataagcttgttaacgtagttta 35809149  T
Q  361 tgaaaaaacagcttatgaagatacaaatttcg 392  Q
    |||||||||| |||| ||| |||||| |||||    
T  35809150 tgaaaaaacaacttaagaatatacaattttcg 35809181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 383
Target Start/End: Original strand, 43391725 - 43391803
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 383  Q
    |||||| ||||||||| |||| | | || |||||||||||| || ||||||||||||||||||| |  |||||||||||    
T  43391725 cttatgtaaataaataaacttatgtttattattcataagtttgttaaggtagtttatgaaaaaataatttatgaagata 43391803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 268 - 389
Target Start/End: Original strand, 18837189 - 18837315
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt--tatgaaa 365  Q
    |||||||||| ||| | |||||||||||||||||  || ||||||||||||||  ||| | |||| |||||||||| | || |||||| ||  ||  |||    
T  18837189 gtttggattggcttatttttgagcttatgcaaaacagcatatgcaaataaataagcttatgtgtattattcataagcttgtaaaggtacttaataaaaaa 18837288  T
Q  366 aaacagcttat---gaagatacaaatt 389  Q
    |||||||||||   |||||||||||||    
T  18837289 aaacagcttatcaagaagatacaaatt 18837315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 304 - 393
Target Start/End: Original strand, 28004587 - 28004675
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgt 393  Q
    |||||||||||||||||   ||||||||| |||| |||| ||  | ||| ||||||||||||||||   |||||||||||||||||||||    
T  28004587 gcttatgcaaataaataagtttttatgtattatttataatttttttaag-tagtttatgaaaaaaccatttatgaagatacaaatttcgt 28004675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 395
Target Start/End: Original strand, 39279462 - 39279523
Alignment:
Q  334 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 395  Q
    |||||||||| | || ||||| |||||||||||| ||||||| |||||||||| ||||||||    
T  39279462 tattcataagcttgttaaggtggtttatgaaaaatcagcttaggaagatacaattttcgtta 39279523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 48949769 - 48949818
Alignment:
Q  350 aaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    |||||||||||||||||||||| ||||||||||| ||  |||||||||||    
T  48949769 aaggtagtttatgaaaaaacagtttatgaagatataatattcgttagtga 48949818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 991504 - 991599
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||| |||||||   ||||||| | |||| |||||||  | ||||||||||||||||||||   |||||||||||||  ||||||||||||||    
T  991504 cttatgcacataaataagtttttatgcattatttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacacttttcgttagtgaga 991599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 401
Target Start/End: Original strand, 12473389 - 12473453
Alignment:
Q  337 tcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||| || || ||||||||||||||||||| |||| |||| |||| ||||||| ||||||    
T  12473389 tcataagtttgtaaatgtagtttatgaaaaaacagtttataaagaaacaattttcgtttgtgaga 12473453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 23137244 - 23137149
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||| |||| ||||| | ||||||||| |||| |||||||  | ||||||||||||| |||||  | |||||||||||||| |||| |||||||||    
T  23137244 cttatacaaacaaataaatttttatgtattatttataagttttt-aaggtagtttatgtaaaaatcgtttatgaagatacaattttcattagtgaga 23137149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 26331778 - 26331830
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    |||||||||||||| | |||||||||||||||||  ||||||| |||||||||    
T  26331778 gtttggattgacttatgtttgagcttatgcaaaatagcttatgtaaataaata 26331830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 400
Target Start/End: Original strand, 35246676 - 35246768
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgag 400  Q
    ||||||||||||||||   ||||||||| |||| | |||||  | ||||||||||||||||||||   |||||| ||||||| |||||||||||||    
T  35246676 cttatgcaaataaataagtttttatgtattatttaaaagttttt-aaggtagtttatgaaaaaac--tttatgaggatacaattttcgttagtgag 35246768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 401
Target Start/End: Complemental strand, 7774799 - 7774733
Alignment:
Q  334 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||| ||||||| ||||| ||| ||||||||||||||  |||||||||||||| ||||||| ||||||    
T  7774799 tatttataagtttgtcaacgtactttatgaaaaaacat-ttatgaagatacaattttcgttggtgaga 7774733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 22032948 - 22032886
Alignment:
Q  258 tttagggcccgtttggattga-cttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    |||||| |||||||||||||| ||| | |||||||||||| ||||| |||||||||||||||||    
T  22032948 tttaggccccgtttggattgagcttat-tttgagcttatgaaaaaaagcttatgcaaataaata 22032886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 331
Target Start/End: Original strand, 29390461 - 29390524
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    |||||||||||||| | |||||||||||| ||||  | |||||||||||||||  |||||||||    
T  29390461 gtttggattgacttatttttgagcttatgaaaaatagtttatgcaaataaataagcttttatgt 29390524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 394
Target Start/End: Complemental strand, 31613741 - 31613658
Alignment:
Q  311 caaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtt 394  Q
    |||||||||| | || |||||| ||||||| || | ||||| |||||||||||||||||| | |||||||| || | |||||||    
T  31613741 caaataaataaatttgtatgtattattcattagcttgtcaatgtagtttatgaaaaaacaacctatgaagaaaccattttcgtt 31613658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 35331102 - 35331161
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    |||||| |||||||||||||| | ||  |||||||||||||  |||||||||||||||||    
T  35331102 agggccagtttggattgacttattttgtagcttatgcaaaacagcttatgcaaataaata 35331161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 386
Target Start/End: Original strand, 14730019 - 14730049
Alignment:
Q  356 gtttatgaaaaaacagcttatgaagatacaa 386  Q
    |||||||||||||||||||||||||||||||    
T  14730019 gtttatgaaaaaacagcttatgaagatacaa 14730049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 386
Target Start/End: Complemental strand, 21027576 - 21027514
Alignment:
Q  324 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 386  Q
    ||||||||| |||| |||||||  | ||||| |||||||||||||||| || |||||||||||    
T  21027576 ttttatgtattatttataagtttattaaggtggtttatgaaaaaacagtttttgaagatacaa 21027514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 320
Target Start/End: Complemental strand, 25908476 - 25908418
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    |||||||||||||||| ||| | |||||| ||||| ||||  |||||||||||||||||    
T  25908476 gggcccgtttggattggcttatttttgaggttatgaaaaatggcttatgcaaataaata 25908418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 399
Target Start/End: Complemental strand, 48021749 - 48021636
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 384  Q
    ||||||||||| |||||    |||||||||||||||  || |||| || |||||||||| | || || ||||||||||| |||| | || ||||||||||    
T  48021749 tttgagcttatacaaaacaatttatgcaaataaataagctcttatttattattcataagcttgttaaagtagtttatga-aaaataactaatgaagatac 48021651  T
Q  385 aaatttcgttagtga 399  Q
    || |||| |||||||    
T  48021650 aattttcattagtga 48021636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 401
Target Start/End: Original strand, 48895264 - 48895401
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga---- 363  Q
    ||||||||| | || | |||||||||||||||||  | || ||||||||||||  | || || || |||||||||| |  ||||||||||||||||        
T  48895264 gtttggattaatttatttttgagcttatgcaaaaccgttt-tgcaaataaataagcattcatatattattcataagcttatcaaggtagtttatgagaca 48895362  T
Q  364 -aaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
     |||||||| |||||||||||||| ||| | ||||||||    
T  48895363 aaaaaacagtttatgaagatacaatttttgatagtgaga 48895401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 18765147 - 18765098
Alignment:
Q  353 gtagtttatgaaaaaac-agcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||| | ||||||||||||||| ||| ||||||||||    
T  18765147 gtagtttatgaaaaaactaacttatgaagatacaatttttgttagtgaga 18765098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 364
Target Start/End: Original strand, 19496325 - 19496422
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaataga-cttttatgtactattcataagttggtcaaggtagtttatgaa 364  Q
    ||||| |||||||||| ||||||||||| |||||   ||||| |||||||||| |  ||||||||  ||||||||||||  |||| ||| ||||||||    
T  19496325 gtttgaattgacttctttttgagcttatacaaaacaacttatacaaataaatatattttttatgtgttattcataagtttttcaatgtaatttatgaa 19496422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 21249147 - 21249200
Alignment:
Q  292 ttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 345  Q
    |||||||||| | ||||||||||||||||   ||||||||| ||||||||||||    
T  21249147 ttatgcaaaactacttatgcaaataaataagtttttatgtattattcataagtt 21249200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 401
Target Start/End: Complemental strand, 32917671 - 32917578
Alignment:
Q  308 atgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||   |||||||||  ||||||||| |  |||  || ||||| ||||||||| |||||||||||| || ||| ||||||||||    
T  32917671 atgcaaataaataagtttttatgtatcattcataagcttatcatagtggtttacgaaaaaacaacttatgaagatataatttttgttagtgaga 32917578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 12473190 - 12473250
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 345  Q
    |||||||||||||||||   |||||||||| |||||   ||||||||| ||||||||||||    
T  12473190 tttgagcttatgcaaaacaacttatgcaaacaaataagtttttatgtattattcataagtt 12473250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 331
Target Start/End: Complemental strand, 33205019 - 33204947
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    |||||| |||||||||||| ||| | ||| |||||||| ||||   ||||||||||||||||  |||||||||    
T  33205019 ttagggtccgtttggattggcttattttttagcttatgaaaaatatcttatgcaaataaataagcttttatgt 33204947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 368
Target Start/End: Original strand, 41037756 - 41037819
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 368  Q
    |||||||||||||||||  |||||||||| |||||| ||| | ||||||||| ||||||| ||||    
T  41037756 gcttatgcaaataaataagcttttatgtattattca-aagcttgtcaaggtaatttatgataaaa 41037819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 401
Target Start/End: Original strand, 44799368 - 44799502
Alignment:
Q  265 cccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 364  Q
    |||||||||||| |||| | || || |||||  ||||  | |||||||||||||||   |||||| || |||| |||||||  | |||||||||| ||||    
T  44799368 cccgtttggattaacttattttagaacttatataaaatagtttatgcaaataaataagtttttat-tattatttataagttttt-aaggtagtttttgaa 44799465  T
Q  365 aaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||| || ||||||||||| ||  |||||||||||||    
T  44799466 aaaatagtttatgaagatagaatattcgttagtgaga 44799502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 266 - 401
Target Start/End: Original strand, 4068080 - 4068215
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    |||||||||||| ||| | ||| ||||| |||||||  |||| ||||||||||||  |||||||||| |||||||||| | |||||||||||||||||||    
T  4068080 ccgtttggattggcttattttttagcttttgcaaaatagcttgtgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 4068179  T
Q  366 aaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||| ||||||||||||| | ||||||||||||||    
T  4068180 aaacaacttatgaagatactattttcgttagtgaga 4068215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 261 - 399
Target Start/End: Complemental strand, 26946231 - 26946092
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagttt 359  Q
    ||||||| ||||||||||||| | |||||||||||||||||  ||||||| |||||||||  ||||| ||||  |||||||||| | || ||||||||||    
T  26946231 agggcccatttggattgacttatttttgagcttatgcaaaacggcttatgtaaataaataagctttttatgtgttattcataagcttgttaaggtagttt 26946132  T
Q  360 atgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    ||||||||||| ||||||||||||||| |||| |||||||    
T  26946131 atgaaaaaacaacttatgaagatacaattttccttagtga 26946092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 260 - 401
Target Start/End: Original strand, 28689961 - 28690104
Alignment:
Q  260 tagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagac--ttttatgtactattcataagttggtcaaggtagt 357  Q
    |||||||| ||||||||| ||| | ||| || ||||||| ||  ||||||||||||||||| |   ||||||||| |||||||||||| |||||||||||    
T  28689961 tagggcccatttggattggcttattttttagtttatgcagaacagcttatgcaaataaatataaggttttatgtattattcataagtttgtcaaggtagt 28690060  T
Q  358 ttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||| ||||||||||||||||||||| |||  |||||||||    
T  28690061 ttatgaacaaacagcttatgaagatacaatttttattagtgaga 28690104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 401
Target Start/End: Complemental strand, 15515428 - 15515333
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||| ||||||||  |||||||||| |||||||||| | |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  15515428 ttatgctaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgaga 15515333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 258 - 401
Target Start/End: Complemental strand, 26435303 - 26435161
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 357  Q
    |||||||||||||| ||||||| | | ||||||||||| |||||  ||||||||||||||||| | ||||||||| ||||  |||||| ||||| |||||    
T  26435303 tttagggcccgttttgattgacatatttttgagcttatacaaaacagcttatgcaaataaata-agttttatgtattatttttaagtttgtcaaagtagt 26435205  T
Q  358 ttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||| | |||||||||||||  |||||||| |||||    
T  26435204 ttatgaaaaaactgtttatgaagatacatttttcgttactgaga 26435161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 270 - 401
Target Start/End: Original strand, 35590099 - 35590230
Alignment:
Q  270 ttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaac 369  Q
    |||||||||||| | ||| |||||||| ||||   ||||||||||||||||  ||||||||||   |||||||| | |||||||| ||||||||||||||    
T  35590099 ttggattgacttattttttagcttatgtaaaacaacttatgcaaataaataagcttttatgtatagttcataagcttgtcaaggttgtttatgaaaaaac 35590198  T
Q  370 agcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||| |||||| |||||||    
T  35590199 agcttatgaagatacaattttcgtcagtgaga 35590230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 6337839 - 6337742
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||| |||||||||  |||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  6337839 gcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagcgaga 6337742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 36423064 - 36422967
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||  ||||||| || |||||||||||| || ||||||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  36423064 gcttatgcaaataaataagcttttatttattattcataagtttgttaaggtagtttatgaataaacaacttatgaagataaaaatttcgttagtgaga 36422967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 37712035 - 37712163
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 367  Q
    ||||||||||| || | |||||||| ||| ||||  | |||||||||| ||||  |||||||||| |||||||||| | |||||||||||||||||||||    
T  37712035 gtttggattgatttatttttgagctaatgaaaaacagtttatgcaaatgaataagcttttatgta-tattcataagcttgtcaaggtagtttatgaaaaa 37712133  T
Q  368 acagcttatgaagatacaaatttcgttagt 397  Q
    ||| ||||||||||||||| ||||||||||    
T  37712134 acaacttatgaagatacaactttcgttagt 37712163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 306 - 401
Target Start/End: Complemental strand, 37329493 - 37329398
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||   |||||||||| |||||||||  | |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  37329493 ttatgcaaataaatgagcttttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgaga 37329398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 18327488 - 18327617
Alignment:
Q  265 cccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 364  Q
    ||||||||||||||||| | || ||  |||| |||||  |||||||||||||||||  |||||||||| || ||||||| | |||||| |||||||||||    
T  18327488 cccgtttggattgacttattttggaatttattcaaaacagcttatgcaaataaataagcttttatgtattactcataagcttgtcaagatagtttatgaa 18327587  T
Q  365 aaaacagcttatgaagatacaaatttcgtt 394  Q
    ||||||||||||||| | |||| |||||||    
T  18327588 aaaacagcttatgaacacacaattttcgtt 18327617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 48819302 - 48819399
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||   |||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  48819302 gcttatgcaaataaatgagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagtgaga 48819399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 310 - 401
Target Start/End: Complemental strand, 16889042 - 16888952
Alignment:
Q  310 gcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||  |||||||||| |||||||||| | || ||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  16889042 gcaaataaataagcttttatgtattattcataagcttgt-aaggtagtttatgaaaaaacagcttatgaagatacaattttcattagtgaga 16888952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 397
Target Start/End: Original strand, 26988158 - 26988244
Alignment:
Q  311 caaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||||||  |||||||||  |||||||||| | |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  26988158 caaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattgtcgttagt 26988244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 3069937 - 3069840
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||| ||||||| ||  |||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  3069937 gcttatacaaataagtaagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcactagtgaga 3069840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 324 - 401
Target Start/End: Complemental strand, 41196773 - 41196696
Alignment:
Q  324 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||| |||||||||| | ||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  41196773 ttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgaga 41196696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 288 - 401
Target Start/End: Original strand, 49971238 - 49971351
Alignment:
Q  288 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaa 387  Q
    ||||||||||||||   ||||||||||||||||  | ||||| || |||| ||||| | || || ||||||||||||||||||||||| ||||||||||     
T  49971238 gagcttatgcaaaacaacttatgcaaataaatattcctttatttattatttataagcttgttaatgtagtttatgaaaaaacagcttacgaagatacaat 49971337  T
Q  388 tttcgttagtgaga 401  Q
    ||||||||||||||    
T  49971338 tttcgttagtgaga 49971351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 286 - 401
Target Start/End: Original strand, 13038932 - 13039047
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 385  Q
    ||||| ||||||||||  ||| |||||||||||||  ||||||| || ||||||| || | || ||||||||||||||||||||| |||||||||||| |    
T  13038932 ttgaggttatgcaaaacggctgatgcaaataaataagcttttatatattattcatgagcttgttaaggtagtttatgaaaaaacaacttatgaagataaa 13039031  T
Q  386 aatttcgttagtgaga 401  Q
      ||||||||||||||    
T  13039032 gttttcgttagtgaga 13039047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 401
Target Start/End: Complemental strand, 32497399 - 32497258
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    |||| |||| ||||||||  ||| | || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||||||  | |||||||||    
T  32497399 ttagagcccatttggattagcttattttggagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtt 32497301  T
Q  359 tatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||| |||||| ||||||| ||||||||||||||    
T  32497300 tatgaaaaaacagtttatgaggatacaattttcgttagtgaga 32497258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 286 - 401
Target Start/End: Complemental strand, 9572886 - 9572770
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 384  Q
    ||||||||||||||||  |||| ||||||||||||  ||||| || || |||||||||||| || |||||||||||||||||||||  |||||||||||     
T  9572886 ttgagcttatgcaaaacagcttttgcaaataaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaagataa 9572787  T
Q  385 aaatttcgttagtgaga 401  Q
    |  ||| ||||||||||    
T  9572786 agtttttgttagtgaga 9572770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 401
Target Start/End: Original strand, 16225474 - 16225607
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    |||||||||||||||| | || ||||||||||||||  | ||||| |||||||||   ||||||||| || | ||||||| || |||||| |||| ||||    
T  16225474 ccgtttggattgacttattttagagcttatgcaaaacagtttatgtaaataaataagtttttatgtattaattataagtt-gttaaggtaatttaggaaa 16225572  T
Q  366 aaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||| ||||||||||||| | ||||||||||||||    
T  16225573 aaacaacttatgaagatac-agtttcgttagtgaga 16225607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 397
Target Start/End: Original strand, 17814148 - 17814286
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 357  Q
    |||||||| |||||||||  |||| | || ||||||||  ||||  ||||||||||||||||| | ||||||||| |||| |||||||  | ||||||||    
T  17814148 tttagggctcgtttggataaacttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataagtt-tttaaggtagt 17814246  T
Q  358 ttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||  | ||||||| |||||| ||||||||||    
T  17814247 ttatgaaaaaatgggttatgaaaatacaattttcgttagt 17814286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 51162256 - 51162363
Alignment:
Q  288 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaa 387  Q
    |||||||||||||   |||||||||||||||||  | || ||||| |||| | ||||| || ||||||||||||||||||||| |||||||| ||||||     
T  51162256 gagcttatgcaaagtagcttatgcaaataaataagcattaatgtattatttacaagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaat 51162355  T
Q  388 tttcgtta 395  Q
    ||||||||    
T  51162356 tttcgtta 51162363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 394
Target Start/End: Original strand, 1321510 - 1321635
Alignment:
Q  269 tttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcat-aagttggtcaaggtagtttatgaaaaa 367  Q
    ||||||||||||| | |||||||||| ||||||  ||||||||||||||||| |  || ||||| ||||||| ||||| ||||||||||| |||||||||    
T  1321510 tttggattgacttatttttgagcttacgcaaaatggcttatgcaaataaata-agcttgatgtattattcataaagtttgtcaaggtagtgtatgaaaaa 1321608  T
Q  368 acagcttatgaagatacaaatttcgtt 394  Q
     ||||||||  | |||||| |||||||    
T  1321609 gcagcttattgaaatacaactttcgtt 1321635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 401
Target Start/End: Original strand, 15791342 - 15791483
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    |||||||||||||||||| |||| | || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||||||  | |||||||||    
T  15791342 ttagggcccgtttggattaacttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataagtt-tttaaggtagtt 15791440  T
Q  359 tatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||  | | |||||||||||| |||||||| |||||    
T  15791441 tatgaaaaaatcgttaatgaagatacaattttcgttaatgaga 15791483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 45267468 - 45267562
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa-aacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||||  |||||  ||| |||| || || | |||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  45267468 gcttatgcaaataaataagctttttagtattatttattagcttgtcaaggtagtttatgaaaaaaacagcttatgaagatacaattttcgttagt 45267562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 1005343 - 1005440
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||  |||||| ||| |||||||||| | ||| |||||||| ||||||||||  ||||||||||||||| ||| | ||||||||    
T  1005343 gcttatgcaaataaataagcttttacgtattattcataagcttgtctaggtagttaatgaaaaaactacttatgaagatacaatttttgatagtgaga 1005440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 17628507 - 17628411
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||| ||||||||||   ||||||||| |||| |||||||  | |||||||||||||||||||| | |||||||||||||| ||||||||||||||    
T  17628507 gcttatacaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatgaagatacaattttcgttagtgaga 17628411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 399
Target Start/End: Original strand, 26542977 - 26543071
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    ||||||||||||||||  |||||||||| |||  ||||||| || || |||||||||||||||||| |||| |||  ||||| ||||||||||||    
T  26542977 cttatgcaaataaatatgcttttatgtattatatataagtttgttaatgtagtttatgaaaaaacaacttaagaaagtacaattttcgttagtga 26543071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 401
Target Start/End: Original strand, 15631891 - 15632004
Alignment:
Q  288 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaa 387  Q
    |||||||| |||||   ||||| ||||||||||   ||||||||| |||| ||||||| || || ||| ||||||||||||| | ||||||| ||||||     
T  15631891 gagcttatacaaaacaacttatacaaataaataagtttttatgtattatttataagtttgttaatgtattttatgaaaaaactgtttatgaaaatacaat 15631990  T
Q  388 tttcgttagtgaga 401  Q
    ||||||||||||||    
T  15631991 tttcgttagtgaga 15632004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 386
Target Start/End: Original strand, 20169248 - 20169349
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 384  Q
    |||||||||||| ||||  |||||||||||||||||  |||||||||| |||| |||||||  | ||  |||||||||||||||||| |||| || ||||    
T  20169248 tttgagcttatgaaaaacagcttatgcaaataaataagcttttatgtattatttataagtttttaaatatagtttatgaaaaaacagtttataaatatac 20169347  T
Q  385 aa 386  Q
    ||    
T  20169348 aa 20169349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 395
Target Start/End: Original strand, 50919493 - 50919581
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 395  Q
    |||||||||||||| || |||| | || |||| ||||||| ||||| ||||||||| ||||||||| |||||||||||||| ||||||||    
T  50919493 ttatgcaaataaat-gagttttttatattatttataagtttgtcaatgtagtttataaaaaaacaggttatgaagatacaattttcgtta 50919581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 13412534 - 13412439
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||| ||| | ||||||||| |||| |||||||  | ||||||||||||||||||||   | |||||||||||||||| ||||||||||    
T  13412534 cttatgcaaatacataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccattcatgaagatacaaattttgttagtgaga 13412439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 23544819 - 23544875
Alignment:
Q  329 tgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 385  Q
    |||| |||||||||| | ||||||||||||||||||||||||||||||||| |||||    
T  23544819 tgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaaaataca 23544875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 395
Target Start/End: Complemental strand, 5243486 - 5243396
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 395  Q
    |||||||||||||||||   |||| |||| |||| |||||||  | ||||||||||||||||||| || |||||||||||||| ||||||||    
T  5243486 gcttatgcaaataaataagtttttgtgtattatttataagttttt-aaggtagtttatgaaaaaatagtttatgaagatacaattttcgtta 5243396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 395
Target Start/End: Original strand, 5347114 - 5347248
Alignment:
Q  260 tagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 359  Q
    |||||| ||||||||||  ||| | || ||||||||  ||||   |||||||||||||||| | ||||||||| |||| |||||||  | ||||||||||    
T  5347114 tagggctcgtttggattagcttattttagagcttatataaaataacttatgcaaataaatacatttttatgtattatttataagttttt-aaggtagttt 5347212  T
Q  360 atgaaaaaacagcttatgaagatacaaatttcgtta 395  Q
    |||||||||  | ||||||| |||||| ||||||||    
T  5347213 atgaaaaaatgggttatgaaaatacaattttcgtta 5347248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 368
Target Start/End: Complemental strand, 10850173 - 10850090
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 368  Q
    |||||||||||||||||  | || ||||||||||||  |||||||||| |||||||||| | ||||| |||||||||| |||||    
T  10850173 tttgagcttatgcaaaatagtttttgcaaataaataagcttttatgtattattcataaggttgtcaacgtagtttatggaaaaa 10850090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 401
Target Start/End: Complemental strand, 46689651 - 46689536
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 385  Q
    ||||||||||||||||  | ||||||||||||| |  ||||||| || ||||||| || | || |||||| ||||| | |||||| |||||||| ||| |    
T  46689651 ttgagcttatgcaaaacagtttatgcaaataaaaaagcttttatttattattcatgagcttgttaaggtattttataataaaacaacttatgaaaataaa 46689552  T
Q  386 aatttcgttagtgaga 401  Q
    | ||||||||||||||    
T  46689551 attttcgttagtgaga 46689536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 28690187 - 28690117
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    |||| |||||||||||||||| | |||||||||||| ||||  |||||||||||||||||  |||||||||    
T  28690187 aggggccgtttggattgacttgtttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgt 28690117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 383
Target Start/End: Original strand, 46473078 - 46473176
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 383  Q
    |||||||||||||||||  |||| || |||||||||  ||||||| || ||||||| || |  | |||||||| |||||||||||| ||||||||||||    
T  46473078 tttgagcttatgcaaaacagcttgtgtaaataaataagcttttatttattattcatgaggtttttaaggtagtatatgaaaaaacaacttatgaagata 46473176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 365
Target Start/End: Complemental strand, 1265812 - 1265715
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    ||||| |||||||| | |||||||||||||||||   ||||| |||| | |||   ||||||||| ||||||||| || |||||||||||||||||||    
T  1265812 gtttgaattgacttatttttgagcttatgcaaaacaacttatacaaacagataagattttatgtattattcataattttgtcaaggtagtttatgaaa 1265715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 3116144 - 3116052
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||||||||||||| | ||||||||  | || |||||||  | ||||||||||||||||||||   |||||||||||||| ||||||||||    
T  3116144 gcttatgcaaataaataaatttttatgttttgtttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacaattttcgttagt 3116052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 305 - 385
Target Start/End: Original strand, 10082254 - 10082335
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatgaagataca 385  Q
    ||||||||||||||||   ||||||||  |||| ||||||| |||||||||||||||| |||||||| |||||||| |||||    
T  10082254 cttatgcaaataaataagtttttatgtgttattgataagtttgtcaaggtagtttatgaaaaaaacaacttatgaaaataca 10082335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 22593490 - 22593393
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||| | ||||||||| |||||||||| | || || | |||||| |||||| ||  |||| ||||||||| ||| ||||||||||    
T  22593490 gcttatgcaaataaataaatttttatgtattattcataagcttgtaaatgcagtttacgaaaaatcactttataaagatacaatttttgttagtgaga 22593393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 31378834 - 31378741
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||||  ||||||| || |||| | ||| | ||||||||||||||||||||||  | |||| ||||||||| ||| ||||||    
T  31378834 gcttatgcaaataaataagcttttatatattattaacaagcttgtcaaggtagtttatgaaaaaaacgtttataaagatacaatttttgttagt 31378741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 357
Target Start/End: Original strand, 391129 - 391225
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaat-agacttttatgtactattcataagttggtcaaggtagt 357  Q
    |||||||||||||||| ||| | |||||| ||||||||||  |||||||||||||||| ||  |||||| || |||||||||| | ||||| |||||    
T  391129 gggcccgtttggattggcttatttttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaatgtagt 391225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 37712248 - 37712180
Alignment:
Q  263 ggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    |||| |||||||||||||| | |||||||||| | ||||  ||||||||||||||||| ||||||||||    
T  37712248 ggcctgtttggattgacttatttttgagcttacgaaaaatagcttatgcaaataaataaacttttatgt 37712180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 401
Target Start/End: Original strand, 41003376 - 41003487
Alignment:
Q  290 gcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtc-aaggtagtttatgaaaaaacagcttatgaagatacaaat 388  Q
    |||| ||||||||  ||||||||||||||||   ||||||||| |||| ||||||| ||| ||||||||||||| ||||||||||||  |||||| || |    
T  41003376 gcttgtgcaaaaaaacttatgcaaataaataagtttttatgtattatttataagtttgtcaaaggtagtttatg-aaaaacagcttactaagatataatt 41003474  T
Q  389 ttcgttagtgaga 401  Q
    ||  |||||||||    
T  41003475 tttattagtgaga 41003487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 400
Target Start/End: Complemental strand, 1565504 - 1565368
Alignment:
Q  263 ggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg 362  Q
    ||||| |||||||||||||   | |||||||||| || |  ||||||| ||||||| |  |||||||| | ||||| |||| | ||||||||||||||||    
T  1565504 ggcccatttggattgacttacttctgagcttatgaaaca--gcttatgtaaataaacaagcttttatgcattattcgtaagcttgtcaaggtagtttatg 1565407  T
Q  363 aa-aaaacagcttatgaagatacaaatttcgttagtgag 400  Q
    || |||| | | ||||||||||||| ||||| |||||||    
T  1565406 aaaaaaataacatatgaagatacaattttcgctagtgag 1565368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 397
Target Start/End: Original strand, 10365176 - 10365266
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||| |||| ||||||||||| |||| ||||| | ||||| |||||||||| ||||||| |  ||||| |||||| ||||||||||    
T  10365176 ttatgcaaatgaataaacttttatgtattattaataagcttgtcaaagtagtttatg-aaaaacaaccgatgaatatacaattttcgttagt 10365266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 401
Target Start/End: Original strand, 18317034 - 18317101
Alignment:
Q  334 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||| | |||||||||| ||||||||||||| | |||||||||||||  ||||||| |||||    
T  18317034 tattcataagattgtcaaggtaggttatgaaaaaacatcctatgaagatacaatattcgttaatgaga 18317101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 368
Target Start/End: Complemental strand, 37148211 - 37148112
Alignment:
Q  269 tttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 368  Q
    ||||||||||||| | ||  ||||||||||||   |||||||||||||||||  | || ||||| |||| ||||||  || |||||||||||||||||||    
T  37148211 tttggattgacttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaaa 37148112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 368
Target Start/End: Complemental strand, 37157036 - 37156937
Alignment:
Q  269 tttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 368  Q
    ||||||||||||| | ||  ||||||||||||   |||||||||||||||||  | || ||||| |||| ||||||  || |||||||||||||||||||    
T  37157036 tttggattgacttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaaa 37156937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 393
Target Start/End: Complemental strand, 39658376 - 39658317
Alignment:
Q  334 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgt 393  Q
    |||||||||| | | ||||||| |||||||||||||||||||||||| ||||| ||||||    
T  39658376 tattcataagcttgccaaggtaatttatgaaaaaacagcttatgaaggtacaattttcgt 39658317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 39941516 - 39941587
Alignment:
Q  307 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatga 378  Q
    |||||||||||||  | ||||||||| |||||||||| | ||||| |||||| ||||||||||| |||||||    
T  39941516 tatgcaaataaatgaatttttatgtattattcataagcttgtcaaagtagttaatgaaaaaacaacttatga 39941587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 383
Target Start/End: Complemental strand, 35282722 - 35282598
Alignment:
Q  258 tttagggcccgtttggattga-cttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtag 356  Q
    |||||||||||||||||| || ||| | ||||| ||| |||||||  |||||||||||||||||  | ||||| || |||| ||||    || |||||||    
T  35282722 tttagggcccgtttggatggagcttat-tttgaactt-tgcaaaacagcttatgcaaataaataagcgtttatttattatttataaacatgttaaggtag 35282625  T
Q  357 tttatgaaaaaacagcttatgaagata 383  Q
    |||||||||||||| ||||||||||||    
T  35282624 tttatgaaaaaacaacttatgaagata 35282598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 37329315 - 37329385
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    ||||||||||||||| ||||| | |||||||||||| ||||   ||||||||||||||||  |||||||||    
T  37329315 agggcccgtttggatcgacttatttttgagcttatgaaaaataacttatgcaaataaataagcttttatgt 37329385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 369
Target Start/End: Original strand, 39941447 - 39941509
Alignment:
Q  307 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaac 369  Q
    |||||||||||||  ||||||||||| |||||||||| | |||||  ||||||||||||||||    
T  39941447 tatgcaaataaatgaacttttatgtattattcataagcttgtcaaaatagtttatgaaaaaac 39941509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 399
Target Start/End: Original strand, 42591370 - 42591480
Alignment:
Q  289 agcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaat 388  Q
    ||||||| |||||  |||| | ||| ||||||  ||||||  || |||| ||||||| || |||||| |||||||||||| || |||||||||||||  |    
T  42591370 agcttatacaaaacagcttgtacaagtaaataagcttttacatattatttataagtttgttaaggtattttatgaaaaaatagtttatgaagatacactt 42591469  T
Q  389 ttcgttagtga 399  Q
    |||||||||||    
T  42591470 ttcgttagtga 42591480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 22103114 - 22103205
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  || ||||||| |||||| ||||||||||    
T  22103114 gcttatgtaaataaatacatttttatgtattatttataagttttt-aaggtagtttatgaaaaatgag-ttatgaaaatacaattttcgttagt 22103205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 399
Target Start/End: Original strand, 25485733 - 25485846
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 385  Q
    |||| ||||| |||||  ||||||||||||||||| | |||||| |  ||||||| |  |  | |||||||||||||||||||||  ||||||||||| |    
T  25485733 ttgaacttatacaaaagagcttatgcaaataaataaatttttatttgttattcatgaccttattaaggtagtttatgaaaaaacaatttatgaagataaa 25485832  T
Q  386 aatttcgttagtga 399  Q
    | ||||| ||||||    
T  25485833 attttcgctagtga 25485846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 28122619 - 28122712
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||||||||||||   ||||||| || ||||||| || |  | ||||||||||||||||||| | ||||| |||||| || ||||||||||    
T  28122619 gcttatgcaaataaattagcttttatttattattcatgagcttcttaaggtagtttatgaaaaaataacttataaagataaaattttcgttagt 28122712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 331
Target Start/End: Original strand, 35897527 - 35897592
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    |||||||||||||||| | ||||| |||||| ||||  ||||||| ||||||||| ||||||||||    
T  35897527 ccgtttggattgacttatttttgaacttatgaaaaatagcttatgtaaataaataaacttttatgt 35897592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 306 - 395
Target Start/End: Complemental strand, 36259372 - 36259283
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 395  Q
    ||||| ||||||||| | ||||||||| ||||| ||| || || |  ||||||||||||||||||| |||| || |||||| ||||||||    
T  36259372 ttatgtaaataaataaatttttatgtattattcttaactttgtaagtgtagtttatgaaaaaacagtttataaacatacaattttcgtta 36259283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 6900693 - 6900625
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatg 330  Q
    ||||| ||||||||||||||   |||||| ||||||||||   |||||||||||||||| |||||||||    
T  6900693 gggcctgtttggattgacttacttttgagattatgcaaaacgacttatgcaaataaatacacttttatg 6900625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 14461075 - 14461027
Alignment:
Q  353 gtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||||| |||| ||||||||| |||| |||||||||    
T  14461075 gtagtttatgaaaaaacagtttataaagatacaattttcattagtgaga 14461027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 399
Target Start/End: Original strand, 19284853 - 19284996
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 357  Q
    |||| |||||||||| ||| ||||   || ||||||||  ||||  ||||||  |||||||||  || ||||||| |||| ||||||| || ||| || |    
T  19284853 tttatggcccgtttgaattaacttactttagagcttatataaaacagcttatataaataaataagctattatgtattatttataagtttgttaagatatt 19284952  T
Q  358 ttatgaaaaaa--cagcttatgaagatacaaatttcgttagtga 399  Q
    |||| ||||||  ||| |||||||||||||| ||||||||||||    
T  19284953 ttataaaaaaaaacagtttatgaagatacaattttcgttagtga 19284996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 396
Target Start/End: Complemental strand, 1683947 - 1683892
Alignment:
Q  341 aagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttag 396  Q
    ||||| ||||||||||||||||||||||||| |||| ||  ||||| |||||||||    
T  1683947 aagtttgtcaaggtagtttatgaaaaaacagtttataaaactacaattttcgttag 1683892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 395
Target Start/End: Original strand, 34265596 - 34265663
Alignment:
Q  328 atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 395  Q
    ||||| |||| |||| || || ||||||||||||||||||||| |||||||| | |||||||| ||||    
T  34265596 atgtattatttataaatttgttaaggtagtttatgaaaaaacaacttatgaatagacaaattttgtta 34265663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 41196613 - 41196672
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    ||||||| ||||||||| ||| | |||||||||||| ||||  |||||||||||||||||    
T  41196613 agggcccatttggattggcttatttttgagcttatgtaaaatagcttatgcaaataaata 41196672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 331
Target Start/End: Complemental strand, 47413548 - 47413485
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    |||||||||| ||| | |||||||||||| ||||  |||||||||||||||||  |||||||||    
T  47413548 gtttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgt 47413485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 397
Target Start/End: Original strand, 16708765 - 16708895
Alignment:
Q  267 cgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 366  Q
    |||||||||||||||   || ||||||||  |||   ||||||||||||||| | |  || |||||||||| |||| |  || ||||| |||||||||||    
T  16708765 cgtttggattgacttaatttagagcttatataaaccggcttatgcaaataaagaaatattaatgtactatttataaatctgttaaggttgtttatgaaaa 16708864  T
Q  367 aacagcttatgaagatacaaatttcgttagt 397  Q
    ||||  ||||||| |||||| |||| |||||    
T  16708865 aacaatttatgaatatacaattttcattagt 16708895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 331
Target Start/End: Original strand, 26435086 - 26435148
Alignment:
Q  269 tttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    ||||||||||||| | ||| |||||||| ||||  | |||||||||||||||||||| |||||    
T  26435086 tttggattgacttatttttaagcttatgaaaaatagtttatgcaaataaatagacttatatgt 26435148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 394
Target Start/End: Original strand, 29333444 - 29333510
Alignment:
Q  328 atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtt 394  Q
    ||||| |||| ||||||| || ||| ||| ||||||||||||| |||||||| |||||| |||||||    
T  29333444 atgtattatttataagtttgttaagatagcttatgaaaaaacaacttatgaatatacaattttcgtt 29333510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 398
Target Start/End: Original strand, 41130017 - 41130091
Alignment:
Q  324 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtg 398  Q
    ||||||||| |||||||||| |  || |||| |||||||  |||||| ||||||||||||||| |||| ||||||    
T  41130017 ttttatgtattattcataagcttctctaggtggtttatgtcaaaacaacttatgaagatacaattttcattagtg 41130091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 399
Target Start/End: Complemental strand, 46501082 - 46500988
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaattt-cgttagtga 399  Q
    ||||| ||||||||   ||||| |||| |||| ||||| | ||||  |||||||||||||||| || |||||||||||||| ||| |||||||||    
T  46501082 ttatgtaaataaatgagcttttttgtattatttataagcttgtcattgtagtttatgaaaaaataggttatgaagatacaattttccgttagtga 46500988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 23369332 - 23369392
Alignment:
Q  339 ataagttggtcaaggtagtttatgaaaaaa--cagcttatgaagatacaaatttcgttagt 397  Q
    ||||||| ||||| ||||||||||||||||  ||| ||||||||||| || ||||||||||    
T  23369332 ataagtttgtcaaagtagtttatgaaaaaaaacagtttatgaagatataactttcgttagt 23369392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 364
Target Start/End: Complemental strand, 35897743 - 35897646
Alignment:
Q  267 cgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 364  Q
    |||||||||||| || | ||| || ||||||||||   ||||||||||||||||   |||||| || |||||||||| |  |||| ||||||||||||    
T  35897743 cgtttggattgatttatttttaaggttatgcaaaacaacttatgcaaataaataagtttttatttattattcataagcttttcaaagtagtttatgaa 35897646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 48819481 - 48819412
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    ||||| |||||||||| ||| | ||| |||||||| ||||  |||||||||||||||||  |||||||||    
T  48819481 gggccggtttggattggcttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgt 48819412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 4068298 - 4068230
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 329  Q
    ||||||||||||||||| ||| | ||| || ||||| |||   ||||||||||||||||| ||||||||    
T  4068298 agggcccgtttggattggcttattttttagtttatgaaaagtagcttatgcaaataaataaacttttat 4068230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 401
Target Start/End: Original strand, 38781130 - 38781178
Alignment:
Q  353 gtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||| ||||||||||||  |||| ||| ||||||||||    
T  38781130 gtagtttatgaaaaatcagcttatgaagccacaattttggttagtgaga 38781178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 51409790 - 51409730
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 364  Q
    |||||||||||||||||   || |||||| |||||||||||| || || ||||||||||||    
T  51409790 gcttatgcaaataaataagtttgtatgtattattcataagtttgtaaatgtagtttatgaa 51409730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 260 - 401
Target Start/End: Original strand, 32131399 - 32131540
Alignment:
Q  260 tagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 359  Q
    |||| ||| ||||||||||||| | |||||||||||||||||  |||||||||||||||||  |||||||| | ||||| |||||| |||||||||||||    
T  32131399 taggacccatttggattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagttt 32131498  T
Q  360 atgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||| ||||| | ||||||||||||| ||||  ||||||||    
T  32131499 atgaataaacaacctatgaagatacaattttcaatagtgaga 32131540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 306 - 401
Target Start/End: Complemental strand, 10299007 - 10298912
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||  |||||| ||||  ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||| |||| |||||    
T  10299007 ttatgcaaataaattaacttttttgtatcattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttaatgaga 10298912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 399
Target Start/End: Complemental strand, 16972435 - 16972344
Alignment:
Q  309 tgcaaataaatagacttttatgtactattcataagttggtc-aaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    ||||||||||||  ||| |||||| |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  16972435 tgcaaataaataagcttgtatgtattattcataagtttgtctaaggtagttcatgaaaaaacagcttatgaagatacaattttcgttagtga 16972344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 35453413 - 35453488
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaa 379  Q
    |||||||||||||||||  |||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||    
T  35453413 gcttatgcaaataaataagcttttatgtattattcataagtttatcaaggtagtttatgaaaaaacagcttatgaa 35453488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 401
Target Start/End: Original strand, 42102065 - 42102206
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    |||||||||||||||||| |||| | || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||||||  | |||||||||    
T  42102065 ttagggcccgtttggattaacttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagtt-tttaaggtagtt 42102163  T
Q  359 tatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||| | | |||||||||||| |||||||| |||||    
T  42102164 tatgaaaaaaccgttaatgaagatacaattttcgttaatgaga 42102206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 32975690 - 32975787
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||  ||||||| || |||||||||| | |||||||||||||||||||| ||| ||||||||||||||| ||| ||| ||||||    
T  32975690 gcttatgcaaataaataagcttttatatattattcataagcttgtcaaggtagtttatgaaaacacaacttatgaagatacaatttttgtttgtgaga 32975787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 34286646 - 34286550
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||| |||||||||  |||||||||| |||||||||| | ||||||||||||| || ||||||||||||||||||||||| ||||||||| ||||    
T  34286646 gcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttgtg-aaaaacagcttatgaagatacaattttcgttagggaga 34286550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 401
Target Start/End: Original strand, 19327855 - 19327966
Alignment:
Q  289 agcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaat 388  Q
    |||||||||||||   |||||||||||||||| ||||||||||| |||||||||||| || || |||||||||| |||||||| |||| ||||||||| |    
T  19327855 agcttatgcaaaacaacttatgcaaataaataaacttttatgtattattcataagtttgt-aatgtagtttatggaaaaacagtttataaagatacaatt 19327953  T
Q  389 ttcgttagtgaga 401  Q
    || |||| |||||    
T  19327954 tttgttaatgaga 19327966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 382
Target Start/End: Original strand, 28879061 - 28879139
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagat 382  Q
    |||||||||||||||||  |||||||||| |||||||||| | ||||||||||||||||||| |||| |||||||||||    
T  28879061 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaataacaacttatgaagat 28879139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 323 - 393
Target Start/End: Complemental strand, 35168505 - 35168435
Alignment:
Q  323 cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgt 393  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||| |||||||||||||| ||||||    
T  35168505 cttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattttcgt 35168435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 290 - 401
Target Start/End: Original strand, 19925546 - 19925657
Alignment:
Q  290 gcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatt 389  Q
    |||||| |||||  |||||||||||||||||  ||||||  || |||| ||||||| || |||||| |||| |||||||||  |||||||||||||| ||    
T  19925546 gcttatacaaaacagcttatgcaaataaataagcttttaattattatttataagtttgttaaggtattttacgaaaaaacaatttatgaagatacaattt 19925645  T
Q  390 tcgttagtgaga 401  Q
    ||||||||||||    
T  19925646 tcgttagtgaga 19925657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 401
Target Start/End: Complemental strand, 42363437 - 42363303
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    |||||||||||  ||| | || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||||||  | ||||||||||||||||    
T  42363437 ccgtttggattagcttattttagagcttatataaaatagcttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaa 42363339  T
Q  366 aaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||| | |||||||||||||| ||| ||||||||||    
T  42363338 aaaccgtttatgaagatacaatttttgttagtgaga 42363303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 16706202 - 16706096
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 384  Q
    |||||||||||||||||  |||||||||||||||||   ||||||||| |||||||||||| |  || |||||||||||||||||| | || ||| ||||    
T  16706202 tttgagcttatgcaaaacggcttatgcaaataaatatgtttttatgtattattcataagtttgaaaatgtagtttatgaaaaaacaacatacgaatatac 16706103  T
Q  385 aaatttc 391  Q
    || ||||    
T  16706102 aactttc 16706096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 260 - 401
Target Start/End: Original strand, 12607039 - 12607179
Alignment:
Q  260 tagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 359  Q
    ||||||||||||| |||  ||| | || ||||||||  ||||  || ||||||||||||||   ||||||||| |||| |||||||  | ||||||||||    
T  12607039 tagggcccgtttgaattagcttattttagagcttatataaaacagcatatgcaaataaataagtttttatgtattatttataagttttt-aaggtagttt 12607137  T
Q  360 atgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||| | |||||||||||||| || |||||||||||    
T  12607138 atgaaaaaacggtttatgaagatacaatttccgttagtgaga 12607179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 266 - 401
Target Start/End: Original strand, 13131395 - 13131539
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtca---------aggtag 356  Q
    |||||||||||  ||| | ||| |||||||||||||    |||||||||||||||  |||||||||| |||||||||||| ||||         ||||||    
T  13131395 ccgtttggatttgcttattttttagcttatgcaaaacaaattatgcaaataaataagcttttatgtattattcataagtttgtcatgtcaaggtaggtag 13131494  T
Q  357 tttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||||||||| |||||| ||| ||| ||||||    
T  13131495 tttatgaaaaaacagcttatgaaaatacaatttttgtttgtgaga 13131539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 401
Target Start/End: Original strand, 11988202 - 11988296
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||   ||||||||| |||| |||||||  | ||||||||| |||||||||| | |||||||||||||| ||||||||||||||    
T  11988202 ttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagttcatgaaaaaaccgtttatgaagatacaattttcgttagtgaga 11988296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 397
Target Start/End: Complemental strand, 24350600 - 24350509
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||| ||  ||||||| || |||||||||| | ||||| ||| |||||||||||| |||||||||||||| || ||||||||||    
T  24350600 ttatgcaaataattaagcttttatatattattcataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataattttcgttagt 24350509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 399
Target Start/End: Original strand, 38895662 - 38895757
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    ||||||||||| ||||| |||||||| || |||||||||| | || ||||||||||||||||||| |  ||||||||||||||  || ||||||||    
T  38895662 gcttatgcaaaaaaataaacttttatttattattcataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaatatttgttagtga 38895757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 266 - 408
Target Start/End: Complemental strand, 19925509 - 19925368
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    |||||||||||||||| | || ||||||||||| ||  | |||||||||||||||  | || ||||| |||| ||||  | || ||||||| ||||||||    
T  19925509 ccgtttggattgacttattttagagcttatgcataacagtttatgcaaataaataagcattaatgtattatttataaacttgttaaggtag-ttatgaaa 19925411  T
Q  366 aaacagcttatgaagatacaaatttcgttagtgagacattatg 408  Q
     |||| |||||||| |||||| |||||||||| ||| ||||||    
T  19925410 taacaacttatgaatatacaattttcgttagtaagatattatg 19925368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 386
Target Start/End: Original strand, 35285931 - 35286013
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 386  Q
    |||||||||||||||||  ||||| |||  |||||||||| | ||||| ||||||||||||||||  ||||||||||||||||    
T  35285931 gcttatgcaaataaataagcttttgtgtgttattcataagctcgtcaaagtagtttatgaaaaaaatgcttatgaagatacaa 35286013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 385
Target Start/End: Original strand, 2669651 - 2669732
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 385  Q
    |||||||||||||||||  || | ||||| |||| ||||||| || ||||||||||||||||||||| |||||||| |||||    
T  2669651 gcttatgcaaataaataagctctaatgtattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatataca 2669732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 9131211 - 9131118
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||||||||| |||  |||||||||| |||| ||||| | ||| |  |||||| |||| ||||||||||||||||||||| ||||||||||    
T  9131211 gcttatgcaaatatataagcttttatgtattatttataagcttgtcgatttagtttctgaagaaacagcttatgaagatacaattttcgttagt 9131118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 399
Target Start/End: Complemental strand, 14709617 - 14709525
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    |||||||| ||||||  |||||| |||| ||||||||| | |||||| |||||||||||||||||||| ||||| |||||| ||| ||||||||    
T  14709617 ttatgcaactaaataagcttttaagtacaattcataagcttgtcaagctagtttatgaaaaaacagctcatgaa-atacaattttagttagtga 14709525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 8217005 - 8216893
Alignment:
Q  287 tgagcttatgcaaaaatgcttatgcaaataaatagactttt-atgtactattcataagttggtc-aaggtagtttatgaaaaaacagcttatgaagatac 384  Q
    ||||||| |||||||  |||||||||||| ||||  ||||| ||||| |||||||||  | ||| ||||||||||||||||||  || ||||||||||||    
T  8217005 tgagcttgtgcaaaatagcttatgcaaattaataagctttttatgtattattcataatcttgtctaaggtagtttatgaaaaagtaggttatgaagatac 8216906  T
Q  385 aaatttcgttagt 397  Q
    || ||||||||||    
T  8216905 aattttcgttagt 8216893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 401
Target Start/End: Complemental strand, 38338976 - 38338837
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    ||||||||||||||||  ||| | || ||||||||  ||||  |||||||||||||||||   |||||  || |||| |||||||  | |||||||||||    
T  38338976 agggcccgtttggattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttaaatattatttataagttttt-aaggtagttta 38338878  T
Q  361 tgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||| || |||||||||||  | ||||||||||||||    
T  38338877 tgaaaaaatagtttatgaagatatgattttcgttagtgaga 38338837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 401
Target Start/End: Original strand, 8752811 - 8752906
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||| |||||  ||||| |||| ||||| || ||  ||||| ||| ||||||||||||||||||| |||||||||||||| ||| ||||||    
T  8752811 ttatgcaaagaaataagcttttgtgtattattcgtaggtgtgtcaaagtaatttatgaaaaaacagcttaagaagatacaaattttgtttgtgaga 8752906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 397
Target Start/End: Original strand, 30973954 - 30974085
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    |||||||||||| ||| | || |||||||||||||   ||||||| ||||||| |  | || ||||| |||| |||| || || |||| |||||||||||    
T  30973954 ccgtttggattggcttattttagagcttatgcaaagcagcttatgtaaataaagaagcattaatgtattatttataaatttgttaaggcagtttatgaaa 30974053  T
Q  366 aaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||| ||||||||  ||||| ||||||||||    
T  30974054 aaacaacttatgaatttacaattttcgttagt 30974085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 383
Target Start/End: Complemental strand, 32924314 - 32924216
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 383  Q
    |||||||||||||||||  |||||||| ||||||||  ||||||| |  |||| ||||| | ||  | |||||||||||||||||| ||||||||||||    
T  32924314 tttgagcttatgcaaaacagcttatgcgaataaatatgcttttatttgttatttataagcttgtttatgtagtttatgaaaaaacaacttatgaagata 32924216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 28280712 - 28280809
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||  | |||||||| |||| ||||||| || || ||||||||||||||||| | |||||||| || |  ||| ||||||||||    
T  28280712 gcttatgcaaataaatatgcatttatgtattatttataagtttgttaatgtagtttatgaaaaaactgtttatgaaggtataccttttgttagtgaga 28280809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 397
Target Start/End: Original strand, 43577208 - 43577317
Alignment:
Q  288 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaa 387  Q
    ||||||||||||||  | ||||||||||||||| |  || ||||| |||| |||| || || |||||||||||| |||||||| ||||| || ||| ||     
T  43577208 gagcttatgcaaaatagtttatgcaaataaataaatattaatgtattatttataaatttgttaaggtagtttataaaaaaacaacttataaatataaaat 43577307  T
Q  388 tttcgttagt 397  Q
    ||||||||||    
T  43577308 tttcgttagt 43577317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 395
Target Start/End: Complemental strand, 24867011 - 24866943
Alignment:
Q  327 tatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 395  Q
    |||||| |||| ||||| | || || |||||||||||||||||||||||||||| ||||| ||||||||    
T  24867011 tatgtattatttataagattgttaatgtagtttatgaaaaaacagcttatgaaggtacaattttcgtta 24866943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 399
Target Start/End: Complemental strand, 25333771 - 25333720
Alignment:
Q  347 gtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  25333771 gtcaaggtagtttatgaaaaa-caacttatgaagatacaattttcgttagtga 25333720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 28879236 - 28879168
Alignment:
Q  263 ggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    ||||||||||||||||||| | ||| |||||||| ||||  |||||||||||||||||  |||||||||    
T  28879236 ggcccgtttggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgt 28879168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 397
Target Start/End: Complemental strand, 37410950 - 37410903
Alignment:
Q  350 aaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||    
T  37410950 aaggtagtttatgaaaaaacagttcatgaagatacaattttcgttagt 37410903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 13131626 - 13131556
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    ||||||||||||||||||||| | ||| |||||||| ||||  || ||||||||||||||  |||||||||    
T  13131626 agggcccgtttggattgacttatttttaagcttatgaaaaatagcatatgcaaataaataagcttttatgt 13131556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 32213105 - 32213043
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 366  Q
    |||||||||||||||||  |||||||||| |||||||||| | |||| | |||||||||||||    
T  32213105 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaggttagtttatgaaaa 32213043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 32975872 - 32975802
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 329  Q
    ||||||||||||| ||||| ||| | |||||||||||| ||||  |||||||||||||||||  |||||||    
T  32975872 ttagggcccgtttagattgtcttgtttttgagcttatgaaaaatagcttatgcaaataaataagcttttat 32975802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 41145481 - 41145382
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactatt---cataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgag 400  Q
    |||||||||||||||||  ||||||| || ||||   |||||||| || ||||||||||||||||||||| ||| | ||||||| | |||| ||||||||    
T  41145481 gcttatgcaaataaataagcttttatttattattattcataagtttgttaaggtagtttatgaaaaaacaactt-taaagatacgattttcattagtgag 41145383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 16706001 - 16706073
Alignment:
Q  259 ttagggcccgtttggatt-gacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    |||||||||||||||||| | ||| | |||||||||||||||||  |||||||||||||||||  |||||||||    
T  16706001 ttagggcccgtttggattaggcttat-tttgagcttatgcaaaacagcttatgcaaataaatacgcttttatgt 16706073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 16972266 - 16972327
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 329  Q
    ||||||||||||||   ||||||||||| |||||  ||||||||||||||||| ||||||||    
T  16972266 gtttggattgacttaattttgagcttattcaaaatagcttatgcaaataaataaacttttat 16972327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 386
Target Start/End: Original strand, 2563363 - 2563443
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 386  Q
    ||||||||||||||| |  || ||||| |||| ||||||| || || |||||||||||||||||| ||| |||| ||||||    
T  2563363 ttatgcaaataaataaatattaatgtattatttataagtttgttaaagtagtttatgaaaaaacaacttttgaatatacaa 2563443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 395
Target Start/End: Original strand, 3664094 - 3664229
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    ||||||||||||||||||  ||| | || ||||||||  ||||  | ||||||||||||||| | ||||||||| |||| |||||||  ||||  || ||    
T  3664094 ttagggcccgtttggattagcttattttagagcttatataaaatagtttatgcaaataaataaatttttatgtattatttataagtt-ttcaaactattt 3664192  T
Q  359 tatgaaaaaacagcttatgaagatacaaatttcgtta 395  Q
    |||| |||||||  |||||||||| | | ||||||||    
T  3664193 tatggaaaaacaagttatgaagatgcgattttcgtta 3664229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 14262330 - 14262422
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||| |  | || ||||  |||| |||| || || ||||||||||||||||||||| |||||||| |||||| ||| ||||||    
T  14262330 cttatgcaaataaagaagcattaatgtgttatttataaatttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgttagt 14262422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 14942391 - 14942519
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 367  Q
    |||||||||| ||| | || ||||||||| ||||   |||||| | |||||||  ||||| |||| |||| ||||| | || ||| ||||||||||||||    
T  14942391 gtttggattggcttattttagagcttatgtaaaacaacttatgtatataaataagcttttgtgtattatttataagcttgttaagttagtttatgaaaaa 14942490  T
Q  368 acagcttatgaagatacaaatttcgttag 396  Q
    ||  ||||||||||| ||| ||| |||||    
T  14942491 acgacttatgaagatgcaatttttgttag 14942519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 397
Target Start/End: Original strand, 32751143 - 32751234
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||||||||||| | |||||||||||||| |||||||  | || |||||||||| ||||||||  |||| || |||||| ||||||||||    
T  32751143 ttatgcaaataaataaatttttatgtactattaataagtt-tttaaagtagtttatgaaaaaaacattttataaaaatacaattttcgttagt 32751234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 397
Target Start/End: Complemental strand, 218333 - 218244
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  |  |||||||||||||| ||||||||||    
T  218333 ttatgtaaataaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaactat-ttatgaagatacaattttcgttagt 218244  T

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Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 397
Target Start/End: Complemental strand, 694893 - 694804
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  |  |||||||||||||| ||||||||||    
T  694893 ttatgtaaataaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaactat-ttatgaagatacaattttcgttagt 694804  T

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Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 397
Target Start/End: Complemental strand, 699102 - 699013
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  |  |||||||||||||| ||||||||||    
T  699102 ttatgtaaataaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaactat-ttatgaagatacaattttcgttagt 699013  T

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Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 397
Target Start/End: Complemental strand, 731956 - 731867
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  |  |||||||||||||| ||||||||||    
T  731956 ttatgtaaataaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaactat-ttatgaagatacaattttcgttagt 731867  T

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Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 397
Target Start/End: Complemental strand, 855852 - 855763
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||| ||||||||| | ||||||||| |||| |||||||  | ||||||||||||||||||  |  |||||||||||||| ||||||||||    
T  855852 ttatgtaaataaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaactat-ttatgaagatacaattttcgttagt 855763  T

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Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 397
Target Start/End: Complemental strand, 36907681 - 36907634
Alignment:
Q  350 aaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||||    
T  36907681 aaggtagtttatgaaaaaacaacttgtgaatatacaattttcgttagt 36907634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 2019770 - 2019716
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    |||||||||||||||| | || ||||||||||||||   ||||||||||||||||    
T  2019770 ccgtttggattgacttattttagagcttatgcaaaacatcttatgcaaataaata 2019716  T

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Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 13265489 - 13265547
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 364  Q
    |||||||||||||||  |||||||||| |||||||||| | ||||| |||||| |||||    
T  13265489 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaagtagttcatgaa 13265547  T

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Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 320
Target Start/End: Original strand, 24350424 - 24350481
Alignment:
Q  263 ggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    |||||||||||| |||||| | |||||||||||| |||   |||||||||||||||||    
T  24350424 ggcccgtttggaatgacttatttttgagcttatgaaaactagcttatgcaaataaata 24350481  T

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Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 7638511 - 7638567
Alignment:
Q  289 agcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 345  Q
    ||||||||||||| || ||||||||||||||   |||||||||| |||| |||||||    
T  7638511 agcttatgcaaaactgtttatgcaaataaatcagcttttatgtattattaataagtt 7638567  T

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Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 368
Target Start/End: Complemental strand, 29243146 - 29243083
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 368  Q
    |||||||||||||||||  |||||||||| |||| |||||||  | |||||||||||| ||||||    
T  29243146 gcttatgcaaataaataagcttttatgtattatttataagtt-tttaaggtagtttattaaaaaa 29243083  T

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Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 401
Target Start/End: Original strand, 35055468 - 35055522
Alignment:
Q  350 aaggtagtttatgaaaaaacagc---ttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||||| | |   |||||||||||||| ||||||||||||||    
T  35055468 aaggtagtttatgaaaaaaaaaccatttatgaagatacaattttcgttagtgaga 35055522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 38195491 - 38195586
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||   |||||| || |||| |||||||  | ||||||||||| |||||||||| ||||| | |||||| ||| |||| |||||    
T  38195491 cttatgcaaataaataagtttttatatattatttataagttttt-aaggtagtttacgaaaaaacagtttatggaaatacaatttttgttaatgaga 38195586  T

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Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 80)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 28625483 - 28625580
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||  |||||| ||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28625483 gcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgaga 28625580  T

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Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 263 - 401
Target Start/End: Original strand, 42851984 - 42852121
Alignment:
Q  263 ggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg 362  Q
    |||||||| |||||| ||| | |||| ||||||||||||  |||||| ||||||||||  |||||||||| |||||||||| | |||||| |||||||||    
T  42851984 ggcccgttcggattggcttatttttgggcttatgcaaaacagcttattcaaataaataagcttttatgtattattcataagcttgtcaagatagtttatg 42852083  T
Q  363 aaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||| ||||| || |||||| ||||||||||||||    
T  42852084 aaaaaacaacttat-aaaatacaattttcgttagtgaga 42852121  T

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Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 262 - 386
Target Start/End: Original strand, 1473317 - 1473441
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 361  Q
    |||||| ||||||||  ||||| ||||||||||| || ||   ||||||||||||||||  |||||||||| |||||||||| | |||||| || |||||    
T  1473317 gggcccttttggatttgcttctttttgagcttatacagaacaacttatgcaaataaataagcttttatgtattattcataagcttgtcaagttaatttat 1473416  T
Q  362 gaaaaaacagcttatgaagatacaa 386  Q
    |||||||||||||||||||||||||    
T  1473417 gaaaaaacagcttatgaagatacaa 1473441  T

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Target: chr5; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 13060684 - 13060588
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||  |||||||||| | |||||||| | |||||||||||||||||||||||||||||||||| ||| | ||||||||||||||    
T  13060684 cttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagttaccattttcgttagtgaga 13060588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 306 - 394
Target Start/End: Original strand, 41534628 - 41534716
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtt 394  Q
    |||||||||||||||  |||||||||| |||||||||| | |||||||||||||| ||||||||||||||||||||||||| |||||||    
T  41534628 ttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgtt 41534716  T

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Target: chr5; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 268 - 401
Target Start/End: Original strand, 12467231 - 12467365
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaa 366  Q
    ||||||||| | || | |||||| |||| ||||||   |||||||||||||||  |||||||||| |||||||||| | |||||||||||||||| ||||    
T  12467231 gtttggattaaattatttttgagtttattcaaaaaatgttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 12467330  T
Q  367 aacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||| |||| ||| ||||||||||    
T  12467331 aacagcttatgaagagacaatttttgttagtgaga 12467365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 386
Target Start/End: Original strand, 14243792 - 14243909
Alignment:
Q  270 ttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat-gaaaaaa 368  Q
    |||||||||||| | |||||| ||||||||||  ||||||| |||||||||  ||| |||||| ||||||||||||| | |||||||||||| |||||||    
T  14243792 ttggattgacttatttttgagattatgcaaaacagcttatgtaaataaataagcttctatgtaatattcataagttgtttaaggtagtttatggaaaaaa 14243891  T
Q  369 cagcttatgaagatacaa 386  Q
    ||||||||||| ||||||    
T  14243892 cagcttatgaaaatacaa 14243909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 401
Target Start/End: Complemental strand, 29922291 - 29922175
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 384  Q
    |||||||||||||||||  | |||||||||||||||   ||||||||| |||||||||| | |||||||||||||||||||| |||||||||| | ||||    
T  29922291 tttgagcttatgcaaaacagtttatgcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttatgaaaacacagcttatgcatatac 29922192  T
Q  385 aaatttcgttagtgaga 401  Q
    || |||  |||||||||    
T  29922191 aattttttttagtgaga 29922175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 266 - 401
Target Start/End: Original strand, 1576596 - 1576730
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    |||||||||||| ||| |  ||| ||||||||||||  ||||| ||||||||||| ||||||||||| | |||||||| | ||||| |||||||||| ||    
T  1576596 ccgtttggattggcttattcttgggcttatgcaaaacagcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaa 1576694  T
Q  366 aaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||| ||| ||||||||||| ||| ||||||||||    
T  1576695 aaacaacttgtgaagatacaatttttgttagtgaga 1576730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 266 - 401
Target Start/End: Complemental strand, 1608219 - 1608085
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    |||||||||||| ||| |  ||| ||||||||||||  ||||| ||||||||||| ||||||||||| | |||||||| | ||||| |||||||||| ||    
T  1608219 ccgtttggattggcttattcttgggcttatgcaaaacagcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaa 1608121  T
Q  366 aaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||| ||| ||||||||||| ||| ||||||||||    
T  1608120 aaacaacttgtgaagatacaatttttgttagtgaga 1608085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 285 - 401
Target Start/End: Complemental strand, 22202038 - 22201918
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat----gaaaaaacagcttatgaag 380  Q
    |||||||||||||||||  ||||||| |||||||||  |||||||||| |||||||||| | |||||||||||||||    ||||||| ||||| |||||    
T  22202038 tttgagcttatgcaaaacagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaggaaaaaaaagcttgtgaag 22201939  T
Q  381 atacaaatttcgttagtgaga 401  Q
    |||||| ||||||||| ||||    
T  22201938 atacaattttcgttagcgaga 22201918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 334 - 401
Target Start/End: Original strand, 41419534 - 41419601
Alignment:
Q  334 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41419534 tattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgaga 41419601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 308 - 401
Target Start/End: Original strand, 1868853 - 1868946
Alignment:
Q  308 atgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||| ||||||||  |||||||||| |||||| ||| | ||||||||||||||||||||| || ||||||||||||||| ||||||||||||||    
T  1868853 atgctaataaataagcttttatgtattattcacaagcttgtcaaggtagtttatgaaaaatcaacttatgaagatacaattttcgttagtgaga 1868946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 268 - 401
Target Start/End: Original strand, 24030182 - 24030314
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 367  Q
    ||||||| |||||| | ||| ||||||| |||||  |||||| ||||||||||  |||||||||| |||||||||| | ||||| |||||||||||||||    
T  24030182 gtttggaatgacttatttttaagcttatacaaaacagcttatccaaataaataagcttttatgtattattcataagcttgtcaaagtagtttatgaaaaa 24030281  T
Q  368 acagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||| |||  || ||||||| ||||||||||||||    
T  24030282 aca-cttgcgaggatacaattttcgttagtgaga 24030314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 12987096 - 12987000
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||  |||||||||| | |||||||| | ||||||||||||||||||||||||| |||||||| ||| | ||| ||||||||||    
T  12987096 cttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagttaccatttttgttagtgaga 12987000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 17657246 - 17657342
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||  |||||||||| |||||||||| | | ||  |||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  17657246 cttatgcaaataaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgaga 17657342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 285 - 399
Target Start/End: Complemental strand, 2878778 - 2878665
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 384  Q
    ||||||||||||| |||  |||||||||||||||||  ||||||| || |||||||||||| ||||| || |||||||||| ||||| ||| ||||||||    
T  2878778 tttgagcttatgctaaacagcttatgcaaataaataagcttttatctattattcataagtttgtcaatgtggtttatgaaacaacagttta-gaagatac 2878680  T
Q  385 aaatttcgttagtga 399  Q
    || ||| ||||||||    
T  2878679 aatttttgttagtga 2878665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 399
Target Start/End: Original strand, 42706799 - 42706896
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat--gaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    |||||||||||||||||  |||||| ||| |||||||||| | |||||||||||||||   |||||||||||||||||||||||| |||||| |||||    
T  42706799 gcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttataaaaaaaaacagcttatgaagatacaattttcgtcagtga 42706896  T

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Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 366
Target Start/End: Original strand, 2670059 - 2670140
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 366  Q
    |||||||||||| ||||  | ||||||||||||| |  ||||||||||||||||||||||| ||||||||||||||||||||    
T  2670059 tttgagcttatgtaaaacagtttatgcaaataaacaatcttttatgtactattcataagtttgtcaaggtagtttatgaaaa 2670140  T

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Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 381
Target Start/End: Complemental strand, 3520621 - 3520509
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 367  Q
    |||||||||||||| | ||| |||||||||||||  | ||||| |||||||||  |||||| ||| |||||||||| | |||||||||||||| || |||    
T  3520621 gtttggattgacttattttttagcttatgcaaaacagtttatgtaaataaataacctttta-gtattattcataagcttgtcaaggtagtttaggacaaa 3520523  T
Q  368 acagcttatgaaga 381  Q
    ||||||||||||||    
T  3520522 acagcttatgaaga 3520509  T

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Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 15413959 - 15414088
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 367  Q
    |||||||||||||| | || ||||||||||||||  |||||||||||||||||    || ||||| |||| ||||||| || |||||||||||  |||||    
T  15413959 gtttggattgacttattttagagcttatgcaaaacagcttatgcaaataaataagtattaatgtattattgataagtttgttaaggtagtttactaaaaa 15414058  T
Q  368 acagcttatgaagatacaaatttcgttagt 397  Q
    ||| |||||||| |||||| ||| ||||||    
T  15414059 acaacttatgaatatacaatttttgttagt 15414088  T

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Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 41059872 - 41059775
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||| |||||  |||||||||| |||||||||| |  ||||||| |||||||||||| || ||||||||||| ||| ||||||||||||||    
T  41059872 gcttatgcaaacaaataagcttttatgtattattcataagcttatcaaggttgtttatgaaaaatcaccttatgaagattcaattttcgttagtgaga 41059775  T

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Target: chr5; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 401
Target Start/End: Original strand, 26002957 - 26003097
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    |||| ||||||||||| |||| | || |||||||| |||||  | |||||||||||||||   ||||||||| |||| ||||||| || ||| || ||||    
T  26002957 agggtccgtttggattaacttattttagagcttatacaaaacagtttatgcaaataaataagtttttatgtattatttataagtttgttaagttatttta 26003056  T
Q  361 tgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||   | |||||||||||||| ||||||||||||||    
T  26003057 tgaaaaagtggtttatgaagatacaattttcgttagtgaga 26003097  T

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Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 394
Target Start/End: Complemental strand, 31637158 - 31637087
Alignment:
Q  323 cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtt 394  Q
    |||||||||| |||||||||| | ||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  31637158 cttttatgtattattcataagcttgtcaaggtaatttatgaaagaacagcttatgaagatacaattttcgtt 31637087  T

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Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 402
Target Start/End: Complemental strand, 1372112 - 1371979
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 367  Q
    |||||||||||||| | |||||||||||||||||  | ||||| ||||||||| ||||||||||| |||| ||||| | || || || |||||||| |||    
T  1372112 gtttggattgacttatttttgagcttatgcaaaacagtttatgtaaataaatacacttttatgtattatttataagcttgtaaatgtggtttatga-aaa 1372014  T
Q  368 acagcttatgaagatacaaatttcgttagtgagac 402  Q
    |||| | ||||||||  || |||||||| ||||||    
T  1372013 acagttgatgaagatttaattttcgttaatgagac 1371979  T

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Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 324 - 401
Target Start/End: Complemental strand, 5559985 - 5559905
Alignment:
Q  324 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaa---cagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||| | |||||||| | ||||||||||||||||||||||   |||||||||||||||||| ||||||||||||||    
T  5559985 ttttatgtattcttcataagctcgtcaaggtagtttatgaaaaaaaagcagcttatgaagatacaattttcgttagtgaga 5559905  T

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Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 35536845 - 35536945
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcat---aagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgag 400  Q
    ||||||||||||| |||  |||||||||  |||||||   ||| | |||||| ||||||||||||||||||||||||||||||||| |||||||| ||||    
T  35536845 gcttatgcaaatacataagcttttatgtgttattcatcataagcttgtcaagatagtttatgaaaaaacagcttatgaagatacaattttcgttactgag 35536944  T
Q  401 a 401  Q
    |    
T  35536945 a 35536945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 40452561 - 40452463
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa-atttcgttagtgaga 401  Q
    |||||||||||  ||||  |||||||| | |||||||||| | |||||||||||||||||| |||||||||||||||||| ||  ||||||||||||||    
T  40452561 gcttatgcaaaggaataagcttttatgcattattcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataatttttcgttagtgaga 40452463  T

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Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 265 - 386
Target Start/End: Original strand, 341954 - 342075
Alignment:
Q  265 cccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 364  Q
    ||||||||||| | ||| | ||||||||||||||||    || ||| |||||||||   ||||||||| |||| | ||||| | ||||||||||||||||    
T  341954 cccgtttggatcggcttatttttgagcttatgcaaagcaactcatgtaaataaataagtttttatgtattatttacaagtttgccaaggtagtttatgaa 342053  T
Q  365 aaaacagcttatgaagatacaa 386  Q
    ||| ||||||||||||||||||    
T  342054 aaatcagcttatgaagatacaa 342075  T

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Target: chr5; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 286 - 371
Target Start/End: Complemental strand, 10537320 - 10537235
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacag 371  Q
    ||||||||||| ||||  |||||||||||||||||  |||||||||| |||| ||||| | |||||| ||||||||||||||||||    
T  10537320 ttgagcttatgtaaaacagcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagtttatgaaaaaacag 10537235  T

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Target: chr5; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 366
Target Start/End: Complemental strand, 11163395 - 11163290
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    ||||||||||||||||||||| | ||| |||||||||||||  ||||||| |||| ||||   |||||||||  ||||||||| | ||| ||||||||||    
T  11163395 agggcccgtttggattgacttattttttagcttatgcaaaacagcttatgtaaatcaataagtttttatgtatgattcataagcttgtcgaggtagttta 11163296  T
Q  361 tgaaaa 366  Q
    ||||||    
T  11163295 tgaaaa 11163290  T

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Target: chr5; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 406
Target Start/End: Original strand, 15122505 - 15122649
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    ||||||||||||||||  ||| | || ||||||||  ||||   |||||||||| |||||   ||||||||| |||| |||||||  | |||||||||||    
T  15122505 agggcccgtttggattagcttattttagagcttatataaaacaacttatgcaaagaaataagtttttatgtattatttataagttttt-aaggtagttta 15122603  T
Q  361 tgaaaaaacagcttatgaagatacaaatttcgttagtgagacatta 406  Q
    ||||||||||| |||||||||||||| ||||||  |||||| ||||    
T  15122604 tgaaaaaacagtttatgaagatacaattttcgtccgtgagaaatta 15122649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 273 - 366
Target Start/End: Original strand, 17128250 - 17128343
Alignment:
Q  273 gattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 366  Q
    ||||||||| | |||||||||||||||||  |||||||||||||||||  |||||||||| |||||||||  |  |||| ||||||||||||||    
T  17128250 gattgacttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataaacttatcaaagtagtttatgaaaa 17128343  T

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Target: chr5; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 28357355 - 28357452
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||  | | |||||| |||| ||||||| || || ||||||||||||||||||| |||||||| | ||| ||||||||||||||    
T  28357355 gcttatgcaaataaatatgcctatatgtattatttataagtttgttaatgtagtttatgaaaaaacagtttatgaaggtccaattttcgttagtgaga 28357452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 288 - 401
Target Start/End: Original strand, 43318990 - 43319103
Alignment:
Q  288 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaa 387  Q
    ||||||||||||||   ||||||||||||||||    |||||||| |||| ||||| | || || ||||||||||||||||||| |||||||| || ||     
T  43318990 gagcttatgcaaaacaacttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtataat 43319089  T
Q  388 tttcgttagtgaga 401  Q
    ||||||||||||||    
T  43319090 tttcgttagtgaga 43319103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 399
Target Start/End: Complemental strand, 13625604 - 13625508
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga-aaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    |||||||||||||||||  ||||||| || |||||||||| | ||  ||||||||||||| ||||||||||||| |||||| || ||||||||||||    
T  13625604 gcttatgcaaataaatatgcttttatttattattcataagcttgttgaggtagtttatgataaaaacagcttataaagataaaattttcgttagtga 13625508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 255 - 401
Target Start/End: Complemental strand, 7364441 - 7364295
Alignment:
Q  255 agctttagggcccgtttggattga-cttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaagg 353  Q
    |||||| |||||| |||||||||| ||| | |||||||||||| ||||  ||| ||||||| |||||  ||| ||| || |||||||||| | || ||||    
T  7364441 agcttttgggcccatttggattgagcttat-tttgagcttatgtaaaacagctgatgcaaaaaaataagcttctatttattattcataagcttgttaagg 7364343  T
Q  354 tagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||| || ||||| |||||||||||||||  || ||||||||||    
T  7364342 tagtttatcaacaaacaacttatgaagatacaatatttgttagtgaga 7364295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 401
Target Start/End: Complemental strand, 11912182 - 11912088
Alignment:
Q  307 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||| ||||||||  |||||||||| | |||||||  | ||||| ||||||| |||||||| ||||||||||||||||| ||| ||||||||||    
T  11912182 tatgctaataaataagcttttatgtattgttcataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaatttttgttagtgaga 11912088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 3977483 - 3977551
Alignment:
Q  309 tgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatg 377  Q
    |||||||||||| |||||| || | |||||||||| | ||||||||||||||||||||||||| |||||    
T  3977483 tgcaaataaataaacttttgtgcattattcataagcttgtcaaggtagtttatgaaaaaacagtttatg 3977551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 43268704 - 43268644
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 364  Q
    |||||||||||||||||  |||||||||| |||| ||||| ||||||||||||||||||||    
T  43268704 gcttatgcaaataaataagcttttatgtattattaataagctggtcaaggtagtttatgaa 43268644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 268 - 386
Target Start/End: Complemental strand, 40416091 - 40415973
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 367  Q
    ||||||||||| || |  | ||||||||||||||   ||||||||||||| || || || ||||| |||| ||||||| || ||||||||| ||||||||    
T  40416091 gtttggattgatttattatagagcttatgcaaaacaacttatgcaaataactaaacattaatgtattatttataagtttgttaaggtagttcatgaaaaa 40415992  T
Q  368 acagcttatgaagatacaa 386  Q
    ||| |||| ||| ||||||    
T  40415991 acaacttaagaatatacaa 40415973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 331
Target Start/End: Complemental strand, 1576816 - 1576743
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaat-gcttatgcaaataaatagacttttatgt 331  Q
    ||||||||||||||||||| ||| | |||||||||||| |||| | ||||||||||||||||| | ||||||||    
T  1576816 ttagggcccgtttggattggcttatttttgagcttatgaaaaattagcttatgcaaataaatacagttttatgt 1576743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 1607999 - 1608072
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaat-gcttatgcaaataaatagacttttatgt 331  Q
    ||||||||||||||||||| ||| | |||||||||||| |||| | ||||||||||||||||| | ||||||||    
T  1607999 ttagggcccgtttggattggcttatttttgagcttatgaaaaattagcttatgcaaataaatacagttttatgt 1608072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 401
Target Start/End: Original strand, 6144749 - 6144838
Alignment:
Q  312 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||  ||||||| || || ||||||| | ||||||||| |||||||||||| |||||||||| |||||| ||| ||||| ||||    
T  6144749 aaataaataagcttttatatattactcataagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaatttttgttagcgaga 6144838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 401
Target Start/End: Complemental strand, 38461357 - 38461268
Alignment:
Q  312 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||  | |||||||| |||| ||||||| || || ||| ||||||||||||||| ||||||||||| || ||| ||||||||||    
T  38461357 aaataaataagcctttatgtattatttataagtttgtaaatgtattttatgaaaaaacagtttatgaagatataatttttgttagtgaga 38461268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 11707015 - 11706919
Alignment:
Q  290 gcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 386  Q
    ||||||||||||  || ||||||||||||||  ||||||||||  |||| |||  | ||||| ||| |||||||| ||||| |||||||||||||||    
T  11707015 gcttatgcaaaacagcctatgcaaataaataagcttttatgtatcattcctaaacttgtcaatgtattttatgaagaaacaacttatgaagatacaa 11706919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 401
Target Start/End: Original strand, 11991273 - 11991404
Alignment:
Q  269 tttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 368  Q
    ||||||||||||| | ||   ||||||||||||   |||||| |||||||||  |||||||||| |||| ||||| | || ||  | |||||||||||||    
T  11991273 tttggattgacttattttaatgcttatgcaaaacaacttatgtaaataaataagcttttatgtattatttataagcttgtaaatatggtttatgaaaaaa 11991372  T
Q  369 cagcttatgaagatacaaatttcgttagtgaga 401  Q
     || ||||||| |||||| ||||||||||||||    
T  11991373 tag-ttatgaacatacaattttcgttagtgaga 11991404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 395
Target Start/End: Original strand, 28357187 - 28357235
Alignment:
Q  347 gtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 395  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  28357187 gtcaatgtagtttatgaaaaaacaggttatgaagatacaattttcgtta 28357235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 368
Target Start/End: Complemental strand, 42558842 - 42558740
Alignment:
Q  264 gcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga 363  Q
    |||| ||||||||||||| | |||| | ||||||||||  |||||||  ||||||||  |||||| |||||||||||||||| || || |||||||||||    
T  42558842 gcccatttggattgacttatttttg-gattatgcaaaacagcttatgtgaataaataagcttttacgtactattcataagtttgttaa-gtagtttatga 42558745  T
Q  364 aaaaa 368  Q
    |||||    
T  42558744 aaaaa 42558740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 258 - 397
Target Start/End: Complemental strand, 780696 - 780558
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 357  Q
    |||||||| ||||||||||  ||| | || ||||||||  ||||  | ||||||||||||||| | ||||||||| |||| |||||||  | ||||||||    
T  780696 tttagggctcgtttggattagcttattttagagcttatataaaacagtttatgcaaataaatacatttttatgtattatttataagtt-tttaaggtagt 780598  T
Q  358 ttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||  | |||| || |||||| |||| |||||    
T  780597 ttatgaaaaaatgggttatcaaaatacaattttcattagt 780558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 386
Target Start/End: Original strand, 40697004 - 40697091
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-----aaaaaacagcttatgaagatacaa 386  Q
    |||||||||||||||||   ||||||||| |||| ||||| | ||||||||| ||||||     ||||||||||||||||||||||||    
T  40697004 gcttatgcaaataaataagtttttatgtattatttataagcttgtcaaggtattttatgaagaaaaaaaacagcttatgaagatacaa 40697091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 394
Target Start/End: Complemental strand, 20458684 - 20458551
Alignment:
Q  260 tagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 359  Q
    |||||| ||||||||||  ||| | || ||||||||  ||||  ||||||||||||||||| | ||||||||| |||| |||||||  | ||||||||||    
T  20458684 tagggctcgtttggattagcttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataagtt-tttaaggtagttt 20458586  T
Q  360 atgaaaaaacagcttatgaagatacaaatttcgtt 394  Q
    || ||||||    ||||||| |||||| |||||||    
T  20458585 ataaaaaaatgtgttatgaaaatacaattttcgtt 20458551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 401
Target Start/End: Complemental strand, 29418836 - 29418738
Alignment:
Q  303 tgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||||    |||||||| |||| |||||   |  || ||||||||||||||||||  |||||||| ||||| ||||||||||||||    
T  29418836 tgcttatgcaaataaatatgtctttatgtattatttataagcatgctaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgaga 29418738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 384
Target Start/End: Original strand, 33757045 - 33757170
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 357  Q
    ||||| || ||||||||||  ||| | || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| |||||||  | ||| ||||    
T  33757045 tttagagctcgtttggattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagtt-tttaagctagt 33757143  T
Q  358 ttatgaaaaaacagcttatgaagatac 384  Q
    |||||||||||||| | ||||||||||    
T  33757144 ttatgaaaaaacagttaatgaagatac 33757170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 345
Target Start/End: Complemental strand, 35537028 - 35536945
Alignment:
Q  260 tagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 345  Q
    ||||| |||||||||||||||| | |||||| ||||| ||||  |||||||||||||||||  ||||||  || ||||||||||||    
T  35537028 tagggtccgtttggattgacttatttttgagattatgaaaaatagcttatgcaaataaataagctttta--tattattcataagtt 35536945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 268 - 329
Target Start/End: Complemental strand, 6125462 - 6125401
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 329  Q
    |||||||||||||||| ||||| |||||| ||||  |||||||||||||||||  |||||||    
T  6125462 gtttggattgacttctttttgaacttatgaaaaatagcttatgcaaataaataagcttttat 6125401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 306 - 367
Target Start/End: Original strand, 30852176 - 30852237
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 367  Q
    ||||||||||||||| ||||||||||| |||| ||||||| || || ||||||||| |||||    
T  30852176 ttatgcaaataaataaacttttatgtattattaataagttcgtaaatgtagtttataaaaaa 30852237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 7984109 - 7984205
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||| ||   ||||||||| |||||||||||| ||||| || ||||  |||||||||| |||  ||||||||| |||| | |||||||    
T  7984109 cttatgcaaataactaagtttttatgtattattcataagtttgtcaaagttgtttgagaaaaaacagtttacaaagatacaattttcataagtgaga 7984205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 17868105 - 17868177
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    ||||||| ||||||||||| ||| | ||| |||||||| ||||  |||||||||||||||||  |||||||||    
T  17868105 ttagggctcgtttggattggcttattttttagcttatggaaaatagcttatgcaaataaataaccttttatgt 17868177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 384
Target Start/End: Complemental strand, 33667519 - 33667396
Alignment:
Q  260 tagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 359  Q
    |||||||||||||||||  ||| | || ||||||||  ||||  |||||||||||||||||   ||||||||| |||| | |||||  | ||||||||||    
T  33667519 tagggcccgtttggattagcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttacaagtt-tttaaggtagttt 33667421  T
Q  360 atgaaaaaacagcttatgaagatac 384  Q
    |||| |||| ||  |||||||||||    
T  33667420 atgacaaaatagtatatgaagatac 33667396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 6026083 - 6025977
Alignment:
Q  288 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaa 387  Q
    |||||||| |||||  | |||||||||||||||   ||||||||| |||| |||| || || || ||||||||||||||||| | |||| |||||||||     
T  6026083 gagcttatacaaaatagtttatgcaaataaatatg-ttttatgtattatttataattttgttaacgtagtttatgaaaaaacggtttataaagatacaat 6025985  T
Q  388 tttcgtta 395  Q
    ||| ||||    
T  6025984 ttttgtta 6025977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 408
Target Start/End: Original strand, 6125291 - 6125393
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgagacat 404  Q
    |||||| ||||||||| ||||||||||| |||||||||  |  | || ||| |||||| ||||| |||||||||| ||||||  || |||||||||| ||    
T  6125291 cttatgtaaataaataaacttttatgtattattcataatcttataaatgtattttatg-aaaaatagcttatgaatatacaatatttgttagtgagaaat 6125389  T
Q  405 tatg 408  Q
    ||||    
T  6125390 tatg 6125393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 401
Target Start/End: Original strand, 16722032 - 16722126
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||   ||||||||| |||| |||| ||  | ||||||||||| ||| |||| | |||||||||||||  ||||||||||||||    
T  16722032 ttatgcaaataaataagtttttatgtattatttataaattttt-aaggtagtttacgaagaaaccgtttatgaagatacacttttcgttagtgaga 16722126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 320
Target Start/End: Complemental strand, 2577540 - 2577482
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    |||||||||||||||| ||| | ||| ||||||| |||||  |||||||||||||||||    
T  2577540 gggcccgtttggattggcttattttttagcttatccaaaacagcttatgcaaataaata 2577482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 361
Target Start/End: Original strand, 6150346 - 6150437
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 361  Q
    ||||||| ||| |||| | |||||| ||||||||||  |||||||||||| |      ||||||||| |||||||||||| |||||||||||||||    
T  6150346 ccgtttgaattcacttatttttgagtttatgcaaaacagcttatgcaaatgagg----ttttatgtattattcataagtttgtcaaggtagtttat 6150437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 386
Target Start/End: Complemental strand, 7111112 - 7110988
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 357  Q
    ||||||| ||||||||||||  || | ||| |||| ||||||||   | ||||||||||||||   | |||| || |||||||||| | |||||   |||    
T  7111112 tttaggggccgtttggattggtttattttttagctcatgcaaaataacctatgcaaataaataagttcttatttattattcataagattgtcaa---agt 7111016  T
Q  358 ttatgaaaaaacagcttatgaagatacaa 386  Q
    |||||||||| ||||||||||||||||||    
T  7111015 ttatgaaaaa-cagcttatgaagatacaa 7110988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 27806098 - 27806028
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaat-gcttatgcaaataaatagacttttatgt 331  Q
    |||||||||||||||| |||   ||| |||||||  |||||| ||||||||||||||||| ||||||||||    
T  27806098 gggcccgtttggattggcttactttttagcttattaaaaaatagcttatgcaaataaataaacttttatgt 27806028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 383
Target Start/End: Complemental strand, 27982026 - 27981916
Alignment:
Q  273 gattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagc 372  Q
    ||||||||| | ||||| ||||| |||||   |||||| ||||||||| | ||||||||| ||||||||| ||  |  ||||| |||||||||||||| |    
T  27982026 gattgacttatttttgaacttatacaaaacatcttatgaaaataaataaatttttatgtattattcataaatttatttaggtaatttatgaaaaaacaac 27981927  T
Q  373 ttatgaagata 383  Q
    | || ||||||    
T  27981926 taataaagata 27981916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 29659065 - 29659160
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||  |  |||||||| |||| ||||| | || || |||||||| |||||||||| |||||||  ||||| |||| |||||||||    
T  29659065 gcttatgcaaataaat--atgtttatgtattatttataagcttgttaatgtagtttaagaaaaaacagtttatgaaagtacaattttcattagtgaga 29659160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 41125671 - 41125733
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatg 330  Q
    |||||||||| ||| | |||||||||||||||||   |||||||||||||| || ||||||||    
T  41125671 gtttggattggcttatttttgagcttatgcaaaacaacttatgcaaataaacaggcttttatg 41125733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 366
Target Start/End: Original strand, 22573637 - 22573718
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 366  Q
    |||||||||||||||||   |||||||||||||||    |||| |||| |||| ||||||| || || ||||||||||||||    
T  22573637 tttgagcttatgcaaaacaacttatgcaaataaatgagtttttttgtattatttataagtttgtaaatgtagtttatgaaaa 22573718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 401
Target Start/End: Complemental strand, 23087842 - 23087765
Alignment:
Q  324 ttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||| |||| ||||| | || ||  ||||||||||||||||| || |||||| ||||| ||| ||||||||||    
T  23087842 ttttatgtattatttataagcttgttaatatagtttatgaaaaaacaactcatgaaggtacaatttttgttagtgaga 23087765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 33803874 - 33803814
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactat--tcataagttggtcaaggtagtttatgaa 364  Q
    |||||||||| ||||  ||||||||||||||  |||||| || ||||||||||||||||||    
T  33803874 ttatgcaaatcaataagcttttatgtactatattcataaatttgtcaaggtagtttatgaa 33803814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 386
Target Start/End: Original strand, 39990580 - 39990661
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 386  Q
    ||||| |||||||||| || || ||||| |||| ||| ||| || |||||| |||||||||||||| |||| ||| ||||||    
T  39990580 cttatacaaataaataaacattaatgtattatttatatgtttgttaaggtaatttatgaaaaaacatcttaagaatatacaa 39990661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 1943013 - 1943073
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 364  Q
    |||||||||| ||||||   ||||||||| ||| |||||| | ||||||||||||||||||    
T  1943013 gcttatgcaagtaaataagtttttatgtattatccataagcttgtcaaggtagtttatgaa 1943073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 379
Target Start/End: Original strand, 4728804 - 4728923
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    ||||||||| ||||||||   || | || ||||||||  ||||  |||||||||||||||||   ||||||||| |||  | |||||  | |||||||||    
T  4728804 ttagggcccatttggattaggttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatctacaagttttt-aaggtagtt 4728902  T
Q  359 tatgaaaaaacagcttatgaa 379  Q
    ||||||||||||| |||||||    
T  4728903 tatgaaaaaacagtttatgaa 4728923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 14244009 - 14243949
Alignment:
Q  260 tagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    ||||| |||||||||| ||||| | |||||||||||| ||||  |||| ||||||||||||    
T  14244009 tagggtccgtttggatagacttatttttgagcttatgaaaaatagcttttgcaaataaata 14243949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 399
Target Start/End: Original strand, 27805961 - 27806013
Alignment:
Q  347 gtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    ||||| ||||||||||||||||||  |||| ||||||||| ||| ||||||||    
T  27805961 gtcaatgtagtttatgaaaaaacatgttataaagatacaatttttgttagtga 27806013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 40452388 - 40452463
Alignment:
Q  269 tttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 345  Q
    ||||||||| ||| | |||||||||||| ||||  |||||||||||||||||  || ||||||  ||||||||||||    
T  40452388 tttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagctattatgt-ttattcataagtt 40452463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 361
Target Start/End: Original strand, 43010639 - 43010695
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 361  Q
    |||||| ||||||||| ||||||||||| |||||||| ||| ||||  |||||||||    
T  43010639 cttatgtaaataaataaacttttatgtattattcatacgtttgtcattgtagtttat 43010695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 273 - 401
Target Start/End: Complemental strand, 40581191 - 40581062
Alignment:
Q  273 gattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa-aaaacag 371  Q
    ||||||||| |||||||||||||||||||   ||||||||||||||||  |||||||||| |||| ||||| | |||||||||||||||||| |||||||    
T  40581191 gattgacttatctttgagcttatgcaaaacaacttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaaacag 40581092  T
Q  372 cttatgaagatacaaatttcgttagtgaga 401  Q
    | |||||||| |||| ||||||||||||||    
T  40581091 cgtatgaagaaacaattttcgttagtgaga 40581062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 269 - 401
Target Start/End: Complemental strand, 53218158 - 53218026
Alignment:
Q  269 tttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 368  Q
    ||||||||||||| | ||| |||||||||||||   ||||||| ||||||||   ||||||||| |||||||||| | ||||||||||||||||||||||    
T  53218158 tttggattgacttattttttagcttatgcaaaacaacttatgcgaataaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 53218059  T
Q  369 cagcttatgaagatacaaatttcgttagtgaga 401  Q
    || ||| ||||||||||| ||||||||||||||    
T  53218058 caacttttgaagatacaattttcgttagtgaga 53218026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 262 - 395
Target Start/End: Complemental strand, 22809319 - 22809185
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagttta 360  Q
    ||||| ||||| |||||||| | |||||| ||||||||||  |||||||||||||||||  ||||| || || |||||||||| | ||||||||||||||    
T  22809319 gggcctgtttgaattgacttatttttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagttta 22809220  T
Q  361 tgaaaaaacagcttatgaagatacaaatttcgtta 395  Q
    ||||||||| |||||||||||||||| ||||||||    
T  22809219 tgaaaaaactgcttatgaagatacaattttcgtta 22809185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 267 - 394
Target Start/End: Original strand, 10272088 - 10272213
Alignment:
Q  267 cgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 366  Q
    ||||||||||||||| | ||| |||||||||||||   || ||||||||||||| ||||||||||| |||||||||| |  |||||| ||||| ||||||    
T  10272088 cgtttggattgacttattttttagcttatgcaaaacaactcatgcaaataaataaacttttatgtattattcataagct--tcaaggcagtttctgaaaa 10272185  T
Q  367 aacagcttatgaagatacaaatttcgtt 394  Q
    |||||||||||| |||||||||||||||    
T  10272186 aacagcttatgaggatacaaatttcgtt 10272213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 262 - 401
Target Start/End: Original strand, 29270322 - 29270461
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttat 361  Q
    ||||| |||||||||||||| | |||||||||||||||||   |||||   ||||||||  |||||||||| |||||||||| |  ||||| || |||||    
T  29270322 gggcctgtttggattgacttatttttgagcttatgcaaaacaacttataggaataaataagcttttatgtattattcataagcttttcaagataatttat 29270421  T
Q  362 gaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  29270422 gaaaaaacagcttatgaagatacaattttcgttaatgaga 29270461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 263 - 401
Target Start/End: Complemental strand, 34707837 - 34707699
Alignment:
Q  263 ggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg 362  Q
    |||| |||||||||||||| | |||||||||||||||||   |||| | ||||| |||  |||||||||| |||||||||| | || |||||||||||||    
T  34707837 ggcctgtttggattgacttatttttgagcttatgcaaaacaacttacgtaaatatataagcttttatgtattattcataagcttgttaaggtagtttatg 34707738  T
Q  363 aaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||| | |||||||||| ||||||||| ||||    
T  34707737 aaaaaacagctaacgaagatacaattttcgttagcgaga 34707699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 52021249 - 52021347
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||  |||||||||| |||||||||| | |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||    
T  52021249 gcttatgcaaataaatatgcttttatgtattattcataagattgtcaaggtagtttatgaaaaaaacagcttatgaagatataattttcgttagtgaga 52021347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 43080017 - 43079928
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgt 393  Q
    |||||||||||||||||  |||||||||  |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  43080017 gcttatgcaaataaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgt 43079928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 285 - 383
Target Start/End: Original strand, 51409377 - 51409475
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 383  Q
    |||||||||||| ||||  |||||||||||||||||  ||||||| || ||||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  51409377 tttgagcttatggaaaatagcttatgcaaataaataatcttttatttattattcatgagtttgtcaaggtagtttatgaaaaaacaacttatgaagata 51409475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 40240660 - 40240563
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||| |  |||||||||| ||||||||||   ||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  40240660 gcttatgcaaataaagaagcttttatgtattattcataagcgtgtctaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtgaga 40240563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 401
Target Start/End: Original strand, 29614152 - 29614293
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    ||||||| |||||||||| |||| | || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||| ||  | |||||||||    
T  29614152 ttagggctcgtttggattaacttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagtt 29614250  T
Q  359 tatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  29614251 tatgaaaaaacagtttatgaagatacaattttcgttagtgaga 29614293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 397
Target Start/End: Original strand, 584985 - 585116
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    |||||||||||||||| | ||| |||||||| ||||    |||||||||||||||  |||||||| | |||||| ||| |  |  |||||||||||||||    
T  584985 ccgtttggattgacttatttttcagcttatgtaaaacacattatgcaaataaataagcttttatgcattattcaaaagcttcttgaggtagtttatgaaa 585084  T
Q  366 aaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||| ||||||||||||||| ||||||||||    
T  585085 aaacaacttatgaagatacaattttcgttagt 585116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 307 - 401
Target Start/End: Complemental strand, 48597947 - 48597853
Alignment:
Q  307 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||| ||| ||||||||  | |||||||||||| ||| ||||||| |||||||||||| ||||||||||||||| |||||| |||||||    
T  48597947 tatgcaaatacataaacttttataaattattcataagtttgtcgaggtagtgtatgaaaaaacaacttatgaagatacaattttcgtcagtgaga 48597853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 52421224 - 52421127
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||| |||||||||||  |||||||||| |||||||||| | |||||||||||||||||||||| || | |||||||||||| ||| ||||| ||||    
T  52421224 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatttttgttagcgaga 52421127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 267 - 386
Target Start/End: Complemental strand, 2086811 - 2086692
Alignment:
Q  267 cgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 366  Q
    ||||||||||| ||| | || |||||||||| |||  ||||||| ||||||||| ||||||||||| |||| ||||  | || ||||| |||||||||||    
T  2086811 cgtttggattggcttattttagagcttatgctaaacagcttatgtaaataaataaacttttatgtattatttataatcttgtaaaggtggtttatgaaaa 2086712  T
Q  367 aacagcttatgaagatacaa 386  Q
    || || ||||||||||||||    
T  2086711 aatagtttatgaagatacaa 2086692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 28741307 - 28741200
Alignment:
Q  294 atgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgt 393  Q
    ||||||||  |||||||||||||||||  | |||||||| || | ||||| | || || ||||||||||||||||||| |||||||| ||||| ||||||    
T  28741307 atgcaaaacagcttatgcaaataaatattcctttatgtattacttataagcttgttaaagtagtttatgaaaaaacagattatgaaggtacaattttcgt 28741208  T
Q  394 tagtgaga 401  Q
    ||||||||    
T  28741207 tagtgaga 28741200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 401
Target Start/End: Original strand, 3645261 - 3645402
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    ||||||| ||||||||||  ||| | || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||| ||  | |||||||||    
T  3645261 ttagggctcgtttggattagcttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagtt 3645359  T
Q  359 tatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||| | |||||||||||| ||||||||||||||    
T  3645360 tatgaaaaaacagttcatgaagatacaattttcgttagtgaga 3645402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 401
Target Start/End: Complemental strand, 42956258 - 42956165
Alignment:
Q  308 atgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||   ||||||||| |||||||||  | ||| | ||||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  42956258 atgcaaataaataagtttttatgtattattcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattttcgttagtgaga 42956165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 334 - 401
Target Start/End: Complemental strand, 23816224 - 23816157
Alignment:
Q  334 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||| ||| || |||||||    
T  23816224 tattcataagctattcaaggtagtttatgaaaaaacagcttatgaagatacaactttggtcagtgaga 23816157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 385
Target Start/End: Original strand, 3845822 - 3845939
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 367  Q
    |||| ||||| ||| | ||||||||||||||| |  | |||  ||||||||||  ||||||| || |||||||||| | |||||| |||||||||| |||    
T  3845822 gtttagattggcttatatttgagcttatgcaacacagattacacaaataaataagcttttatatattattcataagcttgtcaagctagtttatgacaaa 3845921  T
Q  368 acagcttatgaagataca 385  Q
    ||||| ||||||||||||    
T  3845922 acagcatatgaagataca 3845939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 373
Target Start/End: Original strand, 21296733 - 21296838
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 367  Q
    |||||||||||||| | |||||| ||||||||||    |||||||||||||||   |||||| || |||||||| |||  ||||||||||||||||||||    
T  21296733 gtttggattgacttatttttgagattatgcaaaacaatttatgcaaataaataagtttttatctattattcatacgtttatcaaggtagtttatgaaaaa 21296832  T
Q  368 acagct 373  Q
    | ||||    
T  21296833 atagct 21296838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 380
Target Start/End: Original strand, 10448761 - 10448853
Alignment:
Q  288 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaag 380  Q
    ||||||||||||||   ||||||||||||||||  | |||||||| |||| ||||| | || || ||||||||||||||||||| ||||||||    
T  10448761 gagcttatgcaaaacaacttatgcaaataaatatgcctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaag 10448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 392
Target Start/End: Complemental strand, 45331378 - 45331290
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcg 392  Q
    ||||||| |||||||||  |||||||||| ||| |||||| | || |||  |||||||||||||||| ||||||||||||||| |||||    
T  45331378 gcttatgtaaataaataaccttttatgtattatgcataagcttgttaagacagtttatgaaaaaacatcttatgaagatacaattttcg 45331290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 4257383 - 4257286
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa--cagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||   ||||||||| |||| |||||||  | |||||||||||||||||||  ||| |||||||||||||| ||||| ||||||||    
T  4257383 cttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaaacagtttatgaagatacaattttcgctagtgaga 4257286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 305 - 383
Target Start/End: Original strand, 7292684 - 7292762
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 383  Q
    |||||||||||| |||  || ||||||| |||||||||||| |||||  |||||||||||||||||| |||||| ||||    
T  7292684 cttatgcaaatacataagctcttatgtattattcataagtttgtcaatatagtttatgaaaaaacagtttatgatgata 7292762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 309 - 399
Target Start/End: Original strand, 10521162 - 10521252
Alignment:
Q  309 tgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    ||||||||||||  ||| |||||| |||||||||| | ||||| ||||||||||||| ||||  ||||||||||| || ||| ||||||||    
T  10521162 tgcaaataaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttagtga 10521252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 305 - 399
Target Start/End: Original strand, 10667402 - 10667496
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    |||| |||||||||||  ||| |||||| |||||||||| | ||||| ||||||||||||| ||||  ||||||||||| || ||| ||||||||    
T  10667402 cttacgcaaataaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttagtga 10667496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 259 - 401
Target Start/End: Original strand, 20894461 - 20894602
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    |||||| |||||||||||  ||| | || ||||||||  ||||  ||||||| |||||||||   ||||||||| |||| |||| ||  | || ||||||    
T  20894461 ttagggtccgtttggattagcttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataatttttt-aatgtagtt 20894559  T
Q  359 tatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    | ||||||||||| | |||||||||||| ||||||||||||||    
T  20894560 tttgaaaaaacagttcatgaagatacaattttcgttagtgaga 20894602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 305 - 386
Target Start/End: Complemental strand, 24842189 - 24842108
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtc-aaggtagtttatgaaaaaacagcttatgaagatacaa 386  Q
    |||||||||||||||| | ||||||||| |||||||||||| ||| || ||| |||||| ||||||| |||||||||||||||    
T  24842189 cttatgcaaataaataaatttttatgtattattcataagtttgtcaaatgtaatttatg-aaaaacaacttatgaagatacaa 24842108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 385
Target Start/End: Complemental strand, 3870309 - 3870228
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 385  Q
    ||||||||||| |||||  |||||||||  | |||||||| | |||||||||||||||||||||||| | ||||| ||||||    
T  3870309 gcttatgcaaaaaaataagcttttatgttttgttcataagcttgtcaaggtagtttatgaaaaaacaacatatgatgataca 3870228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 386
Target Start/End: Original strand, 4974268 - 4974396
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 357  Q
    ||||||| |||||||||||| ||| | || |||||||||||||   |||||||||||||||||  |  | ||||| |||| ||||  | |  ||||||||    
T  4974268 tttagggtccgtttggattggcttattttagagcttatgcaaagcagcttatgcaaataaataagcactaatgtattatttataaacttgctaaggtagt 4974367  T
Q  358 ttatgaaaaaacagcttatgaagatacaa 386  Q
    |||||||||||||  ||||||| ||||||    
T  4974368 ttatgaaaaaacaagttatgaatatacaa 4974396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 30473223 - 30473151
Alignment:
Q  307 tatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaa 379  Q
    |||||||||||||| || || ||||| |||| ||||| | || ||||||||||||||||||||| ||||||||    
T  30473223 tatgcaaataaataaacattaatgtattatttataaggttgttaaggtagtttatgaaaaaacaacttatgaa 30473151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 32901230 - 32901134
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||| |||||||||  ||||||| || |||||| || || || ||| |||||||| | |||||| |||||||||||| || ||||||||||||||    
T  32901230 cttatgtaaataaataagcttttatttattattcacaaatttgttaagatagtttataagaaaacaacttatgaagataaaattttcgttagtgaga 32901134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 401
Target Start/End: Complemental strand, 33946669 - 33946536
Alignment:
Q  260 tagggcccgtttggattga-cttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    ||||||||||||||||||| ||| | |||||||||||||||||  |||||||||||||||||  ||||||| || ||||    ||||    |||||| ||    
T  33946669 tagggcccgtttggattgagcttat-tttgagcttatgcaaaatagcttatgcaaataaataagcttttatttattatt----agtt----aaggtaatt 33946579  T
Q  359 tatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||| || |||||| ||||| || |||||||| |||||    
T  33946578 tatgaaaaaccaacttatgtagataaaattttcgttaatgaga 33946536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 43069079 - 43069131
Alignment:
Q  334 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaa 386  Q
    |||||||||||| |||||| |||||||||| |||||||||||||| |||||||    
T  43069079 tattcataagtttgtcaagatagtttatgagaaaacagcttatgaggatacaa 43069131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 40240482 - 40240548
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttat 329  Q
    |||||||||||||||||||| | |||||||||||| ||||  |||||||||||||||||  |||||||    
T  40240482 gggcccgtttggattgacttat-tttgagcttatgaaaaatagcttatgcaaataaataagcttttat 40240548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 242019 - 242081
Alignment:
Q  270 ttggattgacttctctttgagcttatgcaaaaat-gcttatgcaaataaatagacttttatgt 331  Q
    |||||||||||| | ||||| |||||| |||||| ||||||||||||||||| ||||||||||    
T  242019 ttggattgacttgtttttgatcttatgtaaaaatagcttatgcaaataaataaacttttatgt 242081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 380
Target Start/End: Complemental strand, 3876364 - 3876270
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaag 380  Q
    |||||||||| |||||  ||||||| ||||||||   ||||||| || |||||||||  | || ||||||||||||||||||||| |||| ||||    
T  3876364 ttgagcttatacaaaacagcttatgtaaataaattagcttttatttattattcataatctagttaaggtagtttatgaaaaaacaacttaagaag 3876270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 398
Target Start/End: Complemental strand, 50022007 - 50021958
Alignment:
Q  348 tcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtg 398  Q
    |||||||||||||||||||||||||||||| ||||| ||||||| ||||||    
T  50022007 tcaaggtagtttatgaaaaaacagcttatg-agataaaaatttcattagtg 50021958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 401
Target Start/End: Original strand, 7300410 - 7300463
Alignment:
Q  348 tcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||| |||||||||||||| || ||||| ||||||||| ||||||||||||||    
T  7300410 tcaagatagtttatgaaaaatcaacttataaagatacaattttcgttagtgaga 7300463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 401
Target Start/End: Complemental strand, 43971922 - 43971833
Alignment:
Q  312 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||  ||||||| || |||||| ||||| || ||  |||||||||| ||||||  ||||||||||| || ||||||||||||||    
T  43971922 aaataaataagcttttatttattattcacaagtttgttaaaatagtttatgagaaaacaatttatgaagataaaattttcgttagtgaga 43971833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 401
Target Start/End: Original strand, 20685837 - 20685885
Alignment:
Q  353 gtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||| |||||||| ||||||||||||||| |||| |||||||||    
T  20685837 gtagtttatcaaaaaacaacttatgaagatacaattttcattagtgaga 20685885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 23555441 - 23555521
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattc 338  Q
    ||||||| |||||||||||| ||| | ||||||||||| | |||  | |||||||||||||||  |||||||||| |||||    
T  23555441 tttagggtccgtttggattggcttatttttgagcttatacgaaacagtttatgcaaataaataagcttttatgtattattc 23555521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 391
Target Start/End: Original strand, 30383726 - 30383858
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    |||||| | |||||||||||||  | || ||||||||||||||  | |||||| |||||| |  | || ||||  |||| |||| || || |||||||||    
T  30383726 ttagggtcggtttggattgactaattttagagcttatgcaaaatagtttatgcgaataaagaagcattaatgtgttatttataaatttgttaaggtagtt 30383825  T
Q  359 tatgaaaaaacagcttatgaagatacaaatttc 391  Q
    |||||||||||| | |||||| |||||| ||||    
T  30383826 tatgaaaaaacaacctatgaatatacaattttc 30383858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 366
Target Start/End: Original strand, 36266249 - 36266309
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaa 366  Q
    ||||||||||||||| ||||||||||| |||| ||||||| || |||||| |||| |||||    
T  36266249 ttatgcaaataaataaacttttatgtattatttataagtttgttaaggtattttacgaaaa 36266309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 397
Target Start/End: Complemental strand, 20174973 - 20174930
Alignment:
Q  354 tagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||    
T  20174973 tagtttatgaaaaaacaacttatgaatatacaattttcgttagt 20174930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 401
Target Start/End: Original strand, 37778182 - 37778233
Alignment:
Q  350 aaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||||  | |||||||||||||| ||| ||||||||||    
T  37778182 aaggtagtttatgaaaaaatcggttatgaagatacaatttttgttagtgaga 37778233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 383
Target Start/End: Original strand, 11528875 - 11528973
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 383  Q
    ||||| |||||||||||   |||||| || ||||||  |||||||||| ||||||||| || || || ||||||||||| |||| |  |||||||||||    
T  11528875 tttgaacttatgcaaaacaacttatgtaagtaaataagcttttatgtattattcataaatttgttaatgtagtttatgataaaaaaaattatgaagata 11528973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 19307979 - 19308037
Alignment:
Q  339 ataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||| || ||||||||||||||||||||| | |||||| |||||| ||| ||||||    
T  19307979 ataagtttgttaaggtagtttatgaaaaaacaacctatgaatatacaatttttgttagt 19308037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 401
Target Start/End: Complemental strand, 29830680 - 29830625
Alignment:
Q  350 aaggtagtttatgaa----aaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||    ||||||| |||||||||||||| ||||||||||||||    
T  29830680 aaggtagtttatgaaaaaaaaaacagtttatgaagatacaattttcgttagtgaga 29830625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 52895309 - 52895378
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    ||||||||||||||| | || | |||||||||||| |||| || ||| |||||||||||  |||||||||    
T  52895309 gggcccgtttggatttatttatttttgagcttatgaaaaattgtttaggcaaataaataagcttttatgt 52895378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 20685961 - 20685909
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    |||||||||||||| | ||| |||||||| |||| ||||||| ||||||||||    
T  20685961 gtttggattgacttattttttagcttatgaaaaattgcttatccaaataaata 20685909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 30499934 - 30500010
Alignment:
Q  269 tttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagtt 345  Q
    |||||||| |||| | || |||||||| |||||  | ||||||||||||||| | ||||||||| |||| |||||||    
T  30499934 tttggattaacttattttagagcttatacaaaacagtttatgcaaataaataaatttttatgtattatttataagtt 30500010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 35480303 - 35480362
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaat 319  Q
    |||||||| |||||||||||||| | |||||||||||| ||||   |||||||||||||||    
T  35480303 ttagggcctgtttggattgacttatttttgagcttatg-aaaataacttatgcaaataaat 35480362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 43079836 - 43079896
Alignment:
Q  260 tagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaata 320  Q
    |||||||||||||||||||||| | |  ||||||||| ||||  |||||| ||||||||||    
T  43079836 tagggcccgtttggattgacttatttacgagcttatgaaaaatagcttattcaaataaata 43079896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 97289 - 97195
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||  || ||||||| |||||||||| | ||||||||||||||||||||||||||||||   ||||||| ||||||||||||||    
T  97289 gcttatgcaaataaataagctattatgtagtattcataagctagtcaaggtagtttatgaaaaaacagcttat---gatacaattttcgttagtgaga 97195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 97106 - 97175
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagactttt 327  Q
    |||||||| ||||||||||||||| | ||||||||| |||||||  ||| ||||||||||| || |||||    
T  97106 tttagggctcgtttggattgacttatttttgagcttttgcaaaacagctaatgcaaataaaaaggctttt 97175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 5e-23; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 286 - 401
Target Start/End: Original strand, 2255719 - 2255834
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 385  Q
    ||||||||||||||||   |||||||||||||||   ||||||||||  ||||||||| | || |||||| |||||||||||||||||||||||||||||    
T  2255719 ttgagcttatgcaaaacgacttatgcaaataaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagataca 2255818  T
Q  386 aatttcgttagtgaga 401  Q
    | ||| | ||||||||    
T  2255819 atttttggtagtgaga 2255834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 394
Target Start/End: Complemental strand, 21891466 - 21891331
Alignment:
Q  259 ttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtt 358  Q
    |||||||||||||||||||| |  | |||||||||||||| ||  |||||||||||||||||   ||| || || |||||||||| | ||||| ||||||    
T  21891466 ttagggcccgtttggattgattaatttttgagcttatgcagaatagcttatgcaaataaataagttttgatatattattcataagcttgtcaatgtagtt 21891367  T
Q  359 tatgaaaaaacagcttatgaagatacaaatttcgtt 394  Q
    ||||||| |||| |||||||||||| || |||||||    
T  21891366 tatgaaataacaacttatgaagatagaattttcgtt 21891331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 268 - 408
Target Start/End: Complemental strand, 25430882 - 25430745
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaa 366  Q
    |||||||||||||| | |||||||||||| ||||  |||||| ||||||||||  | ||||||   |||||||||| | |||||||||||||||| ||||    
T  25430882 gtttggattgacttatttttgagcttatgtaaaacagcttatacaaataaataagcatttatg---tattcataagcttgtcaaggtagtttatgaaaaa 25430786  T
Q  367 aacagcttatgaagatacaaatttcgttagtgagacattatg 408  Q
    |||||||||||||||||| ||||| || ||||||| ||||||    
T  25430785 aacagcttatgaagatac-aattttgtcagtgagaaattatg 25430745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 401
Target Start/End: Original strand, 7267737 - 7267875
Alignment:
Q  263 ggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg 362  Q
    ||||| ||||||||| ||| | ||| |||||| | ||||  ||||||||||| |||||  |||||||||| |||||||||| | | ||||||||||||||    
T  7267737 ggcccatttggattggcttgttttttagcttaagtaaaacggcttatgcaaacaaataagcttttatgtattattcataagcttgccaaggtagtttatg 7267836  T
Q  363 aaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||| ||||||||| ||||| ||||| | ||||||    
T  7267837 aaaaaacaacttatgaaggtacaattttcgctggtgaga 7267875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 2027259 - 2027166
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||||  |||||||| | |||||| ||||| ||||||  |||||||||||||||||||||||||||||||| ||| ||||||    
T  2027259 gcttatgcaaataaataagcttttatgcattattcagaagtttgtcaagacagtttatgaaaaaacagcttatgaagatacaacttttgttagt 2027166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 393
Target Start/End: Complemental strand, 2034312 - 2034223
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgt 393  Q
    |||||||||||||||||  |||||||||| |||| ||||||| |||||||||||||||||||||||| ||||  ||||||||| ||||||    
T  2034312 gcttatgcaaataaataagcttttatgtattatttataagtttgtcaaggtagtttatgaaaaaacaacttaccaagatacaattttcgt 2034223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 255 - 399
Target Start/End: Original strand, 8014743 - 8014886
Alignment:
Q  255 agctttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggt 354  Q
    ||||||||| ||| ||||||||| ||| | |||||| ||||  ||||  |||||||||||||| ||  |||||||  | |||||||||| | ||||||||    
T  8014743 agctttaggacccatttggattggcttat-tttgagtttatagaaaacagcttatgcaaataagtaagcttttattcattattcataagcttgtcaaggt 8014841  T
Q  355 agtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    ||||||||||||||| || ||||||||||||| ||| ||||||||    
T  8014842 agtttatgaaaaaactgcatatgaagatacaattttggttagtga 8014886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 286 - 401
Target Start/End: Original strand, 6758612 - 6758727
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 385  Q
    ||||||||||||||||   ||||||||||||||||  ||||| | || ||| |||||| | || ||||||||||||||||||  | ||||| ||||||||    
T  6758612 ttgagcttatgcaaaacaacttatgcaaataaataagcttttgtttattatccataagcttgttaaggtagtttatgaaaaattaacttatcaagataca 6758711  T
Q  386 aatttcgttagtgaga 401  Q
    ||||||||||||||||    
T  6758712 aatttcgttagtgaga 6758727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 6776811 - 6776908
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||  ||||||| || ||| |||||| | || ||||||||||||| ||||| | |||||||||||||||||||| |||||||||    
T  6776811 gcttatgcaaataaataagcttttatttaatatccataagcttgttaaggtagtttatggaaaaataacttatgaagatacaaatttcattagtgaga 6776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 24625811 - 24625936
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    |||||| |||||||||| ||| | |||||| ||| |||| |   | ||||||||||||||  |||||||||| |||||||||| | || |||||||||||    
T  24625811 agggcctgtttggattgtcttatttttgaggttaggcaagacaacatatgcaaataaatacgcttttatgtattattcataagcttgttaaggtagttta 24625910  T
Q  361 tgaaaaaacagcttatgaagatacaa 386  Q
    |||||||  |||||||||||||||||    
T  24625911 tgaaaaattagcttatgaagatacaa 24625936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 397
Target Start/End: Original strand, 17914906 - 17915041
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    ||||| |||||||||| |||| | || ||||||||  ||||  ||||||||||||||||| | ||||||||| |||| |||||||  | |||||||||||    
T  17914906 agggctcgtttggattaacttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataagtt-tttaaggtagttta 17915004  T
Q  361 tgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||||  | ||||||| |||||| ||||||||||    
T  17915005 tgaaaaaatgggttatgaaaatacaattttcgttagt 17915041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 304 - 400
Target Start/End: Complemental strand, 21025310 - 21025214
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgag 400  Q
    |||||||||||||||||  |||||||||| ||| |||||| | || ||||||||||||||||||| ||| |||||||||||||  ||||||| ||||    
T  21025310 gcttatgcaaataaataagcttttatgtattatgcataagcttgttaaggtagtttatgaaaaaagagcctatgaagatacaatgttcgttactgag 21025214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 401
Target Start/End: Complemental strand, 29623578 - 29623463
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagataca 385  Q
    ||||||||||||||||   ||||||||||||||||  ||||||| || |||| || |||| || || |||||||||||||||||| |||||||| ||| |    
T  29623578 ttgagcttatgcaaaacaacttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttatgaaaaaacaacttatgaaaataaa 29623479  T
Q  386 aatttcgttagtgaga 401  Q
      ||||||||||||||    
T  29623478 gttttcgttagtgaga 29623463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 367
Target Start/End: Original strand, 30533964 - 30534046
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaa 367  Q
    ||||||||| |||||||  |||||||||||||||||  |||||||||| |||||||||||| || || |||||||||||||||    
T  30533964 tttgagcttgtgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaa 30534046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 29052336 - 29052433
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||| |||| ||||| ||||||||||| |||| ||||||| || |||||| ||||||||||||||| |||||| ||||||| | ||||| ||||||    
T  29052336 gcttatacaaaaaaataaacttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtttatgatgatacaattctcgtttgtgaga 29052433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 285 - 399
Target Start/End: Original strand, 10873970 - 10874082
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 384  Q
    |||||| ||||||||||  ||||||||| |||||||  ||||||| |  |||| ||||| | || |||||||||||||| ||||||||||||||||||||    
T  10873970 tttgagattatgcaaaatagcttatgcatataaataagcttttatat--tattaataagcttgttaaggtagtttatgagaaaacagcttatgaagatac 10874067  T
Q  385 aaatttcgttagtga 399  Q
    || ||| ||| ||||    
T  10874068 aattttagttggtga 10874082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 258 - 401
Target Start/End: Complemental strand, 32615543 - 32615401
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 357  Q
    ||||| ||||||||||||| |||| | ||  |||||||  ||||  |||||||||||||||||   ||||||||| |||| |||| ||  | ||||||||    
T  32615543 tttagagcccgtttggattaacttattttatagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataaattttt-aaggtagt 32615445  T
Q  358 ttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    | ||||||||||   |||||||||||||| ||||||||||||||    
T  32615444 tgatgaaaaaactatttatgaagatacaattttcgttagtgaga 32615401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 401
Target Start/End: Complemental strand, 3211120 - 3210982
Alignment:
Q  268 gtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg----- 362  Q
    |||||||| | ||| | ||| ||||| |||||||  |||||||||||||||||  |||||||||| || | ||||| | ||||| ||||||||||         
T  3211120 gtttggatcggcttattttttagcttgtgcaaaacagcttatgcaaataaataagcttttatgtattactgataagcttgtcaatgtagtttatgaagaa 3211021  T
Q  363 aaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||||||||||||||| |||| ||| |||||    
T  3211020 aaaaaacagcttatgaagatacaattttcattaatgaga 3210982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 1240693 - 1240596
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa-cagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||| ||||||||||  |||||||||| |||||||||| | ||||||||| |||| ||||||| || ||||||||||||| | |||| |||||||||    
T  1240693 cttattcaaataaataagcttttatgtattattcataagcttgtcaaggtaatttacgaaaaaaacaacttatgaagatacgattttcattagtgaga 1240596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 368
Target Start/End: Original strand, 9894728 - 9894833
Alignment:
Q  263 ggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg 362  Q
    ||||||||||||||  ||| | || |||||||| |||||  ||||| |||||||||||  |||||||||| |||| ||||||| || |||||| ||||||    
T  9894728 ggcccgtttggattagcttattttcgagcttatacaaaacagcttacgcaaataaataatcttttatgtattatttataagtttgttaaggtattttatg 9894827  T
Q  363 aaaaaa 368  Q
    ||||||    
T  9894828 aaaaaa 9894833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 32675971 - 32675875
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataag-ttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||  ||||||| || |||||||||| || || ||||| ||||||||||||| | ||||||||||||||| |||| |||||||||    
T  32675971 cttatgcaaataaataagcttttatttattattcataagcttcgt-aaggttgtttatgaaaaaataacttatgaagatacaattttcattagtgaga 32675875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 34801132 - 34801036
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||| ||||||||| |||||||| || ||||||||||||||| ||| ||||||||||||||||| | || | |||||||| |||  |||||||||    
T  34801132 gcttatgtaaataaataaacttttatttattattcataagttggt-aagatagtttatgaaaaaacaacctacggagatacaattttaattagtgaga 34801036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 368
Target Start/End: Original strand, 10054384 - 10054448
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 368  Q
    |||||||||||||||||  |||||||||| |||||||||||| || || ||||||||||||||||    
T  10054384 gcttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaaa 10054448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 32165295 - 32165247
Alignment:
Q  353 gtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  32165295 gtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgaga 32165247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 401
Target Start/End: Original strand, 10687273 - 10687410
Alignment:
Q  267 cgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtact---attcataagttggtcaaggtagtttatga 363  Q
    ||||| ||||||| | | ||||||||||| |||||  |||||||||||||||||  |||| ||||| |   |||||||||    | |||||||||||||     
T  10687273 cgtttcgattgacgtatttttgagcttattcaaaacagcttatgcaaataaataagctttgatgtatttttattcataagcctattaaggtagtttatgt 10687372  T
Q  364 aaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||| |||||| |||||||| ||||||||| ||||    
T  10687373 aaaaacaacttatggagatacaattttcgttagcgaga 10687410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Complemental strand, 10755363 - 10755288
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaa 379  Q
    |||||||||||||||||  |||||| ||| |||||||||| | |||||||||  ||||||||||| ||||||||||    
T  10755363 gcttatgcaaataaataagcttttacgtattattcataagcttgtcaaggtaacttatgaaaaaatagcttatgaa 10755288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 401
Target Start/End: Original strand, 16589756 - 16589851
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||| ||||||||  | ||||||||| |||||||||||| ||||| | ||||||||||||||||  |||||||||||  | |||||||| |||||    
T  16589756 ttatgtaaataaattaatttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagatatgattttcgttattgaga 16589851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 401
Target Start/End: Complemental strand, 16605624 - 16605529
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||| ||||||||  | ||||||||| |||||||||||| ||||| | ||||||||||||||||  |||||||||||  | |||||||| |||||    
T  16605624 ttatgtaaataaattaatttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagatatgattttcgttattgaga 16605529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 400
Target Start/End: Complemental strand, 21871365 - 21871271
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgag 400  Q
    ||||||||||||| || ||||||||||| |||| |||| ||| |||||||||||||||| |||  ||||||||| |||  || |||||||||||||    
T  21871365 cttatgcaaataagtaaacttttatgtattattgataacttg-tcaaggtagtttatgagaaagtagcttatgatgatttaattttcgttagtgag 21871271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 383
Target Start/End: Complemental strand, 3830021 - 3829923
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 383  Q
    |||||||||||| ||||  |||||||||||||||||  ||||||| |  |||||||||  |  | | ||||||||||||||||||| ||||||||||||    
T  3830021 tttgagcttatgaaaaacggcttatgcaaataaatacgcttttatttgttattcataaagtttttatggtagtttatgaaaaaacaacttatgaagata 3829923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 397
Target Start/End: Complemental strand, 21610148 - 21610039
Alignment:
Q  288 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaa 387  Q
    ||||||||||||||  |||||||||||||||||    |||||| | |||| ||||| | || || |||||||||||||||| || ||||||| ||| ||     
T  21610148 gagcttatgcaaaacagcttatgcaaataaatatttctttatgaattatttataagcttgttaatgtagtttatgaaaaaatagtttatgaatatataat 21610049  T
Q  388 tttcgttagt 397  Q
    ||||||||||    
T  21610048 tttcgttagt 21610039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 380
Target Start/End: Original strand, 6632646 - 6632738
Alignment:
Q  288 gagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaag 380  Q
    |||||||| |||||   ||||||||||||||||  |||||||||| |||| ||||  | || || |||||||||||||||||| |||||||||    
T  6632646 gagcttattcaaaacaacttatgcaaataaatatgcttttatgtattatttataaacttgttaatgtagtttatgaaaaaacaacttatgaag 6632738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 401
Target Start/End: Original strand, 6958649 - 6958724
Alignment:
Q  326 ttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||  ||||||||| |  |||||||||||| ||||||| |||||| ||||||||||| |||| |||||||||    
T  6958649 ttatgtatcattcataagcttctcaaggtagtttgtgaaaaagcagcttgtgaagatacaattttctttagtgaga 6958724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 388
Target Start/End: Original strand, 10619202 - 10619314
Alignment:
Q  274 attgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagct 373  Q
    |||||||| | || ||||||||| |||   ||||||||||||||||  |  || ||||| ||||  |||||| || ||||||||||||||||||||| ||    
T  10619202 attgacttattttagagcttatgtaaagcagcttatgcaaataaatgca--ttaatgtattatttgtaagtttgttaaggtagtttatgaaaaaacaact 10619299  T
Q  374 tatgaagatacaaat 388  Q
    |||||| ||||||||    
T  10619300 tatgaatatacaaat 10619314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 401
Target Start/End: Original strand, 23239212 - 23239347
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaa 365  Q
    ||||||||||||| ||   |||||||||||| ||||   ||||| ||||||||||  ||||||| || |||||||||| | || || || |||||| |||    
T  23239212 ccgtttggattgagtttattttgagcttatgaaaaataacttatacaaataaataagcttttatttattattcataagcttgttaacgtggtttatcaaa 23239311  T
Q  366 aaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    || ||  |||||| ||||||| |||| |||||||||    
T  23239312 aagcaaattatgacgatacaactttccttagtgaga 23239347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 4808575 - 4808667
Alignment:
Q  304 gcttatgcaaataaatagactttt-atgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||| || |||| ||||| |||| |||||||  | ||| |||||||||||||||||| ||||||||||||||  |||||||||    
T  4808575 gcttatgcaaataaat-gagttttcatgtattatttataagttttt-aagatagtttatgaaaaaacagtttatgaagatacaatattcgttagt 4808667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 10184412 - 10184320
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    ||||||| |||||||||   |||||| || |||| |||||||  | |||||||||||||||||||||  ||||||||| |||| ||||||||||    
T  10184412 gcttatgtaaataaataagtttttatctattatttataagttttt-aaggtagtttatgaaaaaacaatttatgaagaaacaattttcgttagt 10184320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 391
Target Start/End: Original strand, 13429488 - 13429545
Alignment:
Q  334 tattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttc 391  Q
    |||||||||| | ||||| ||||||||||||||||||| |||||| ||||||| ||||    
T  13429488 tattcataagcttgtcaaagtagtttatgaaaaaacagtttatgaggatacaattttc 13429545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 34509934 - 34509994
Alignment:
Q  323 cttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 383  Q
    |||||||||| |||||||||||| ||||| | ||||||||| |||| || |||||||||||    
T  34509934 cttttatgtattattcataagtttgtcaatggagtttatgataaaagagtttatgaagata 34509994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 399
Target Start/End: Complemental strand, 9202438 - 9202387
Alignment:
Q  348 tcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    |||||| |||||||||||||||||| ||||||||||||| |||  |||||||    
T  9202438 tcaaggcagtttatgaaaaaacagcatatgaagatacaatttttattagtga 9202387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 399
Target Start/End: Original strand, 34413331 - 34413417
Alignment:
Q  312 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtga 399  Q
    ||||||||||| ||||||||| |||| ||||||| || || ||||||||||||||||||  |||| || |||||| |||  |||||||    
T  34413331 aaataaataga-ttttatgtattatttataagtttgtaaatgtagtttatgaaaaaacaatttataaacatacaattttatttagtga 34413417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 2040287 - 2040209
Alignment:
Q  286 ttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaa 364  Q
    ||||||||||||||||   |||||  |||||||||  ||||||| || |||||||||||| || |||||| ||||||||    
T  2040287 ttgagcttatgcaaaacaacttatataaataaataagcttttatttattattcataagtttgttaaggtaatttatgaa 2040209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 363
Target Start/End: Complemental strand, 12817174 - 12817116
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatga 363  Q
    ||||||||||||||||  |||| ||||| |||||||||| | ||||| |||||||||||    
T  12817174 cttatgcaaataaataagctttaatgtattattcataagctagtcaatgtagtttatga 12817116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 1468179 - 1468270
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||||   ||||||||| |||| ||| |||  | ||||||||||||| |||||||| ||||||||| || | ||||||||||    
T  1468179 gcttatgcaaataaataagtttttatgtattatttataggtt-tttaaggtagtttatg-aaaaacagtttatgaagaaaccattttcgttagt 1468270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 395
Target Start/End: Original strand, 4272387 - 4272476
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgtta 395  Q
    |||||||||||||||   ||||||||| ||| ||||||||  | || ||||||||| ||||||||  |||| |||| |||| ||||||||    
T  4272387 ttatgcaaataaataactttttatgtattatacataagtttataaatgtagtttataaaaaaacaatttataaagaaacaattttcgtta 4272476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 11795524 - 11795577
Alignment:
Q  265 cccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaa 318  Q
    ||||||||||||||||| | | |||||||||||||||  | |||||||||||||    
T  11795524 cccgtttggattgacttatttctgagcttatgcaaaacagattatgcaaataaa 11795577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 12816805 - 12816874
Alignment:
Q  262 gggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    ||||| ||||||||| |||| | |||||||||||| ||||  | |||||||||||||||  |||||||||    
T  12816805 gggcctgtttggattaacttatttttgagcttatgaaaaatagtttatgcaaataaataagcttttatgt 12816874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 343
Target Start/End: Complemental strand, 35111456 - 35111379
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataag 343  Q
    |||||||||||| ||  | ||| |||||||||||||  ||||||||||||||| |  |||||| ||| ||||||||||    
T  35111456 ccgtttggattggctaatttttaagcttatgcaaaacagcttatgcaaataaacaagcttttaagtaatattcataag 35111379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 6752809 - 6752861
Alignment:
Q  291 cttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataag 343  Q
    |||||||||||| ||||||| ||||||||| | |||||| || ||||||||||    
T  6752809 cttatgcaaaaaagcttatgtaaataaataaatttttatttattattcataag 6752861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 397
Target Start/End: Complemental strand, 8011173 - 8011034
Alignment:
Q  260 tagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttt 359  Q
    ||||| |||||||||||| ||| | || ||||||||| | |   ||| ||| |||||||||  | || || || |||| ||||||| |||||||||||||    
T  8011173 tagggtccgtttggattggcttattttagagcttatgtacagtagctaatgaaaataaataagcattaatatattatttataagtttgtcaaggtagttt 8011074  T
Q  360 atg--aaaaaacagcttatgaagatacaaatttcgttagt 397  Q
     ||  |||||| | |||||||| |||||| ||||||||||    
T  8011073 ttgaaaaaaaaaaacttatgaatatacaattttcgttagt 8011034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 401
Target Start/End: Original strand, 24733 - 24847
Alignment:
Q  289 agcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaa--ggtagtttatgaaaaaacagcttatgaagatacaa 386  Q
    |||||| ||||||  |||||||||||||||||  |||||||||| |||||||||| | |||||  |||||||||||||||||||||| || |||||||||    
T  24733 agcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaa 24832  T
Q  387 atttcgttagtgaga 401  Q
      ||| |||||||||    
T  24833 tattcattagtgaga 24847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 285 - 399
Target Start/End: Complemental strand, 58970 - 58856
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatac 384  Q
    ||||||||||||||||||  ||| || ||||||||| || |||||||| ||||| |||||| ||||| |||||||||||||||  |  ||||||||||||    
T  58970 tttgagcttatgcaaaaaaccttgtggaaataaataaacgtttatgtattattcttaagtttgtcaatgtagtttatgaaaaagtattttatgaagatac 58871  T
Q  385 aaatttcgttagtga 399  Q
    || || |||||||||    
T  58870 aatttccgttagtga 58856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 14829 - 14732
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||| ||||||||||  |||||||||| ||||||||||||  | || ||||||||||||||| ||| |||| || |||||| ||||||||||||||    
T  14829 gcttatacaaataaataagcttttatgtattattcataagtttttaaatgtagtttatgaaaaatcagtttataaatatacaattttcgttagtgaga 14732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 24491 - 24379
Alignment:
Q  284 ctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagata 383  Q
    |||||||||| | |||||  |||||||||||||||||| ||| |||||| |||||||||| | |||||||||||| || ||| |||| |||| |||||||    
T  24491 ctttgagcttctacaaaacagcttatgcaaataaatag-cttgtatgtattattcataagcttgtcaaggtagttgataaaataacaacttacgaagata 24393  T
Q  384 caaatttcgttagt 397  Q
     || ||||||||||    
T  24392 taattttcgttagt 24379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 368
Target Start/End: Complemental strand, 43918 - 43835
Alignment:
Q  285 tttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaa 368  Q
    ||||||||||| |||||  || ||||||||||||||   ||||||||| |||||| ||| | ||| ||||||||||| ||||||    
T  43918 tttgagcttatacaaaacagcatatgcaaataaataagtttttatgtattattcaaaagcttgtcgaggtagtttataaaaaaa 43835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 397
Target Start/End: Original strand, 178460 - 178597
Alignment:
Q  261 agggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagttta 360  Q
    |||| ||||||||||| |||| | ||||| ||||| | |||   ||||||||||||||||  |||||||||| |||| |||||||  | |||||| ||||    
T  178460 agggtccgtttggattaacttatttttgaacttatactaaacaacttatgcaaataaataagcttttatgtattatttataagtttcttaaggtatttta 178559  T
Q  361 tg-aaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    || |||||| || |||||||||||||| ||||||||||    
T  178560 tgaaaaaaatagtttatgaagatacaattttcgttagt 178597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 1062 - 1158
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||  ||||||| || ||| |||||| | || |||||| |||||| ||||| | |||||||||||||||||||| |||||||||    
T  1062 cttatgcaaataaataagcttttatttattatccataagattgttaaggtaatttatggaaaaataacttatgaagatacaaatttcattagtgaga 1158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 227709 - 227803
Alignment:
Q  304 gcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatg-aaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||| ||||||||  | || ||||| |||| ||||||| || ||||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  227709 gcttatgcgaataaataagcattaatgtagtatttataagtttgttaaggtagtttatgaaaaaaacagcttatgaatatacaattttcgttagt 227803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 258 - 401
Target Start/End: Complemental strand, 242768 - 242626
Alignment:
Q  258 tttagggcccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagt 357  Q
    |||||||||||||||||||  ||| | ||  |||||||  ||||  | |||||||||||||||   ||||||||| |||  |||||||  ||||| || |    
T  242768 tttagggcccgtttggattagcttattttatagcttatataaaatagtttatgcaaataaataagtttttatgtattatatataagttt-tcaagctatt 242670  T
Q  358 ttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||| |||||||| |||||||||||| | ||||||||| ||||    
T  242669 ttatggaaaaacaggttatgaagatacgattttcgttagcgaga 242626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 397
Target Start/End: Complemental strand, 109073 - 108984
Alignment:
Q  306 ttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagt 397  Q
    |||||||||||||||  | |||||||| || ||||||| | |||||||| ||||||||||||  | ||||||||||||||| ||||||||||    
T  109073 ttatgcaaataaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaa--aacttatgaagatacaattttcgttagt 108984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 279073 - 278978
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    |||||||||||| ||| | ||||||||| |||| |||||||  | ||||||||||||||||||||   |||| ||||||||||||| ||||||||||    
T  279073 cttatgcaaatacataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttataaagatacaaattttgttagtgaga 278978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 11382 - 11286
Alignment:
Q  305 cttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtgaga 401  Q
    ||||||||||||||||  ||||||| || ||| ||| || | || |||||| |||||| ||||| | |||||||||||||| ||||| |||||||||    
T  11382 cttatgcaaataaataagcttttatttattatccattagcttgttaaggtaatttatggaaaaataacttatgaagatacatatttcattagtgaga 11286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 397
Target Start/End: Original strand, 1267 - 1390
Alignment:
Q  274 attgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagct 373  Q
    |||||||| | || ||||||||||||||   ||||||||||| ||||    || || || |||| ||||||| || |||||||||||||||||||||  |    
T  1267 attgacttattttagagcttatgcaaaacaacttatgcaaatgaataaggattaatatattatttataagtttgttaaggtagtttatgaaaaaacaagt 1366  T
Q  374 tatgaagatacaaatttcgttagt 397  Q
    ||| || |||||| ||||||||||    
T  1367 tataaatatacaattttcgttagt 1390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 398
Target Start/End: Original strand, 4076 - 4161
Alignment:
Q  312 aaataaatagacttttatgtactattcataagttggtcaaggtagtttatgaaaaaacagcttatgaagatacaaatttcgttagtg 398  Q
    |||||||||  |||| ||||| |||| ||||| | || ||| ||||||||||||||| |||||||| | |||||| |||||||||||    
T  4076 aaataaataagctttaatgtattatttataagcttgtaaagatagtttatgaaaaaatagcttatgta-atacaattttcgttagtg 4161  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 331
Target Start/End: Original strand, 48536 - 48601
Alignment:
Q  266 ccgtttggattgacttctctttgagcttatgcaaaaatgcttatgcaaataaatagacttttatgt 331  Q
    |||||| ||||||||| | ||| ||||||| |||||  |||||||||||||||||  |||||||||    
T  48536 ccgttttgattgacttattttttagcttatacaaaatagcttatgcaaataaataagcttttatgt 48601  T

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