View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10792_11 (Length: 305)
Name: NF10792_11
Description: NF10792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10792_11 |
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Alignment Details
Target: chr4 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 29 - 295
Target Start/End: Original strand, 28168623 - 28168889
Alignment:
| Q |
29 |
ttacatggtgtattcaactttcgtttcctagcttcttcaaacttcttaaattcatccatcatgtctcctatcttgtcgacaaccactcttatcttctcgt |
128 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28168623 |
ttacatggtgtattcaactttcttttcctagcttcttcaaacttcttaaattcatccatcatgtctcctatcttgtcgacaaccactcttatcttctcgt |
28168722 |
T |
|
| Q |
129 |
gtatatcctcatctcagtagaagccatacacttatgaagagttgttttattctctttctttattaattctttcaatatcgtttgatgattcctaatgttt |
228 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
28168723 |
gtatatcctcatctcagtagaagccatacatttatgaagagttgttttattctctttctttattaactctttcaatatcgtttgatgattcctaatgttt |
28168822 |
T |
|
| Q |
229 |
cccaaaatatacgagttcaattctcttgtatatctttccaatttcatcaacgtttcatgcacctttg |
295 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
28168823 |
cccaaaatatacgagttcaattctcttgtatatcttttcaatttcatcaacgtttcatgcacctttg |
28168889 |
T |
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