View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10792_12 (Length: 303)

Name: NF10792_12
Description: NF10792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10792_12
NF10792_12
[»] chr3 (17 HSPs)
chr3 (1-240)||(54101836-54102080)
chr3 (238-290)||(4222160-4222212)
chr3 (239-290)||(14339630-14339681)
chr3 (250-291)||(8501577-8501618)
chr3 (238-290)||(30311325-30311377)
chr3 (238-290)||(47454622-47454674)
chr3 (239-290)||(27923048-27923099)
chr3 (239-290)||(29563920-29563971)
chr3 (239-290)||(36720401-36720452)
chr3 (238-289)||(46518647-46518698)
chr3 (239-289)||(17108904-17108954)
chr3 (239-289)||(44069778-44069828)
chr3 (257-290)||(36010780-36010813)
chr3 (258-291)||(49452912-49452945)
chr3 (238-291)||(53412964-53413017)
chr3 (238-290)||(8170691-8170743)
chr3 (238-290)||(37051299-37051351)
[»] chr5 (7 HSPs)
chr5 (238-290)||(43442215-43442267)
chr5 (239-289)||(29692392-29692442)
chr5 (238-291)||(30883202-30883255)
chr5 (238-290)||(12877712-12877764)
chr5 (258-290)||(14285200-14285232)
chr5 (238-290)||(21549142-21549194)
chr5 (238-290)||(25627076-25627128)
[»] chr8 (16 HSPs)
chr8 (238-291)||(30483888-30483941)
chr8 (239-291)||(23361653-23361705)
chr8 (243-290)||(36205219-36205266)
chr8 (238-290)||(33727878-33727930)
chr8 (239-290)||(28783080-28783131)
chr8 (239-290)||(35641906-35641957)
chr8 (240-286)||(4435996-4436042)
chr8 (238-284)||(7286226-7286272)
chr8 (238-287)||(2203511-2203560)
chr8 (238-291)||(6536539-6536592)
chr8 (238-290)||(3624599-3624651)
chr8 (258-290)||(11819815-11819847)
chr8 (238-290)||(16852359-16852411)
chr8 (238-290)||(19703492-19703544)
chr8 (258-290)||(27750769-27750801)
chr8 (238-290)||(35690069-35690121)
[»] scaffold0194 (1 HSPs)
scaffold0194 (239-290)||(13051-13102)
[»] chr4 (15 HSPs)
chr4 (240-290)||(41346968-41347018)
chr4 (238-290)||(38869787-38869839)
chr4 (246-292)||(51969044-51969090)
chr4 (258-291)||(43728434-43728467)
chr4 (241-286)||(53496899-53496944)
chr4 (238-290)||(7292803-7292855)
chr4 (238-290)||(12798703-12798755)
chr4 (238-290)||(30938224-30938276)
chr4 (238-290)||(37109356-37109408)
chr4 (258-290)||(2185037-2185069)
chr4 (238-290)||(13015446-13015498)
chr4 (238-290)||(15729502-15729553)
chr4 (258-290)||(23377995-23378027)
chr4 (238-286)||(31759667-31759715)
chr4 (258-290)||(49576899-49576931)
[»] chr1 (22 HSPs)
chr1 (239-289)||(47720850-47720900)
chr1 (239-289)||(47727842-47727892)
chr1 (238-291)||(9165199-9165252)
chr1 (238-290)||(2799881-2799933)
chr1 (238-290)||(8177187-8177239)
chr1 (242-290)||(15786325-15786373)
chr1 (238-290)||(33700778-33700830)
chr1 (238-290)||(51703798-51703850)
chr1 (239-291)||(52116785-52116837)
chr1 (239-286)||(41508851-41508898)
chr1 (240-290)||(16893415-16893465)
chr1 (240-290)||(51814515-51814565)
chr1 (258-291)||(10150873-10150906)
chr1 (237-290)||(30420328-30420381)
chr1 (250-290)||(521249-521289)
chr1 (258-290)||(3265963-3265995)
chr1 (258-290)||(6122833-6122865)
chr1 (238-290)||(6650614-6650666)
chr1 (258-290)||(38947477-38947509)
chr1 (239-291)||(40257419-40257471)
chr1 (238-278)||(44046165-44046205)
chr1 (238-290)||(52336779-52336831)
[»] chr2 (12 HSPs)
chr2 (238-290)||(29503290-29503342)
chr2 (238-289)||(16918584-16918635)
chr2 (240-290)||(23465926-23465976)
chr2 (254-290)||(6859317-6859353)
chr2 (238-290)||(12801308-12801360)
chr2 (238-290)||(17737629-17737681)
chr2 (238-290)||(42327400-42327452)
chr2 (257-291)||(33839264-33839298)
chr2 (238-291)||(23230609-23230662)
chr2 (238-290)||(13803514-13803566)
chr2 (239-291)||(18259750-18259802)
chr2 (258-290)||(21195681-21195713)
[»] scaffold0291 (1 HSPs)
scaffold0291 (239-290)||(2475-2526)
[»] chr7 (13 HSPs)
chr7 (238-289)||(18363715-18363766)
chr7 (258-290)||(9183196-9183228)
chr7 (238-290)||(26459415-26459467)
chr7 (240-287)||(21854569-21854616)
chr7 (238-285)||(25021345-25021392)
chr7 (239-290)||(43590927-43590978)
chr7 (240-286)||(20952158-20952204)
chr7 (240-290)||(25590632-25590682)
chr7 (237-290)||(7721387-7721440)
chr7 (238-290)||(17041017-17041069)
chr7 (258-290)||(22760902-22760934)
chr7 (238-290)||(41519269-41519321)
chr7 (238-290)||(43215203-43215255)
[»] chr6 (10 HSPs)
chr6 (239-290)||(13227163-13227214)
chr6 (238-290)||(24555738-24555790)
chr6 (238-286)||(28363956-28364004)
chr6 (238-281)||(34293830-34293873)
chr6 (238-291)||(3779358-3779411)
chr6 (250-291)||(15951306-15951347)
chr6 (250-282)||(8268669-8268701)
chr6 (258-290)||(20213080-20213112)
chr6 (258-290)||(22107103-22107135)
chr6 (258-290)||(23910116-23910148)
[»] scaffold0126 (1 HSPs)
scaffold0126 (238-290)||(25352-25404)
[»] scaffold0122 (1 HSPs)
scaffold0122 (238-290)||(6924-6976)
[»] scaffold1367 (1 HSPs)
scaffold1367 (239-290)||(845-896)
[»] scaffold0299 (1 HSPs)
scaffold0299 (239-290)||(11548-11599)
[»] scaffold0118 (1 HSPs)
scaffold0118 (238-291)||(41637-41690)
[»] scaffold0002 (1 HSPs)
scaffold0002 (238-291)||(94975-95028)
[»] scaffold0178 (1 HSPs)
scaffold0178 (238-290)||(6639-6691)
[»] scaffold0021 (1 HSPs)
scaffold0021 (240-276)||(157006-157042)


Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 54102080 - 54101836
Alignment:
Q  1 aaaactcatatcaaagggtattgagcaatctcattactcaatgacgactcgtttgcttaagcagcgataagtattgtgaagttagtttgttagtaatcca 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54102080 aaaactcatatcaaagggtattgagcaatctccttactcaatgacgactcgtttgcttaagcagcgataagtattgtgaagttagtttgttagtaatcca 54101981  T
Q  101 aagtgtattacaaattaagtttagttggttagattgtgaatgc-----nnnnnnnnnntcgaacaagccaaaatattgtgaatgcaaaattgatgtgtat 195  Q
    |||||| ||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||||||||||||||||||||||||    
T  54101980 aagtgtgttacaaattaagtttagttggttagattgtgaatgcaaaaaaaaaaaaaaatcgaacaagccaaaatattgtgaatgcaaaattgatgtgtat 54101881  T
Q  196 aaatggtattgttgctatttgtaattcaataatcaatttttaagt 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  54101880 aaatggtattgttgctatttgtaattcaataatcaatttttaagt 54101836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 4222160 - 4222212
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| ||| |||||||||||||||||||||||||| ||||||    
T  4222160 agtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttc 4222212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 14339630 - 14339681
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||||| ||| ||| ||||||||||||||||||||| |||||||||||    
T  14339630 gtggtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttc 14339681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 8501618 - 8501577
Alignment:
Q  250 ttgagatatgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  8501618 ttgagatctgggagtgtgctcctcctcaaagtttcaggttca 8501577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 30311325 - 30311377
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||| || ||| ||| ||||||||||||||||||||| |||||||||||    
T  30311325 agtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttc 30311377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 47454674 - 47454622
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||||||| | ||||||||||||||||| | |||||||||||    
T  47454674 agtggtattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttc 47454622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 27923099 - 27923048
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||||| ||| || |||| |||||||||||||||| ||||||||||||    
T  27923099 gtggtattggcttgggacatggaagtgtgctcctcctcatagtctcaggttc 27923048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 29563920 - 29563971
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||||| ||||||| ||| |||||||| |||||| |||||||||||||    
T  29563920 gtggtattggcttgagatctggaagtgtgcttctcctcgaagtctcaggttc 29563971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 36720401 - 36720452
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||||| ||| ||||||||||||||||||||||| | || ||||||||    
T  36720401 gtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttc 36720452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 289
Target Start/End: Original strand, 46518647 - 46518698
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggtt 289  Q
    ||||||||||| ||| ||| ||||||||||||||||||||| || |||||||    
T  46518647 agtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtt 46518698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 289
Target Start/End: Complemental strand, 17108954 - 17108904
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggtt 289  Q
    |||||||||  | ||||| ||||||||||||||||||||| ||||||||||    
T  17108954 gtggtattgactggagatgtgggagtgtgctcctcctcaaggtctcaggtt 17108904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 44069778 - 44069828
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggtt 289  Q
    ||||| |||| ||||||| | ||||||||||||||||||| ||||||||||    
T  44069778 gtggtgttggcttgagatcttggagtgtgctcctcctcaaggtctcaggtt 44069828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 290
Target Start/End: Original strand, 36010780 - 36010813
Alignment:
Q  257 atgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||||||||||||| ||||    
T  36010780 atgggagtgtgctcctcctcaaagtctcaagttc 36010813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 291
Target Start/End: Original strand, 49452912 - 49452945
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    ||||||||||||||||||||| ||||||||||||    
T  49452912 tgggagtgtgctcctcctcaaggtctcaggttca 49452945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 53412964 - 53413017
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    ||||||||||| |||  |  ||||||||||||||||||||| ||||||||||||    
T  53412964 agtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttca 53413017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 8170691 - 8170743
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| |||| |  ||||||||||||||| ||||| |||||||||||    
T  8170691 agtggtattggcttgaaacttgggagtgtgctcctactcaaggtctcaggttc 8170743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 37051351 - 37051299
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||| ||||| |||| ||| |||||||||| ||||||| ||||||||||||||    
T  37051351 agtgatattgatttgggatctgggagtgtgttcctccttaaagtctcaggttc 37051299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 43442215 - 43442267
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  43442215 agtggtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttc 43442267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 289
Target Start/End: Complemental strand, 29692442 - 29692392
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggtt 289  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  29692442 gtggtattggattgggatctgggagtgtgctcctcctcaaagtctcaggtt 29692392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 30883255 - 30883202
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    ||||||||||| ||| ||  ||||||||||||||||||||| |||||| |||||    
T  30883255 agtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttca 30883202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 12877712 - 12877764
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||| ||||||||| ||| |||||||||| | |||||||| |||||||||||    
T  12877712 agtggcattggtttgggatttgggagtgtgtttctcctcaatgtctcaggttc 12877764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 14285200 - 14285232
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||||| |||||||||||    
T  14285200 tgggagtgtgctcctcctcaaggtctcaggttc 14285232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 21549194 - 21549142
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| ||  |||||||||||||||||| ||||||||| ||||    
T  21549194 agtggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttc 21549142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 25627076 - 25627128
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| |||  |  ||||||||||||||||||||| |||||||||||    
T  25627076 agtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttc 25627128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 30483941 - 30483888
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||||||||    
T  30483941 agtggtattggcttgggatatgggagtgtgctcctcctcagagtctcaggttca 30483888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 23361705 - 23361653
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    |||||||||  ||| ||||||||||||||||||||||||| ||||||||||||    
T  23361705 gtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttca 23361653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 36205219 - 36205266
Alignment:
Q  243 tattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  36205219 tattggtttgagatctgggagtgtgctcctcctcaaggtctcatgttc 36205266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 33727930 - 33727878
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||| |||||||||  ||| ||||||||||||||||| |||||||||||    
T  33727930 agtggtataggtttgagacttggaagtgtgctcctcctcaaggtctcaggttc 33727878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 28783080 - 28783131
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||||| ||||||  ||||||||||||||||||||| |||||| ||||    
T  28783080 gtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttc 28783131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 35641957 - 35641906
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||| || ||||||| ||||||||||||||||||| | |||||||||||    
T  35641957 gtggtatcggcttgagatttgggagtgtgctcctcctcgatgtctcaggttc 35641906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 286
Target Start/End: Original strand, 4435996 - 4436042
Alignment:
Q  240 tggtattggtttgagatatgggagtgtgctcctcctcaaagtctcag 286  Q
    ||||||||| |||||| ||||||| |||||||||||||| |||||||    
T  4435996 tggtattggcttgagacatgggagagtgctcctcctcaaggtctcag 4436042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 7286226 - 7286272
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctc 284  Q
    ||||||||||||||| ||| |||||||||||||||| | ||||||||    
T  7286226 agtggtattggtttgggatctgggagtgtgctcctctttaaagtctc 7286272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 2203511 - 2203560
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcagg 287  Q
    ||||||||||| ||| ||  ||||||||||||||||||||| ||||||||    
T  2203511 agtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagg 2203560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 6536539 - 6536592
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    ||||||||||| ||| ||  | ||||||||||||||||||| ||||||||||||    
T  6536539 agtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttca 6536592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 3624599 - 3624651
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| ||  |||||||||||||||| |||| |||||||||||    
T  3624599 agtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttc 3624651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 11819815 - 11819847
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||||| |||||||||||    
T  11819815 tgggagtgtgctcctcctcaaggtctcaggttc 11819847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 16852359 - 16852411
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| ||  ||||||||||||||||||| | |||||||||||    
T  16852359 agtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttc 16852411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 19703544 - 19703492
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| ||  || |||||||||||||||||| |||||||||||    
T  19703544 agtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttc 19703492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 27750769 - 27750801
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||||| |||||||||||    
T  27750769 tgggagtgtgctcctcctcaaggtctcaggttc 27750801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 35690121 - 35690069
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| ||| |||| || ||||||||||||| |||||||||||    
T  35690121 agtggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttc 35690069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 13102 - 13051
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||||||||    
T  13102 gtggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttc 13051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 41347018 - 41346968
Alignment:
Q  240 tggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  41347018 tggtattggtttgagatctgggagtatgctcctcctcgaagtctcaggttc 41346968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 38869787 - 38869839
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| ||| ||||||||||||||||||||| |||||||||||    
T  38869787 agtggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttc 38869839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 51969044 - 51969090
Alignment:
Q  246 tggtttgagatatgggagtgtgctcctcctcaaagtctcaggttcat 292  Q
    ||||||||||| ||||||||||||||||||||| || ||||||||||    
T  51969044 tggtttgagatttgggagtgtgctcctcctcaaggtttcaggttcat 51969090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 291
Target Start/End: Original strand, 43728434 - 43728467
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    ||||||||||||||||||||||||||||||||||    
T  43728434 tgggagtgtgctcctcctcaaagtctcaggttca 43728467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 53496899 - 53496944
Alignment:
Q  241 ggtattggtttgagatatgggagtgtgctcctcctcaaagtctcag 286  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||    
T  53496899 ggtattggtttgggacctgggagtgtgctcctcctcaaagtctcag 53496944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 7292855 - 7292803
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| |||  |  |||||||||||||||||||||||||||||||||    
T  7292855 agtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttc 7292803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 12798703 - 12798755
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||| |||||||||||| |||||| | || ||||||||    
T  12798703 agtggtattggtttgagatctgggagtgtgctgctcctcgaggtttcaggttc 12798755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 30938276 - 30938224
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||| ||| | ||||||||||||||||| | |||||||||||    
T  30938276 agtggtattggtttgggatcttggagtgtgctcctcctcgaggtctcaggttc 30938224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 37109408 - 37109356
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| ||  ||||||||||||||||||||| |||||||||||    
T  37109408 agtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttc 37109356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 2185069 - 2185037
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||| |||||||||||||||||    
T  2185069 tgggagtgtgctccttctcaaagtctcaggttc 2185037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 13015446 - 13015498
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| ||  ||||||||||||||||||| |||||||| ||||    
T  13015446 agtggtattggcttgggacttgggagtgtgctcctcctcgaagtctcatgttc 13015498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 15729502 - 15729553
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||| || |||||||||||||||| | |||||| ||||    
T  15729502 agtggtattggtttgagat-tgagagtgtgctcctcctcgatgtctcaagttc 15729553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 23377995 - 23378027
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||||| |||||||||||    
T  23377995 tgggagtgtgctcctcctcaaggtctcaggttc 23378027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 31759715 - 31759667
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcag 286  Q
    ||||||||||| ||| ||  ||||||||||||||||||||| |||||||    
T  31759715 agtggtattggcttgggacttgggagtgtgctcctcctcaaggtctcag 31759667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 49576931 - 49576899
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||||| |||||||||||    
T  49576931 tgggagtgtgctcctcctcaaggtctcaggttc 49576899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 47720850 - 47720900
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggtt 289  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  47720850 gtggtattgacttgagatataggagtgtgctcctcctcaaagtctcaggtt 47720900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 47727842 - 47727892
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggtt 289  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  47727842 gtggtattgacttgagatataggagtgtgctcctcctcaaagtctcaggtt 47727892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 9165252 - 9165199
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    ||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||    
T  9165252 agtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttca 9165199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 2799881 - 2799933
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||| || ||||||| ||||||||||||||||||||| |||||||||||    
T  2799881 agtggtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttc 2799933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 8177239 - 8177187
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| ||| ||||||||||||||||||||| || ||||||||    
T  8177239 agtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttc 8177187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 15786373 - 15786325
Alignment:
Q  242 gtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||| ||| ||| ||||||||||||||||||||| |||||||||||    
T  15786373 gtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttc 15786325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 33700830 - 33700778
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| |||  || ||||||||||||||||||||| |||||||||||    
T  33700830 agtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttc 33700778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 51703798 - 51703850
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| |||  || |||||||||||||||||||||||| ||||||||    
T  51703798 agtggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttc 51703850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 52116837 - 52116785
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    |||||||||| ||| ||  ||||||||||||||||||||| ||||||||||||    
T  52116837 gtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttca 52116785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 41508851 - 41508898
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcag 286  Q
    |||||| ||||||| ||| ||||||||||||||||||||| |||||||    
T  41508851 gtggtactggtttgggatctgggagtgtgctcctcctcaaggtctcag 41508898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 16893415 - 16893465
Alignment:
Q  240 tggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||| ||||||| ||||||||| ||||||||| | |||||||||||    
T  16893415 tggtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttc 16893465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 51814515 - 51814565
Alignment:
Q  240 tggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||  ||||||| || |||||||||||||||||| |||||||||||    
T  51814515 tggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttc 51814565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 291
Target Start/End: Complemental strand, 10150906 - 10150873
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    ||||||||| ||||||||||||||||||||||||    
T  10150906 tgggagtgtactcctcctcaaagtctcaggttca 10150873  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 30420328 - 30420381
Alignment:
Q  237 aagtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||| |||| ||| ||||| |||||||||||||||||||  ||||||||||    
T  30420328 aagtggttttggcttgggatataggagtgtgctcctcctcaacatctcaggttc 30420381  T

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Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 521249 - 521289
Alignment:
Q  250 ttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||| |||| ||||||||||||| ||||||||||||||    
T  521249 ttgagatttgggggtgtgctcctccttaaagtctcaggttc 521289  T

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Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 3265963 - 3265995
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||||| |||||||||||    
T  3265963 tgggagtgtgctcctcctcaaggtctcaggttc 3265995  T

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Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 6122833 - 6122865
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||||| |||||||||||    
T  6122833 tgggagtgtgctcctcctcaaggtctcaggttc 6122865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 6650614 - 6650666
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| |||  |||||| ||||||||||||| |||||||||||    
T  6650614 agtggtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttc 6650666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 38947509 - 38947477
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||||| |||||||||||    
T  38947509 tgggagtgtgctcctcctcaaggtctcaggttc 38947477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 40257419 - 40257471
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    |||||||||| ||||||  ||||||||||||||||||| | |||||| |||||    
T  40257419 gtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttca 40257471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 44046205 - 44046165
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaa 278  Q
    ||||||||||| ||| ||| |||||||||||||||||||||    
T  44046205 agtggtattggcttgggatctgggagtgtgctcctcctcaa 44046165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 52336831 - 52336779
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| ||| |||||||||||||||||| ||  ||||||||||    
T  52336831 agtggtattggcttgggatctgggagtgtgctcctccttaagatctcaggttc 52336779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000007; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 29503290 - 29503342
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||| ||  ||||||||||||||||||||| |||||||||||    
T  29503290 agtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttc 29503342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 289
Target Start/End: Complemental strand, 16918635 - 16918584
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggtt 289  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |||| |||||    
T  16918635 agtggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggtt 16918584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 23465976 - 23465926
Alignment:
Q  240 tggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||  ||| ||||||| |||||||||||||||||||||||||    
T  23465976 tggtattggtttaggatttgggagtatgctcctcctcaaagtctcaggttc 23465926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 290
Target Start/End: Complemental strand, 6859353 - 6859317
Alignment:
Q  254 gatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||||||||||||||| ||||||||||||||||    
T  6859353 gatatgggagtgtgctcctcttcaaagtctcaggttc 6859317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 12801308 - 12801360
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||| ||||| ||| |||| || |||||||||||||||||||||||||    
T  12801308 agtggtattagtttgggatctgggggtatgctcctcctcaaagtctcaggttc 12801360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 17737681 - 17737629
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||| ||  ||||||||||||||||||||| |||||| ||||    
T  17737681 agtggtattggtttgtgacttgggagtgtgctcctcctcaaggtctcatgttc 17737629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 42327452 - 42327400
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| ||  ||||||||||||||||||||| |||||||||||    
T  42327452 agtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttc 42327400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 291
Target Start/End: Complemental strand, 33839298 - 33839264
Alignment:
Q  257 atgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    |||||||||||||||||||||| ||||||||||||    
T  33839298 atgggagtgtgctcctcctcaaggtctcaggttca 33839264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 23230662 - 23230609
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    |||||||||| |||| ||  ||||||||||||||||||||||||  ||||||||    
T  23230662 agtggtattgatttgggaactgggagtgtgctcctcctcaaagttccaggttca 23230609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 13803514 - 13803566
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||| |||||| ||||||  | ||||||||||||||||||| |||||||||||    
T  13803514 agtgatattggcttgagacttaggagtgtgctcctcctcaaggtctcaggttc 13803566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 18259750 - 18259802
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    |||||||||| ||||||| || |||||||||||||||  | ||||||||||||    
T  18259750 gtggtattggcttgagatttgagagtgtgctcctcctataggtctcaggttca 18259802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 21195713 - 21195681
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||||| |||||||||||    
T  21195713 tgggagtgtgctcctcctcaaggtctcaggttc 21195681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 2526 - 2475
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||    
T  2526 gtggtattggttttggatctgggagtgtgctcctcctcaaggtctcaggttc 2475  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 289
Target Start/End: Original strand, 18363715 - 18363766
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggtt 289  Q
    |||||||| || ||||||| ||||||||||||||||||||| ||||||||||    
T  18363715 agtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtt 18363766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 9183228 - 9183196
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||||||||||||||||||||||||||||    
T  9183228 tgggagtgtgctcctcctcaaagtctcaggttc 9183196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 26459467 - 26459415
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| ||  ||||||||||||||||||||| |||||||||||    
T  26459467 agtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttc 26459415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 287
Target Start/End: Original strand, 21854569 - 21854616
Alignment:
Q  240 tggtattggtttgagatatgggagtgtgctcctcctcaaagtctcagg 287  Q
    ||||||||| | | ||| ||||||||||||||||||||||||||||||    
T  21854569 tggtattggctagggatctgggagtgtgctcctcctcaaagtctcagg 21854616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 25021392 - 25021345
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctca 285  Q
    ||||||||||| ||| ||  ||||||||||||||||||||||||||||    
T  25021392 agtggtattggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 43590927 - 43590978
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||||| ||| ||  ||||||||||||||||||||| |||||||||||    
T  43590927 gtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttc 43590978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 20952204 - 20952158
Alignment:
Q  240 tggtattggtttgagatatgggagtgtgctcctcctcaaagtctcag 286  Q
    ||||||||||||| ||  |||||||||||||||||||||| ||||||    
T  20952204 tggtattggtttgggacctgggagtgtgctcctcctcaaaatctcag 20952158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 25590632 - 25590682
Alignment:
Q  240 tggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||| ||||||| ||||||||||||||||||| | ||||| |||||    
T  25590632 tggtattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttc 25590682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 7721387 - 7721440
Alignment:
Q  237 aagtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||||||||||| ||  ||||||||| ||||||||||| |||||| ||||    
T  7721387 aagtggtattggtttgggacctgggagtgtactcctcctcaaggtctcatgttc 7721440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 17041069 - 17041017
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||| ||||| ||| ||| ||| ||||||||||||||||| |||||||||||    
T  17041069 agtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcaggttc 17041017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 22760902 - 22760934
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||||| |||||||||||    
T  22760902 tgggagtgtgctcctcctcaaggtctcaggttc 22760934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 41519321 - 41519269
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||  ||| ||| | ||||||||||||||||||| |||||||||||    
T  41519321 agtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttc 41519269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 43215203 - 43215255
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| ||  | ||||||||||||||||||| |||||||||||    
T  43215203 agtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttc 43215255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 13227214 - 13227163
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||| ||||    
T  13227214 gtggtattggtatgagatctgggagtgtgctcctcctcgaagtctcaagttc 13227163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 24555738 - 24555790
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||| | ||||| |||||||||||||  ||||||||||    
T  24555738 agtggtattggtttgagatctcggagtatgctcctcctcaagatctcaggttc 24555790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 28363956 - 28364004
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcag 286  Q
    ||||||||||||||| ||| || |||||||||||||||||| |||||||    
T  28363956 agtggtattggtttgggatctgcgagtgtgctcctcctcaaggtctcag 28364004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 281
Target Start/End: Complemental strand, 34293873 - 34293830
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagt 281  Q
    |||||||||||||||  || ||||||||||||||||||||||||    
T  34293873 agtggtattggtttggaatttgggagtgtgctcctcctcaaagt 34293830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 3779358 - 3779411
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    ||||||||||| ||||||  ||||||||||||||| ||||| ||||||| ||||    
T  3779358 agtggtattggcttgagacttgggagtgtgctccttctcaaggtctcagattca 3779411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 15951347 - 15951306
Alignment:
Q  250 ttgagatatgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    ||||||| ||||||||||||||||||||| |||||| |||||    
T  15951347 ttgagatttgggagtgtgctcctcctcaaggtctcatgttca 15951306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 8268669 - 8268701
Alignment:
Q  250 ttgagatatgggagtgtgctcctcctcaaagtc 282  Q
    ||||||| |||||||||||||||||||||||||    
T  8268669 ttgagatttgggagtgtgctcctcctcaaagtc 8268701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 20213080 - 20213112
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||||| |||||||||||    
T  20213080 tgggagtgtgctcctcctcaatgtctcaggttc 20213112  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 22107103 - 22107135
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||||| |||||||||||    
T  22107103 tgggagtgtgctcctcctcaatgtctcaggttc 22107135  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 23910148 - 23910116
Alignment:
Q  258 tgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||||||||| |||||||||||    
T  23910148 tgggagtgtgctcctcctcaaggtctcaggttc 23910116  T

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Target: scaffold0126 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 25404 - 25352
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||||||  ||||||||||||||| ||||| |||||||||||    
T  25404 agtggtattggcttgagacttgggagtgtgctccttctcaaggtctcaggttc 25352  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 6976 - 6924
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||| ||| ||   ||||||||||||||||||||||||||||||||    
T  6976 agtggtattggcttgggactggggagtgtgctcctcctcaaagtctcaggttc 6924  T

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Target: scaffold1367 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 896 - 845
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||||| ||| ||| ||||| ||||||||||||| |||||||||||||    
T  896 gtggtattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttc 845  T

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Target: scaffold0299 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 11548 - 11599
Alignment:
Q  239 gtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    |||||||||| ||| ||| ||||||||||||||||||| | |||||||||||    
T  11548 gtggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttc 11599  T

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Target: scaffold0118 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 41690 - 41637
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    ||||||||||| ||||||| || |||| ||||||||||| | ||||||||||||    
T  41690 agtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttca 41637  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 95028 - 94975
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttca 291  Q
    ||||||||||| |||  |  ||||||||||||||||||||| ||||||||||||    
T  95028 agtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttca 94975  T

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Target: scaffold0178 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 6691 - 6639
Alignment:
Q  238 agtggtattggtttgagatatgggagtgtgctcctcctcaaagtctcaggttc 290  Q
    ||||||||||||||  ||  |||||||||| |||||||||||||||| |||||    
T  6691 agtggtattggtttaggacttgggagtgtgttcctcctcaaagtctcgggttc 6639  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 157042 - 157006
Alignment:
Q  240 tggtattggtttgagatatgggagtgtgctcctcctc 276  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  157042 tggtattggcttgagatctgggagtgtgctcctcctc 157006  T

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