View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10792_low_1 (Length: 302)
Name: NF10792_low_1
Description: NF10792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10792_low_1 |
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Alignment Details
Target: chr4 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 17 - 295
Target Start/End: Original strand, 37926837 - 37927115
Alignment:
| Q |
17 |
aatttgagcagtcaaatatcttcattttgataaatactataattatcatcttcttcaattcttgtctcatccaacaaagtgtcattgtgtacactttttc |
116 |
Q |
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| T |
37926837 |
aatttgagcagtcaaatatcttcattttgataaatactataattatcctcttcttcaattcttgtctcatccaacaaagtgtcattgtgtacactttttc |
37926936 |
T |
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| Q |
117 |
tcaaatctttgactccacttgtctaccctttatgatgttgatgtaaaatcttctcctgagccaaattcataaattaaactacttctttatctttcccttt |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37926937 |
tcaaatctttgactccacttgtctaccctttatgatgttgatgtaaaatcttctcatgagccaaattcataaattaaactacttctttatctttcccttt |
37927036 |
T |
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| Q |
217 |
atatttgttgtctgtaactttcacaaagtctttcgtcggatcgtgcataggtttctttttacactttcctcctttgctt |
295 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
37927037 |
atatttgttgtctgtaactttcacaaagtctttcttcggatcgtgcataggtttctttttacactttcctccttggctt |
37927115 |
T |
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