View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10794_4 (Length: 551)
Name: NF10794_4
Description: NF10794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10794_4 |
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Alignment Details
Target: chr7 (Bit Score: 470; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 26 - 545
Target Start/End: Original strand, 40254722 - 40255241
Alignment:
| Q |
26 |
gagatcaaacacaagcttctccgtacaaggcttgaactaatatcgacaaaaatggaatccagtgctgagataaagaaatatgaagaaactgttgatcatt |
125 |
Q |
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| T |
40254722 |
gagatcaaacacaagcttctccgtacaaggcttgaactaatatcgacaaaaatggaatccagtgctgagataaagaaatatgaagaaactgttgatcatt |
40254821 |
T |
|
| Q |
126 |
tatacaagctattacagagagcttgccaagaaagagatgaagcaagagatcaacttcaattgttaataagaaattttcagccatctacacaagctaagac |
225 |
Q |
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| T |
40254822 |
tatacaagctattacagagagcttgccaagaaagagatgaagcaagagatcaacttcaattgttaataagaaattttcagccatctacacaagctaagac |
40254921 |
T |
|
| Q |
226 |
atatagtactattccacaacttgatcatccaaagcaacaactttcatgtgatttatctttgtctagcctccaatcaaataatgagaagaaaatttcctca |
325 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40254922 |
atatagtactattccacaacttgatcatccaaagcaacaactttcatgtgatttatctttgtctagcctccaatcaaataatgagaagaaaatttcctca |
40255021 |
T |
|
| Q |
326 |
atgaattcatctaacacaagaatagttgaatcatgcaacatggccttnnnnnnnnnnnnnnttcatcaaaacaaatttggaatagtaaatgcaaatattg |
425 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
40255022 |
atgaattcatctaacacaagaatagttgaatcatgcaacatggccttaaaaaagcaaaaaattcatcaaaacaaatttggaatagtaaatgcaaatattg |
40255121 |
T |
|
| Q |
426 |
atgatgttgcttcctctagcctttcacttcatagcatcaacaaggagaattatttatctaacaatatttatgataaggaaagtgttgttccaacttcttt |
525 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40255122 |
atgatgttgcttcctctagcctttcacttcatagcatcaacaaggagaattatttatctaacaatatttatgataaggaaagtgttgttccaacttcttt |
40255221 |
T |
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| Q |
526 |
gagtttagcatattcttcga |
545 |
Q |
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||||||||||| | |||||| |
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| T |
40255222 |
gagtttagcatttccttcga |
40255241 |
T |
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