View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10794_5 (Length: 453)
Name: NF10794_5
Description: NF10794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10794_5 |
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Alignment Details
Target: chr8 (Bit Score: 380; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 25 - 428
Target Start/End: Original strand, 3195821 - 3196223
Alignment:
| Q |
25 |
caattatatcatgataatggacaaaagttaattagatatagaaccataactgaaaatatcgtgcacaacctcttattgcttttaccaaacaattgctacc |
124 |
Q |
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| T |
3195821 |
caattatatcatgataatggacaaaagttaattagatatagaaccataactgaaaatatcgtgcacaaccttttattgcttttaccaaacaattgctacc |
3195920 |
T |
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| Q |
125 |
tattgaaaaaacattgacaatatctaattcacttattattctgtctaagaaaattcttccttggtagccatgctcccttctaattatctatactccttta |
224 |
Q |
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| T |
3195921 |
tattgaaaaaacattgacaatatctaattcacttattct-ctgtctaagaaaattcttccttggtagccatgctcccttctaattatctatactccttta |
3196019 |
T |
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| Q |
225 |
gcaatagtttccttattttgtttttaaaatgtttcaaattattgaaattttaacttgttatcattaatagcaaatttcttccatgatccttttgcaattt |
324 |
Q |
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| T |
3196020 |
gcaatagtttccttattttgtttttaaaatgtttcaaattgttgaaattttaacttgttatcattaatagcaaatttcttccatgatccttttgcaattt |
3196119 |
T |
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| Q |
325 |
cttcaacattttaagtgcaacctgccccaaatcaattgtccaatactatagcaaatagatattgtgttactcttgacattttgaatgcagaatatcatta |
424 |
Q |
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| T |
3196120 |
cttcaacattttaagtgcaacctgccccaaatcaattgtccaatactatagcaaatagatattgtgttactcttgacattttgaatgtagaatatcatta |
3196219 |
T |
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| Q |
425 |
tgat |
428 |
Q |
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| T |
3196220 |
tgat |
3196223 |
T |
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