View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10796_4 (Length: 309)
Name: NF10796_4
Description: NF10796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10796_4 |
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Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 28316433 - 28316203
Alignment:
| Q |
8 |
tgagatgaagggtgttgttaggtttgagacttcaccattactctccaagcgtgaagcaagttggaatggaagtgtttcaaatgttgatacttatgaaagt |
107 |
Q |
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| T |
28316433 |
tgagatgaagggtgttgttaggtttgagacttcaccattactctccaagcgtgaagcaagttggaatggaagtgtttcaaatgttgatacttatgaaagt |
28316334 |
T |
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| Q |
108 |
gctgctcctacatgcaaatgtgggaaaaagtgtatcttatacatctcaaaaacatctaagaatcctaacacacacttctataggtgtccttattttaagg |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28316333 |
gctgctcctacatgcaaatgtgggaaaaagtgtatcttatacatctcaaaaacatctaagaatcctaacacacacttctataggtgtccttattttaagg |
28316234 |
T |
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| Q |
208 |
taaatcatcacttgttttgaacactctccac |
238 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
28316233 |
taaatcatcacttgttttgaacactctccac |
28316203 |
T |
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