View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10798_low_16 (Length: 314)

Name: NF10798_low_16
Description: NF10798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10798_low_16
NF10798_low_16
[»] chr6 (26 HSPs)
chr6 (16-309)||(552909-553202)
chr6 (16-83)||(32316816-32316883)
chr6 (16-83)||(15974724-15974791)
chr6 (16-78)||(18737460-18737522)
chr6 (17-83)||(34047504-34047570)
chr6 (16-83)||(33430250-33430317)
chr6 (16-83)||(16199566-16199633)
chr6 (16-83)||(26595465-26595532)
chr6 (21-84)||(31077915-31077978)
chr6 (16-84)||(14818048-14818116)
chr6 (16-84)||(22079450-22079518)
chr6 (16-85)||(5694037-5694106)
chr6 (27-83)||(1156847-1156903)
chr6 (16-83)||(13689882-13689949)
chr6 (16-83)||(277107-277174)
chr6 (16-82)||(11612304-11612370)
chr6 (16-83)||(4820483-4820550)
chr6 (16-83)||(30457621-30457688)
chr6 (16-72)||(3853206-3853262)
chr6 (52-84)||(5080466-5080498)
chr6 (28-84)||(17551266-17551322)
chr6 (48-83)||(8098497-8098532)
chr6 (16-83)||(24900890-24900957)
chr6 (17-79)||(10826620-10826682)
chr6 (17-78)||(33657006-33657067)
chr6 (16-80)||(30423443-30423507)
[»] chr5 (36 HSPs)
chr5 (16-85)||(28306018-28306087)
chr5 (16-93)||(33037636-33037713)
chr5 (16-84)||(7287076-7287144)
chr5 (16-83)||(18258681-18258748)
chr5 (16-83)||(26791132-26791199)
chr5 (16-83)||(1671658-1671725)
chr5 (16-84)||(41321371-41321439)
chr5 (16-83)||(5168299-5168366)
chr5 (16-83)||(14051203-14051270)
chr5 (16-82)||(1764340-1764406)
chr5 (21-83)||(35634723-35634785)
chr5 (16-85)||(15479585-15479654)
chr5 (22-83)||(36739070-36739131)
chr5 (16-75)||(7076464-7076523)
chr5 (16-83)||(7552855-7552922)
chr5 (16-83)||(17626102-17626169)
chr5 (21-83)||(1274479-1274540)
chr5 (16-82)||(13168638-13168704)
chr5 (22-84)||(14923195-14923257)
chr5 (16-83)||(3565200-3565267)
chr5 (16-83)||(8687007-8687074)
chr5 (16-83)||(22972233-22972300)
chr5 (16-83)||(28467341-28467408)
chr5 (16-83)||(39591796-39591863)
chr5 (16-83)||(39592188-39592255)
chr5 (16-81)||(39054703-39054768)
chr5 (28-80)||(2972452-2972504)
chr5 (16-82)||(42175035-42175101)
chr5 (16-80)||(13309999-13310063)
chr5 (47-83)||(35646518-35646554)
chr5 (17-83)||(4719768-4719834)
chr5 (17-83)||(21353261-21353327)
chr5 (18-83)||(4088562-4088627)
chr5 (17-78)||(10649553-10649613)
chr5 (16-85)||(21156104-21156173)
chr5 (15-79)||(19952115-19952179)
[»] chr4 (56 HSPs)
chr4 (16-83)||(26732341-26732408)
chr4 (16-86)||(53801644-53801714)
chr4 (16-83)||(51986158-51986225)
chr4 (16-80)||(10250406-10250470)
chr4 (16-83)||(23369220-23369287)
chr4 (16-83)||(29175341-29175408)
chr4 (16-83)||(44539850-44539917)
chr4 (18-83)||(37297166-37297231)
chr4 (16-84)||(43175100-43175168)
chr4 (16-83)||(15175662-15175729)
chr4 (16-79)||(27050978-27051041)
chr4 (26-83)||(27965111-27965168)
chr4 (16-80)||(11068804-11068868)
chr4 (16-80)||(24575742-24575806)
chr4 (16-88)||(26724855-26724927)
chr4 (16-84)||(38376377-38376445)
chr4 (16-84)||(46213086-46213154)
chr4 (16-83)||(26492123-26492190)
chr4 (16-83)||(38382437-38382504)
chr4 (16-83)||(39440600-39440667)
chr4 (16-83)||(39478553-39478620)
chr4 (16-83)||(47181957-47182024)
chr4 (16-83)||(48402085-48402152)
chr4 (16-83)||(2575678-2575745)
chr4 (16-83)||(31641453-31641520)
chr4 (16-83)||(34616677-34616744)
chr4 (16-83)||(56363933-56364000)
chr4 (16-77)||(45083088-45083149)
chr4 (16-83)||(5622574-5622641)
chr4 (16-83)||(36178022-36178089)
chr4 (16-79)||(37997370-37997433)
chr4 (16-75)||(38134469-38134528)
chr4 (44-87)||(53786099-53786142)
chr4 (20-85)||(5233556-5233621)
chr4 (16-80)||(19473847-19473911)
chr4 (16-83)||(39195173-39195240)
chr4 (16-83)||(42853693-42853760)
chr4 (16-86)||(7632346-7632416)
chr4 (47-85)||(46634235-46634273)
chr4 (17-83)||(50831643-50831709)
chr4 (26-86)||(26907967-26908027)
chr4 (16-84)||(39606088-39606156)
chr4 (48-83)||(2268407-2268442)
chr4 (16-83)||(50721632-50721699)
chr4 (17-75)||(3316471-3316529)
chr4 (17-83)||(19232022-19232088)
chr4 (17-83)||(42491191-42491257)
chr4 (48-85)||(42360292-42360329)
chr4 (17-78)||(56271478-56271538)
chr4 (15-79)||(19174666-19174730)
chr4 (16-84)||(24045910-24045978)
chr4 (24-80)||(49449036-49449092)
chr4 (16-82)||(56474656-56474722)
chr4 (44-80)||(25123178-25123214)
chr4 (16-68)||(27354257-27354309)
chr4 (27-83)||(39259080-39259136)
[»] chr7 (32 HSPs)
chr7 (16-84)||(38956505-38956573)
chr7 (17-84)||(41989627-41989694)
chr7 (16-83)||(3937011-3937078)
chr7 (16-83)||(43942748-43942815)
chr7 (16-83)||(44895460-44895527)
chr7 (16-83)||(25192805-25192872)
chr7 (16-83)||(46022155-46022222)
chr7 (16-82)||(32529745-32529811)
chr7 (16-83)||(7701660-7701727)
chr7 (16-83)||(24614204-24614271)
chr7 (16-83)||(40112842-40112909)
chr7 (16-83)||(43025456-43025523)
chr7 (16-86)||(22918054-22918124)
chr7 (18-84)||(40417892-40417958)
chr7 (16-85)||(45851093-45851162)
chr7 (20-83)||(3614334-3614397)
chr7 (16-83)||(35072250-35072317)
chr7 (16-83)||(35098591-35098658)
chr7 (16-88)||(41189424-41189498)
chr7 (17-84)||(43159462-43159529)
chr7 (16-82)||(38944913-38944979)
chr7 (26-84)||(46578022-46578080)
chr7 (17-84)||(35600789-35600856)
chr7 (48-83)||(38073356-38073391)
chr7 (24-81)||(32803813-32803870)
chr7 (21-84)||(13401550-13401613)
chr7 (16-83)||(31445434-31445501)
chr7 (17-80)||(42553015-42553078)
chr7 (16-83)||(48062173-48062240)
chr7 (17-91)||(10700066-10700140)
chr7 (17-83)||(41018781-41018847)
chr7 (16-80)||(35207617-35207679)
[»] chr1 (57 HSPs)
chr1 (16-84)||(26469475-26469543)
chr1 (16-83)||(27464945-27465012)
chr1 (16-83)||(31088297-31088364)
chr1 (16-83)||(45121369-45121436)
chr1 (16-83)||(649885-649952)
chr1 (16-83)||(19055647-19055714)
chr1 (16-83)||(48470755-48470822)
chr1 (16-85)||(3981912-3981981)
chr1 (16-84)||(35369816-35369884)
chr1 (16-84)||(44519038-44519106)
chr1 (16-84)||(50726135-50726203)
chr1 (16-83)||(33100924-33100991)
chr1 (16-85)||(37619660-37619729)
chr1 (18-83)||(45640419-45640484)
chr1 (16-77)||(50932420-50932481)
chr1 (28-84)||(8350086-8350142)
chr1 (16-83)||(21401514-21401581)
chr1 (16-83)||(23645527-23645594)
chr1 (16-77)||(3851274-3851335)
chr1 (16-83)||(2571751-2571819)
chr1 (16-80)||(43775322-43775386)
chr1 (16-83)||(52576189-52576257)
chr1 (16-83)||(37274921-37274988)
chr1 (16-83)||(44914459-44914527)
chr1 (16-83)||(9566848-9566915)
chr1 (16-83)||(18434911-18434978)
chr1 (17-84)||(19947631-19947698)
chr1 (16-79)||(40861154-40861217)
chr1 (16-83)||(46907311-46907378)
chr1 (16-86)||(48103247-48103318)
chr1 (29-80)||(50333337-50333388)
chr1 (17-83)||(30467421-30467487)
chr1 (16-77)||(6809696-6809757)
chr1 (16-85)||(45333827-45333896)
chr1 (16-92)||(31827067-31827143)
chr1 (16-83)||(30735181-30735248)
chr1 (16-83)||(50149062-50149129)
chr1 (17-86)||(51571231-51571300)
chr1 (16-84)||(15469944-15470011)
chr1 (47-83)||(41677224-41677260)
chr1 (22-84)||(37685451-37685513)
chr1 (22-84)||(37700005-37700067)
chr1 (17-83)||(50775044-50775110)
chr1 (16-83)||(51718518-51718581)
chr1 (16-85)||(26207957-26208026)
chr1 (17-77)||(26020970-26021030)
chr1 (18-82)||(30570642-30570706)
chr1 (17-83)||(3672429-3672495)
chr1 (16-82)||(9988068-9988134)
chr1 (17-83)||(47214325-47214390)
chr1 (16-82)||(49065253-49065319)
chr1 (17-83)||(51286256-51286321)
chr1 (26-83)||(2269460-2269517)
chr1 (26-83)||(49647039-49647096)
chr1 (34-79)||(50239056-50239101)
chr1 (52-84)||(6693297-6693329)
chr1 (48-80)||(12657359-12657391)
[»] chr3 (61 HSPs)
chr3 (16-83)||(27541390-27541457)
chr3 (16-83)||(32924169-32924236)
chr3 (22-93)||(36670892-36670963)
chr3 (16-84)||(13735846-13735914)
chr3 (16-84)||(16969453-16969521)
chr3 (16-83)||(42356972-42357039)
chr3 (16-83)||(52939767-52939834)
chr3 (21-85)||(7934095-7934159)
chr3 (16-84)||(19149106-19149174)
chr3 (16-83)||(33939354-33939421)
chr3 (16-83)||(35376969-35377036)
chr3 (16-83)||(38926744-38926811)
chr3 (16-83)||(41309233-41309300)
chr3 (16-83)||(44856069-44856136)
chr3 (16-83)||(46624023-46624090)
chr3 (16-83)||(47472445-47472512)
chr3 (21-82)||(35597283-35597344)
chr3 (16-80)||(42358529-42358593)
chr3 (16-83)||(13348022-13348089)
chr3 (16-83)||(21217628-21217695)
chr3 (16-83)||(26014928-26014995)
chr3 (16-83)||(37056945-37057012)
chr3 (16-83)||(44413283-44413350)
chr3 (16-83)||(52254026-52254093)
chr3 (16-83)||(52326135-52326202)
chr3 (18-80)||(7668079-7668141)
chr3 (16-82)||(23592574-23592640)
chr3 (16-82)||(23600709-23600775)
chr3 (16-84)||(5244345-5244413)
chr3 (15-83)||(31157565-31157633)
chr3 (16-84)||(37503634-37503702)
chr3 (15-83)||(44813251-44813319)
chr3 (22-85)||(288848-288911)
chr3 (16-83)||(5114194-5114261)
chr3 (16-83)||(44383305-44383372)
chr3 (16-83)||(44445410-44445477)
chr3 (16-82)||(24256660-24256726)
chr3 (16-80)||(8847226-8847289)
chr3 (16-83)||(25641471-25641538)
chr3 (16-83)||(37302662-37302729)
chr3 (16-83)||(55151605-55151672)
chr3 (16-82)||(28539629-28539695)
chr3 (16-60)||(20547901-20547945)
chr3 (16-82)||(35201323-35201389)
chr3 (48-85)||(41505627-41505664)
chr3 (29-83)||(42478086-42478142)
chr3 (16-79)||(11630642-11630705)
chr3 (16-83)||(42889101-42889168)
chr3 (16-55)||(45711355-45711394)
chr3 (16-83)||(51982215-51982282)
chr3 (16-85)||(42997401-42997470)
chr3 (16-81)||(44463473-44463538)
chr3 (16-83)||(14226593-14226660)
chr3 (17-79)||(27511842-27511903)
chr3 (34-79)||(23770637-23770682)
chr3 (17-78)||(24095299-24095359)
chr3 (18-79)||(46965992-46966053)
chr3 (17-82)||(50559101-50559166)
chr3 (17-84)||(9719335-9719403)
chr3 (15-83)||(39630505-39630573)
chr3 (48-92)||(50318280-50318324)
[»] chr2 (49 HSPs)
chr2 (16-83)||(18254097-18254164)
chr2 (16-83)||(2076685-2076752)
chr2 (16-83)||(22888705-22888772)
chr2 (16-85)||(6049231-6049300)
chr2 (22-83)||(21611543-21611604)
chr2 (16-83)||(32477448-32477515)
chr2 (16-83)||(37737859-37737926)
chr2 (16-83)||(41195700-41195767)
chr2 (16-83)||(42421786-42421853)
chr2 (16-83)||(43487495-43487562)
chr2 (27-83)||(9760145-9760201)
chr2 (16-83)||(1248802-1248869)
chr2 (16-83)||(3097749-3097816)
chr2 (16-83)||(9647248-9647315)
chr2 (16-83)||(9990807-9990874)
chr2 (16-82)||(9207706-9207772)
chr2 (16-82)||(41056636-41056702)
chr2 (16-85)||(3838766-3838835)
chr2 (22-83)||(9194363-9194424)
chr2 (16-83)||(13333058-13333125)
chr2 (16-83)||(25270470-25270537)
chr2 (16-83)||(27490618-27490685)
chr2 (16-83)||(41042370-41042437)
chr2 (22-82)||(34944979-34945039)
chr2 (16-82)||(29349622-29349688)
chr2 (21-80)||(42091393-42091454)
chr2 (17-85)||(14255420-14255488)
chr2 (15-85)||(7698286-7698356)
chr2 (16-83)||(19633398-19633466)
chr2 (16-83)||(19830299-19830367)
chr2 (16-83)||(8848585-8848652)
chr2 (48-83)||(22416349-22416384)
chr2 (15-82)||(28494975-28495042)
chr2 (16-79)||(44050131-44050194)
chr2 (17-79)||(31296655-31296717)
chr2 (17-78)||(42430767-42430828)
chr2 (49-85)||(17388501-17388537)
chr2 (28-84)||(42434247-42434303)
chr2 (22-83)||(136049-136107)
chr2 (16-83)||(1352505-1352572)
chr2 (16-83)||(18846727-18846794)
chr2 (36-71)||(19108993-19109028)
chr2 (17-84)||(32701207-32701274)
chr2 (17-83)||(1907651-1907717)
chr2 (17-79)||(3412446-3412508)
chr2 (17-83)||(7663955-7664020)
chr2 (44-85)||(44219367-44219408)
chr2 (17-85)||(9521925-9521993)
chr2 (16-44)||(22416329-22416357)
[»] chr8 (29 HSPs)
chr8 (16-85)||(22719556-22719625)
chr8 (16-83)||(12898817-12898884)
chr8 (16-85)||(42768320-42768389)
chr8 (16-80)||(32501087-32501151)
chr8 (16-83)||(27325874-27325941)
chr8 (16-83)||(29025376-29025443)
chr8 (16-83)||(34186723-34186790)
chr8 (16-83)||(37133750-37133817)
chr8 (16-79)||(43397897-43397960)
chr8 (16-82)||(36660339-36660405)
chr8 (16-92)||(11253421-11253497)
chr8 (16-80)||(36816507-36816571)
chr8 (16-83)||(37449313-37449380)
chr8 (22-84)||(4054173-4054235)
chr8 (22-84)||(7271972-7272034)
chr8 (16-77)||(36251442-36251503)
chr8 (16-83)||(24479339-24479406)
chr8 (21-83)||(10692552-10692614)
chr8 (16-77)||(5277393-5277454)
chr8 (17-83)||(13106597-13106663)
chr8 (16-82)||(32133439-32133505)
chr8 (16-85)||(23754592-23754661)
chr8 (18-83)||(36969562-36969627)
chr8 (15-83)||(10839370-10839438)
chr8 (48-83)||(31249424-31249459)
chr8 (28-85)||(7598836-7598893)
chr8 (17-85)||(5740671-5740739)
chr8 (17-83)||(21526167-21526234)
chr8 (16-84)||(3381458-3381525)
[»] scaffold0056 (1 HSPs)
scaffold0056 (16-83)||(76507-76574)
[»] scaffold0098 (1 HSPs)
scaffold0098 (16-84)||(49411-49479)
[»] scaffold0199 (1 HSPs)
scaffold0199 (16-83)||(8784-8851)
[»] scaffold0519 (1 HSPs)
scaffold0519 (16-92)||(11898-11974)
[»] scaffold0148 (1 HSPs)
scaffold0148 (15-83)||(20789-20857)
[»] scaffold0184 (1 HSPs)
scaffold0184 (16-83)||(16677-16743)
[»] scaffold0078 (1 HSPs)
scaffold0078 (16-83)||(56101-56167)
[»] scaffold0067 (1 HSPs)
scaffold0067 (49-83)||(35660-35694)
[»] scaffold0087 (1 HSPs)
scaffold0087 (16-84)||(53248-53316)


Alignment Details
Target: chr6 (Bit Score: 278; Significance: 1e-155; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 16 - 309
Target Start/End: Original strand, 552909 - 553202
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaatgttttaattcatatttgcaatgctaaaat 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  552909 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaatgttttaattcatatttgcaatgctaaaat 553008  T
Q  116 ccaggtgaagcaaataatgctctatatctaaacatggttcaagttgtagatttgtttcaagaattatttaagttgtatattgttcatttagaaaatgtct 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  553009 ccaggtgaagcaaataatgctctatatctaaacatggttcaagttgtagatttgtttcaagaattatttaagttgtagattgttcatttagaaaatgtct 553108  T
Q  216 ttcacctatgacagtaacatttgctctggaatctgtaactgctggagatgaattaggactacaatattggagatgaagctcaccctatgctact 309  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  553109 ctcacctatgacagtaacatttgctctggaatctgtaactgctggagatgaattaggactacaatattggagatgaagctcaccttatgctact 553202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 32316883 - 32316816
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32316883 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 32316816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 15974724 - 15974791
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15974724 atttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacacaactc 15974791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 18737522 - 18737460
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacac 78  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18737522 attttctttgtaaaattttggttgtcacaaaagttgtcacatacatggatgttcaaataacac 18737460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 34047504 - 34047570
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  34047504 ttttctttgtaaaattttggttgtcacaaaagttgtcacatttatggatgttcaaataacaaaactc 34047570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 33430317 - 33430250
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  33430317 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgtccaaataacacaactc 33430250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 16199566 - 16199633
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  16199566 attttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 16199633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 26595465 - 26595532
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||||||||  |||||||||||| ||| ||||||||||||||||||||||||    
T  26595465 attttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacacaactc 26595532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 31077915 - 31077978
Alignment:
Q  21 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    ||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  31077915 ctttgtaaaattttggttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactca 31077978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 14818048 - 14818116
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| |||| ||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  14818048 atttcctttctaaaattttggttgtcacaaaagttgtcatatatataaatgttcaaataacacaactca 14818116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 22079518 - 22079450
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||||||||| ||||||||||||||||||||||| ||||  || |||||||||||||||||||||||||    
T  22079518 attttctttgcaaaattttggttgtcacaaaagtggtcatctaaatggatgttcaaataacacaactca 22079450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 5694106 - 5694037
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||| ||||||||||||| ||||||| |||||||||||||||| ||| ||||| ||||||||||||||||    
T  5694106 atttcctttgtaaaatttaggttgtctcaaaagttgtcacatacatgaatgtttaaataacacaactcaa 5694037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 1156847 - 1156903
Alignment:
Q  27 aaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  1156847 aaaattttgattgtcacaaaagttatcaaatatatggatgttcaaataacacaactc 1156903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 13689949 - 13689882
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||| ||||||||| ||||||  |||| |||||||||||||||||||||||||||||||||||    
T  13689949 atttcctttataaaattttagttgtcgtaaaaattgtcacatatatggatgttcaaataacacaactc 13689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 277107 - 277174
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||||||||||||||| ||||||  || | | ||||| ||||||||||||||    
T  277107 attttctttgtaaaattttggttgtcacaaaaattgtcatctaaaggaatgtttaaataacacaactc 277174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 11612304 - 11612370
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||||||||||||||||||| || |||||||| || ||||||||||  || ||||||||||||||||    
T  11612304 attttctttgtaaaattttgattatcacaaaaattatcacatatataaatattcaaataacacaact 11612370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 4820483 - 4820550
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||| ||||| |||||||| |||  || || | |||||||||||||||||||    
T  4820483 attttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaactc 4820550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 30457621 - 30457688
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||| ||| ||||||||||| || |||||||||||| ||| ||||||||| || |||||||||||    
T  30457621 attttctatgtgaaattttggttatctcaaaagttgtcatataaatggatgttgaattaacacaactc 30457688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 3853262 - 3853206
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaa 72  Q
    |||||||||||||||| || |||||| |||||||||||| ||| ||| |||||||||    
T  3853262 attttctttgtaaaatctttgttgtctcaaaagttgtcatataaatgaatgttcaaa 3853206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 5080498 - 5080466
Alignment:
Q  52 tcacatatatggatgttcaaataacacaactca 84  Q
    |||||||||||||||||||||||||||||||||    
T  5080498 tcacatatatggatgttcaaataacacaactca 5080466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 17551322 - 17551266
Alignment:
Q  28 aaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    ||||||||||||||||||| | ||||| | | || ||||||||||||||||||||||    
T  17551322 aaattttggttgtcacaaatgctgtcataaaaatagatgttcaaataacacaactca 17551266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 8098532 - 8098497
Alignment:
Q  48 gttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||| ||||||||||||||||||||    
T  8098532 gttgtcacatatatgaatgttcaaataacacaactc 8098497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 24900890 - 24900957
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||  ||||  |||| ||||||| ||| |  |||||||||||||||||||||    
T  24900890 attttctttgtaaaattttaattgttgcaaatgttgtcatataaaatgatgttcaaataacacaactc 24900957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 10826620 - 10826682
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 79  Q
    ||||||||||||| |  ||||||||||||||||| ||||  | |||| |||||||||||||||    
T  10826620 ttttctttgtaaattagtggttgtcacaaaagttatcactcaaatggttgttcaaataacaca 10826682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 33657006 - 33657067
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacac 78  Q
    ||||| |||||||||| |||||||||||||| | |||||||  || | ||||||||||||||    
T  33657006 ttttcgttgtaaaattatggttgtcacaaaaatggtcacatgaatagttgttcaaataacac 33657067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 30423507 - 30423443
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    ||||||||| ||||  |||| ||||  |||||||| ||||||| || ||||||||||||||||||    
T  30423507 attttctttataaagctttgattgtatcaaaagttatcacataaatagatgttcaaataacacaa 30423443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 28306087 - 28306018
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28306087 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 28306018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 33037636 - 33037713
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaatgttttaa 93  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  33037636 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactccttgttttaa 33037713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 7287144 - 7287076
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7287144 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactca 7287076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 18258748 - 18258681
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18258748 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 18258681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 26791199 - 26791132
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26791199 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26791132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 1671658 - 1671725
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1671658 atttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 1671725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 41321371 - 41321439
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  41321371 atttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatattcaaataacacaactca 41321439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 5168299 - 5168366
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  5168299 attttctttgtaaaattttagttgtcacaaaagttgtcatatatatgaatgttcaaataacacaactc 5168366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 14051270 - 14051203
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  14051270 attttctttgtaaaattttggttgtcacaaaagttatcacatatatggatgtttgaataacacaactc 14051203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 1764340 - 1764406
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1764340 atttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaact 1764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 35634785 - 35634723
Alignment:
Q  21 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  35634785 ctttgtaaaattttggttatcataaaagttgtcacatatatggatgttcaaataacacaactc 35634723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 15479585 - 15479654
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    ||||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15479585 attttttttgtaaaattttaattgtcacaaaagttgtcacatttatggatgttcaaataacacaactcaa 15479654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 36739070 - 36739131
Alignment:
Q  22 tttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  36739070 tttgtaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 36739131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 7076523 - 7076464
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataa 75  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7076523 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataa 7076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 7552922 - 7552855
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||| ||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  7552922 attttctttgcaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactc 7552855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 17626102 - 17626169
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  17626102 attttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 17626169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 1274479 - 1274540
Alignment:
Q  21 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  1274479 ctttgtaaaattttggttg-cataaaagttgtcacatatatggatgttcaaataacacaactc 1274540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 13168638 - 13168704
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  13168638 atttcctttgtaaaattttgattgtcacaaaagttgtcacatatatgaatgttgaaataacacaact 13168704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 14923195 - 14923257
Alignment:
Q  22 tttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||    
T  14923195 tttgtaaaattttggttttcacgaaagttgtcacatatatcgatgttcaaataacacaactca 14923257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 3565200 - 3565267
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||||||||| |||||||||||||  |  |||||||||||||||||||||||    
T  3565200 attttctttgtaaaattttggttgtctcaaaagttgtcactcaagtggatgttcaaataacacaactc 3565267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 8687007 - 8687074
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||||||||| ||||    
T  8687007 attttctttgtaaaattttgattgttataaaagttgtcacatatatgaatgttcaaataacactactc 8687074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 22972233 - 22972300
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||| |||||| |||||||||| | ||| ||||||||||||||||||||||||    
T  22972233 attttctttgtaaaattttagttgtctcaaaagttgttatataaatggatgttcaaataacacaactc 22972300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 28467408 - 28467341
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  28467408 atttcctttataaaattttggttgtcacaaaaattgtcacatatatgaatgttcagataacacaactc 28467341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 39591796 - 39591863
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||| || |||||||||||||||||||||    
T  39591796 attttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactc 39591863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 39592188 - 39592255
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||| || |||||||||||||||||||||    
T  39592188 attttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactc 39592255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 39054703 - 39054768
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 81  Q
    |||||||||| ||||||||| || |||||||||||||||  || ||||||||||||||||||||||    
T  39054703 attttctttgcaaaattttgattatcacaaaagttgtcatctaaatggatgttcaaataacacaac 39054768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 2972452 - 2972504
Alignment:
Q  28 aaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    |||||||| |||||||||||||||||||||||||  |||||||||||||||||    
T  2972452 aaattttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaa 2972504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 42175035 - 42175101
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||| |||| ||||||||||  ||||| |||||||| ||||||||| ||||||||||||||||||||    
T  42175035 atttcctttataaaattttgactgtcataaaagttgacacatatatcgatgttcaaataacacaact 42175101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 13309999 - 13310063
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    ||||||||||||||| |||| ||||| ||||| ||||||  || |||||||||||||||||||||    
T  13309999 attttctttgtaaaaatttgattgtctcaaaaattgtcatctaaatggatgttcaaataacacaa 13310063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 35646518 - 35646554
Alignment:
Q  47 agttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||||| ||||||||||||||    
T  35646518 agttgtcacatatatggatgtttaaataacacaactc 35646554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 4719768 - 4719834
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||| |||   |||||||||||||||  ||| ||||||||||||| |||||    
T  4719768 ttttctttgcaaaattttggatgtactaaaagttgtcacataattggttgttcaaataacataactc 4719834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 21353261 - 21353327
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||| |||||||| ||||||||||||   | |||| |||| ||||||| ||||||    
T  21353261 ttttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgtttaaataactcaactc 21353327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 4088562 - 4088627
Alignment:
Q  18 tttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||| | || |||||||| | ||||||| | | || |||||||||||||||||||||    
T  4088562 tttctttgtaaaaatatgattgtcacataggttgtcaaaaaaatagatgttcaaataacacaactc 4088627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 10649553 - 10649613
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacac 78  Q
    ||||||||||||| || |||||||||||||||||||||   | |||| ||||||||||||||    
T  10649553 ttttctttgtaaa-ttatggttgtcacaaaagttgtcaaccaaatggttgttcaaataacac 10649613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 21156104 - 21156173
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||||||||||||||||||| ||||  |||  ||| ||| ||| |  |||||||||||||||||||||||    
T  21156104 attttctttgtaaaattttgtttgttgcaagggttatcatataaaatgatgttcaaataacacaactcaa 21156173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 19952115 - 19952179
Alignment:
Q  15 aattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 79  Q
    ||||||||||||||| || ||||||||   |||||||| ||||| |||| | |||||||||||||    
T  19952115 aattttctttgtaaatttatggttgtccataaagttgtgacataaatggtttttcaaataacaca 19952179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 26732341 - 26732408
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26732341 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26732408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 53801714 - 53801644
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaat 86  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53801714 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaat 53801644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 51986158 - 51986225
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51986158 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 51986225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 10250470 - 10250406
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10250470 attttctttgtaaaattttggttgtcacaaaagttgtcgcatatatggatgttcaaataacacaa 10250406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 23369287 - 23369220
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23369287 atttcctttgtaagattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 23369220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 29175341 - 29175408
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29175341 atttactttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 29175408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 44539850 - 44539917
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44539850 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 44539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 37297166 - 37297231
Alignment:
Q  18 tttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37297166 tttccttgtaaaattttggttgtcacaaaagttgtcaaatatatggatgttcaaataacacaactc 37297231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 43175100 - 43175168
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  43175100 atttcctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttcaaataacacaactca 43175168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 15175662 - 15175729
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  15175662 atttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataatacaactc 15175729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 27051041 - 27050978
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 79  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  27051041 attttctttgtaaaattttggttgtcacaaaagttgtcacatttatgaatgttcaaataacaca 27050978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 27965111 - 27965168
Alignment:
Q  26 taaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27965111 taaaattttggttgtcacagaagttgtcacatatatggatgttcaaataacacaactc 27965168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 11068804 - 11068868
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  11068804 atttcctttgtaaaattttggttgccacaaaagttgtcacatatatgaatgttcaaataacacaa 11068868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 24575806 - 24575742
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24575806 atttcctttataaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaa 24575742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 26724927 - 26724855
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaatgt 88  Q
    |||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  26724927 atttcctttgtaaaattttagttgttacaaaagttatcacatatatggatgttcaaataacacaactctatgt 26724855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 38376445 - 38376377
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||||||||||||||||||| ||||||||||| || |||||||||| ||||||||||||||||||||||    
T  38376445 attttctttgtaaaattttgattgtcacaaaaattatcacatatatagatgttcaaataacacaactca 38376377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 46213086 - 46213154
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  46213086 atttcctttgtaaaattttggttgttacaaaagttttcacatatatggattttcaaataacacaactca 46213154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 26492123 - 26492190
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  26492123 atttcctttgtaaaattttgattgtcacaaaaattgtcacatatatagatgttcaaataacacaactc 26492190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 38382437 - 38382504
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  38382437 attttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 38382504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 39440600 - 39440667
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  39440600 atttcctttctaaaattttgattgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 39440667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 39478553 - 39478620
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  ||||||||||    
T  39478553 attttctttgtaaaattttggttgtcacaaaagttgtcatatatatggatgtttaataaacacaactc 39478620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 47181957 - 47182024
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  47181957 attttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 47182024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 48402152 - 48402085
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  48402152 attttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 48402085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 2575745 - 2575678
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||| || |||||||||||||||||||||    
T  2575745 attttctttgtaaaactttagttgtcacaaaagttgtcatataaatagatgttcaaataacacaactc 2575678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 31641520 - 31641453
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||| ||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||    
T  31641520 atttcctttataaaattttggttgtcacaaaagttatcacgtatatgaatgttcaaataacacaactc 31641453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 34616677 - 34616744
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| || |||||||||||||||||||||    
T  34616677 attttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaactc 34616744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 56364000 - 56363933
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||||||||| ||||||||||||  || ||||||||||||||||||||||||    
T  56364000 attttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaataacacaactc 56363933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 45083088 - 45083149
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataaca 77  Q
    ||||||||| |||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  45083088 attttctttataaaattttgattgtaataaaagttgtcacatatatggatgttcaaataaca 45083149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 5622574 - 5622641
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||| ||| ||||||||||||| |||||||| ||| |||||||||||||||||    
T  5622574 atttcctttgtaaaattttagttatcacaaaagttgtgacatatatagatcttcaaataacacaactc 5622641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 36178022 - 36178089
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||| ||||||||| ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  36178022 atttcctttataaaattttagttgtcacaaaagttatcacatatataaatgttcaaataacacaactc 36178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 37997370 - 37997433
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 79  Q
    ||||||||||||||||||||||||| |||||| || |||||||||| |||||||||||| ||||    
T  37997370 attttctttgtaaaattttggttgtaacaaaaattatcacatatatagatgttcaaatagcaca 37997433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 38134469 - 38134528
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataa 75  Q
    |||| |||||||||||||||||| |||||||||||||||||| |||| ||||||||||||    
T  38134469 atttcctttgtaaaattttggttatcacaaaagttgtcacatgtatgaatgttcaaataa 38134528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 53786142 - 53786099
Alignment:
Q  44 aaaagttgtcacatatatggatgttcaaataacacaactcaatg 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  53786142 aaaagttgtcacatatatggatgttcaaataacacaactcaatg 53786099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 5233621 - 5233556
Alignment:
Q  20 tctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||||||||||||||| ||||  |||||||||| ||||| || |||||||||||||||||||||||    
T  5233621 tctttgtaaaattttgattgtttcaaaagttgttacataaatagatgttcaaataacacaactcaa 5233556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 19473911 - 19473847
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    |||||||||||||||||||| ||||| |||||||||||| ||| ||| || ||||||||||||||    
T  19473911 attttctttgtaaaattttgattgtctcaaaagttgtcatataaatgcatcttcaaataacacaa 19473847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 39195173 - 39195240
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||| |||| || ||||||| ||||||| ||| || |||||||||||||||||||||    
T  39195173 attttctttgtaaaactttgattatcacaaatgttgtcatataaatagatgttcaaataacacaactc 39195240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 42853693 - 42853760
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||| ||||| ||||| |||||||  | ||||||||||||||||||||||||    
T  42853693 attttctttataaaattttgattgtctcaaaaattgtcactcaaatggatgttcaaataacacaactc 42853760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 7632416 - 7632346
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaat 86  Q
    ||||| |||||||||||||||||||  |||| ||||||| ||| |  ||||||||||||||||||||||||    
T  7632416 attttatttgtaaaattttggttgttgcaaaggttgtcatataaaatgatgttcaaataacacaactcaat 7632346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 46634235 - 46634273
Alignment:
Q  47 agttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||||||||||||||||||||||||||||||||||||||    
T  46634235 agttgtcacatatatggatgttcaaataacacaactcaa 46634273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 50831709 - 50831643
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||| |||||||| ||||||||||||   | |||| |||||||||||||||||||    
T  50831709 ttttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactc 50831643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 26908027 - 26907967
Alignment:
Q  26 taaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaat 86  Q
    |||||||||  |||||| |||| || |||||||||||||| ||||||||||||||||||||    
T  26908027 taaaattttaattgtcataaaaattatcacatatatggatattcaaataacacaactcaat 26907967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 39606088 - 39606156
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| |||| ||||||||||||| ||  ||||||||||||||||||  |||||||||||| ||||||||    
T  39606088 atttcctttataaaattttggttatcgtaaaagttgtcacatatataaatgttcaaataatacaactca 39606156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 2268442 - 2268407
Alignment:
Q  48 gttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||||||||||||||||||||    
T  2268442 gttgtcacatatatggatgttcaaataacacaactc 2268407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 50721699 - 50721632
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||| |||||  |||| ||||||| ||| |  |||||||||||||||||||||    
T  50721699 attttctttgtaaaattttagttgttgcaaaggttgtcatataaaatgatgttcaaataacacaactc 50721632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 3316471 - 3316529
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataa 75  Q
    |||| |||||||||||||| ||||| ||||||||||||  || ||||||||||||||||    
T  3316471 ttttttttgtaaaattttgattgtctcaaaagttgtcatctaaatggatgttcaaataa 3316529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 19232088 - 19232022
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| ||||||||||||||   |||| ||||||||||  ||| |||||||||||||||||||    
T  19232088 ttttctttgcaaaattttggttgtactaaaaattgtcacataattggttgttcaaataacacaactc 19232022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 42491191 - 42491257
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||| ||||| |||||||| ||||||||||||   | |||| |||||||||||||||||||    
T  42491191 ttttctttgtgaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactc 42491257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 42360292 - 42360329
Alignment:
Q  48 gttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  42360292 gttgtcacatatatgaatgttcaaataacacaactcaa 42360329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 56271478 - 56271538
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacac 78  Q
    ||||||||||||| || ||||||||| ||||||||||| | | |||||||||||||||||||    
T  56271478 ttttctttgtaaa-ttatggttgtcataaaagttgtcaaacaaatggatgttcaaataacac 56271538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 19174730 - 19174666
Alignment:
Q  15 aattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 79  Q
    ||||||||||||||| || || ||||| |||||||||||||| |  ||| |||||||||||||||    
T  19174730 aattttctttgtaaatttatgtttgtctcaaaagttgtcacacaattggttgttcaaataacaca 19174666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 24045910 - 24045978
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    ||||| |||| ||||||||| ||||   |||||||||||||||  ||| ||||||||||||||||||||    
T  24045910 attttatttgcaaaattttgattgtactaaaagttgtcacataattggttgttcaaataacacaactca 24045978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 49449092 - 49449036
Alignment:
Q  24 tgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    ||||||||||||||||||  ||||||||||| ||| ||| ||||| |||||||||||    
T  49449092 tgtaaaattttggttgtcttaaaagttgtcatataaatgaatgtttaaataacacaa 49449036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 56474722 - 56474656
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||||||||||||| ||||||||||| ||||| |||| |  |  || ||||||||||||||||||||    
T  56474722 attttctttgtaaagttttggttgtctcaaaaattgttatgtgaatagatgttcaaataacacaact 56474656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 25123214 - 25123178
Alignment:
Q  44 aaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  25123214 aaaagttgttacatatatgaatgttcaaataacacaa 25123178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 27354309 - 27354257
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgtt 68  Q
    ||||| ||||||||||||||||||||  |||| |||||| ||| |||||||||    
T  27354309 attttttttgtaaaattttggttgtcttaaaatttgtcatataaatggatgtt 27354257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 39259080 - 39259136
Alignment:
Q  27 aaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||  ||||||||||| ||||||  || |||||| |||||||||||||||||    
T  39259080 aaaattttaattgtcacaaaaattgtcatctaaatggatattcaaataacacaactc 39259136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 38956573 - 38956505
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38956573 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 38956505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 41989694 - 41989627
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41989694 ttttttttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactca 41989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 3937078 - 3937011
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3937078 atttcctttataaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaactc 3937011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 43942748 - 43942815
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  43942748 attttctttgtaaaattttggttgccacaaaaattatcacatatatggatgttcaaataacacaactc 43942815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 44895527 - 44895460
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  44895527 atttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacataactc 44895460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 25192872 - 25192805
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||| || |||||||||||||||||    
T  25192872 attttctttgtaaaattttagttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactc 25192805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 46022222 - 46022155
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  46022222 attttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 46022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 32529811 - 32529745
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||    
T  32529811 atttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgctcaaataacacaact 32529745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 7701660 - 7701727
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| ||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  7701660 attttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 7701727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 24614271 - 24614204
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||| || ||||||||||| ||||||||||| ||||||||||||||||||||    
T  24614271 atttcctttgtaaaattttgattatcacaaaagttatcacatatatgaatgttcaaataacacaactc 24614204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 40112909 - 40112842
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||| |||||| | ||||||| ||||||||||||||||||||||||||||||    
T  40112909 atttcctttgtaaaattttgattgtcagagaagttgttacatatatggatgttcaaataacacaactc 40112842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 43025456 - 43025523
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||| ||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  43025456 atttcctttgtaaaattttagttgttacaaaagttgtcacatatatagatgttcgaataacacaactc 43025523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 22918124 - 22918054
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaat 86  Q
    |||| ||||||||||||||| ||||| ||||||||||||||| |||||||| |||||||| ||||||||||    
T  22918124 atttcctttgtaaaattttgattgtcgcaaaagttgtcacatgtatggatgctcaaataatacaactcaat 22918054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 40417892 - 40417958
Alignment:
Q  18 tttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||||||||||||||||||||||| |||||||||||  ||| || ||||||||||||||||||||||    
T  40417892 tttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgttcaaataacacaactca 40417958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 45851162 - 45851093
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||| |||||||||||||| ||||||| |||| |||| ||| ||||||||||||||||||||||||||||    
T  45851162 atttcctttgtaaaattttagttgtcaaaaaaattgtgacagatatggatgttcaaataacacaactcaa 45851093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 3614397 - 3614334
Alignment:
Q  20 tctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||||  |||||||||||| ||| |||||||||||||||||| |||||    
T  3614397 tctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacataactc 3614334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 35072317 - 35072250
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||||||||  |||||||||||| ||| ||||||||||| ||||||||||||    
T  35072317 attttctttataaaattttggttgtttcaaaagttgtcatataaatggatgttcagataacacaactc 35072250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 35098658 - 35098591
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||| | |||||||||||||||  |||||||||||| ||| |||||| |||||||||||||||||    
T  35098658 attttctatataaaattttggttgtttcaaaagttgtcatataaatggatattcaaataacacaactc 35098591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 41189498 - 41189424
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcac--atatatggatgttcaaataacacaactcaatgt 88  Q
    |||| ||||||||||||||| |||||| ||||||| ||||  ||||||| |||||||||||||||||||| ||||    
T  41189498 atttcctttgtaaaattttgattgtcataaaagttatcacatatatatgaatgttcaaataacacaactctatgt 41189424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 43159529 - 43159462
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    ||||||||||||| || |||||||||  ||||||||||| || |||| ||||||||||||||||||||    
T  43159529 ttttctttgtaaatttatggttgtcatcaaagttgtcacctaaatggttgttcaaataacacaactca 43159462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 38944913 - 38944979
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||||||||||||||||||| |||||  ||||||||||| ||| ||| ||||| |||||||||||||    
T  38944913 attttctttgtaaaattttgattgtcttaaaagttgtcatataaatgaatgtttaaataacacaact 38944979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 46578080 - 46578022
Alignment:
Q  26 taaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    ||||||||||||||||| | || || |||||||||||||||||||||||| ||||||||    
T  46578080 taaaattttggttgtcatagaaattatcacatatatggatgttcaaataagacaactca 46578022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 35600789 - 35600856
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    ||||||||||||| |  ||||||||||||||||||||||  | |||| ||||||||||||||| ||||    
T  35600789 ttttctttgtaaattagtggttgtcacaaaagttgtcactcaaatggttgttcaaataacacacctca 35600856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 38073356 - 38073391
Alignment:
Q  48 gttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||||||||||||||||||||    
T  38073356 gttgtcacatatatggatgttcaaataacacaactc 38073391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 32803813 - 32803870
Alignment:
Q  24 tgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 81  Q
    |||||||||||  ||||  |||||||||||| ||| ||||||||||||||||||||||    
T  32803813 tgtaaaattttaattgtttcaaaagttgtcatataaatggatgttcaaataacacaac 32803870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 13401613 - 13401550
Alignment:
Q  21 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    ||||||||| |  |||||||||||||| ||||||| || |||| ||||||||||||||| ||||    
T  13401613 ctttgtaaattagtggttgtcacaaaaattgtcacttaaatggttgttcaaataacacacctca 13401550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 31445434 - 31445501
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||| ||||  ||||| || ||| ||| |  |||||||||||||||||||||    
T  31445434 attttctttgtaaaattttgattgttgcaaaaattatcatataaaatgatgttcaaataacacaactc 31445501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 42553015 - 42553078
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    |||||||||||||||| ||||| || |||||||| |||  || |||| ||||||||||||||||    
T  42553015 ttttctttgtaaaattatggttttctcaaaagttatcaattaaatggttgttcaaataacacaa 42553078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 48062173 - 48062240
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||| ||||| ||||| || ||||  | | ||||||||||||||||||||||    
T  48062173 attttctttataaaattttgattgtctcaaaaattatcactcaaacggatgttcaaataacacaactc 48062240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 10700140 - 10700066
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaatgtttt 91  Q
    |||||||| ||||||| |||||||| ||||||||||||   | |||  |||||||||||||||||  ||||||||    
T  10700140 ttttctttataaaattatggttgtcccaaaagttgtcaatcaaatgattgttcaaataacacaacagaatgtttt 10700066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 41018781 - 41018847
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||| || || |||||| |||||||||||| || || | | |||||||||||||||||    
T  41018781 ttttctttgtaaatttatgattgtcataaaagttgtcacctaaatagttattcaaataacacaactc 41018847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 35207617 - 35207679
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    ||||| |||||||||||||||||||| ||||  || ||  ||| |||||||||||||||||||||    
T  35207617 attttatttgtaaaattttggttgtctcaaa--ttatcctataaatggatgttcaaataacacaa 35207679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 26469475 - 26469543
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26469475 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 26469543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 27465012 - 27464945
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27465012 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 27464945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 31088297 - 31088364
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31088297 attttttttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 31088364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 45121436 - 45121369
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45121436 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 45121369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 649885 - 649952
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  649885 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatgtggatgttcaaataacacaactc 649952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 19055714 - 19055647
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19055714 atttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 19055647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 48470755 - 48470822
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48470755 atttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 48470822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 3981981 - 3981912
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||    
T  3981981 attttctttgtaaaattttgattgtcacaaatgttgtcacatttatggatgttcaaataacacaactcaa 3981912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 35369816 - 35369884
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35369816 atttcctttataaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacacctca 35369884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 44519106 - 44519038
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  44519106 atttcctttgtaaaattttggttatcacaaaagttgtcacatatatgaatgttcaaataacacaactca 44519038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 50726203 - 50726135
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  50726203 attttctttgcaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactca 50726135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 33100924 - 33100991
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33100924 atttcctttataaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 33100991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 37619660 - 37619729
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||    
T  37619660 atttcctttgtaaaattttggttgtaataaaagttgtcacatatatggatgttcaaataacataactcaa 37619729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 45640419 - 45640484
Alignment:
Q  18 tttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||    
T  45640419 tttctttgtaaaattttggttgcaacaaaagttgtcacatatatagatgttcaaataacacaactc 45640484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 50932420 - 50932481
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataaca 77  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50932420 atttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataaca 50932481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 8350142 - 8350086
Alignment:
Q  28 aaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8350142 aaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactca 8350086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 21401514 - 21401581
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||| ||||  |||||||||||||||| ||||||||||||||||||||||||    
T  21401514 attttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaataacacaactc 21401581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 23645527 - 23645594
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  23645527 atttcctttgtaaaattttggttgtcacaaaagttgttacatatatgtatgttcaaataacataactc 23645594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 3851274 - 3851335
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataaca 77  Q
    |||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3851274 atttcctttataaaattttggttgtcataaaagttgtcacatatatggatgttcaaataaca 3851335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 2571751 - 2571819
Alignment:
Q  16 attttctttgt-aaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||| |||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  2571751 attttctttgttaaaattttggttgtcacaaaagttgtcatatgcatggatgttcaaataacacaactc 2571819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 43775322 - 43775386
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| || ||||||||||||||    
T  43775322 attttctttgtaaaattttgattgtcataaaagttgtcacatatatgaatattcaaataacacaa 43775386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 52576257 - 52576189
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatgga-tgttcaaataacacaactc 83  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||    
T  52576257 atttcctttgtaaaattttggttgtcacaaaagttgtcacctatatgaattgttcaaataacacaactc 52576189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 37274988 - 37274921
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||    
T  37274988 atttcctttgcaaaattttgattgtcacaaaagttgtcacatgtaaggatgttcaaataacacaactc 37274921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 44914527 - 44914459
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaag-ttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||||||||    
T  44914527 atttcctttgtaaaattttgattgtcgcaaaaaattgtcacatatatggatgttcaaataacacaactc 44914459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 9566915 - 9566848
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||| |||||||||||||||||| |||||||||||| |||  || ||||||||||||||||||||    
T  9566915 attttctatgtaaaattttggttgtctcaaaagttgtcatataattgaatgttcaaataacacaactc 9566848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 18434911 - 18434978
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||| ||||||||||||||||||||||||||||  || || ||| |||||||||||||||||    
T  18434911 attttctttgcaaaattttggttgtcacaaaagttgtcatctaaatagattttcaaataacacaactc 18434978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 19947698 - 19947631
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||||||| |||||||||||||||| |||||||||||| ||| ||  |||||||||||||||||||||    
T  19947698 ttttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaactca 19947631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 40861217 - 40861154
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 79  Q
    |||| |||| ||||||||| |||||||||||||||| ||||||||| |||||||||||||||||    
T  40861217 atttcctttataaaattttagttgtcacaaaagttgacacatatatagatgttcaaataacaca 40861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 46907311 - 46907378
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||| ||||| |||||||||||  ||| ||||||||||||||||||||||||    
T  46907311 attttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaataacacaactc 46907378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 48103318 - 48103247
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatg-ttcaaataacacaactcaat 86  Q
    |||||||||||||||||||||||||| |||||||||||| ||| || |||| |||||||| |||||||||||    
T  48103318 attttctttgtaaaattttggttgtctcaaaagttgtcatataaatagatgtttcaaatatcacaactcaat 48103247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 50333337 - 50333388
Alignment:
Q  29 aattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  50333337 aattttggttgtcacaaaagttgtcacatatatggatggttaaataacacaa 50333388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 30467487 - 30467421
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||| ||| ||||||||||||||||||| |||  | |||||||||||||||||||||    
T  30467487 ttttctttgtaaaactttagttgtcacaaaagttgtcatataattagatgttcaaataacacaactc 30467421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 6809696 - 6809757
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataaca 77  Q
    ||||||| | |||||||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  6809696 attttctatataaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataaca 6809757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 45333827 - 45333896
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||| ||||||||||||||  ||||||||||| || |||||||||| |||||||||||||||||| ||||    
T  45333827 atttcctttgtaaaattttaattgtcacaaaaattatcacatatatagatgttcaaataacacaattcaa 45333896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 31827067 - 31827143
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaatgtttta 92  Q
    ||||| |||||||||||||||||||  ||||||||||||  || || ||||||||||||||||||||| || |||||    
T  31827067 attttttttgtaaaattttggttgtatcaaaagttgtcatctaaatagatgttcaaataacacaactctatttttta 31827143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 30735248 - 30735181
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||| |||||||||| ||||||||||| || ||||||| |||||| |||||||||||||||||    
T  30735248 atttactttataaaattttgattgtcacaaaaattatcacatacatggatattcaaataacacaactc 30735181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 50149062 - 50149129
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||| ||||  |||||||||||| ||| |  |||||||||||||||||||||    
T  50149062 attttctttgtaaaattttgattgttgcaaaagttgtcatataaaatgatgttcaaataacacaactc 50149129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 51571300 - 51571231
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaat 86  Q
    |||||||||||||||| |||||||| ||||| ||||||   | |||| ||||||||||||||||||||||    
T  51571300 ttttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatggttgttcaaataacacaactcaat 51571231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 15470011 - 15469944
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| |||| |||||||||  ||||||||||| || ||||||||||| |||||||||||||||||||||    
T  15470011 atttcctttataaaattttaattgtcacaaaa-ttatcacatatatgaatgttcaaataacacaactca 15469944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 41677260 - 41677224
Alignment:
Q  47 agttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||||||||||||||||||||    
T  41677260 agttgtcacatatatggatgttcaaataacacaactc 41677224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 37685451 - 37685513
Alignment:
Q  22 tttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||||||||||||  ||||||||||| || |||||| |||| |||||||||||||| ||||||    
T  37685451 tttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactca 37685513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 37700067 - 37700005
Alignment:
Q  22 tttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||||||||||||  ||||||||||| || |||||| |||| |||||||||||||| ||||||    
T  37700067 tttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactca 37700005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 50775110 - 50775044
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||| |||||||||||||| ||||||   | ||||  ||||||||||||||||||    
T  50775110 ttttctttgtaaaattatggttgtcacaaaatttgtcaatcaaatggtcgttcaaataacacaactc 50775044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 51718581 - 51718518
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||| |||| ||| ||||||||||||||||    ||||||||||||||||||||||||    
T  51718581 atttcctttgtaaagttttagttatcacaaaagttgtcac----atggatgttcaaataacacaactc 51718518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 26207957 - 26208026
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||||||||| ||||||||| || ||||||||||| | |  || || |||||||||||||||||||||||    
T  26207957 attttctttgcaaaattttgattatcacaaaagttataatctaaatagatgttcaaataacacaactcaa 26208026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 26021030 - 26020970
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataaca 77  Q
    |||| |||||||||||||| ||||| |||||| ||||| ||| ||| ||||||||||||||    
T  26021030 ttttttttgtaaaattttgattgtctcaaaagatgtcatataaatgaatgttcaaataaca 26020970  T

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Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 30570642 - 30570706
Alignment:
Q  18 tttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||||||||||||||||| ||||  ||||| || ||| ||| ||| |||||||||||||||||||    
T  30570642 tttctttgtaaaattttgattgtttcaaaaattatcatataaatgaatgttcaaataacacaact 30570706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 3672429 - 3672495
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||| ||||||||||||||   |||||||||||||||  ||| |||| ||||||||||||||    
T  3672429 ttttttttgcaaaattttggttgtactaaaagttgtcacataattggttgtttaaataacacaactc 3672495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 9988068 - 9988134
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    ||||| |||||||||||||||||||  |||| ||||| | ||| |  ||||||||||||||||||||    
T  9988068 attttatttgtaaaattttggttgttgcaaaggttgtaatataaaatgatgttcaaataacacaact 9988134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 47214325 - 47214390
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||| |||||||||||| | ||||||||||| |  ||| |||||||||||||| ||||    
T  47214325 ttttctttgtaaa-ttttggttgtcaaataagttgtcacaaaattggttgttcaaataacaccactc 47214390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 49065319 - 49065253
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    ||||||||||||||||||||||| ||   ||| |||||| ||| || ||| ||||||||||||||||    
T  49065319 attttctttgtaaaattttggttatctttaaaattgtcatataaatagatattcaaataacacaact 49065253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 51286321 - 51286256
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||| |||||||||||| | ||||||||||| |  ||| |||||||||||||| ||||    
T  51286321 ttttctttgtaaa-ttttggttgtcaaataagttgtcacaaaattggttgttcaaataacactactc 51286256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 2269517 - 2269460
Alignment:
Q  26 taaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||  |||||||||||| |||  || || |||||||||||||||||    
T  2269517 taaaattttggttgtatcaaaagttgtcatataattgaatattcaaataacacaactc 2269460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 49647096 - 49647039
Alignment:
Q  26 taaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||  |||||||||||| ||| ||| |||||||||||||| |||||    
T  49647096 taaaattttagttgtttcaaaagttgtcatataaatgaatgttcaaataacataactc 49647039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 50239101 - 50239056
Alignment:
Q  34 tggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 79  Q
    ||||||||||||||||||||||  | |||| |||||||||||||||    
T  50239101 tggttgtcacaaaagttgtcactcaaatggttgttcaaataacaca 50239056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 6693297 - 6693329
Alignment:
Q  52 tcacatatatggatgttcaaataacacaactca 84  Q
    ||||||||||| |||||||||||||||||||||    
T  6693297 tcacatatatgaatgttcaaataacacaactca 6693329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 80
Target Start/End: Original strand, 12657359 - 12657391
Alignment:
Q  48 gttgtcacatatatggatgttcaaataacacaa 80  Q
    ||||||||||||||||||||| |||||||||||    
T  12657359 gttgtcacatatatggatgttgaaataacacaa 12657391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 6e-28; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 27541457 - 27541390
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27541457 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 27541390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 32924236 - 32924169
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32924236 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 32924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 36670963 - 36670892
Alignment:
Q  22 tttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaatgttttaa 93  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  36670963 tttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactcaattttttaa 36670892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 13735846 - 13735914
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13735846 atttcctttgcaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 13735914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 16969521 - 16969453
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16969521 atttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 16969453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 42357039 - 42356972
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42357039 atttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 42356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 52939767 - 52939834
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  52939767 atttcctttgtaaaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactc 52939834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 7934095 - 7934159
Alignment:
Q  21 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7934095 ctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaataacacaactcaa 7934159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 19149106 - 19149174
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19149106 atttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgttcaaataacacaactca 19149174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 33939354 - 33939421
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33939354 atttcctttgaataattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 33939421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 35377036 - 35376969
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  35377036 attttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactc 35376969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 38926744 - 38926811
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  38926744 atttcctttgtaaaattttggttgtcacgaaagttgtcacatatatagatgttcaaataacacaactc 38926811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 41309233 - 41309300
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  41309233 attttctttgtaaaattttgattgtcacaaaagttatcgcatatatggatgttcaaataacacaactc 41309300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 44856069 - 44856136
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  44856069 atttcctttgtaaaattttggttgtcatacaagttgtcacatatatggatgttcaaataacacaactc 44856136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 46624023 - 46624090
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||    
T  46624023 attttctttgtaaaattttgattgtcacaaaagttatcacatgtatggatgttcaaataacacaactc 46624090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 47472445 - 47472512
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  47472445 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacataactc 47472512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 35597283 - 35597344
Alignment:
Q  21 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  35597283 ctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatattcaaataacacaact 35597344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 42358593 - 42358529
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42358593 atttcctttgcaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 42358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 13348089 - 13348022
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| |||||    
T  13348089 attttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataacataactc 13348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 21217628 - 21217695
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  21217628 attttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 21217695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 26014928 - 26014995
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  26014928 atttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatagatgtttaaataacacaactc 26014995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 37057012 - 37056945
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  37057012 attttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 37056945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 44413350 - 44413283
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||    
T  44413350 atttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagatgttcaaataacacaactc 44413283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 52254093 - 52254026
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||    
T  52254093 atttcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaatgacacaactc 52254026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 52326135 - 52326202
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  52326135 atttcctttgtaaaattttgattgtcataaaagttgtcatatatatggatgttcaaataacacaactc 52326202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 7668141 - 7668079
Alignment:
Q  18 tttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7668141 tttccttgcaaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaa 7668079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 23592574 - 23592640
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||    
T  23592574 attttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23592640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 23600709 - 23600775
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||    
T  23600709 attttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23600775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 5244345 - 5244413
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| ||||    
T  5244345 atttcctttgtaaaattttggttgtcacaaaaattgtcacatatataaatgttcaaataacacacctca 5244413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 31157633 - 31157565
Alignment:
Q  15 aattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||| ||||||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||    
T  31157633 aatttcctttgtaaaattttgatagtcacagaagttatcacatatatggatgttcaaataacacaactc 31157565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 37503702 - 37503634
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  37503702 atttcctttgcaaaattttggttgtcacaaaagttatcacatatataaatgttcaaataacacaactca 37503634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 44813251 - 44813319
Alignment:
Q  15 aattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| |||||||||    
T  44813251 aatttcctttgtaaaattttgattgccacaaaagttgtcacatatatagatgttcaaatcacacaactc 44813319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 288848 - 288911
Alignment:
Q  22 tttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||||||||||||| |||| |||| ||||||||||||||||||| |||||||||||||||||||    
T  288848 tttgtaaaattttgattgttacaatagttgtcacatatatggattttcaaataacacaactcaa 288911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 5114194 - 5114261
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||| |||||| |||| |||||||||| || |||||||||||||||||||||    
T  5114194 attttctttgtaaaattttgattgtcataaaaattgtcacataaatagatgttcaaataacacaactc 5114261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 44383305 - 44383372
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||| ||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  44383305 attttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 44383372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 44445410 - 44445477
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| ||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |||||    
T  44445410 attttctttataaaattttggttgtcataaaagttgttacatatatcgatgttcaaataacataactc 44445477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 24256726 - 24256660
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  24256726 atttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagattttcaaataacacaact 24256660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 8847226 - 8847289
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    ||||| |||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  8847226 attttatttgtaaaattttgattatcacaaaagttgt-acatatatggatgttcaaataacacaa 8847289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 25641538 - 25641471
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||| ||||||| |||||||||| |||||||||||| ||| |||||||||||||||| |||||||    
T  25641538 attttctatgtaaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataatacaactc 25641471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 37302662 - 37302729
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||| ||||||||| |||||||||||||||||| || ||||||||||||||||| |||||||    
T  37302662 atttcctttgcaaaattttgattgtcacaaaagttgtcaaatgtatggatgttcaaataagacaactc 37302729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 55151672 - 55151605
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||  |||| ||||||||||||||||||||  ||||||||||||||||||||    
T  55151672 atttcctttgtaaaattttaattgtaacaaaagttgtcacatatataaatgttcaaataacacaactc 55151605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 28539695 - 28539629
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||||||||| |||||||||||| ||||||||||| |||  || |||||||||||||||||||||||    
T  28539695 attttctttgcaaaattttggttatcacaaaagttatcatctaaatggatgttcaaataacacaact 28539629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 20547945 - 20547901
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatata 60  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  20547945 atttcctttgtaaaattttggttgtcacaaaagttgtcacatata 20547901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 35201389 - 35201323
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||||||||||| ||||||  ||||| ||||||||||||  || |||||||||||||||||||||||    
T  35201389 attttctttgtataattttaattgtctcaaaagttgtcatttaaatggatgttcaaataacacaact 35201323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 41505627 - 41505664
Alignment:
Q  48 gttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41505627 gttgtcacatatatggatgttcaaataacacaactcaa 41505664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 42478086 - 42478142
Alignment:
Q  29 aattttggttgtcacaaaagttgtcacatat--atggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||    
T  42478086 aattttggttgtcacaaaagttatcatatatatatggatgttcaaataacacaactc 42478142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 11630705 - 11630642
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 79  Q
    |||||||||||||||||||  ||||| ||||| |||||| ||| ||| ||||||||||||||||    
T  11630705 attttctttgtaaaattttaattgtctcaaaaattgtcatataaatgaatgttcaaataacaca 11630642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 42889101 - 42889168
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||||||| |  ||||||||||||  || || |||||| ||||||||||||||    
T  42889101 attttctttgtaaaattttggttatatcaaaagttgtcatctaaatagatgtttaaataacacaactc 42889168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 45711394 - 45711355
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcac 55  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  45711394 attttctttgtaaaattttggttgttacaaaagttgtcac 45711355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 51982215 - 51982282
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| ||||||||| |||||| ||||| |||| | ||| |||||| |||||||||||||||||    
T  51982215 attttctttataaaattttagttgtctcaaaaattgttatataaatggattttcaaataacacaactc 51982282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 42997401 - 42997470
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    ||||||||| || |||||||||||||  ||||||||||| ||| ||| ||||| |||||||||| |||||    
T  42997401 attttctttatacaattttggttgtcttaaaagttgtcatataaatgaatgtttaaataacacagctcaa 42997470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 44463473 - 44463538
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaac 81  Q
    |||||||||||||||||||| || || |||||||| ||| |||  | |||||||||||||||||||    
T  44463473 attttctttgtaaaattttgattatctcaaaagttatcatataatttgatgttcaaataacacaac 44463538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 14226660 - 14226593
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||| |||||  |||| |||| |||||  ||  |||||||||||||||||||    
T  14226660 attttctttgtaaaattttgattgtcttaaaaattgttacataattgattgttcaaataacacaactc 14226593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 27511842 - 27511903
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 79  Q
    ||||||||||||| || |||||||| |||||||||||||| | || | |||||||||||||||    
T  27511842 ttttctttgtaaatttatggttgtc-caaaagttgtcacacaaattgttgttcaaataacaca 27511903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 23770682 - 23770637
Alignment:
Q  34 tggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 79  Q
    ||||||||||||||||||||||  | |||| |||||||||||||||    
T  23770682 tggttgtcacaaaagttgtcactcaaatggttgttcaaataacaca 23770637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 24095359 - 24095299
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacac 78  Q
    ||||||||||||| || ||||||||| |||||||||||   | |||||||||||||||||||    
T  24095359 ttttctttgtaaa-ttatggttgtcataaaagttgtcaaccaaatggatgttcaaataacac 24095299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 46966053 - 46965992
Alignment:
Q  18 tttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 79  Q
    |||||||||||| || || |||||  ||||||||||||| | |||| |||||||||||||||    
T  46966053 tttctttgtaaatttatgattgtccgaaaagttgtcacacaaatggttgttcaaataacaca 46965992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 50559166 - 50559101
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||||||| |||| || ||||||||| |||| || ||||||| || | ||||||||||||||||||    
T  50559166 ttttctttataaatttatggttgtcataaaaattatcacataaatagttgttcaaataacacaact 50559101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 9719403 - 9719335
Alignment:
Q  17 ttttcttt-gtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||||||| |||||||| ||||| || ||||||||||||   | |||| ||||||||||||||||||||    
T  9719403 ttttctttagtaaaattatggttatcccaaaagttgtcaatcaaatggttgttcaaataacacaactca 9719335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 39630573 - 39630505
Alignment:
Q  15 aattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||||| |||||  |||| || | | ||| || ||||||||||||||| |||||    
T  39630573 aattttctttgtaaaattttgattgtcttaaaaattattatataaatagatgttcaaataacaaaactc 39630505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 50318324 - 50318280
Alignment:
Q  48 gttgtcacatatatggatgttcaaataacacaactcaatgtttta 92  Q
    |||||||||| ||||||||||||| |||||||| ||||| |||||    
T  50318324 gttgtcacatgtatggatgttcaagtaacacaagtcaatatttta 50318280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 6e-28; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 18254164 - 18254097
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18254164 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 18254097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 2076685 - 2076752
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  2076685 attttctttgtaaaattttggttgtcacaaaagttgtcacatctattgatgttcaaataacacaactc 2076752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 22888772 - 22888705
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22888772 atttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 22888705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 6049300 - 6049231
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6049300 atttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaattcaa 6049231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 21611604 - 21611543
Alignment:
Q  22 tttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21611604 tttgtaaaattttggttgtcataaaagttgtcacatatatggatgttcaaataacacaactc 21611543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 32477448 - 32477515
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32477448 atttcctttgtcaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 32477515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 37737926 - 37737859
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37737926 atttcctttgtaaagttttggttgtcacaaaagttgtcacatatatggacgttcaaataacacaactc 37737859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 41195700 - 41195767
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  41195700 atttcctttgtaaaattttggttgtcacaaaagttgttacatatatgaatgttcaaataacacaactc 41195767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 42421853 - 42421786
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42421853 atttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 42421786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 43487495 - 43487562
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  43487495 atttcctttgtaaaattttggttgttacaaaaattgtcacatatatggatgttcaaataacacaactc 43487562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 9760145 - 9760201
Alignment:
Q  27 aaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9760145 aaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaactc 9760201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 1248802 - 1248869
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||    
T  1248802 atttcctttgtaaaattttaattatcacaaaagttgtcacatatatggatgttcaaataacacaactc 1248869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 3097816 - 3097749
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  3097816 attttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 3097749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 9647248 - 9647315
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  9647248 atttcctttgtaaaattttggttgtcacaaaagttatcgcatatatgaatgttcaaataacacaactc 9647315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 9990807 - 9990874
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  9990807 atttcctttgtaaaattttaattgtcacaaaagttatcacatatatggatgttcaaataacacaactc 9990874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 9207706 - 9207772
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||| ||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||    
T  9207706 atttcctttgtaaaattttggttgtcacaaaaattatcacatatatagatgttcaaataacacaact 9207772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 41056702 - 41056636
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||    
T  41056702 attttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 41056636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 3838835 - 3838766
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||| ||||||||||||||  || |||||||||||||||||||||| |||||||||||||||||||||||    
T  3838835 atttcctttgtaaaattttaattatcacaaaagttgtcacatatatagatgttcaaataacacaactcaa 3838766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 9194363 - 9194424
Alignment:
Q  22 tttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||    
T  9194363 tttgtaaaattttggttgtcacaaaaattgttacatatatgaatgttcaaataacacaactc 9194424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 13333125 - 13333058
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| || |||||||||||||||||||||    
T  13333125 attttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaactc 13333058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 25270537 - 25270470
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||| |||||||||||||||| | |||||||||| ||| ||||||||||||||||||||||||    
T  25270537 attttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaataacacaactc 25270470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 27490685 - 27490618
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||| ||||||||||||||||||   | ||||||||||||||||||||||||    
T  27490685 attttctttgtaaaattttgattgtcacaaaagttgtcatcaaaatggatgttcaaataacacaactc 27490618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 41042370 - 41042437
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||    
T  41042370 atttcctttataaaattttggttgtcataaaaattgtcacatatatggatgttcaaataacagaactc 41042437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 34945039 - 34944979
Alignment:
Q  22 tttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||||||||||||||||||||| |||||||||||||||||| || ||||| ||||||||||    
T  34945039 tttgtaaaattttggttgtcacgaaagttgtcacatatatgaatattcaattaacacaact 34944979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 29349622 - 29349688
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||||||||||||||||||| ||||||||||||||||||  || ||||||||| |||||||| ||||    
T  29349622 attttctttgtaaaattttgattgtcacaaaagttgtcatctaaatggatgttgaaataacataact 29349688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 42091454 - 42091393
Alignment:
Q  21 ctttgtaaaattttggttgtcacaaaagttgtcacat--atatggatgttcaaataacacaa 80  Q
    ||||||||||||||||||||||||||| |||||||||  |||| ||||||||||||||||||    
T  42091454 ctttgtaaaattttggttgtcacaaaaattgtcacatatatatagatgttcaaataacacaa 42091393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 14255420 - 14255488
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    ||||||||||||| || |||||||| ||||||||||| |||| |||| ||||||||||||||| |||||    
T  14255420 ttttctttgtaaatttatggttgtcccaaaagttgtcgcataaatggttgttcaaataacacacctcaa 14255488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 7698286 - 7698356
Alignment:
Q  15 aattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    ||||| ||||||||||||||  || ||||||||||| |||||| ||| ||||||| |||||||||||||||    
T  7698286 aatttcctttgtaaaattttaattatcacaaaagttatcacatgtatagatgttctaataacacaactcaa 7698356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 19633398 - 19633466
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtc-acatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||| |||||||||||||| || ||||||||  |||||||||||| |||||||    
T  19633398 atttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactc 19633466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 19830299 - 19830367
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtc-acatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||| |||||||||||||| || ||||||||  |||||||||||| |||||||    
T  19830299 atttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactc 19830367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 8848652 - 8848585
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||| ||||||||| ||||||||||| || |||  || || |||||||||||||||||||||    
T  8848652 attttctttgcaaaattttgattgtcacaaaaattatcatctaaatagatgttcaaataacacaactc 8848585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 22416349 - 22416384
Alignment:
Q  48 gttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||||||||||||||||||||    
T  22416349 gttgtcacatatatggatgttcaaataacacaactc 22416384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 28494975 - 28495042
Alignment:
Q  15 aattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    |||||||| |||||| || ||||||||||||||||||| |  || |||| ||||||||||||||||||    
T  28494975 aattttctgtgtaaatttatggttgtcacaaaagttgtaatttaaatggttgttcaaataacacaact 28495042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 44050131 - 44050194
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 79  Q
    |||||||||||||| || |||||||| ||||||||||| || | |||| |||||||||||||||    
T  44050131 attttctttgtaaatttatggttgtctcaaaagttgtcgcacaaatggttgttcaaataacaca 44050194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 31296655 - 31296717
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 79  Q
    ||||||||||||| || ||||||||| |||||||||||||   |||| |||||||||||||||    
T  31296655 ttttctttgtaaatttatggttgtcataaaagttgtcacactaatggttgttcaaataacaca 31296717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 42430767 - 42430828
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacac 78  Q
    ||||||||||||| || |||||||  |||||||||||||| | |||| ||||||||||||||    
T  42430767 ttttctttgtaaacttatggttgttccaaaagttgtcacacaaatggttgttcaaataacac 42430828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 17388537 - 17388501
Alignment:
Q  49 ttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    ||||||||||||| |||||||||||||||||||||||    
T  17388537 ttgtcacatatatagatgttcaaataacacaactcaa 17388501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 42434247 - 42434303
Alignment:
Q  28 aaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||||||| | ||| |||||||||||| ||| || ||||||||||||||||||||||    
T  42434247 aaattttgatcgtctcaaaagttgtcatataaatagatgttcaaataacacaactca 42434303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 136049 - 136107
Alignment:
Q  22 tttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||| |||||| |||||||   || ||| ||||||||||||||||||||||||    
T  136049 tttgtaaaattttagttgtctcaaaagt---catataaatggatgttcaaataacacaactc 136107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 1352505 - 1352572
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||| |||||  |||| ||||| | ||| |  |||||||||||||||||||||    
T  1352505 attttctttgtaaaattttagttgttgcaaaggttgttatataaaatgatgttcaaataacacaactc 1352572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 18846727 - 18846794
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||| |||| ||||||||| |||||| |||| ||||||  || |||||||||||||||||| |||||    
T  18846727 attttttttgcaaaattttgattgtcataaaaattgtcatctaaatggatgttcaaataacataactc 18846794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 19109028 - 19108993
Alignment:
Q  36 gttgtcacaaaagttgtcacatatatggatgttcaa 71  Q
    ||||||||||||||||||||||||||| ||||||||    
T  19109028 gttgtcacaaaagttgtcacatatatgaatgttcaa 19108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 32701207 - 32701274
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| |||||||| || |||||| | |||||||| ||| ||| |||| ||||||||||||||||||||    
T  32701207 ttttttttgtaaacttatggttgccccaaaagttatcatataaatggttgttcaaataacacaactca 32701274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 1907717 - 1907651
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||| || ||||||||| | |||||||||  || |||  |||||||||||||||||||    
T  1907717 ttttctttgtaaatttatggttgtcatacaagttgtcatctaaatgattgttcaaataacacaactc 1907651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 3412508 - 3412446
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 79  Q
    ||||||||||||| || |||||||  |||||||||||||||| || | |||||||| ||||||    
T  3412508 ttttctttgtaaatttatggttgtttcaaaagttgtcacataaatagttgttcaaacaacaca 3412446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 7664020 - 7663955
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||| || ||||||||| |||| ||||||| || |||  |||||||||||||||||||    
T  7664020 ttttctttgtaaatttatggttgtcataaaa-ttgtcacctaaatgattgttcaaataacacaactc 7663955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 44219367 - 44219408
Alignment:
Q  44 aaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    ||||||||||| ||| |||||||||||||| |||||||||||    
T  44219367 aaaagttgtcatataaatggatgttcaaatgacacaactcaa 44219408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 9521925 - 9521993
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    ||||||||||||| || |||||||| |||||||| ||||| | ||  || ||||||||||||| |||||    
T  9521925 ttttctttgtaaatttatggttgtctcaaaagttatcacacaaataaatattcaaataacacacctcaa 9521993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 22416329 - 22416357
Alignment:
Q  16 attttctttgtaaaattttggttgtcaca 44  Q
    |||||||||||||||||||||||||||||    
T  22416329 attttctttgtaaaattttggttgtcaca 22416357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 9e-27; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 22719556 - 22719625
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  22719556 attttctttgtaaaattttggttatcacaaaagttgtcacatatatggctgttcaaataacacaactcaa 22719625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 12898884 - 12898817
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12898884 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacataactc 12898817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 42768320 - 42768389
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||| |||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  42768320 atttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacacaactcaa 42768389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 32501151 - 32501087
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    |||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  32501151 atttcctttgtaaaattttggttgtcacaaaaattctcacatatatggatgttcaaataacacaa 32501087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 27325874 - 27325941
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||    
T  27325874 atttcctttgtaaaattttgattatcacgaaagttgtcacatatatggatgttcaaataacacaactc 27325941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 29025376 - 29025443
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||||||||||||    
T  29025376 attttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgtttaaataacacaactc 29025443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 34186723 - 34186790
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  34186723 atttcctttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcaaataacacaactc 34186790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 37133817 - 37133750
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||    
T  37133817 attttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttaaaataacacaactc 37133750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 43397897 - 43397960
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 79  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  43397897 attttctttgtaaaattttggttgtcacaaaagctgtcacatgtatggatgttcaattaacaca 43397960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 36660405 - 36660339
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    ||||||||| |||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||    
T  36660405 attttctttataaaattttgattgtcacaaaagttatcacatttatggatgttcaaataacacaact 36660339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 11253497 - 11253421
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaatgtttta 92  Q
    |||||||||||||||||||||| |||||||||||||||| || ||| ||||||||||||| ||||||| || |||||    
T  11253497 attttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactctatatttta 11253421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 36816571 - 36816507
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaa 80  Q
    |||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||||||||||    
T  36816571 attttctttgcaaaattttgattatcacaaaagttgtcacatatatagatgttcaaataacacaa 36816507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 37449380 - 37449313
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| ||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||||||    
T  37449380 atttcctttgtaaaattttgattatcacaaaagttatcacatatatggatattcaaataacacaactc 37449313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 4054235 - 4054173
Alignment:
Q  22 tttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||||||| ||||| |||||||||||||||||||||||||  |||||||||||||||||||||    
T  4054235 tttgtaaagttttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaactca 4054173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 7271972 - 7272034
Alignment:
Q  22 tttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||    
T  7271972 tttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcatataacacaactca 7272034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 36251442 - 36251503
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataaca 77  Q
    |||| ||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  36251442 atttcctttgtaaaattttgattgtcacgaaagttatcacatatatggatgttcaaataaca 36251503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 24479339 - 24479406
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||| ||||||||||||||| ||| ||||||| ||| ||||||||||||||||    
T  24479339 atttcctttgtaaaattttagttgtcacaaaagttatcatatatatgaatgctcaaataacacaactc 24479406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 10692552 - 10692614
Alignment:
Q  21 ctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||| |||||| | |||||| ||||||||||||||||||||||| |||||||    
T  10692552 ctttgtaaaattttgattgtcagagaagttgacacatatatggatgttcaaataatacaactc 10692614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 5277454 - 5277393
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataaca 77  Q
    |||| ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||||    
T  5277454 atttcctttgtaaaattttgattgtcacataaattgtcacatgtatggatgttcaaataaca 5277393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 13106597 - 13106663
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||| || ||||||| | |||||||||||| || |||| |||||||||||||||||||    
T  13106597 ttttctttgtaaatttatggttgttataaaagttgtcacctaaatggttgttcaaataacacaactc 13106663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 32133439 - 32133505
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaact 82  Q
    ||||| ||||||||||||||||| || ||||| || ||| ||| |||||||||||||||||||||||    
T  32133439 attttatttgtaaaattttggttatctcaaaatttatcatataaatggatgttcaaataacacaact 32133505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 23754661 - 23754592
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||||||||||||||||||||||||  |||| ||||||| ||| |   ||||||||||||||||||||||    
T  23754661 attttctttgtaaaattttggttgttgcaaaggttgtcatataaaataatgttcaaataacacaactcaa 23754592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 36969627 - 36969562
Alignment:
Q  18 tttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||| | |||||||| || ||||||||| | | ||||||||||||||||||||||||    
T  36969627 tttctttgtaaaaatatggttgtcgcataagttgtcaaacaaatggatgttcaaataacacaactc 36969562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 10839438 - 10839370
Alignment:
Q  15 aattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||||||||| |||||| ||||| || ||| | | ||||||||||||||||||| ||||    
T  10839438 aattttctttgtaaaattttagttgtctcaaaaattatcataaaaatggatgttcaaataacactactc 10839370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 31249459 - 31249424
Alignment:
Q  48 gttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||||||||||||||||||||||    
T  31249459 gttgtcacatatatggatgttcaaataacacaactc 31249424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 7598836 - 7598893
Alignment:
Q  28 aaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||||||||||||| |||||||| ||| |||  || ||||||||||||||||||||||    
T  7598836 aaattttggttgtctcaaaagttttcatataattgaatgttcaaataacacaactcaa 7598893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 5740739 - 5740671
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaa 85  Q
    |||||||||||||||| ||||||||  ||||||||||    | |||| |||||||||||||||||||||    
T  5740739 ttttctttgtaaaattatggttgtcctaaaagttgtctataaaatggctgttcaaataacacaactcaa 5740671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 21526234 - 21526167
Alignment:
Q  17 ttttctttgtaaaattttggttgtcacaaaagttgtcacat-atatggatgttcaaataacacaactc 83  Q
    |||||||||| ||||| |||||||| |||||||||||| || | |||| |||| ||||||||||||||    
T  21526234 ttttctttgtgaaattatggttgtcccaaaagttgtcaaatcaaatggttgtttaaataacacaactc 21526167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 3381525 - 3381458
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    ||||||||||||||| |||||||||  ||| |||||||| ||| |||||||||| ||||| | ||||||    
T  3381525 attttctttgtaaaa-tttggttgtatcaagagttgtcatataaatggatgttctaataatataactca 3381458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 76574 - 76507
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  76574 atttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttaaaataacacaactc 76507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 49411 - 49479
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  49411 atttcctttgtaaaattttggttatcacaaaagttgtcacatatatggatgttcaaataacataactca 49479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 8784 - 8851
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  8784 atttcctttgtaaaattttggttgtcataaaagttgtcagatatatggatgttcaaataacacaactc 8851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 11898 - 11974
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcaatgtttta 92  Q
    |||||||||||||||||||||| |||||||||||||||| || ||| ||||||||||||| ||||||| || |||||    
T  11898 attttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactctatatttta 11974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 20857 - 20789
Alignment:
Q  15 aattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||| ||| ||||||||| || |||||||| || |||  || ||||||||||||||||||||||||    
T  20857 aattttccttgcaaaattttgattatcacaaaaattatcatttaaatggatgttcaaataacacaactc 20789  T

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Target: scaffold0184 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 16743 - 16677
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||| | ||| |||||  ||||||||||| ||| |||||||||||||||||| |||||    
T  16743 attttctttgtaaa-tgttgattgtcttaaaagttgtcatataaatggatgttcaaataacagaactc 16677  T

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Target: scaffold0078 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 56101 - 56167
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 83  Q
    |||||||||||||| | ||| |||||  ||||||||||| ||| |||||||||||||||||| |||||    
T  56101 attttctttgtaaa-tgttgattgtcttaaaagttgtcatataaatggatgttcaaataacagaactc 56167  T

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Target: scaffold0067 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 35660 - 35694
Alignment:
Q  49 ttgtcacatatatggatgttcaaataacacaactc 83  Q
    ||||||||||||||||| |||||||||||||||||    
T  35660 ttgtcacatatatggatattcaaataacacaactc 35694  T

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Target: scaffold0087 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 53316 - 53248
Alignment:
Q  16 attttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactca 84  Q
    ||||||||| |||| |||||||||||  |||| || ||| ||| ||  |||||||||||||||||||||    
T  53316 attttctttataaatttttggttgtctaaaaacttatcatataaataaatgttcaaataacacaactca 53248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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