View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10798_low_21 (Length: 263)

Name: NF10798_low_21
Description: NF10798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10798_low_21
NF10798_low_21
[»] chr7 (26 HSPs)
chr7 (65-244)||(229478-229658)
chr7 (1-62)||(30002563-30002624)
chr7 (1-62)||(30469443-30469503)
chr7 (1-62)||(30471011-30471071)
chr7 (1-62)||(32021212-32021272)
chr7 (1-62)||(32022667-32022728)
chr7 (1-62)||(36784519-36784580)
chr7 (1-62)||(37706327-37706387)
chr7 (1-62)||(42489977-42490038)
chr7 (1-49)||(30468695-30468743)
chr7 (2-62)||(36783749-36783808)
chr7 (1-47)||(24306353-24306399)
chr7 (1-47)||(24307112-24307158)
chr7 (1-62)||(30001793-30001853)
chr7 (1-43)||(42489222-42489264)
chr7 (1-62)||(30659844-30659905)
chr7 (1-62)||(43334119-43334180)
chr7 (22-62)||(21415421-21415461)
chr7 (1-63)||(38059835-38059897)
chr7 (22-60)||(46428145-46428183)
chr7 (1-62)||(3162858-3162919)
chr7 (1-62)||(3163503-3163563)
chr7 (1-62)||(8513469-8513530)
chr7 (1-62)||(31179924-31179985)
chr7 (22-62)||(3219294-3219333)
chr7 (1-37)||(30470127-30470163)
[»] chr5 (21 HSPs)
chr5 (1-62)||(15883155-15883216)
chr5 (1-62)||(3259813-3259873)
chr5 (2-62)||(36038591-36038651)
chr5 (1-62)||(4737808-4737870)
chr5 (1-62)||(492141-492201)
chr5 (1-62)||(3259062-3259122)
chr5 (1-62)||(14480738-14480799)
chr5 (1-62)||(14481465-14481525)
chr5 (8-51)||(9918495-9918538)
chr5 (1-47)||(9917733-9917779)
chr5 (1-51)||(12281107-12281157)
chr5 (1-47)||(15915820-15915866)
chr5 (1-51)||(25836615-25836665)
chr5 (1-62)||(4737034-4737095)
chr5 (1-44)||(25835861-25835904)
chr5 (1-47)||(10394869-10394915)
chr5 (1-51)||(15915084-15915134)
chr5 (1-44)||(10394112-10394155)
chr5 (1-62)||(23206200-23206261)
chr5 (1-62)||(490903-490965)
chr5 (22-62)||(11768830-11768870)
[»] chr4 (18 HSPs)
chr4 (1-62)||(19549451-19549512)
chr4 (1-62)||(6784830-6784891)
chr4 (1-62)||(12835181-12835241)
chr4 (1-62)||(25478066-25478126)
chr4 (8-62)||(25236377-25236431)
chr4 (1-47)||(36854913-36854959)
chr4 (1-51)||(50696931-50696981)
chr4 (1-62)||(36855671-36855731)
chr4 (1-62)||(42418974-42419035)
chr4 (1-62)||(42419715-42419775)
chr4 (2-62)||(12834408-12834468)
chr4 (8-51)||(18032757-18032800)
chr4 (1-47)||(19550231-19550277)
chr4 (1-62)||(25478803-25478864)
chr4 (1-62)||(45919500-45919561)
chr4 (22-62)||(550346-550386)
chr4 (8-52)||(50696183-50696227)
chr4 (22-62)||(21825174-21825214)
[»] chr3 (19 HSPs)
chr3 (1-62)||(46889271-46889332)
chr3 (1-62)||(16303394-16303455)
chr3 (1-62)||(46915731-46915791)
chr3 (2-62)||(16302623-16302682)
chr3 (1-61)||(46914962-46915021)
chr3 (1-47)||(37987177-37987223)
chr3 (1-47)||(46888480-46888526)
chr3 (8-62)||(50801822-50801876)
chr3 (8-62)||(50874004-50874058)
chr3 (1-61)||(50802594-50802653)
chr3 (1-61)||(50873224-50873283)
chr3 (1-44)||(37986421-37986464)
chr3 (1-47)||(13644126-13644172)
chr3 (1-47)||(16854648-16854694)
chr3 (1-60)||(53948651-53948710)
chr3 (1-62)||(20200614-20200675)
chr3 (1-62)||(20202798-20202859)
chr3 (1-62)||(53950083-53950144)
chr3 (1-62)||(54584885-54584945)
[»] chr2 (21 HSPs)
chr2 (1-62)||(34452239-34452300)
chr2 (2-62)||(37876155-37876215)
chr2 (8-62)||(19911139-19911193)
chr2 (1-62)||(863967-864028)
chr2 (1-62)||(8043805-8043866)
chr2 (1-62)||(36151102-36151163)
chr2 (8-62)||(2055093-2055147)
chr2 (1-62)||(863196-863256)
chr2 (1-62)||(24433373-24433434)
chr2 (1-62)||(38985979-38986040)
chr2 (2-62)||(34453012-34453071)
chr2 (1-49)||(36150338-36150386)
chr2 (8-51)||(37875391-37875434)
chr2 (8-62)||(2054345-2054398)
chr2 (8-62)||(2868668-2868721)
chr2 (1-62)||(24429608-24429668)
chr2 (1-62)||(27059166-27059226)
chr2 (1-62)||(27060018-27060079)
chr2 (1-62)||(8911842-8911903)
chr2 (1-62)||(42849504-42849565)
chr2 (22-62)||(20203327-20203367)
[»] chr1 (24 HSPs)
chr1 (1-62)||(48644836-48644897)
chr1 (1-62)||(39870052-39870113)
chr1 (1-51)||(23174045-23174095)
chr1 (1-62)||(4595581-4595642)
chr1 (1-62)||(31150667-31150728)
chr1 (1-62)||(48577561-48577621)
chr1 (1-50)||(51661362-51661411)
chr1 (1-48)||(23601739-23601786)
chr1 (1-47)||(40959777-40959823)
chr1 (2-47)||(4594710-4594755)
chr1 (22-62)||(23602465-23602505)
chr1 (1-47)||(24081458-24081504)
chr1 (1-47)||(31151439-31151485)
chr1 (1-47)||(40958891-40958937)
chr1 (22-62)||(5216550-5216590)
chr1 (22-62)||(14886141-14886181)
chr1 (8-47)||(23173288-23173327)
chr1 (1-52)||(24082202-24082253)
chr1 (1-44)||(39870816-39870859)
chr1 (1-63)||(21791487-21791548)
chr1 (1-62)||(51660592-51660654)
chr1 (1-62)||(21790739-21790800)
chr1 (22-62)||(5496534-5496574)
chr1 (22-62)||(17606252-17606292)
[»] chr8 (17 HSPs)
chr8 (1-62)||(3583647-3583708)
chr8 (1-62)||(24023027-24023087)
chr8 (8-62)||(20054258-20054312)
chr8 (1-62)||(3583296-3583357)
chr8 (1-62)||(16847678-16847738)
chr8 (1-62)||(29267934-29267994)
chr8 (1-50)||(41272966-41273015)
chr8 (1-61)||(34654192-34654252)
chr8 (1-48)||(41273790-41273837)
chr8 (1-47)||(16846817-16846863)
chr8 (1-62)||(29268820-29268881)
chr8 (1-62)||(3582422-3582482)
chr8 (1-62)||(14754163-14754222)
chr8 (12-62)||(20054999-20055048)
chr8 (1-62)||(10092908-10092969)
chr8 (22-62)||(5881132-5881172)
chr8 (22-62)||(34654945-34654984)
[»] chr6 (12 HSPs)
chr6 (1-62)||(18969100-18969161)
chr6 (1-52)||(34713363-34713414)
chr6 (1-62)||(1370149-1370209)
chr6 (1-62)||(1371058-1371119)
chr6 (1-48)||(24063783-24063830)
chr6 (8-62)||(18969862-18969915)
chr6 (1-41)||(5114213-5114253)
chr6 (22-62)||(8992896-8992936)
chr6 (22-62)||(9017343-9017383)
chr6 (1-61)||(18649904-18649964)
chr6 (1-43)||(10788988-10789030)
chr6 (1-47)||(32907431-32907477)
[»] scaffold0093 (2 HSPs)
scaffold0093 (1-62)||(21944-22005)
scaffold0093 (2-47)||(22774-22819)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-62)||(8401-8461)
[»] scaffold1339 (1 HSPs)
scaffold1339 (1-62)||(1906-1966)


Alignment Details
Target: chr7 (Bit Score: 129; Significance: 7e-67; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 65 - 244
Target Start/End: Original strand, 229478 - 229658
Alignment:
Q  65 ctcagagataggagacatattgctcatcatgtttcttcctcaatttcgagcagtgtcaaaagtgaatataccacaattcttgagaattccacatttttgt 164  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| |||||||||||||| |||||    
T  229478 ctcagatataggagacatattgttcatcatgtttcttcctcaatttggagcaatgtcaaaagtgaatataccacatttcatgagaattccacatgtttgt 229577  T
Q  165 taggaaatggggaaaatatcaagttctagactgatagctggtgtggacct-cccctttgtgaggtgtttcatattccccct 244  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||    
T  229578 taggaaatggggaaaatatcaagttctggactgatagttggtgtgggcctccccctttgtgaggtgtttcatattcgccct 229658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30002563 - 30002624
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||    
T  30002563 gatttgatgtcaaactaattttgacaccatggtgtcatttgatcctaactatatatatatat 30002624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30469443 - 30469503
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  30469443 gatttgatgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 30469503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30471011 - 30471071
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  30471011 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 30471071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32021272 - 32021212
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  32021272 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 32021212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32022667 - 32022728
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| || ||| ||||||||||    
T  32022667 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcatatccctatatatatat 32022728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36784519 - 36784580
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||||| ||| ||||||||||    
T  36784519 gatttggtgtcaaactaattttgacaccatggtatcatttgatcctatccctatatatatat 36784580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37706327 - 37706387
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||    
T  37706327 gatttggtgtcaaactaattttgacaccatagtgtcatttgatcctaa-cccatatatatat 37706387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42489977 - 42490038
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||| | ||||||||    
T  42489977 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctagatatatat 42490038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30468743 - 30468695
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaac 49  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  30468743 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaac 30468695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 36783808 - 36783749
Alignment:
Q  2 atttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||| |||||||||||||    
T  36783808 atttggtgtcaaactaattttgacaccatggtatcatttgatcctaa-cccatatatatat 36783749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24306399 - 24306353
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  24306399 gatttggtgtcaaactaattttgacaccatggtgtcatttgatccta 24306353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24307112 - 24307158
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  24307112 gatttgatgtcaaactaattttgacatcatggtgtcatttgatccta 24307158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30001853 - 30001793
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||| | |||||||||||||    
T  30001853 gatttggtgtcaaactaattttgacaccatagtgtcatttgatcct-atcccatatatatat 30001793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42489264 - 42489222
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgat 43  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  42489264 gatttggtgtcaaactaattttgacaccatggtgtcatttgat 42489222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30659905 - 30659844
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||| | | | |||||||||||||||||||||||||| ||| ||||||||||    
T  30659905 gatttggtgtcaaatttaatttgacaccatggtgtcatttgatcctatccctatatatatat 30659844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43334180 - 43334119
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||||| | | ||||||| |||||||||||||||||| ||  ||||||||||    
T  43334180 gatttgatgtcaaacttaatttgacaccttggtgtcatttgatcctatccatatatatatat 43334119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 21415421 - 21415461
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||| |||||||||||||||||||||| ||||||||||    
T  21415421 tgacaccttggtgtcatttgatcctaaccctatatatatat 21415461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38059897 - 38059835
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatatt 63  Q
    |||||| ||||||| | | | ||||||| |||||||||||||||||| ||| |||||||||||    
T  38059897 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatatt 38059835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 46428145 - 46428183
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatat 60  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  46428145 tgacaccatggtgtcatttgatcctatccctatatatat 46428183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3162919 - 3162858
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||| | | | ||||||| |||||||||||||||||| ||| ||||||||||    
T  3162919 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 3162858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3163503 - 3163563
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||| | | | ||||||||||||||||||||||||| | |||||||||||||    
T  3163503 gatttggtgtcaaatttaatttgacaccatggtgtcatttgatcct-atcccatatatatat 3163563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8513469 - 8513530
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||| | | | ||||||| |||||||||||||||||| ||| ||||||||||    
T  8513469 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 8513530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31179924 - 31179985
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||| | | | ||||||| |||||||||||||||||| ||| ||||||||||    
T  31179924 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 31179985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 3219333 - 3219294
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  3219333 tgacaccttggtgtcatttgatcctaa-cccatatatatat 3219294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30470163 - 30470127
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtca 37  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  30470163 gatttggtgtcaaactaattttgacaccatggtgtca 30470127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 15883216 - 15883155
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  15883216 gatttgatgtcaaactaattttgacaccatgatgtcatttgatcctaaccctatatatatat 15883155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3259813 - 3259873
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  3259813 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaa-cccatatatatat 3259873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 36038591 - 36038651
Alignment:
Q  2 atttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||  ||||||||||    
T  36038591 atttggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccatatatatatat 36038651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4737808 - 4737870
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaac-cccatatatatat 62  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||    
T  4737808 gatttggtgtcaaactaattttgacatcatggtgtcatttgatcctaacacccatatatatat 4737870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 492141 - 492201
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  492141 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 492201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3259122 - 3259062
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  3259122 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 3259062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14480799 - 14480738
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| || ||| ||||||||||    
T  14480799 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcatatccctatatatatat 14480738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14481465 - 14481525
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  14481465 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 14481525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 9918495 - 9918538
Alignment:
Q  8 tgtcaaactaattatgacaccatggtgtcatttgatcctaaccc 51  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  9918495 tgtcaaactaattttgacaccatggtgtcatttgatcctaaccc 9918538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9917779 - 9917733
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  9917779 gatttggtgtcaaactaattttgacaccatggtgtcatttgatccta 9917733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12281157 - 12281107
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccc 51  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||||||    
T  12281157 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcataaccc 12281107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15915820 - 15915866
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  15915820 gatttggtgtcaaactaattttgacaccatggtgtcatttgatccta 15915866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25836615 - 25836665
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccc 51  Q
    |||||| ||||||| ||||| ||||||||||||||||||||||||||||||    
T  25836615 gatttggtgtcaaaataattttgacaccatggtgtcatttgatcctaaccc 25836665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4737095 - 4737034
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||||| ||| ||||||||||||||||||||||| || ||  ||||||||||    
T  4737095 gatttgatgtcaaacttattttgacaccatggtgtcatttgatcttatccatatatatatat 4737034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25835904 - 25835861
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatc 44  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  25835904 gatttggtgtcaaactaattttgacaccatggtgtcatttgatc 25835861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10394869 - 10394915
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  10394869 gatttggtgtcaaactaattttgacaccatggtgtcattttatccta 10394915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15915134 - 15915084
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccc 51  Q
    |||||| ||||||| ||||| |||||||||| |||||||||||||||||||    
T  15915134 gatttggtgtcaaattaattttgacaccatgatgtcatttgatcctaaccc 15915084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10394155 - 10394112
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatc 44  Q
    |||||| ||||||| ||||| |||||||||||||||||||||||    
T  10394155 gatttggtgtcaaattaattttgacaccatggtgtcatttgatc 10394112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23206200 - 23206261
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||| | | | ||||||| |||||||||||||||||| ||| ||||||||||    
T  23206200 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 23206261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 490965 - 490903
Alignment:
Q  1 gatttgatgtcaaactaattatgacac--catggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||  ||||||||||||||||| | | |||||||||||||    
T  490965 gatttggtgtcaaactaattttgacacaccatggtgtcatttgatcat-atcccatatatatat 490903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 11768870 - 11768830
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||| ||||||||||||||| ||| ||||||||||    
T  11768870 tgacaccatgatgtcatttgatcctatccctatatatatat 11768830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19549512 - 19549451
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  19549512 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccctatatatatat 19549451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6784891 - 6784830
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  6784891 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatatatat 6784830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12835181 - 12835241
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  12835181 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaa-cccatatatatat 12835241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25478126 - 25478066
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  25478126 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaa-cccatatatatat 25478066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 25236431 - 25236377
Alignment:
Q  8 tgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  25236431 tgtcaaactaattttgacaccatgatgtcatttgatcctaaccctatatatatat 25236377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36854959 - 36854913
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  36854959 gatttgatgtcaaactaattttgacaccatggtgtcatttgatccta 36854913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50696931 - 50696981
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccc 51  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  50696931 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccc 50696981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36855671 - 36855731
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  36855671 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 36855731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42419035 - 42418974
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||    
T  42419035 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatgtatat 42418974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42419715 - 42419775
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  42419715 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 42419775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 12834468 - 12834408
Alignment:
Q  2 atttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||| ||| ||||||||||    
T  12834468 atttggtgtcaaactaattttgacaccatagtgtcatttgatcctatccctatatatatat 12834408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 18032800 - 18032757
Alignment:
Q  8 tgtcaaactaattatgacaccatggtgtcatttgatcctaaccc 51  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  18032800 tgtcaaactaattttgacaccatggtgtcatttgatcctaaccc 18032757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19550231 - 19550277
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  19550231 gatttggtgtcaaactaattttgacaccatggtgtcatttgatccta 19550277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25478803 - 25478864
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||| |||| | ||||||||||||||||| ||||||||||    
T  25478803 gatttggtgtcaaactaattttgacaacatgatatcatttgatcctaaccctatatatatat 25478864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 45919561 - 45919500
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||| | | | ||||||| |||||||||||||||||| ||| ||||||||||    
T  45919561 gatttgatgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 45919500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 550346 - 550386
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  550346 tgacaccatggtgtcatttgatcctatccctatatatatat 550386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 50696227 - 50696183
Alignment:
Q  8 tgtcaaactaattatgacaccatggtgtcatttgatcctaacccc 52  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||    
T  50696227 tgtcaaactaattttgacaccaaggtgtcatttgatcctatcccc 50696183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 21825174 - 21825214
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||||||||||||||| ||  ||||||||||    
T  21825174 tgacaccatggtgtcatttgatcctatccatatatatatat 21825214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 46889271 - 46889332
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  46889271 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccctatatatatat 46889332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16303394 - 16303455
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  16303394 gatttggtgtcaaactaattttgacaccatgatgtcatttgatcctaaccctatatatatat 16303455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 46915731 - 46915791
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  46915731 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 46915791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 16302682 - 16302623
Alignment:
Q  2 atttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  16302682 atttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 16302623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46915021 - 46914962
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatata 61  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  46915021 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatata 46914962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37987177 - 37987223
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  37987177 gatttggtgtcaaactaattttgacaccatggtgtcatttgatccta 37987223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 46888526 - 46888480
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  46888526 gatttggtgtcaaactaattttgacaccatggtgtcatttgatccta 46888480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 50801876 - 50801822
Alignment:
Q  8 tgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||||||||| ||||||||||||||||||||||| || ||| ||||||||||    
T  50801876 tgtcaaactaattttgacaccatggtgtcatttgatcatatccctatatatatat 50801822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 50874004 - 50874058
Alignment:
Q  8 tgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||||||||| ||||||||||||||||||||||| || ||| ||||||||||    
T  50874004 tgtcaaactaattttgacaccatggtgtcatttgatcatatccctatatatatat 50874058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50802594 - 50802653
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatata 61  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||| | ||||||||||||    
T  50802594 gatttggtgtcaaactaattttgacaccatggtgtcaattgatcct-atcccatatatata 50802653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 50873283 - 50873224
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatata 61  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||| | ||||||||||||    
T  50873283 gatttggtgtcaaactaattttgacaccatggtgtcaattgatcct-atcccatatatata 50873224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37986464 - 37986421
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatc 44  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  37986464 gatttggtgtcaaactaattttgacaccatggtgtcatttgatc 37986421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13644126 - 13644172
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||    
T  13644126 gatttggtgtcaaactaattttgacaccatggtatcatttgatccta 13644172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16854648 - 16854694
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||||    
T  16854648 gatttggtgtcaaactaattttgacaccatgatgtcatttgatccta 16854694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 53948710 - 53948651
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatat 60  Q
    |||||| ||||||| | | | |||||||||||||||||||||||||| ||| ||||||||    
T  53948710 gatttggtgtcaaatttaatttgacaccatggtgtcatttgatcctatccctatatatat 53948651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20200614 - 20200675
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||| | | | ||||||| |||||||||||||||||| ||| ||||||||||    
T  20200614 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 20200675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20202798 - 20202859
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||| | | | ||||||| |||||||||||||||||| ||| ||||||||||    
T  20202798 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 20202859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53950083 - 53950144
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||| | | | ||||||| |||||||||||||||||| ||| ||||||||||    
T  53950083 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 53950144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 54584885 - 54584945
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||| ||| | | | ||||||||||||||||||||||||| | |||||||||||||    
T  54584885 gatttgatgttaaatttagtttgacaccatggtgtcatttgatcct-atcccatatatatat 54584945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34452300 - 34452239
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  34452300 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccctatatatatat 34452239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 37876155 - 37876215
Alignment:
Q  2 atttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  37876155 atttggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccctatatatatat 37876215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 19911139 - 19911193
Alignment:
Q  8 tgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  19911139 tgtcaaactaattttgacaccatggtgtcatttgatcctaaccctatatatatat 19911193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 863967 - 864028
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  863967 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatatatat 864028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8043805 - 8043866
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  8043805 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatatatat 8043866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36151102 - 36151163
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  36151102 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaactctatatatatat 36151163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 2055093 - 2055147
Alignment:
Q  8 tgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  2055093 tgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatatatat 2055147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 863256 - 863196
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  863256 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 863196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24433373 - 24433434
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||    
T  24433373 gatttggtgtcaaactaattttgacatcatggtgtcatttgatcctatccctatatatatat 24433434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38986040 - 38985979
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||||| ||| ||||||||||    
T  38986040 gatttggtgtcaaactaattttgacaccatagtgtcatttgatcctatccctatatatatat 38985979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 34453012 - 34453071
Alignment:
Q  2 atttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  34453012 atttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 34453071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36150386 - 36150338
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaac 49  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  36150386 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaac 36150338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 37875434 - 37875391
Alignment:
Q  8 tgtcaaactaattatgacaccatggtgtcatttgatcctaaccc 51  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  37875434 tgtcaaactaattttgacaccatggtgtcatttgatcctaaccc 37875391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 2054398 - 2054345
Alignment:
Q  8 tgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  2054398 tgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 2054345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 2868668 - 2868721
Alignment:
Q  8 tgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  2868668 tgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 2868721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24429668 - 24429608
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||| |||||||||||||||||| | |||||||||||||    
T  24429668 gatttggtgtcaaactaattttgacacgatggtgtcatttgatcct-atcccatatatatat 24429608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27059226 - 27059166
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||| ||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  27059226 gatttggtgtgaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 27059166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27060018 - 27060079
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||| ||||| ||||||||||||| ||| ||||||||||    
T  27060018 gatttggtgtcaaactaattttgacactatggtatcatttgatcctatccctatatatatat 27060079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8911842 - 8911903
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||| | | | |||||||||||||||||||||||||| ||| ||||||||||    
T  8911842 gatttggtgtcaaatttaatttgacaccatggtgtcatttgatcctatccctatatatatat 8911903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42849504 - 42849565
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||| | | | ||||||| |||||||||||||||||| ||| ||||||||||    
T  42849504 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 42849565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 20203327 - 20203367
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  20203327 tgacaccatggtgtcatttgatcctatcccattatatatat 20203367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48644836 - 48644897
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  48644836 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccctatatatatat 48644897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39870113 - 39870052
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  39870113 gatttggtgtcaaactaattttgacaccatggcgtcatttgatcctaaccctatatatatat 39870052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23174045 - 23174095
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccc 51  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  23174045 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccc 23174095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4595581 - 4595642
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| |||  |||||||||    
T  4595581 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccattatatatat 4595642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31150728 - 31150667
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||||| ||| ||||||||||    
T  31150728 gatttggtgtcaaactaattttgacaccattgtgtcatttgatcctatccctatatatatat 31150667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48577561 - 48577621
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  48577561 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 48577621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 51661362 - 51661411
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaacc 50  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  51661362 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaacc 51661411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23601786 - 23601739
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaa 48  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  23601786 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaa 23601739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40959777 - 40959823
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  40959777 gatttggtgtcaaactaattttgacaccatggtgtcatttgatccta 40959823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 4594755 - 4594710
Alignment:
Q  2 atttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  4594755 atttggtgtcaaactaattttgacaccatggtgtcatttgatccta 4594710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 23602465 - 23602505
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  23602465 tgacaccatggtgtcatttgatcctaaccctatatatatat 23602505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24081504 - 24081458
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  24081504 gatttggtgtcaaattaattttgacaccatggtgtcatttgatccta 24081458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31151439 - 31151485
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  31151439 gatttggtgtcaaactaattttgataccatggtgtcatttgatccta 31151485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40958937 - 40958891
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||    
T  40958937 gatttggtgtcaaactaattttgacaccatggtatcatttgatccta 40958891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 5216590 - 5216550
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  5216590 tgacaccatggtgtcatttgatcctatccctatatatatat 5216550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 14886181 - 14886141
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  14886181 tgacaccatggtgtcatttgatcctatccctatatatatat 14886141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 23173327 - 23173288
Alignment:
Q  8 tgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  23173327 tgtcaaactaattttgacaccatgatgtcatttgatccta 23173288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24082202 - 24082253
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaacccc 52  Q
    |||||| ||||||||||||| ||| |||||| ||||||||||||||| ||||    
T  24082202 gatttggtgtcaaactaattttgataccatgatgtcatttgatcctatcccc 24082253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39870816 - 39870859
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatc 44  Q
    |||||| ||||||||||| | |||||||||||||||||||||||    
T  39870816 gatttggtgtcaaactaaatttgacaccatggtgtcatttgatc 39870859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 21791487 - 21791548
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatatt 63  Q
    |||||| ||||||| | | | ||||||||||||||||||||||||| | ||||||||||||||    
T  21791487 gatttggtgtcaaatttaatttgacaccatggtgtcatttgatcct-atcccatatatatatt 21791548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 51660654 - 51660592
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatg-gtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| || |||||||||| |||||||||| |||||||||||||||| ||  ||||||||||    
T  51660654 gatttggtgacaaactaattttgacaccatgtgtgtcatttgatcctatccatatatatatat 51660592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21790800 - 21790739
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||| | | | ||||||| |||||||||||||||||| ||| ||||||||||    
T  21790800 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 21790739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 5496574 - 5496534
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||| |||||||||||||||||| ||| ||||||||||    
T  5496574 tgacaccttggtgtcatttgatcctatccctatatatatat 5496534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 17606292 - 17606252
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||| |||||||||||||||||| ||| ||||||||||    
T  17606292 tgacaccttggtgtcatttgatcctatccctatatatatat 17606252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3583647 - 3583708
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  3583647 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatatatat 3583708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24023027 - 24023087
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  24023027 gatttgttgtcaaactaattttgacaccatggtgtcatttgatcctaa-cccatatatatat 24023087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 20054312 - 20054258
Alignment:
Q  8 tgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  20054312 tgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatatatat 20054258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3583296 - 3583357
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||| ||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  3583296 gatttggtgtcaaattaattttgacaccatggtgtcatttgatcctatccctatatatatat 3583357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16847678 - 16847738
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  16847678 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 16847738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29267994 - 29267934
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  29267994 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 29267934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41273015 - 41272966
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaacc 50  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  41273015 gatttgatgtcaaactaattttaacaccatggtgtcatttgatcctaacc 41272966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34654252 - 34654192
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatata 61  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||  |||||||||    
T  34654252 gatttgctgtcaaactaattttgacaccatggtgtcatttgatcctatccttatatatata 34654192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41273790 - 41273837
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaa 48  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  41273790 gatttaatgtcaaactaattttgacaccatggtgtcatttgatcctaa 41273837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 16846863 - 16846817
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  16846863 gatttggtgtcaaactaattttgacaccatggtgtcatttgatccta 16846817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29268820 - 29268881
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| || | | ||||||||||    
T  29268820 gatttgatgtcaaattaattttgacaccatggtgtcatttgatcatatctctatatatatat 29268881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3582482 - 3582422
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||| |||||||||||| | | |||||||||||||    
T  3582482 gatttggtgtcaaactaattttgacaccatgatgtcatttgatcat-atcccatatatatat 3582422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14754222 - 14754163
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||  ||||||||||||| || ||| ||||||||||    
T  14754222 gatttggtgtcaaactaattttgacacca--gtgtcatttgatcatatccctatatatatat 14754163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 20054999 - 20055048
Alignment:
Q  12 aaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||||| ||||||||||||||||||||||| | | |||||||||||||    
T  20054999 aaactaattttgacaccatggtgtcatttgatcat-atcccatatatatat 20055048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10092969 - 10092908
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||| | | | ||||||||||| ||||||||||| || ||| ||||||||||    
T  10092969 gatttgatgtcaaatttagtttgacaccatggcgtcatttgatcatatccctatatatatat 10092908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 5881172 - 5881132
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||| |||||||||||||||||| ||| ||||||||||    
T  5881172 tgacaccttggtgtcatttgatcctatccctatatatatat 5881132  T

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Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 34654945 - 34654984
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  34654945 tgacaccatggtgtcatttgatcct-atcccatatatatat 34654984  T

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Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18969161 - 18969100
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  18969161 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatatatat 18969100  T

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Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 34713363 - 34713414
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaacccc 52  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  34713363 gatttgatgtcaaactaattttgacaccatggtgtcatttgattctaacccc 34713414  T

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Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1370209 - 1370149
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  1370209 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 1370149  T

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Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1371058 - 1371119
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||    
T  1371058 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccatatatatatat 1371119  T

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Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24063783 - 24063830
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaa 48  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  24063783 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaa 24063830  T

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Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 18969862 - 18969915
Alignment:
Q  8 tgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  18969862 tgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 18969915  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5114253 - 5114213
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttg 41  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  5114253 gatttggtgtcaaactaattttgacaccatggtgtcatttg 5114213  T

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Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 8992936 - 8992896
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  8992936 tgacaccatggtgtcatttgatcctatccctatatatatat 8992896  T

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Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 9017383 - 9017343
Alignment:
Q  22 tgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  9017383 tgacaccatggtgtcatttgatcctatccctatatatatat 9017343  T

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Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18649904 - 18649964
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatata 61  Q
    |||||| ||||||| | | | |||||||||||||||||||||||||| ||| |||||||||    
T  18649904 gatttggtgtcaaatttaatttgacaccatggtgtcatttgatcctatccctatatatata 18649964  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10788988 - 10789030
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgat 43  Q
    |||||||||||||||||||| |||||||||  |||||||||||    
T  10788988 gatttgatgtcaaactaattttgacaccatattgtcatttgat 10789030  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32907477 - 32907431
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    |||||| ||||||| ||| | ||||||||||||||||||||||||||    
T  32907477 gatttggtgtcaaattaaatttgacaccatggtgtcatttgatccta 32907431  T

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Target: scaffold0093 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22005 - 21944
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||||| ||| ||||||||||    
T  22005 gatttggtgtcaaactaattttgacaccatggtatcatttgatcctatccctatatatatat 21944  T

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Target: scaffold0093; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 22774 - 22819
Alignment:
Q  2 atttgatgtcaaactaattatgacaccatggtgtcatttgatccta 47  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  22774 atttggtgtcaaactaattttgacaccatggtgtcatttgatccta 22819  T

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Target: scaffold0050 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8461 - 8401
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  8461 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcct-atcccatatatatat 8401  T

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Target: scaffold1339 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1966 - 1906
Alignment:
Q  1 gatttgatgtcaaactaattatgacaccatggtgtcatttgatcctaaccccatatatatat 62  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||| | |||||||||||||    
T  1966 gatttggtgtcaaactaattttgacaccatggtgttatttgatcct-atcccatatatatat 1906  T

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