View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10798_low_30 (Length: 240)

Name: NF10798_low_30
Description: NF10798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10798_low_30
NF10798_low_30
[»] chr1 (77 HSPs)
chr1 (18-229)||(29007718-29007929)
chr1 (112-222)||(16322800-16322910)
chr1 (118-227)||(30371105-30371214)
chr1 (99-176)||(17269188-17269265)
chr1 (107-176)||(49517016-49517085)
chr1 (107-227)||(10199412-10199532)
chr1 (100-170)||(15360833-15360903)
chr1 (118-176)||(28467362-28467420)
chr1 (102-176)||(42556686-42556760)
chr1 (116-221)||(34179882-34179987)
chr1 (107-172)||(38578473-38578538)
chr1 (99-176)||(15361649-15361728)
chr1 (100-176)||(48830131-48830207)
chr1 (124-222)||(5592694-5592792)
chr1 (113-227)||(6292445-6292559)
chr1 (114-176)||(27738235-27738297)
chr1 (112-227)||(28689456-28689573)
chr1 (121-227)||(39347971-39348077)
chr1 (95-165)||(44936656-44936726)
chr1 (114-227)||(25479534-25479647)
chr1 (95-148)||(36641809-36641862)
chr1 (107-176)||(49557087-49557156)
chr1 (112-176)||(7218129-7218193)
chr1 (135-227)||(33723386-33723478)
chr1 (107-227)||(38170694-38170817)
chr1 (107-174)||(4200175-4200242)
chr1 (99-229)||(6659451-6659582)
chr1 (112-215)||(10809296-10809399)
chr1 (112-227)||(31517744-31517859)
chr1 (149-224)||(34290224-34290299)
chr1 (98-176)||(15488891-15488969)
chr1 (114-176)||(25006089-25006151)
chr1 (101-175)||(28837090-28837164)
chr1 (100-174)||(36151562-36151636)
chr1 (101-227)||(37842359-37842485)
chr1 (97-174)||(3062937-3063013)
chr1 (118-227)||(4576762-4576871)
chr1 (111-176)||(9656600-9656665)
chr1 (152-229)||(14629968-14630045)
chr1 (106-151)||(14737785-14737830)
chr1 (100-161)||(27140424-27140485)
chr1 (114-227)||(44032003-44032116)
chr1 (124-229)||(45205031-45205136)
chr1 (191-227)||(28077073-28077109)
chr1 (100-176)||(49692105-49692181)
chr1 (108-227)||(4622040-4622159)
chr1 (100-159)||(30815707-30815766)
chr1 (186-225)||(48748321-48748360)
chr1 (107-173)||(5421978-5422044)
chr1 (107-229)||(6074420-6074542)
chr1 (99-197)||(7273973-7274071)
chr1 (107-176)||(29045967-29046037)
chr1 (114-176)||(29128353-29128415)
chr1 (99-165)||(43372025-43372091)
chr1 (107-161)||(46499924-46499978)
chr1 (135-176)||(2487852-2487893)
chr1 (100-165)||(4256108-4256173)
chr1 (161-222)||(11893602-11893662)
chr1 (127-176)||(12018841-12018890)
chr1 (191-228)||(15361070-15361107)
chr1 (100-176)||(17422993-17423070)
chr1 (99-164)||(34619445-34619510)
chr1 (148-225)||(35590898-35590975)
chr1 (107-176)||(40304109-40304178)
chr1 (110-151)||(45234146-45234187)
chr1 (98-143)||(50319229-50319274)
chr1 (107-215)||(7472258-7472365)
chr1 (112-176)||(9572163-9572227)
chr1 (108-176)||(10581132-10581200)
chr1 (111-215)||(10799412-10799516)
chr1 (107-159)||(11211064-11211116)
chr1 (99-163)||(24146328-24146391)
chr1 (112-172)||(30259546-30259606)
chr1 (112-176)||(36070201-36070265)
chr1 (179-227)||(37593688-37593736)
chr1 (102-146)||(39803971-39804015)
chr1 (193-225)||(47885039-47885071)
[»] chr4 (80 HSPs)
chr4 (107-222)||(49219085-49219200)
chr4 (102-228)||(17884009-17884135)
chr4 (112-171)||(4071833-4071892)
chr4 (115-227)||(28300303-28300415)
chr4 (107-229)||(29263316-29263438)
chr4 (102-219)||(18628555-18628672)
chr4 (99-220)||(30207582-30207702)
chr4 (107-208)||(52735068-52735169)
chr4 (97-165)||(30024636-30024704)
chr4 (109-176)||(8130122-8130189)
chr4 (115-222)||(11802488-11802595)
chr4 (112-227)||(24929444-24929559)
chr4 (98-176)||(45128365-45128443)
chr4 (111-217)||(47118979-47119085)
chr4 (99-173)||(50745938-50746012)
chr4 (112-208)||(29778747-29778842)
chr4 (100-176)||(35958594-35958670)
chr4 (107-227)||(43824230-43824349)
chr4 (119-227)||(52746844-52746952)
chr4 (112-175)||(10192235-10192298)
chr4 (110-169)||(11917508-11917567)
chr4 (112-175)||(18630631-18630694)
chr4 (100-227)||(23819029-23819155)
chr4 (107-166)||(27623581-27623640)
chr4 (137-227)||(7694014-7694104)
chr4 (136-222)||(11698934-11699020)
chr4 (112-166)||(21953224-21953278)
chr4 (114-176)||(24160550-24160612)
chr4 (114-176)||(53626729-53626791)
chr4 (119-176)||(2996531-2996588)
chr4 (99-175)||(8422895-8422969)
chr4 (107-176)||(19154692-19154761)
chr4 (99-176)||(24160928-24161005)
chr4 (99-176)||(24443976-24444053)
chr4 (99-160)||(32724057-32724118)
chr4 (112-225)||(51630062-51630175)
chr4 (98-166)||(6364086-6364154)
chr4 (107-214)||(24370970-24371078)
chr4 (112-176)||(49085940-49086004)
chr4 (112-163)||(20936070-20936121)
chr4 (107-174)||(42321936-42322003)
chr4 (101-224)||(52315204-52315327)
chr4 (112-175)||(54325093-54325156)
chr4 (113-176)||(55870396-55870459)
chr4 (99-176)||(2465974-2466048)
chr4 (99-161)||(4663766-4663828)
chr4 (126-172)||(13949903-13949949)
chr4 (98-176)||(22471268-22471346)
chr4 (114-176)||(25885812-25885874)
chr4 (100-174)||(26883934-26884008)
chr4 (107-197)||(29373921-29374011)
chr4 (107-165)||(43372035-43372093)
chr4 (100-176)||(46019684-46019757)
chr4 (98-176)||(56480285-56480363)
chr4 (191-228)||(5131253-5131290)
chr4 (99-176)||(11389464-11389541)
chr4 (143-176)||(11842197-11842230)
chr4 (99-144)||(19422356-19422401)
chr4 (135-176)||(24091437-24091478)
chr4 (112-173)||(25434518-25434579)
chr4 (112-221)||(28232496-28232605)
chr4 (100-165)||(44119228-44119293)
chr4 (107-176)||(47946144-47946213)
chr4 (191-232)||(53673657-53673698)
chr4 (107-163)||(55437354-55437408)
chr4 (114-159)||(56007639-56007684)
chr4 (191-227)||(1137742-1137778)
chr4 (107-227)||(6466050-6466170)
chr4 (199-227)||(8469381-8469409)
chr4 (135-215)||(21157742-21157822)
chr4 (107-166)||(21952907-21952966)
chr4 (99-163)||(25487613-25487677)
chr4 (111-159)||(32764891-32764939)
chr4 (107-143)||(36048745-36048781)
chr4 (148-176)||(42866055-42866083)
chr4 (112-168)||(46013363-46013419)
chr4 (191-223)||(46110233-46110265)
chr4 (99-151)||(47970256-47970308)
chr4 (100-144)||(51044546-51044590)
chr4 (100-176)||(52645805-52645880)
[»] chr5 (57 HSPs)
chr5 (99-221)||(18704046-18704167)
chr5 (135-227)||(34205213-34205307)
chr5 (107-163)||(32969185-32969241)
chr5 (100-168)||(35135725-35135793)
chr5 (108-227)||(37588364-37588483)
chr5 (157-222)||(18906338-18906403)
chr5 (108-227)||(37526203-37526322)
chr5 (112-174)||(14295457-14295519)
chr5 (99-221)||(16889673-16889795)
chr5 (100-229)||(15402831-15402960)
chr5 (111-176)||(39823176-39823241)
chr5 (112-176)||(14331306-14331369)
chr5 (101-225)||(36796712-36796836)
chr5 (108-227)||(37690640-37690760)
chr5 (114-221)||(12595750-12595857)
chr5 (107-215)||(912663-912773)
chr5 (112-227)||(10303752-10303862)
chr5 (179-229)||(12521546-12521596)
chr5 (99-165)||(33459001-33459067)
chr5 (152-229)||(2880549-2880626)
chr5 (107-168)||(3566381-3566442)
chr5 (107-176)||(9703295-9703364)
chr5 (135-227)||(18543201-18543293)
chr5 (186-227)||(35963266-35963307)
chr5 (124-220)||(10272442-10272538)
chr5 (112-220)||(28586777-28586885)
chr5 (99-227)||(34690812-34690939)
chr5 (99-159)||(37063146-37063206)
chr5 (100-176)||(38047910-38047986)
chr5 (112-172)||(42181151-42181211)
chr5 (97-176)||(4855634-4855713)
chr5 (99-176)||(26209468-26209544)
chr5 (100-163)||(29116998-29117061)
chr5 (107-222)||(31694464-31694579)
chr5 (99-176)||(34117591-34117665)
chr5 (112-227)||(35960365-35960479)
chr5 (112-159)||(37386566-37386613)
chr5 (186-221)||(39607511-39607546)
chr5 (97-176)||(6738460-6738541)
chr5 (112-222)||(12975298-12975407)
chr5 (99-213)||(29588818-29588931)
chr5 (193-227)||(32059363-32059397)
chr5 (99-213)||(32172591-32172705)
chr5 (99-173)||(36539684-36539758)
chr5 (99-177)||(40452229-40452307)
chr5 (99-144)||(7096214-7096259)
chr5 (98-172)||(14599362-14599438)
chr5 (107-176)||(18857455-18857524)
chr5 (101-222)||(36639462-36639583)
chr5 (101-174)||(40097461-40097533)
chr5 (113-213)||(6593252-6593351)
chr5 (100-172)||(9927524-9927596)
chr5 (191-227)||(11615531-11615567)
chr5 (199-227)||(16457617-16457645)
chr5 (107-151)||(31208419-31208463)
chr5 (194-222)||(37929796-37929824)
chr5 (99-151)||(40048360-40048412)
[»] scaffold0024 (1 HSPs)
scaffold0024 (99-221)||(27514-27636)
[»] chr7 (60 HSPs)
chr7 (100-176)||(49060479-49060555)
chr7 (101-213)||(44241800-44241911)
chr7 (119-227)||(44151484-44151592)
chr7 (99-226)||(28165029-28165156)
chr7 (100-227)||(48157124-48157251)
chr7 (112-176)||(1417215-1417279)
chr7 (99-175)||(5373163-5373239)
chr7 (129-176)||(24909632-24909679)
chr7 (99-176)||(1432019-1432099)
chr7 (100-165)||(23918896-23918961)
chr7 (130-175)||(24895325-24895370)
chr7 (98-163)||(42656452-42656517)
chr7 (107-176)||(47004033-47004102)
chr7 (108-172)||(5010527-5010591)
chr7 (112-227)||(15075089-15075205)
chr7 (113-161)||(18749880-18749928)
chr7 (112-176)||(30456505-30456569)
chr7 (107-159)||(39591539-39591591)
chr7 (112-176)||(40689041-40689105)
chr7 (107-175)||(45813236-45813304)
chr7 (101-176)||(5006564-5006639)
chr7 (99-166)||(35536045-35536112)
chr7 (111-173)||(25511577-25511639)
chr7 (107-172)||(21853175-21853240)
chr7 (100-156)||(2223087-2223143)
chr7 (116-176)||(9527145-9527205)
chr7 (112-176)||(12110311-12110375)
chr7 (112-176)||(30496655-30496719)
chr7 (112-176)||(34083580-34083644)
chr7 (98-174)||(36874022-36874098)
chr7 (99-174)||(3610797-3610872)
chr7 (101-176)||(7623078-7623153)
chr7 (100-171)||(28613594-28613665)
chr7 (184-227)||(29286814-29286857)
chr7 (99-169)||(29768988-29769056)
chr7 (122-173)||(31002722-31002773)
chr7 (107-222)||(46081979-46082097)
chr7 (109-227)||(10190744-10190861)
chr7 (112-166)||(12835002-12835056)
chr7 (99-161)||(27121656-27121718)
chr7 (99-173)||(33894561-33894634)
chr7 (135-221)||(44821933-44822019)
chr7 (110-176)||(47046163-47046229)
chr7 (99-176)||(3501021-3501098)
chr7 (114-174)||(7453454-7453515)
chr7 (111-176)||(38010664-38010729)
chr7 (99-172)||(40009408-40009481)
chr7 (107-143)||(503414-503450)
chr7 (108-176)||(1373595-1373663)
chr7 (199-227)||(9423598-9423626)
chr7 (191-227)||(20553133-20553169)
chr7 (199-227)||(20888398-20888426)
chr7 (100-176)||(22759125-22759201)
chr7 (100-176)||(27481349-27481425)
chr7 (124-172)||(31338471-31338519)
chr7 (99-159)||(31341132-31341192)
chr7 (191-227)||(35267392-35267428)
chr7 (112-176)||(44910555-44910619)
chr7 (118-174)||(45777228-45777284)
chr7 (107-175)||(47177582-47177650)
[»] chr8 (57 HSPs)
chr8 (99-229)||(28769341-28769471)
chr8 (97-176)||(42597337-42597416)
chr8 (102-176)||(1470911-1470985)
chr8 (107-176)||(38561672-38561741)
chr8 (107-221)||(4762457-4762569)
chr8 (112-175)||(11056723-11056786)
chr8 (97-176)||(12361128-12361207)
chr8 (135-221)||(37776714-37776800)
chr8 (100-221)||(4558737-4558858)
chr8 (138-215)||(7645955-7646032)
chr8 (107-176)||(26820145-26820214)
chr8 (126-225)||(2482830-2482927)
chr8 (112-176)||(34770843-34770907)
chr8 (107-215)||(39561557-39561665)
chr8 (99-222)||(1561217-1561338)
chr8 (107-213)||(6509321-6509425)
chr8 (122-173)||(45071163-45071214)
chr8 (140-222)||(2091740-2091824)
chr8 (107-168)||(3945220-3945281)
chr8 (107-176)||(29973027-29973096)
chr8 (107-176)||(31862439-31862508)
chr8 (99-176)||(35869775-35869852)
chr8 (106-213)||(6864477-6864587)
chr8 (112-176)||(27728076-27728140)
chr8 (99-175)||(29699192-29699268)
chr8 (113-176)||(3537086-3537149)
chr8 (112-215)||(7918789-7918892)
chr8 (101-176)||(10075606-10075681)
chr8 (101-176)||(31884534-31884609)
chr8 (113-175)||(3269646-3269708)
chr8 (99-165)||(11188221-11188287)
chr8 (114-176)||(29262929-29262991)
chr8 (100-137)||(9928195-9928232)
chr8 (135-176)||(11415128-11415169)
chr8 (99-156)||(12224974-12225031)
chr8 (99-152)||(14482140-14482193)
chr8 (102-175)||(16210942-16211015)
chr8 (112-173)||(16733980-16734041)
chr8 (112-161)||(25867037-25867086)
chr8 (107-176)||(30627957-30628026)
chr8 (191-224)||(30918143-30918176)
chr8 (107-144)||(40728505-40728542)
chr8 (99-175)||(1112791-1112867)
chr8 (114-166)||(7853359-7853411)
chr8 (110-150)||(8799354-8799394)
chr8 (186-226)||(11000581-11000621)
chr8 (99-215)||(11795030-11795146)
chr8 (100-176)||(13459585-13459660)
chr8 (120-176)||(24558812-24558868)
chr8 (99-151)||(26215434-26215486)
chr8 (114-226)||(33714241-33714352)
chr8 (100-176)||(37461082-37461157)
chr8 (99-215)||(38036128-38036244)
chr8 (107-175)||(41208831-41208899)
chr8 (191-227)||(41606907-41606943)
chr8 (191-227)||(42215086-42215122)
chr8 (99-215)||(42370377-42370493)
[»] chr6 (53 HSPs)
chr6 (107-176)||(4006660-4006729)
chr6 (107-221)||(7785754-7785866)
chr6 (107-176)||(1402942-1403011)
chr6 (99-176)||(2514640-2514717)
chr6 (107-224)||(2735015-2735132)
chr6 (99-172)||(10452419-10452492)
chr6 (99-176)||(29274284-29274361)
chr6 (100-168)||(24836262-24836330)
chr6 (114-221)||(10154174-10154281)
chr6 (107-221)||(281858-281972)
chr6 (123-227)||(4420607-4420709)
chr6 (99-227)||(6647327-6647453)
chr6 (100-229)||(27893986-27894114)
chr6 (113-173)||(6310282-6310342)
chr6 (107-158)||(5328920-5328971)
chr6 (114-168)||(27595630-27595684)
chr6 (107-176)||(2027461-2027530)
chr6 (115-176)||(2727911-2727972)
chr6 (186-227)||(6536972-6537013)
chr6 (107-176)||(9093611-9093680)
chr6 (115-176)||(11340680-11340741)
chr6 (113-174)||(29296350-29296411)
chr6 (99-163)||(507158-507222)
chr6 (112-176)||(2117354-2117418)
chr6 (107-163)||(2206536-2206592)
chr6 (100-176)||(20671920-20671996)
chr6 (100-176)||(32975917-32975993)
chr6 (115-213)||(3204562-3204658)
chr6 (99-162)||(4325377-4325440)
chr6 (107-166)||(22742312-22742371)
chr6 (107-174)||(31420904-31420971)
chr6 (112-215)||(33787761-33787864)
chr6 (135-173)||(1904789-1904827)
chr6 (135-173)||(1909022-1909060)
chr6 (107-176)||(6909927-6909997)
chr6 (114-176)||(27693494-27693556)
chr6 (118-208)||(28621133-28621223)
chr6 (169-227)||(30863254-30863312)
chr6 (100-142)||(34544539-34544581)
chr6 (135-176)||(5550106-5550147)
chr6 (99-212)||(6654553-6654666)
chr6 (135-176)||(7485123-7485164)
chr6 (135-176)||(9604823-9604864)
chr6 (99-176)||(33069582-33069658)
chr6 (100-173)||(34429748-34429821)
chr6 (112-176)||(769090-769154)
chr6 (112-176)||(7354155-7354219)
chr6 (142-222)||(14282640-14282720)
chr6 (114-173)||(18604669-18604729)
chr6 (191-227)||(27909642-27909678)
chr6 (187-227)||(31583705-31583745)
chr6 (98-166)||(32206085-32206153)
chr6 (100-172)||(33500540-33500612)
[»] chr2 (72 HSPs)
chr2 (99-176)||(10143110-10143187)
chr2 (97-227)||(29316779-29316909)
chr2 (107-216)||(6988061-6988170)
chr2 (99-173)||(25609734-25609808)
chr2 (107-176)||(17952756-17952825)
chr2 (107-176)||(43199360-43199429)
chr2 (112-176)||(9878737-9878801)
chr2 (108-226)||(29628748-29628865)
chr2 (121-176)||(11513858-11513913)
chr2 (112-171)||(31740019-31740078)
chr2 (99-225)||(3235390-3235514)
chr2 (100-169)||(3423830-3423899)
chr2 (99-176)||(3673745-3673822)
chr2 (99-220)||(43635112-43635232)
chr2 (99-175)||(5133710-5133786)
chr2 (107-175)||(11344340-11344408)
chr2 (100-227)||(13864589-13864714)
chr2 (125-229)||(35485881-35485985)
chr2 (100-176)||(35755557-35755633)
chr2 (107-175)||(42907305-42907373)
chr2 (102-161)||(3458598-3458657)
chr2 (107-174)||(28803563-28803630)
chr2 (102-157)||(40837502-40837557)
chr2 (107-221)||(656787-656901)
chr2 (99-173)||(2416251-2416325)
chr2 (112-221)||(6227702-6227811)
chr2 (112-174)||(10285304-10285366)
chr2 (115-173)||(36114581-36114639)
chr2 (142-224)||(39236502-39236584)
chr2 (98-176)||(39567840-39567918)
chr2 (124-222)||(43141834-43141932)
chr2 (107-221)||(43259780-43259894)
chr2 (107-227)||(1939336-1939456)
chr2 (99-176)||(3102631-3102708)
chr2 (122-227)||(12313177-12313282)
chr2 (107-168)||(39929813-39929874)
chr2 (110-227)||(42817380-42817497)
chr2 (107-163)||(6547856-6547912)
chr2 (119-227)||(14666506-14666614)
chr2 (100-172)||(32694151-32694223)
chr2 (120-176)||(40145421-40145477)
chr2 (97-176)||(6993779-6993857)
chr2 (162-229)||(7871644-7871711)
chr2 (99-174)||(13630338-13630413)
chr2 (98-165)||(34339843-34339910)
chr2 (118-164)||(6546935-6546981)
chr2 (112-158)||(19629250-19629296)
chr2 (112-158)||(19826151-19826197)
chr2 (102-176)||(28933765-28933839)
chr2 (107-149)||(31461384-31461426)
chr2 (189-227)||(41809249-41809287)
chr2 (107-173)||(44439418-44439484)
chr2 (99-176)||(4550715-4550792)
chr2 (99-176)||(13866827-13866904)
chr2 (111-176)||(22681240-22681305)
chr2 (123-176)||(33942112-33942165)
chr2 (135-176)||(33944579-33944620)
chr2 (121-174)||(37292404-37292457)
chr2 (135-176)||(40889482-40889523)
chr2 (154-227)||(43911003-43911076)
chr2 (112-176)||(1742087-1742151)
chr2 (144-176)||(2142636-2142668)
chr2 (100-176)||(5867246-5867322)
chr2 (114-226)||(9395083-9395195)
chr2 (100-164)||(9478238-9478302)
chr2 (107-227)||(10563562-10563682)
chr2 (103-163)||(14209219-14209279)
chr2 (100-144)||(15171189-15171233)
chr2 (100-176)||(29430695-29430770)
chr2 (124-176)||(36863680-36863732)
chr2 (112-176)||(37053545-37053609)
chr2 (135-215)||(43173196-43173276)
[»] chr3 (65 HSPs)
chr3 (98-176)||(24235738-24235816)
chr3 (102-176)||(48397587-48397661)
chr3 (100-197)||(48364913-48365010)
chr3 (101-176)||(1395611-1395686)
chr3 (99-221)||(27792810-27792932)
chr3 (107-176)||(10101531-10101600)
chr3 (107-176)||(10212456-10212525)
chr3 (107-176)||(23952161-23952230)
chr3 (107-172)||(29771755-29771820)
chr3 (107-176)||(51510248-51510317)
chr3 (100-176)||(37788800-37788875)
chr3 (97-221)||(40122763-40122886)
chr3 (121-176)||(32555036-32555091)
chr3 (118-224)||(1816540-1816646)
chr3 (114-227)||(21862179-21862293)
chr3 (98-176)||(44061078-44061156)
chr3 (107-176)||(10357379-10357448)
chr3 (107-176)||(48323767-48323836)
chr3 (107-175)||(30956682-30956750)
chr3 (107-175)||(30972494-30972562)
chr3 (100-176)||(43116483-43116559)
chr3 (129-176)||(10540547-10540594)
chr3 (101-176)||(22214736-22214811)
chr3 (101-176)||(42084306-42084381)
chr3 (112-227)||(45432943-45433058)
chr3 (107-158)||(54775074-54775125)
chr3 (116-206)||(31337426-31337516)
chr3 (102-176)||(33882969-33883043)
chr3 (107-165)||(37689450-37689508)
chr3 (129-182)||(10526236-10526289)
chr3 (120-176)||(23530239-23530296)
chr3 (107-176)||(32095246-32095315)
chr3 (135-176)||(35364266-35364307)
chr3 (112-237)||(40665380-40665505)
chr3 (107-215)||(24887299-24887407)
chr3 (99-143)||(41028939-41028983)
chr3 (107-163)||(49586984-49587040)
chr3 (148-215)||(14548737-14548804)
chr3 (112-164)||(26990685-26990739)
chr3 (100-171)||(32703077-32703148)
chr3 (138-173)||(35246649-35246684)
chr3 (188-227)||(42745065-42745104)
chr3 (114-161)||(42808932-42808979)
chr3 (97-176)||(47217293-47217372)
chr3 (99-165)||(8007761-8007827)
chr3 (99-173)||(20192664-20192738)
chr3 (118-221)||(23793545-23793644)
chr3 (114-156)||(25195377-25195419)
chr3 (135-173)||(28779330-28779368)
chr3 (102-176)||(32064381-32064454)
chr3 (112-158)||(45535355-45535401)
chr3 (109-159)||(53736185-53736235)
chr3 (139-176)||(21872326-21872363)
chr3 (126-211)||(23315591-23315676)
chr3 (99-227)||(30573918-30574044)
chr3 (99-176)||(33307507-33307584)
chr3 (107-176)||(51197791-51197859)
chr3 (112-176)||(237348-237412)
chr3 (109-172)||(2152251-2152315)
chr3 (100-144)||(24605103-24605147)
chr3 (112-176)||(33405222-33405286)
chr3 (118-222)||(33965497-33965604)
chr3 (124-176)||(35450554-35450605)
chr3 (116-168)||(52064485-52064537)
chr3 (107-227)||(52618949-52619069)
[»] scaffold0590 (1 HSPs)
scaffold0590 (99-165)||(1140-1206)
[»] scaffold0275 (1 HSPs)
scaffold0275 (99-165)||(2769-2835)
[»] scaffold0549 (2 HSPs)
scaffold0549 (115-176)||(1779-1840)
scaffold0549 (115-176)||(3869-3930)
[»] scaffold0508 (1 HSPs)
scaffold0508 (99-176)||(9830-9907)
[»] scaffold0049 (1 HSPs)
scaffold0049 (107-176)||(58148-58217)
[»] scaffold0015 (1 HSPs)
scaffold0015 (113-172)||(69002-69061)
[»] scaffold0044 (1 HSPs)
scaffold0044 (135-227)||(51956-52046)
[»] scaffold0053 (1 HSPs)
scaffold0053 (112-176)||(20130-20194)


Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 18 - 229
Target Start/End: Complemental strand, 29007929 - 29007718
Alignment:
Q  18 aatgatatacttattgtttagataagcaacttaattaagcgcatatcatttaagtatttatgtatttcttttttaagattacttatgtctaagttatttc 117  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29007929 aatgatatacttattgtttaggtaagcaacttaattaagcgcgtatcatttaagtatttatgtatttcttttttaagattacttatgtctaagttatttc 29007830  T
Q  118 tataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaac 217  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29007829 tataacaaaagaaaaattaaagtcaaactattttcatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaac 29007730  T
Q  218 ttatgaacatat 229  Q
    ||||||||||||    
T  29007729 ttatgaacatat 29007718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 16322800 - 16322910
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 211  Q
    ||||| |||| ||||||| ||| || ||||||| |||||| ||| ||| |||||| ||||||||| ||||| |||||| ||||||| |||||||||| ||    
T  16322800 tatttttatatcaaaagataaaatatagtcaaactattttcatagaagttataagctgttttcataggctattttgaagagcttatggaaataagctaaa 16322899  T
Q  212 aacaacttatg 222  Q
    |||||||||||    
T  16322900 aacaacttatg 16322910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 30371105 - 30371214
Alignment:
Q  118 tataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaac 217  Q
    |||||||||||| ||| |||| ||||||| |||| ||||||||||||||||||||||||  |  | |||| | ||| ||| |||||||||||||||||||    
T  30371105 tataacaaaagataaaataaactcaaattgttttcatataagctataagttgttttcataagacattttggagagcgtattgaaataagctgaaaacaac 30371204  T
Q  218 ttatgaacat 227  Q
    ||||| ||||    
T  30371205 ttatggacat 30371214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 17269188 - 17269265
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| ||||||||||||| ||||||||  ||| |||||||||||| |||| |||||||| |||||||||||||||    
T  17269188 cttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcat 17269265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 49517016 - 49517085
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||||||||||||| ||| |||||||||||| |||| || ||||||||||| |||||||||    
T  49517016 taagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcat 49517085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 107 - 227
Target Start/End: Complemental strand, 10199532 - 10199412
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||||||||||||||||  |||| ||| |||||||||| ||||||  ||||| | ||||| | |||||||  |||| |||  | |||||||  |||||||    
T  10199532 taagttatttctataacccaagataaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaataag 10199433  T
Q  207 ctgaaaacaacttatgaacat 227  Q
    |||||||||||||||||||||    
T  10199432 ctgaaaacaacttatgaacat 10199412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 15360833 - 15360903
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgt 170  Q
    |||||| | ||||||||||||||||||||| ||| |||||||||| | |||| ||||||||||||||||||    
T  15360833 ttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagttgt 15360903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 28467420 - 28467362
Alignment:
Q  118 tataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||    
T  28467420 tataacaaaagataaaataaagtcaaattattttcatataagctacaagttgttttcat 28467362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 42556760 - 42556686
Alignment:
Q  102 atgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| |||||||||||||| ||||||||  || |||| ||||| || ||||||||||||||||||||||||||||    
T  42556760 atgtataagttatttctatgacaaaagatgaaataaaatcaaactacttttatataagctataagttgttttcat 42556686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 34179987 - 34179882
Alignment:
Q  116 tctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaaca 215  Q
    |||||||||||||| ||| |||||||||||| |||| || ||||||||||  |||||||||   |||   ||||||| |||| |||||| ||||||||||    
T  34179987 tctataacaaaagataaaataaagtcaaattgttttaatctaagctataaactgttttcataaactatcctgaaaagtttatggaaatacgctgaaaaca 34179888  T
Q  216 acttat 221  Q
    ||||||    
T  34179887 acttat 34179882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 38578473 - 38578538
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttt 172  Q
    |||| |||||||||||||||||| ||  |||||| ||||||||||| |||||||||||||||||||    
T  38578473 taagctatttctataacaaaagataacataaagttaaattatttttgtataagctataagttgttt 38578538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 15361649 - 15361728
Alignment:
Q  99 cttatgtctaagttatttctataacaaa--agaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| |||  |||||||||||||||  ||| ||| ||||||||||||||||| |||||||||||||| |||||||||    
T  15361649 cttatgtgtaaactatttctataacaaagaagataaagtaaagtcaaattattttcatataagctataagctgttttcat 15361728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 48830207 - 48830131
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||||||||||||| || ||||| ||| |||||||||| |||||| |||||||||||||  |||||||||    
T  48830207 ttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataaactgttttcat 48830131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 5592792 - 5592694
Alignment:
Q  124 aaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatg 222  Q
    |||||| ||| ||||||| |||| || | ||||||||||||||||||||||||  |||| | | || |||||||  |||||||||| ||||||||||||    
T  5592792 aaaagataaaataaagtcgaattgttgtcatataagctataagttgttttcataagctagtcttaagagcttatgaaaataagctggaaacaacttatg 5592694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 6292445 - 6292559
Alignment:
Q  113 atttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaa 212  Q
    ||||||||||||||| ||| | ||||||||||||||||| | ||||  |||||| | ||||| |   ||| |||| | |||||||  |||||||||||||    
T  6292445 atttctataacaaaaaaaataataaagtcaaattattttcacataacttataagctattttcgtaaactattttggagagcttatgaaaataagctgaaa 6292544  T
Q  213 acaacttatgaacat 227  Q
    ||| |||||||||||    
T  6292545 acagcttatgaacat 6292559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 27738297 - 27738235
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| ||||||||| ||| |||||||||||| |||| ||||||||||||| ||||||||||    
T  27738297 tttctacaacaaaagataaaataaagtcaaattgttttcatataagctataatttgttttcat 27738235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 28689573 - 28689456
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcg--gctactttgaaaagcttatcgaaataagctg 209  Q
    |||||||||| ||||||| ||| ||||  ||| |  |||| ||||||||||||||||||||||||    ||||  ||| |||||||||  ||||||||||    
T  28689573 tatttctatatcaaaagataaaataaatgcaagtggttttcatataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctg 28689474  T
Q  210 aaaacaacttatgaacat 227  Q
    ||||||||||||| ||||    
T  28689473 aaaacaacttatggacat 28689456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 39348077 - 39347971
Alignment:
Q  121 aacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaactta 220  Q
    ||||||||| ||| ||||||| ||  ||| | ||| ||||||||||||||||||||   |||   || ||||||||| ||||||||||||||||||||||    
T  39348077 aacaaaagataaaataaagtccaaccattctcatacaagctataagttgttttcataaactatcctgcaaagcttatggaaataagctgaaaacaactta 39347978  T
Q  221 tgaacat 227  Q
    || ||||    
T  39347977 tggacat 39347971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 44936726 - 44936656
Alignment:
Q  95 attacttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataa 165  Q
    |||||||| ||  |||||||||||||||||||||| ||  |||||||||| |||||| |||||||||||||    
T  44936726 attacttaagtagaagttatttctataacaaaagataagataaagtcaaactattttcatataagctataa 44936656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 227
Target Start/End: Original strand, 25479534 - 25479647
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaa 213  Q
    |||||||||| ||||| ||| ||| |||||||| | || ||||| ||||||||||||||||||  ||||   |  | |||||||  ||||||||||||||    
T  25479534 tttctataaccaaagataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaa 25479633  T
Q  214 caacttatgaacat 227  Q
    ||||| ||||||||    
T  25479634 caactaatgaacat 25479647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 36641809 - 36641862
Alignment:
Q  95 attacttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattat 148  Q
    ||||||||| | ||||||||||||||||||||||| ||| ||||||||||||||    
T  36641809 attacttatatataagttatttctataacaaaagataaaataaagtcaaattat 36641862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 49557087 - 49557156
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||||||||||||| ||| |||||| ||||  | || || |||||||||||||||||||||    
T  49557087 taagttatttctataacaaaagataaaataaagttaaatagtattcatttaagctataagttgttttcat 49557156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 7218193 - 7218129
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||| |||||  ||| |||||||||||| |||| ||||||||||||||||||||||||    
T  7218193 tatttccataataaaaggtaaaataaagtcaaattgttttcatataagctataagttgttttcat 7218129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 33723478 - 33723386
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    |||||||||||| |||| |||||| |||| |  |||||||||  |||||  || ||||||||| ||||||||||||||||| || ||||||||    
T  33723478 taaagtcaaattgttttcatataaactatgaactgttttcataagctaccctgtaaagcttatggaaataagctgaaaacatctcatgaacat 33723386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 227
Target Start/End: Complemental strand, 38170817 - 38170694
Alignment:
Q  107 taagttatttctataacaaaaga-aaaattaaagtcaaattatttttatataagctataagttg--ttttcatcggctactttgaaaagcttatcgaaat 203  Q
    |||| |||||||| ||||||||| ||||| ||||| ||||||||||  |||||||||||| |||  ||||  |  |||| |||||| ||||||   |||     
T  38170817 taagatatttctacaacaaaagataaaataaaagttaaattattttcgtataagctataaattgtttttttgtaagctaatttgaagagcttaggaaaac 38170718  T
Q  204 aagctgaaaacaacttatgaacat 227  Q
    ||||||||||||||||||||||||    
T  38170717 aagctgaaaacaacttatgaacat 38170694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 4200175 - 4200242
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    |||||||||| |||||||||||| ||| ||||||||| || |||| ||||||||||||  ||||||||    
T  4200175 taagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctatatattgttttc 4200242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 229
Target Start/End: Original strand, 6659451 - 6659582
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaatta-aagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttat 197  Q
    |||||| ||||| |||||||||| ||||| |  || || |||||||||   ||| |||||||||||||| |||||||||  ||||      | |||||||    
T  6659451 cttatgcctaagctatttctatagcaaaacatcaaatataagtcaaatggctttcatataagctataagatgttttcataagctaaccaagagagcttat 6659550  T
Q  198 cgaaataagctgaaaacaacttatgaacatat 229  Q
    ||||||||||||||||||||||||| ||||||    
T  6659551 cgaaataagctgaaaacaacttatggacatat 6659582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 10809296 - 10809399
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 211  Q
    ||||||| |||||||| | ||| |||||| ||| ||||||| | |||||||||||||||| ||||| ||||  ||| | | |||||  ||||||||||||    
T  10809296 tatttctgtaacaaaatagaaaataaagttaaagtatttttgtgtaagctataagttgttctcatcagctatattggagaacttatgaaaataagctgaa 10809395  T
Q  212 aaca 215  Q
    ||||    
T  10809396 aaca 10809399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 31517859 - 31517744
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 211  Q
    |||||||| ||||||||| ||| |||||| |||||  ||| |||||||||||||| ||| |||||   ||   ||| | |||||||  ||||||||||||    
T  31517859 tatttctacaacaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaa 31517760  T
Q  212 aacaacttatgaacat 227  Q
    |||| |||||||||||    
T  31517759 aacagcttatgaacat 31517744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 34290224 - 34290299
Alignment:
Q  149 ttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaa 224  Q
    |||| ||||||||||||| |||||||||  ||||  ||||| | |||||  |||||||||||||||||||||||||    
T  34290224 ttttgtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaa 34290299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 15488891 - 15488969
Alignment:
Q  98 acttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||| |||||| ||||||| | |||||| ||  |||||||||| |||||||||||||| |||| ||||| |||||    
T  15488891 acttatgtataagttgtttctatgataaaagataacataaagtcaaactatttttatataagatatacgttgtcttcat 15488969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 25006151 - 25006089
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||| | |  ||| |||||||||||| |||| ||||||||||||||||||||||||    
T  25006151 tttctataacagacggtaaaataaagtcaaattgttttcatataagctataagttgttttcat 25006089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 28837164 - 28837090
Alignment:
Q  101 tatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    ||||| |||||||||| | |||||||||| |||||| |||   ||||||||| ||||||| ||||||||||||||    
T  28837164 tatgtataagttatttttttaacaaaagataaattatagttggattatttttgtataagcaataagttgttttca 28837090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 36151636 - 36151562
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    |||||| |||| |||||| ||||||||||| ||| |||||||||||| ||||  |||||| ||||| ||||||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataagttataaattgttttc 36151562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 227
Target Start/End: Complemental strand, 37842485 - 37842359
Alignment:
Q  101 tatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcga 200  Q
    ||||| |||| |||||||||| |||||||  || |||||| ||| | | ||   ||||||||||||||||||||||  ||||  ||||| | |||||  |    
T  37842485 tatgtataagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaa 37842386  T
Q  201 aataagctgaaaacaacttatgaacat 227  Q
    ||||||||||||||  |||||||||||    
T  37842385 aataagctgaaaactgcttatgaacat 37842359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 3062937 - 3063013
Alignment:
Q  97 tacttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    ||||||||| || |||||| ||| ||||||||| ||| ||| |||||||| ||||||||||| ||||||| |||||||    
T  3062937 tacttatgtataggttatt-ctacaacaaaagataaaataatgtcaaattgtttttatataaactataagatgttttc 3063013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 4576762 - 4576871
Alignment:
Q  118 tataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaac 217  Q
    ||||||||||||  || |||||| ||| ||||||| || ||| |||||| |||||||||  ||||  ||||| | |||||  |||||||||||| |||||    
T  4576762 tataacaaaagattaaataaagttaaaatatttttgtacaagttataagctgttttcataagctatattgaataacttatgaaaataagctgaacacaac 4576861  T
Q  218 ttatgaacat 227  Q
    |||| |||||    
T  4576862 ttataaacat 4576871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 9656600 - 9656665
Alignment:
Q  111 ttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||| ||||| | ||| |||||| |||||||||| |||||||||||||| ||| |||||    
T  9656600 ttatttctatagcaaaaaataaaataaagttaaattattttcatataagctataagctgtgttcat 9656665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 14630045 - 14629968
Alignment:
Q  152 tatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaacatat 229  Q
    ||||||||||||||| | |||||||  ||||  ||| | |  |||| |||||||||||||||||||||||||||||||    
T  14630045 tatataagctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaacatat 14629968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 14737830 - 14737785
Alignment:
Q  106 ctaagttatttctataacaaaagaaaaattaaagtcaaattatttt 151  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||    
T  14737830 ctaagttatttctataacaaaagataaaataaagtcaaattgtttt 14737785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 27140424 - 27140485
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagct 161  Q
    |||||| ||||||||||||||||||||||| ||| |||  | ||||| ||||||||||||||    
T  27140424 ttatgtgtaagttatttctataacaaaagataaaataatattaaattgtttttatataagct 27140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 227
Target Start/End: Complemental strand, 44032116 - 44032003
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaa 213  Q
    |||||||||||||||  ||| |||||||||||| |||| |||||||||||||  | ||||| |  | ||  ||||| ||||||| ||||| |||||||||    
T  44032116 tttctataacaaaagctaaaataaagtcaaattgttttcatataagctataaactattttcttaagttatcttgaagagcttatggaaattagctgaaaa 44032017  T
Q  214 caacttatgaacat 227  Q
     | |||||| ||||    
T  44032016 tagcttatggacat 44032003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 229
Target Start/End: Original strand, 45205031 - 45205136
Alignment:
Q  124 aaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatga 223  Q
    |||||| ||| |||||||||| |||||  |||||||||| |||||||||||||  ||||   || | || | || |||||||||||||||||||||| |     
T  45205031 aaaagataaaataaagtcaaactatttccatataagctagaagttgttttcataagctatcatgtagagttcatggaaataagctgaaaacaacttaggg 45205130  T
Q  224 acatat 229  Q
    ||||||    
T  45205131 acatat 45205136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 28077109 - 28077073
Alignment:
Q  191 agcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    ||||||| |||||||||||||||||||||||||||||    
T  28077109 agcttattgaaataagctgaaaacaacttatgaacat 28077073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 49692181 - 49692105
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||||||||||||||| ||| || ||| |||||||| | ||| |||||||||||||| ||  ||||||||    
T  49692181 ttatgtataagttatttctataataaaggataaaataaagtcagactatatttatataagctatgagccgttttcat 49692105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 227
Target Start/End: Original strand, 4622040 - 4622159
Alignment:
Q  108 aagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagc 207  Q
    ||||||||||||||||||||||  || | || ||||| | |||| |||||||||||||| ||||| |||  ||||  ||| | ||||| |  ||||||||    
T  4622040 aagttatttctataacaaaagatcaaatgaattcaaactcttttcatataagctataagctgtttccatatgctatcttggagagcttgtgaaaataagc 4622139  T
Q  208 tgaaaacaacttatgaacat 227  Q
    | |||||| |||||| ||||    
T  4622140 taaaaacagcttatggacat 4622159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 30815766 - 30815707
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataag 159  Q
    ||||||||||| | |||||||||||||||| ||| |||||| ||| |||||| |||||||    
T  30815766 ttatgtctaagctttttctataacaaaagataaaataaagttaaactattttcatataag 30815707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 48748360 - 48748321
Alignment:
Q  186 tgaaaagcttatcgaaataagctgaaaacaacttatgaac 225  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  48748360 tgaagagcttatggaaataagctgaaaacaacttatgaac 48748321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 5422044 - 5421978
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    |||| |||||| || |||||||| ||| || ||||||||| ||||  ||||||||||||||||||||    
T  5422044 taagctatttccatgacaaaagataaaatatagtcaaattgttttcttataagctataagttgtttt 5421978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 6074420 - 6074542
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||| ||||||||||||||||||  |  |||||| ||| | |||| ||||||||||| |||||||||| |  ||||   |||| |||||| | |||||||    
T  6074420 taagctatttctataacaaaagatgatataaagttaaactgttttcatataagctatgagttgttttcttaagctagcctgaagagcttaccaaaataag 6074519  T
Q  207 ctgaaaacaacttatgaacatat 229  Q
     |||||| | |||||| ||||||    
T  6074520 ttgaaaatatcttatggacatat 6074542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 197
Target Start/End: Complemental strand, 7274071 - 7273973
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttat 197  Q
    ||||||| || ||||||| ||||||||||||  || |||||||||||| |||| ||| ||| |||||| ||||| |||   |||| ||||| |||||||    
T  7274071 cttatgtatatgttatttttataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgtttccataaactaccttgaagagcttat 7273973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 29046037 - 29045967
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaa-agtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| |||||||||||||||||| |||  || || |||||| || | ||||||||||||||||||||||||    
T  29046037 taagatatttctataacaaaagataaacaaatagccaaattgttctcatataagctataagttgttttcat 29045967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 29128415 - 29128353
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||||||| ||| |||||| || |||||||  | |||||||||| ||||||||||    
T  29128415 tttctataacaaaagataaaataaagttaatttattttcgtttaagctataaattgttttcat 29128353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 43372091 - 43372025
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataa 165  Q
    ||||||| || | |||||||||||||| ||| ||| || |||||||||||||| | |||||||||||    
T  43372091 cttatgtataggctatttctataacaatagataaaatagagtcaaattattttcacataagctataa 43372025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 46499978 - 46499924
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagct 161  Q
    |||| ||||||||||| |||||| ||| |||||||||||| ||||||| ||||||    
T  46499978 taagctatttctataagaaaagataaaataaagtcaaattgtttttatttaagct 46499924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 2487893 - 2487852
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||||||  |||||||||||||||| |||||||    
T  2487893 taaagtcaaattatttggatataagctataagttattttcat 2487852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 4256173 - 4256108
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataa 165  Q
    |||||| |||| |||||||| ||||||||| | | |||||| ||||||||||  ||||||||||||    
T  4256173 ttatgtataagctatttctacaacaaaagatacaataaagttaaattattttcgtataagctataa 4256108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 11893662 - 11893602
Alignment:
Q  161 tataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatg 222  Q
    |||||||||||| |||  |||| |||||| || |||| ||||||||||||||||||||||||    
T  11893662 tataagttgttt-cataagctattttgaagagtttatggaaataagctgaaaacaacttatg 11893602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 12018890 - 12018841
Alignment:
Q  127 agaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| |||||||||||| ||||| ||||||||||||  |||||||||    
T  12018890 agaaaaaataaagtcaaattgtttttttataagctataaactgttttcat 12018841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 15361070 - 15361107
Alignment:
Q  191 agcttatcgaaataagctgaaaacaacttatgaacata 228  Q
    |||||||  |||||||||||||||||||||||||||||    
T  15361070 agcttatgaaaataagctgaaaacaacttatgaacata 15361107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 17423070 - 17422993
Alignment:
Q  100 ttatgtctaagttatttctataacaaaa-gaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||| | |||||||||||||| || ||| |||||||||  |  ||| ||||||||||||||||||||||||    
T  17423070 ttatgtataagctttttctataacaaaacgataaaataaagtcaagctgatttcatataagctataagttgttttcat 17422993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 34619510 - 34619445
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctata 164  Q
    ||||||| ||||  ||||||||||||||||| ||| ||| || ||||| ||||| |||||||||||    
T  34619510 cttatgtataagccatttctataacaaaagataaaataaggttaaattgtttttgtataagctata 34619445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 35590975 - 35590898
Alignment:
Q  148 tttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaac 225  Q
    ||||| |||||||||||||| | ||||||  ||||   || | ||||||| |||||||||||||||||||| ||||||    
T  35590975 tttttgtataagctataagtcgatttcataagctatcatggagagcttatggaaataagctgaaaacaactgatgaac 35590898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 40304178 - 40304109
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| ||||| |||||||||||| ||| |||| ||| ||| |||| ||||||| |||||| |||||||||    
T  40304178 taagctatttatataacaaaagataaaataaaatcacattgttttcatataagttataagctgttttcat 40304109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 45234146 - 45234187
Alignment:
Q  110 gttatttctataacaaaagaaaaattaaagtcaaattatttt 151  Q
    ||||||||||||| |||||| ||| |||||||||||||||||    
T  45234146 gttatttctataataaaagataaaataaagtcaaattatttt 45234187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 50319229 - 50319274
Alignment:
Q  98 acttatgtctaagttatttctataacaaaagaaaaattaaagtcaa 143  Q
    |||||||| |||| |||||||||||||||||| ||| |||||||||    
T  50319229 acttatgtataagctatttctataacaaaagataaaataaagtcaa 50319274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 215
Target Start/End: Original strand, 7472258 - 7472365
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||| |||||||||||||||||| | | ||| || ||||| ||||| ||||| ||||||| ||||| |||  ||||  ||| | |||||||  |||||||    
T  7472258 taagctatttctataacaaaagatataataa-gttaaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataag 7472356  T
Q  207 ctgaaaaca 215  Q
    |||||||||    
T  7472357 ctgaaaaca 7472365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 9572227 - 9572163
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||| ||||||| ||| |||||| |||||  |||| |||||||||||||  ||||||||    
T  9572227 tatttctatagcaaaagataaaataaagttaaattgcttttgtataagctataagccgttttcat 9572163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 10581200 - 10581132
Alignment:
Q  108 aagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||  || ||||| || ||| |||||||||| | |||| || |||||||||||||||||||||    
T  10581200 aagttattttgatgacaaaggataaaataaagtcaaacttttttcatttaagctataagttgttttcat 10581132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 10799412 - 10799516
Alignment:
Q  111 ttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctga 210  Q
    |||||||  |||||||| | ||| |||||| ||| |  |||| | |||||||||||||||| ||||| ||||| ||| | | |||||  |||||||||||    
T  10799412 ttatttcggtaacaaaatagaaaataaagttaaagtgcttttgtgtaagctataagttgttctcatcagctacattggagaacttatgaaaataagctga 10799511  T
Q  211 aaaca 215  Q
    |||||    
T  10799512 aaaca 10799516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 11211064 - 11211116
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataag 159  Q
    ||||||||||||| ||||||||| ||| |||||| ||||| |||| |||||||    
T  11211064 taagttatttctagaacaaaagataaaataaagttaaatttttttcatataag 11211116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 24146391 - 24146328
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctat 163  Q
    ||||||| ||||||||||||||||||||||  |||| ||| ||||| |||||| ||||| |||||    
T  24146391 cttatgtataagttatttctataacaaaagtcaaatgaaa-tcaaactattttcatatacgctat 24146328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 30259606 - 30259546
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttt 172  Q
    |||||||||||||||| | ||| |||||||||| |  ||| |||||||||||||| |||||    
T  30259606 tatttctataacaaaatataaaataaagtcaaactgctttgatataagctataagctgttt 30259546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 36070201 - 36070265
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||| |||||||||||| ||| |||||| ||||| | ||   ||||||||||||||||||||||    
T  36070201 tatttttataacaaaagataaaataaagttaaattgtcttcggataagctataagttgttttcat 36070265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 37593736 - 37593688
Alignment:
Q  179 gctactttgaaaagcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    |||| |||||| |||||||  |||||||||||||||| |||||||||||    
T  37593736 gctattttgaagagcttatgaaaataagctgaaaacagcttatgaacat 37593688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 39804015 - 39803971
Alignment:
Q  102 atgtctaagttatttctataacaaaagaaaaattaaagtcaaatt 146  Q
    |||| ||||||||||||| ||||||||| ||| ||||||||||||    
T  39804015 atgtataagttatttctacaacaaaagacaaaataaagtcaaatt 39803971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 47885071 - 47885039
Alignment:
Q  193 cttatcgaaataagctgaaaacaacttatgaac 225  Q
    ||||| |||||||||||||||||||||||||||    
T  47885071 cttatggaaataagctgaaaacaacttatgaac 47885039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 49219085 - 49219200
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||| ||||||||||||||||||||||||   |||  || || || |||| ||||||||    
T  49219085 taagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaataag 49219184  T
Q  207 ctgaaaacaacttatg 222  Q
    ||||||||||||||||    
T  49219185 ctgaaaacaacttatg 49219200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 17884009 - 17884135
Alignment:
Q  102 atgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaa 201  Q
    |||| |||| |||||||||||||||||| ||| |||||| ||||| ||||| |||||| ||| ||||||||||||  ||||  ||| | |||||||  ||    
T  17884009 atgtgtaagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaa 17884108  T
Q  202 ataagctgaaaacaacttatgaacata 228  Q
    || ||||||||||||||||||||||||    
T  17884109 attagctgaaaacaacttatgaacata 17884135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 4071833 - 4071892
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtt 171  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  4071833 tatttctataacaaaagataaaataaagtcaaattattttcatataagctataagttgtt 4071892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 115 - 227
Target Start/End: Complemental strand, 28300415 - 28300303
Alignment:
Q  115 ttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaac 214  Q
    ||||||||  ||||||||| |||||| ||||| ||||| ||||||||||||  | ||||||| |||||  ||||| |||||||  ||||||| |||||||    
T  28300415 ttctataatcaaagaaaaaataaagttaaattgtttttgtataagctataaactattttcataggctatcttgaagagcttatgaaaataagttgaaaac 28300316  T
Q  215 aacttatgaacat 227  Q
    |||||| ||||||    
T  28300315 aacttaagaacat 28300303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 29263316 - 29263438
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||||||||||| ||||| | || ||| |||||| | ||| |||| | |||||| |||||||||||||||  ||||   || | ||||| | ||||||||    
T  29263316 taagttatttctctaacagatgataaaataaagttacattgttttcaaataagcgataagttgttttcataagctatcctgcagagcttgtggaaataag 29263415  T
Q  207 ctgaaaacaacttatgaacatat 229  Q
    |||||||||||||||||||||||    
T  29263416 ctgaaaacaacttatgaacatat 29263438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 18628672 - 18628555
Alignment:
Q  102 atgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaa 201  Q
    |||| ||| |||||||| ||||||||| |||| || ||||||| | |||||||||||| |||||  |||||||||  | ||  ||| | ||||||| |||    
T  18628672 atgtataaattatttctttaacaaaaggaaaaatatagtcaaactgtttttatataagttataaactgttttcataagttatcttggagagcttatggaa 18628573  T
Q  202 ataagctgaaaacaactt 219  Q
    ||||||||||||||||||    
T  18628572 ataagctgaaaacaactt 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 220
Target Start/End: Complemental strand, 30207702 - 30207582
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| || |||| ||||||||||||| | ||| |||| ||||| | |||| ||||||||||||||||||||||||  ||||| ||  | || ||||     
T  30207702 cttatgtatatgttagttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttgttttcataagctaccttagagagattatg 30207604  T
Q  199 gaaataagctgaaaacaactta 220  Q
    ||||||||||||||||| ||||    
T  30207603 gaaataagctgaaaacagctta 30207582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 208
Target Start/End: Original strand, 52735068 - 52735169
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||| ||||||| |||||||||| ||| ||||||||||||| ||| ||||||| |||| ||||||||| |  ||||  ||||| ||||||| ||||||||    
T  52735068 taagctatttctgtaacaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgtaagctatcttgaagagcttatggaaataag 52735167  T
Q  207 ct 208  Q
    ||    
T  52735168 ct 52735169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 30024636 - 30024704
Alignment:
Q  97 tacttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataa 165  Q
    ||||||||  ||||||||||||||||||||||| ||| |||||| ||||| |||| |||||||||||||    
T  30024636 tacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctataa 30024704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 8130122 - 8130189
Alignment:
Q  109 agttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| |||||||||||||||| ||  ||||||||||||||||| |||||||||||||  |||||||||    
T  8130122 agttctttctataacaaaagataacataaagtcaaattattttcatataagctataaactgttttcat 8130189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 115 - 222
Target Start/End: Original strand, 11802488 - 11802595
Alignment:
Q  115 ttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaac 214  Q
    ||||||||||||||| ||| |||||||||||| || | | |||||||| |||||||||||||  |||| | || | |||||||   ||||||||||||||    
T  11802488 ttctataacaaaagataaaataaagtcaaatttttctcacataagctacaagttgttttcataagctattatggagagcttatgagaataagctgaaaac 11802587  T
Q  215 aacttatg 222  Q
    | ||||||    
T  11802588 agcttatg 11802595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 24929444 - 24929559
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 211  Q
    |||||||||||||||||| ||| ||||||| || | |||| ||| ||||||||||||||||||||   ||    |  | ||||||| |||||||||||||    
T  24929444 tatttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataaactctactagagagcttatggaaataagctgaa 24929543  T
Q  212 aacaacttatgaacat 227  Q
    ||||| ||||||||||    
T  24929544 aacaatttatgaacat 24929559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 45128443 - 45128365
Alignment:
Q  98 acttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||| |||  |||||||||||||||||| ||| | || |||||||||| | ||||||||||||| ||||||||||    
T  45128443 acttatgtataaactatttctataacaaaagataaaatcaaatcaaattattctcatataagctataaattgttttcat 45128365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 47119085 - 47118979
Alignment:
Q  111 ttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctga 210  Q
    ||||||||||| ||||||| |||  ||||| ||||| |||| |||||||||||||||||| |||||  ||||  ||||| | |||||  | |||||||||    
T  47119085 ttatttctatatcaaaagataaaacaaagttaaattgttttcatataagctataagttgtattcatatgctatcttgaagaacttatgaagataagctga 47118986  T
Q  211 aaacaac 217  Q
    |||||||    
T  47118985 aaacaac 47118979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 50745938 - 50746012
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    |||||||||||| ||||| |||||||||||| ||| |||| ||||| | ||||||||||| ||| ||||||||||    
T  50745938 cttatgtctaagctatttttataacaaaagataaaataaaatcaaactgtttttatataaactacaagttgtttt 50746012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 208
Target Start/End: Original strand, 29778747 - 29778842
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagct 208  Q
    ||||||| |||||||| | ||||||| || ||||| |||| ||||||||| ||||||||||||||  ||||| ||||| |||||||  |||||||||    
T  29778747 tatttctttaacaaaa-ataaattaaggtgaaattgttttcatataagctgtaagttgttttcataagctaccttgaagagcttatgaaaataagct 29778842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 35958594 - 35958670
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||| ||||||||||||| |||  ||| ||||||||||||  |||||||||||||| ||| |||||||||    
T  35958594 ttatgtataagctatttctataacataagttaaaataaagtcaaatttgttttatataagctagaagctgttttcat 35958670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 227
Target Start/End: Original strand, 43824230 - 43824349
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||| ||||||| || ||||||| || ||||| ||||||| |||| ||||||| |||||| | ||||| |  | ||   || ||||||||| ||||||||    
T  43824230 taagctatttctttagcaaaagataa-ttaaaatcaaattcttttcatataagttataagcttttttcgtaagttatcctggaaagcttatggaaataag 43824328  T
Q  207 ctgaaaacaacttatgaacat 227  Q
    |||||||||||||||||||||    
T  43824329 ctgaaaacaacttatgaacat 43824349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 52746952 - 52746844
Alignment:
Q  119 ataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaact 218  Q
    ||||||||||| ||| |||||| ||||| ||||| | ||||| ||||| |||||||||  ||||  ||| || ||||||  |||| ||||||||||| ||    
T  52746952 ataacaaaagataaaataaagttaaattgtttttgtgtaagccataagctgttttcataagctatcttgtaaggcttatgaaaatcagctgaaaacagct 52746853  T
Q  219 tatgaacat 227  Q
    |||||||||    
T  52746852 tatgaacat 52746844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 10192235 - 10192298
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    ||||| |||||||||||| | | |||||||||||| |||| ||||||| |||||||||||||||    
T  10192235 tatttttataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttca 10192298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 11917508 - 11917567
Alignment:
Q  110 gttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttg 169  Q
    ||||||| | |||||||||| ||| ||||||||||||||||| |||||| ||||||||||    
T  11917508 gttatttttgtaacaaaagataaaataaagtcaaattattttcatataacctataagttg 11917567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 18630631 - 18630694
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    |||||| ||||||||||| ||| ||||||||| |  |||| |||||||||||||||||||||||    
T  18630631 tatttcaataacaaaagataaaataaagtcaattggttttcatataagctataagttgttttca 18630694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 227
Target Start/End: Original strand, 23819029 - 23819155
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcg 199  Q
    |||||| ||||||||||| ||||||||   |||||  | |||||| | |||| ||||||| |||||  |||||||||  ||||  ||||| ||||||| |    
T  23819029 ttatgtataagttatttccataacaaatataaaatgta-gtcaaactgttttcatataagttataacatgttttcataagctatcttgaagagcttatag 23819127  T
Q  200 aaataagctgaaaacaacttatgaacat 227  Q
    ||||||| ||||||||||||||| ||||    
T  23819128 aaataagatgaaaacaacttatggacat 23819155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 27623581 - 27623640
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataag 166  Q
    |||| ||||| |||||||||||| ||| |||||||||| |||||| ||||||||||||||    
T  27623581 taagatatttgtataacaaaagataaaataaagtcaaactattttaatataagctataag 27623640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 7694104 - 7694014
Alignment:
Q  137 aagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    |||||||| | ||||| ||||||||||||| |||||||||  | ||   || | || |||| |||||||||||||||||||||||||||||    
T  7694104 aagtcaaactgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacat 7694014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 222
Target Start/End: Original strand, 11698934 - 11699020
Alignment:
Q  136 aaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatg 222  Q
    ||||||||| |||||| ||||| | || |||||||||||||  ||||| |||| |||||||| |||||||  |||||||| ||||||    
T  11698934 aaagtcaaactattttcatatatgttagaagttgttttcataagctaccttgacaagcttatagaaataaagtgaaaacagcttatg 11699020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 21953224 - 21953278
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataag 166  Q
    |||||||||||||||||  ||| |||||||||| | |||||||||||||||||||    
T  21953224 tatttctataacaaaagggaaaataaagtcaaactctttttatataagctataag 21953278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 24160612 - 24160550
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||||||| ||  |||| ||||| |||||| || |||||||||||||||||||||    
T  24160612 tttctataacaaaagataatataaattcaaactattttcatgtaagctataagttgttttcat 24160550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 53626729 - 53626791
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||||||| ||| |||| ||||| | |||| |||||||||||||| |||||||||    
T  53626729 tttctataacaaaagataaaataaattcaaaatgttttcatataagctataagctgttttcat 53626791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 2996531 - 2996588
Alignment:
Q  119 ataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||| ||| || ||||||||| |||||||||||| ||||||||||||||||    
T  2996531 ataacataagataaaatacagtcaaattgtttttatataagttataagttgttttcat 2996588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 8422969 - 8422895
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    ||||||| |||| ||||| ||||| |||||| ||| ||||||||  || |||| |||||||||||||||||||||||    
T  8422969 cttatgtataagctatttttataaaaaaagataaaataaagtca--ttgttttcatataagctataagttgttttca 8422895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 19154692 - 19154761
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||| ||||||||||||| | || |||||||  ||| |||||||||||||  |||||||||    
T  19154692 taagttatttctaaaacaaaagaaaaaatcaaatcaaattgctttcatataagctataaactgttttcat 19154761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 24160928 - 24161005
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| |||| ||||||||||||||| || ||| | |||| |||||||||| || || |||||||||||| |||||    
T  24160928 cttatgtataagctatttctataacaaaggataaaatcaagttaaattattttcatgtaggctataagttgtgttcat 24161005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 24443976 - 24444053
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| ||||  ||||||| ||||||| | ||| |||| |||||  ||||| ||||||||||||||||||||||||    
T  24443976 cttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttgttttcat 24444053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 32724057 - 32724118
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagc 160  Q
    |||||||||||  ||||||||| |||||||| ||| |||||||||| |||||| ||||||||    
T  32724057 cttatgtctaatctatttctattacaaaagataaaataaagtcaaactattttcatataagc 32724118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 225
Target Start/End: Original strand, 51630062 - 51630175
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 211  Q
    ||||| |||| ||||||| ||| |||||| ||||| |||| |||||||||||||| | |||||||  ||||  ||||| |  ||||  ||||||||||||    
T  51630062 tatttatatagcaaaagataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaa 51630161  T
Q  212 aacaacttatgaac 225  Q
    |||| |||| ||||    
T  51630162 aacatcttacgaac 51630175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 6364086 - 6364154
Alignment:
Q  98 acttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataag 166  Q
    |||||||| |||| |||||||||||||||||| ||| |||||| ||||| | || | ||||||||||||    
T  6364086 acttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataag 6364154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 24371078 - 24370970
Alignment:
Q  107 taagttatttctataac-aaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataa 205  Q
    |||| |||||||||||| |||||| ||| |||| |||||||  ||||| | ||||||||||||||||||||  ||||   | || || |||| |||||||    
T  24371078 taagctatttctataaccaaaagataaaataaattcaaattgcttttacaaaagctataagttgttttcataagctatcctaaatagtttatagaaataa 24370979  T
Q  206 gctgaaaac 214  Q
    |||||||||    
T  24370978 gctgaaaac 24370970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 49085940 - 49086004
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||| |||||||||||| ||| ||| |||||| |||||| ||| ||| ||||||||||||||||    
T  49085940 tatttatataacaaaagataaaataatgtcaaactattttcatacaagttataagttgttttcat 49086004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 20936121 - 20936070
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctat 163  Q
    |||||||||||||||||| ||| |||||||||| |||||| || ||||||||    
T  20936121 tatttctataacaaaagataaaataaagtcaaactattttcatgtaagctat 20936070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 42322003 - 42321936
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    |||| ||||| ||||||||| || ||| |||||||||||| |||| ||||||  ||||||||||||||    
T  42322003 taagctatttttataacaaatgataaaataaagtcaaattgttttcatataaattataagttgttttc 42321936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 52315327 - 52315204
Alignment:
Q  101 tatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcga 200  Q
    ||||| |||| |||||||| | |||||||  || ||||||  |||| ||||||   ||| |||||||||||| |||  |||| |||| ||| |||||  |    
T  52315327 tatgtataagctatttctacagcaaaagatgaaataaagtttaattgtttttagtaaagttataagttgtttccataagctattttggaaaacttatgaa 52315228  T
Q  201 aataagctgaaaacaacttatgaa 224  Q
    |||||||||||| |||||||||||    
T  52315227 aataagctgaaagcaacttatgaa 52315204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 54325156 - 54325093
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    ||||||||| |||||||| ||| |||||||||| | |||| |||||||||||||| | ||||||    
T  54325156 tatttctattacaaaagataaaataaagtcaaactgttttcatataagctataagctattttca 54325093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 176
Target Start/End: Complemental strand, 55870459 - 55870396
Alignment:
Q  113 atttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| ||||||||||||  || |||||||||| | |||| | ||||||||||||||||||||||    
T  55870459 atttttataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgttttcat 55870396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 2466048 - 2465974
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| ||||||||| |||||||||  || ||||| || |||| || ||||| |||||||||||||||||||||||    
T  2466048 cttatgtataagttatt-ctataacaa--gataaattcaattcaatttgtttttgtataagctataagttgttttcat 2465974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 4663828 - 4663766
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagct 161  Q
    ||||||| ||||||||||||||||||||  | ||| | ||| |||| ||||||||||||||||    
T  4663828 cttatgtataagttatttctataacaaagaataaaatgaagccaaactatttttatataagct 4663766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 13949949 - 13949903
Alignment:
Q  126 aagaaaaattaaagtcaaattatttttatataagctataagttgttt 172  Q
    |||| ||| |||||||||||| |||| ||||||||||||||||||||    
T  13949949 aagataaaataaagtcaaattgttttcatataagctataagttgttt 13949903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 22471268 - 22471346
Alignment:
Q  98 acttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||| ||||  |||||| |||  ||||| ||||||||| |||| | |||| ||||||| ||||||||||||||||    
T  22471268 acttatgtataagccatttctttaattaaagataaattaaaggcaaactgttttcatataagttataagttgttttcat 22471346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 25885812 - 25885874
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||| ||||||| ||| |||||| ||||| ||||  | |||||||||||||||||||||    
T  25885812 tttctatagcaaaagataaaataaagttaaattgttttcgtgtaagctataagttgttttcat 25885874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 174
Target Start/End: Original strand, 26883934 - 26884008
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    |||||| |||||||||||| ||| || ||| ||| | |||| ||||| |||| ||||||||||||||| ||||||    
T  26883934 ttatgtataagttatttctctaagaagagataaaatgaagttaaattgttttcatataagctataagtcgttttc 26884008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 29374011 - 29373921
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttat 197  Q
    |||| ||||||||||||| |||| ||| ||| |||||| | | || ||||||||||||| ||||||||||  | || ||||||||| ||||    
T  29374011 taagctatttctataacagaagataaaataatgtcaaaatgtattcatataagctataatttgttttcataagttattttgaaaagtttat 29373921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 43372093 - 43372035
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataa 165  Q
    |||| ||||| |||||||||||| ||| || ||||||| | ||||||||||||||||||    
T  43372093 taaggtatttttataacaaaagataaaatacagtcaaactgtttttatataagctataa 43372035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 46019757 - 46019684
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||| |||||||| ||||||||||||| ||||| |||| | |||||||| |||   ||||||||||||||    
T  46019757 ttatgtgtaagctatttctagaacaaaagaaaaaataaagccaaactgtttttatacaag---taagttgttttcat 46019684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 56480285 - 56480363
Alignment:
Q  98 acttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||| || |||| |||||| ||||||||||| ||| |||||| ||||| ||| | |||||| |||||| |||||||||    
T  56480285 acttacgtataagctatttccataacaaaagacaaaataaagttaaattgtttatgtataagttataagctgttttcat 56480363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 5131290 - 5131253
Alignment:
Q  191 agcttatcgaaataagctgaaaacaacttatgaacata 228  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  5131290 agcttatggaaataagctgaaaacaacttatggacata 5131253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 11389464 - 11389541
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| ||| |||||||||||| |||||| ||| |||||| ||| | |||| |||||| ||||||||  |||||||    
T  11389464 cttatgtataaattatttctataaaaaaagataaagtaaagttaaactgttttaatataaactataagtcattttcat 11389541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 176
Target Start/End: Original strand, 11842197 - 11842230
Alignment:
Q  143 aattatttttatataagctataagttgttttcat 176  Q
    ||||||||| ||||||||||||||||||||||||    
T  11842197 aattattttcatataagctataagttgttttcat 11842230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 19422356 - 19422401
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaa 144  Q
    ||||||| ||||||||||||||||||||||| | | ||||||||||    
T  19422356 cttatgtataagttatttctataacaaaagatataataaagtcaaa 19422401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 24091437 - 24091478
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||||||| |||||||||||||  |||||||||    
T  24091437 taaagtcaaattattttcatataagctataaactgttttcat 24091478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 173
Target Start/End: Complemental strand, 25434579 - 25434518
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    ||||||| ||| |||||| ||| |||||||||  | |||| |||||||||||||||||||||    
T  25434579 tatttctgtaagaaaagataaaataaagtcaatatgttttcatataagctataagttgtttt 25434518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 28232496 - 28232605
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 211  Q
    |||||||||| ||||||| ||| | || |||||||||||  |||||||||||||  || |||||   ||||| ||  | ||||| | |||||||| ||||    
T  28232496 tatttctatagcaaaagataaaatcaaatcaaattatttccatataagctataaactgctttcagaagctaccttcgagagcttgtggaaataagatgaa 28232595  T
Q  212 aacaacttat 221  Q
    ||||||||||    
T  28232596 aacaacttat 28232605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 44119293 - 44119228
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataa 165  Q
    |||||| ||||||||||||||| ||||||| |||  ||||||||  | |||| |||||||||||||    
T  44119293 ttatgtataagttatttctatagcaaaagataaaacaaagtcaatatgttttcatataagctataa 44119228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 47946144 - 47946213
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||||||||  |||| ||| | |||| ||||| ||||  |||||||||||| ||||||||||    
T  47946144 taagttatttctataacgtaagataaaatgaagttaaattgttttcgtataagctataaattgttttcat 47946213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 53673698 - 53673657
Alignment:
Q  191 agcttatcgaaataagctgaaaacaacttatgaacatatgat 232  Q
    |||||||  ||||||||||||||||||||||| |||||||||    
T  53673698 agcttatgtaaataagctgaaaacaacttatggacatatgat 53673657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 55437408 - 55437354
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctat 163  Q
    |||| |||||||||||||| | ||||  ||||||||||||||||| |||||||||||    
T  55437408 taagctatttctataacaatataaaa--taaagtcaaattattttcatataagctat 55437354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 56007639 - 56007684
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataag 159  Q
    ||||||| |||||||||||| |||||||||| | ||||||||||||    
T  56007639 tttctatgacaaaagaaaaaataaagtcaaactgtttttatataag 56007684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 1137742 - 1137778
Alignment:
Q  191 agcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  1137742 agcttatggaaataaactgaaaacaacttatgaacat 1137778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 227
Target Start/End: Complemental strand, 6466170 - 6466050
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||||| ||| ||||||| ||||  || |||||| ||||| ||||| ||||| ||||||||||||| |||  |||| | |  | || |||| ||||||||    
T  6466170 taagttgtttatataacacaagatcaaataaagtgaaattctttttgtataatctataagttgtttccataagctattctagagagattatggaaataag 6466071  T
Q  207 ctgaaaacaacttatgaacat 227  Q
     |||||| | |||||||||||    
T  6466070 ttgaaaatagcttatgaacat 6466050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Complemental strand, 8469409 - 8469381
Alignment:
Q  199 gaaataagctgaaaacaacttatgaacat 227  Q
    |||||||||||||||||||||||||||||    
T  8469409 gaaataagctgaaaacaacttatgaacat 8469381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 21157742 - 21157822
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaaca 215  Q
    |||||||||| | |||| || ||||||||||| |||||||||  ||||   |||| ||||||| |||||||||| ||||||    
T  21157742 taaagtcaaactgttttcatgtaagctataagatgttttcatatgctatcctgaagagcttatggaaataagctaaaaaca 21157822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 21952907 - 21952966
Alignment:
Q  107 taagttatttctataacaa-aagaaaaattaaagtcaaattatttttatataagctataag 166  Q
    |||| |||||||||||||| ||| |||| |||||||||||| |||| ||||||||||||||    
T  21952907 taagctatttctataacaacaagtaaaa-taaagtcaaattgttttcatataagctataag 21952966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 25487677 - 25487613
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctat 163  Q
    ||||||| |||| |||||||||||||||| | ||| ||||||||  || |||| |||||||||||    
T  25487677 cttatgtataagctatttctataacaaaaaataaaataaagtcacgtttttttcatataagctat 25487613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 32764891 - 32764939
Alignment:
Q  111 ttatttctataacaaaagaaaaattaaagtcaaattatttttatataag 159  Q
    ||||||||||||||||||||||| ||||| || | | ||||||||||||    
T  32764891 ttatttctataacaaaagaaaaaataaaggcagactgtttttatataag 32764939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 36048745 - 36048781
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaa 143  Q
    |||| |||||||||||||||||| |||||||||||||    
T  36048745 taagctatttctataacaaaagataaattaaagtcaa 36048781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 176
Target Start/End: Original strand, 42866055 - 42866083
Alignment:
Q  148 tttttatataagctataagttgttttcat 176  Q
    |||||||||||||||||||||||||||||    
T  42866055 tttttatataagctataagttgttttcat 42866083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 46013419 - 46013363
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagtt 168  Q
    |||||||  ||||||||| ||| |||||||||| | |||||||||||| ||||||||    
T  46013419 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 46013363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 223
Target Start/End: Original strand, 46110233 - 46110265
Alignment:
Q  191 agcttatcgaaataagctgaaaacaacttatga 223  Q
    ||||||| |||||||||||||||||||||||||    
T  46110233 agcttatagaaataagctgaaaacaacttatga 46110265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 47970256 - 47970308
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttt 151  Q
    ||||||| |||| |||||||||||||||||| ||| | |||||||| ||||||    
T  47970256 cttatgtataagctatttctataacaaaagataaaatgaagtcaaactatttt 47970308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 51044590 - 51044546
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaa 144  Q
    |||||| |||| |||||||||||||||||| ||| ||||||||||    
T  51044590 ttatgtataagctatttctataacaaaagataaaataaagtcaaa 51044546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 52645880 - 52645805
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||| |||||||||||||||||| ||| | || ||||| | ||||||| | |||||||| ||||||||||    
T  52645880 ttatgtataagctatttctataacaaaagataaaatcaattcaaactgtttttatgt-agctataacttgttttcat 52645805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 18704167 - 18704046
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| ||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||||||||||||  |||| |   || | |||||     
T  18704167 cttatgtataagttatttctataacaaaagataaat-aaagtcaagctatttttatataagctataagttgttttcataagctattacaaagatcttatg 18704069  T
Q  199 gaaataagctgaaaacaacttat 221  Q
    |||||||||||||||||||||||    
T  18704068 gaaataagctgaaaacaacttat 18704046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 34205213 - 34205307
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcatcggcta-ctttgaaaagcttatcgaaat-aagctgaaaacaacttatgaacat 227  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||| |||  |||||||||| ||||| ||  ||||||||||||||||||||    
T  34205213 taaagtcaaattatttttatataagctataagttgttttcataagctatcttgaaaaagcttatggaaataaatgtgaaaacaacttatgaacat 34205307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 32969241 - 32969185
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctat 163  Q
    |||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  32969241 taagttgtttctataacaaaagataaaataaagtcaaattatttttatataagctat 32969185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 35135793 - 35135725
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagtt 168  Q
    |||||| |||| |||||||||||||||||| ||| |||||||||| |||||| ||||||||||||||||    
T  35135793 ttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataagtt 35135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 227
Target Start/End: Complemental strand, 37588483 - 37588364
Alignment:
Q  108 aagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagc 207  Q
    ||||||||||||||| |||||| ||| | || |||||   |||| ||||||||||||||||||||||||  | || | || | ||||||| |||||||||    
T  37588483 aagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagc 37588384  T
Q  208 tgaaaacaacttatgaacat 227  Q
    |||||||| ||||| |||||    
T  37588383 tgaaaacagcttattaacat 37588364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 18906338 - 18906403
Alignment:
Q  157 aagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatg 222  Q
    |||||||||  |||||||||  ||||  ||||||||||||||||||||||||||||||||||||||    
T  18906338 aagctataaactgttttcataagctatcttgaaaagcttatcgaaataagctgaaaacaacttatg 18906403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 227
Target Start/End: Complemental strand, 37526322 - 37526203
Alignment:
Q  108 aagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagc 207  Q
    ||||||||||||||| |||||| ||| | || |||||   |||| ||||||||||||||||||||||||  | |  | || | ||||||| |||||||||    
T  37526322 aagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttgttctggagagcttatggaaataagc 37526223  T
Q  208 tgaaaacaacttatgaacat 227  Q
    |||||||| ||||| |||||    
T  37526222 tgaaaacagcttattaacat 37526203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 14295457 - 14295519
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    |||||||||||||||||| ||| |||||||||| | |||| |||||||||||||| |||||||    
T  14295457 tatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttc 14295519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 16889673 - 16889795
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| |||| |||||| ||||||||||| ||| | |||||||| | |||||||| |||||||||| |||||||||  ||||   |  | || ||||     
T  16889673 cttatgtataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcataagctatgctagagagtttatg 16889772  T
Q  199 gaaataagctgaaaacaacttat 221  Q
    ||||||| |||||||||||||||    
T  16889773 gaaataatctgaaaacaacttat 16889795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 229
Target Start/End: Complemental strand, 15402960 - 15402831
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcg 199  Q
    |||||| |||||||||||  |||||||||| ||| || |||| || | |||| | | ||||||||||||||||||||   ||| |||  | | | ||| |    
T  15402960 ttatgtttaagttatttcattaacaaaagataaaatagagtcgaaatgttttcaaaaaagctataagttgttttcataacctattttagagaacgtatag 15402861  T
Q  200 aaataagctgaaaacaacttatgaacatat 229  Q
    |||| |||||||||||||||||||||||||    
T  15402860 aaattagctgaaaacaacttatgaacatat 15402831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 39823241 - 39823176
Alignment:
Q  111 ttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||||||||||| ||| |||||||||| || ||| |||||||||| |||||||||||||    
T  39823241 ttatttatataacaaaagataaaataaagtcaaactactttcatataagctacaagttgttttcat 39823176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 14331306 - 14331369
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||| ||||||| |||| ||||||| |||||||||||||||| |||||||| |||||||    
T  14331306 tatttctatagcaaaagataaat-aaagtcagattatttttatataagttataagttattttcat 14331369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 225
Target Start/End: Complemental strand, 36796836 - 36796712
Alignment:
Q  101 tatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcga 200  Q
    ||||| ||||||||||||  ||||||| | ||| ||| || |||||||||| | |||||||||||| |||||||||  ||||  ||| ||| ||||   |    
T  36796836 tatgtataagttatttctgcaacaaaaaataaaataaggttaaattattttcacataagctataagctgttttcatttgctatattggaaaacttacaaa 36796737  T
Q  201 aataagctgaaaacaacttatgaac 225  Q
    ||||| ||||||||| |||||||||    
T  36796736 aataaactgaaaacagcttatgaac 36796712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 227
Target Start/End: Complemental strand, 37690760 - 37690640
Alignment:
Q  108 aagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat-cggctactttgaaaagcttatcgaaataag 206  Q
    ||||||||||||||| |||||| ||| | || |||||   |||| ||||||||||||||||||||||||   | || | || | ||||||| ||||||||    
T  37690760 aagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataaagttattatggagagcttatggaaataag 37690661  T
Q  207 ctgaaaacaacttatgaacat 227  Q
    ||||||||| ||||| |||||    
T  37690660 ctgaaaacagcttattaacat 37690640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 12595857 - 12595750
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaa 213  Q
    |||||||||||||||| ||| |||||| ||||| |||| |||||| |||| || || ||||||  ||||| || || ||||||| ||||| || ||||||    
T  12595857 tttctataacaaaagataaaataaagttaaattgttttcatataaactatgagctggtttcataagctaccttaaagagcttatagaaatcagttgaaaa 12595758  T
Q  214 caacttat 221  Q
    || |||||    
T  12595757 cagcttat 12595750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 215
Target Start/End: Complemental strand, 912773 - 912663
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtc-aaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcg-aaata 204  Q
    |||||||||||||||||| || | ||| ||||||| ||||| |||| |||||||| |||||||||||| ||   |||  ||| ||||||||| | |||||    
T  912773 taagttatttctataacacaatataaaataaagtcaaaattgttttcatataagcaataagttgtttttataaactatcttggaaagcttatggaaaata 912674  T
Q  205 agctgaaaaca 215  Q
    |||||||||||    
T  912673 agctgaaaaca 912663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 10303752 - 10303862
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 211  Q
    |||||||||||||||||| ||| |||||||||||| |||| || ||| |  ||||||||||||||  |    |||| |||||||||  |||||||||||     
T  10303752 tatttctataacaaaagataaaataaagtcaaattgttttcatttaacc--taagttgttttcataag---ttttggaaagcttatgaaaataagctgac 10303846  T
Q  212 aacaacttatgaacat 227  Q
    ||||||||||| ||||    
T  10303847 aacaacttatggacat 10303862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 12521546 - 12521596
Alignment:
Q  179 gctactttgaaaagcttatcgaaataagctgaaaacaacttatgaacatat 229  Q
    |||| |||||| ||||||| ||||||||||||||||| |||||||||||||    
T  12521546 gctattttgaagagcttatggaaataagctgaaaacagcttatgaacatat 12521596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 33459067 - 33459001
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataa 165  Q
    ||||||| ||||||||||||||||||||||| ||| ||||||  |||| ||| ||||||| ||||||    
T  33459067 cttatgtataagttatttctataacaaaagacaaaataaagttgaattgtttatatataaactataa 33459001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 2880626 - 2880549
Alignment:
Q  152 tatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaacatat 229  Q
    ||||||| |||||||||||||| ||  |||| |  ||| || |||| ||||||||||||||||| |||||||||||||    
T  2880626 tatataatctataagttgtttttataagctattcagaagagtttatggaaataagctgaaaacaccttatgaacatat 2880549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 3566442 - 3566381
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagtt 168  Q
    |||| |||||||||| | ||||| ||| |||||| ||||||||||| |||||||||||||||    
T  3566442 taagctatttctatacccaaagagaaaataaagttaaattatttttgtataagctataagtt 3566381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 9703364 - 9703295
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||| |||||| ||| ||| |||||||||| |  ||| |||||||||| |||||||||||||    
T  9703364 taagttatttctgtaacaagagataaaataaagtcaaactcatttcatataagctacaagttgttttcat 9703295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 18543293 - 18543201
Alignment:
Q  135 taaagtcaaa-ttatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    |||||||||| || |||||||||||| ||||||||||||||||  ||||   || | ||||||| |||||||||||||||||||| ||| ||||    
T  18543293 taaagtcaaacttgtttttatataagatataagttgttttcataagctatcctggagagcttat-gaaataagctgaaaacaactcatggacat 18543201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 35963266 - 35963307
Alignment:
Q  186 tgaaaagcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  35963266 tgaaaagcttatggaaataagctgaaaacaacttatggacat 35963307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 10272538 - 10272442
Alignment:
Q  124 aaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaactta 220  Q
    |||||| ||| | |||||||||| ||||  |||||||||||||||||||||||  || |  ||| | || ||||  |||||||||||||||||||||    
T  10272538 aaaagataaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaactta 10272442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 28586885 - 28586777
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 211  Q
    |||||||||||||||||| ||| |||||||||| | |||| ||||||  |||||| |||||| |   ||||   |  | |||||||||||||||||||||    
T  28586885 tatttctataacaaaagataaaataaagtcaaactgttttcatataaattataagctgttttgacgagctatcctagagagcttatcgaaataagctgaa 28586786  T
Q  212 aacaactta 220  Q
    |||| ||||    
T  28586785 aacagctta 28586777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 227
Target Start/End: Original strand, 34690812 - 34690939
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| || | |||||||||||||||||| ||| |||||||| | || ||| |||| |||||||||||||| ||||  || |  ||| | |||||||     
T  34690812 cttatgtatacgctatttctataacaaaagataaaataaagtcacaatactttcatat-agctataagttgttctcataagccatcttggagagcttatg 34690910  T
Q  199 gaaataagctgaaaacaacttatgaacat 227  Q
    ||||||||  || ||||||||||| ||||    
T  34690911 gaaataagtcgataacaacttatggacat 34690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 37063206 - 37063146
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataag 159  Q
    ||||||| |||  |||||||||||||||||| ||| |||||||||| |||||| |||||||    
T  37063206 cttatgtataaactatttctataacaaaagataaaataaagtcaaactattttcatataag 37063146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 38047986 - 38047910
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||| ||| ||| |||||||||| ||| ||||||||||||||||| |||||  ||||| | |||||||||    
T  38047986 ttatgtataagctatatctctaacaaaagataaaataaagtcaaattattttcatatatactatatgctgttttcat 38047910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 42181211 - 42181151
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttt 172  Q
    ||||| |||||||||||| |||  ||||||||||  |||| ||||||||||||||||||||    
T  42181211 tatttttataacaaaagataaaacaaagtcaaatggttttcatataagctataagttgttt 42181151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 4855634 - 4855713
Alignment:
Q  97 tacttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||| | || ||||| |||||||||| | ||| |||||| ||||| || | ||||||| ||||||||||||||||    
T  4855634 tacttatgtattagctatttttataacaaaaaataaaataaagttaaattgttatcatataagttataagttgttttcat 4855713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 26209544 - 26209468
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttt-tatataagctataagttgttttcat 176  Q
    ||||||| |||||||||||||||||  |||| ||| ||||||| |||| ||||  |||||||||||||| |||||||||    
T  26209544 cttatgtataagttatttctataac--aagataaaataaagtccaattgttttcaatataagctataagctgttttcat 26209468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 29117061 - 29116998
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctat 163  Q
    |||||| || |||||||||||||||||||| ||| |||||||||| | ||||  ||||||||||    
T  29117061 ttatgtatatgttatttctataacaaaagataaaataaagtcaaactgttttcgtataagctat 29116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 31694464 - 31694579
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||| ||| |||||||||||| | ||| |||||||||| | |||||||| || |||||||||||| || |  |||   ||| | |||||||  |||||||    
T  31694464 taagctatgtctataacaaaacataaactaaagtcaaactgtttttatacaaactataagttgttctcttaagctcacttgtagagcttatgaaaataag 31694563  T
Q  207 ctgaaaacaacttatg 222  Q
     |||||||||||||||    
T  31694564 ttgaaaacaacttatg 31694579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 34117665 - 34117591
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| |||||||||||| |||||||||| ||| ||| ||   |||||||  ||||||||||||||||| ||||||    
T  34117665 cttatgtataagttatttctttaacaaaagataaaataaggt---attatttacatataagctataagttgctttcat 34117591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 35960365 - 35960479
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 211  Q
    ||||||||||| |||||| ||| |||||||||| || ||| |||||| |||||||||| ||||||  ||||   || ||||| ||  |||||||||| ||    
T  35960365 tatttctataataaaagataaaataaagtcaaacta-tttcatataaactataagttgatttcataagctatcctggaaagcgtaaagaaataagctaaa 35960463  T
Q  212 aacaacttatgaacat 227  Q
    |||| |||||| ||||    
T  35960464 aacatcttatggacat 35960479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 37386566 - 37386613
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataag 159  Q
    ||||||||||| |||||||||||||||| |||| |||||| |||||||    
T  37386566 tatttctataataaaagaaaaattaaaggcaaactattttcatataag 37386613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 221
Target Start/End: Original strand, 39607511 - 39607546
Alignment:
Q  186 tgaaaagcttatcgaaataagctgaaaacaacttat 221  Q
    |||| |||||||||||||||||||||||||||||||    
T  39607511 tgaagagcttatcgaaataagctgaaaacaacttat 39607546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 6738541 - 6738460
Alignment:
Q  97 tacttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataa--gctataagttgttttcat 176  Q
    ||||||||| |||| |||||| |||| |||||| ||| |||||||||||| |||| || |||  |||||||| |||||||||    
T  6738541 tacttatgtataagctatttcaataataaaagacaaaataaagtcaaattcttttcatctaaatgctataagctgttttcat 6738460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 12975298 - 12975407
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 211  Q
    |||| ||||||||||  | ||| |||| ||||||| |||| |||||||||||||| ||| |||||  ||||  ||| | ||||||| | |||||| ||||    
T  12975298 tattcctataacaaagaataaaataaaatcaaattgttttcatataagctataagctgtgttcataagctatcttggagagcttat-ggaataagttgaa 12975396  T
Q  212 aacaacttatg 222  Q
    |||||||||||    
T  12975397 aacaacttatg 12975407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 213
Target Start/End: Original strand, 29588818 - 29588931
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| |||| |||||||||||||||| | ||| ||| |  ||||| |||| |||||||||||||  ||||||| |  ||||  ||||| || ||||     
T  29588818 cttatgtataagctatttctataacaaaatataaaataatga-aaattgttttcatataagctataaagtgttttcgtaagctatgttgaagagtttatg 29588916  T
Q  199 gaaataagctgaaaa 213  Q
    |||||||||||||||    
T  29588917 gaaataagctgaaaa 29588931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 32059397 - 32059363
Alignment:
Q  193 cttatcgaaataagctgaaaacaacttatgaacat 227  Q
    |||||||||||||||||||||||||| ||||||||    
T  32059397 cttatcgaaataagctgaaaacaactcatgaacat 32059363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 213
Target Start/End: Original strand, 32172591 - 32172705
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| |||  |||||||| ||||||||| ||| | ||||||| || |||  |||||||||||||| |||||||||  ||||   |||| | || ||     
T  32172591 cttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatcatgaagaactaatg 32172690  T
Q  199 gaaataagctgaaaa 213  Q
    |||||||||||||||    
T  32172691 gaaataagctgaaaa 32172705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 36539684 - 36539758
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    ||||||| |||| ||||| | || ||||||| ||| |||||||||  | |||| |||||||||||||||||||||    
T  36539684 cttatgtgtaagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctataagttgtttt 36539758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 40452229 - 40452307
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatc 177  Q
    ||||||| |||| |||||||||| ||||  | ||| |||||| ||||||||||  | ||||||||||| ||||||||||    
T  40452229 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgttttcatc 40452307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 7096259 - 7096214
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaa 144  Q
    ||||||| |||| |||||||||||||||||| ||| ||||||||||    
T  7096259 cttatgtataagctatttctataacaaaagataaaataaagtcaaa 7096214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 14599438 - 14599362
Alignment:
Q  98 acttatgtctaagttatttctataacaaaa--gaaaaattaaagtcaaattatttttatataagctataagttgttt 172  Q
    |||||||| |||| ||||||||||||||||  || ||| | |||||||| | |||| ||||||| ||||||||||||    
T  14599438 acttatgtttaagctatttctataacaaaactgataaaattaagtcaaactgttttcatataagttataagttgttt 14599362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 18857524 - 18857455
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| |||||| |||||| | || ||| |||||||||||| ||||| ||||| ||||||| |||||||||    
T  18857524 taagctatttcaataacacacgataaaataaagtcaaattgtttttctataatctataagctgttttcat 18857455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 222
Target Start/End: Original strand, 36639462 - 36639583
Alignment:
Q  101 tatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcga 200  Q
    ||||||||| |||| | |||||||||||| ||| |||| ||||| | |||| ||| ||| ||||   |||||||||  ||||  ||||| |||||||  |    
T  36639462 tatgtctaatttatctttataacaaaagataaaataaaatcaaaatgttttcatacaagttatagactgttttcataagctatcttgaagagcttatgaa 36639561  T
Q  201 aataagctgaaaacaacttatg 222  Q
    ||||||  ||||||||||||||    
T  36639562 aataagaggaaaacaacttatg 36639583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 40097533 - 40097461
Alignment:
Q  101 tatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    ||||| |||||||||||||||||| |||| ||| || ||| ||||| ||||| | ||| |||||||||||||||    
T  40097533 tatgtataagttatttctataacagaagataaaatagagttaaattgttttt-tgtaatctataagttgttttc 40097461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 6593252 - 6593351
Alignment:
Q  113 atttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaa 212  Q
    ||||||||||||||||| ||| |||||| |||||| || | |||| |||||||| |||||| ||  ||||| ||  | |||||||  |||||||||||||    
T  6593252 atttctataacaaaagataaaataaagttaaatta-ttctgtataggctataagctgttttgataagctaccttagagagcttatgaaaataagctgaaa 6593350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 9927524 - 9927596
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttt 172  Q
    |||||| |||||||||| ||||  |||||| ||| | | |||||||| |||| |||||||| |||||||||||    
T  9927524 ttatgtataagttatttgtatagtaaaagataaaattacgtcaaattgttttcatataagcgataagttgttt 9927596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 11615531 - 11615567
Alignment:
Q  191 agcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  11615531 agcttatggaaataagctgaaaacagcttatgaacat 11615567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Complemental strand, 16457645 - 16457617
Alignment:
Q  199 gaaataagctgaaaacaacttatgaacat 227  Q
    |||||||||||||||||||||||||||||    
T  16457645 gaaataagctgaaaacaacttatgaacat 16457617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 31208419 - 31208463
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttt 151  Q
    ||||||||||||||||||||| | ||||||| |||||||| ||||    
T  31208419 taagttatttctataacaaaatataaattaacgtcaaattttttt 31208463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 37929824 - 37929796
Alignment:
Q  194 ttatcgaaataagctgaaaacaacttatg 222  Q
    |||||||||||||||||||||||||||||    
T  37929824 ttatcgaaataagctgaaaacaacttatg 37929796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 40048412 - 40048360
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttt 151  Q
    ||||||| |||||| |||||||||||||||| ||| |||||| | ||||||||    
T  40048412 cttatgtataagttgtttctataacaaaagataaaataaagttatattatttt 40048360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 27514 - 27636
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| |||||||||||||||||| |||| ||| |||||||||||| |||| |||||| |||||||||||||||||   |||  |||  |||| | |     
T  27514 cttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatcttggtaagcgtgtg 27613  T
Q  199 gaaataagctgaaaacaacttat 221  Q
    |||||||||||||||||||||||    
T  27614 gaaataagctgaaaacaacttat 27636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 49060479 - 49060555
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| |||||||    
T  49060479 ttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataagttattttcat 49060555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 44241800 - 44241911
Alignment:
Q  101 tatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcga 200  Q
    ||||| ||||||||||||||||||| ||| ||| |||||| || | |||||| ||||| |||||||||||||||||  ||||  ||||| ||||||| ||    
T  44241800 tatgtataagttatttctataacaacagataaaataaagttaact-atttttgtataacctataagttgttttcataagctatcttgaatagcttataga 44241898  T
Q  201 aataagctgaaaa 213  Q
    |||||||||||||    
T  44241899 aataagctgaaaa 44241911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 44151592 - 44151484
Alignment:
Q  119 ataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaact 218  Q
    ||||||||||| | | |||||| ||| | |||  ||||||||||||||||||||||||   |||  ||||||||||||| ||||||||||||||||| ||    
T  44151592 ataacaaaagatagaataaagtaaaactgtttccatataagctataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatct 44151493  T
Q  219 tatgaacat 227  Q
    |||| ||||    
T  44151492 tatggacat 44151484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 226
Target Start/End: Original strand, 28165029 - 28165156
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| |||||| |||||||||||||||| ||| | |||||||||| |||| |||||||||||||  ||| || ||  ||||   || | |||||||     
T  28165029 cttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagagcttatg 28165128  T
Q  199 gaaataagctgaaaacaacttatgaaca 226  Q
    |||||||| |||||||| ||||||||||    
T  28165129 gaaataagttgaaaacagcttatgaaca 28165156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 227
Target Start/End: Complemental strand, 48157251 - 48157124
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcg 199  Q
    |||||| ||| |||||||||||| |||||| ||| |||||| ||||| |||| ||||||||||||| |||||||||   |||| |  | | | ||||| |    
T  48157251 ttatgtataacttatttctataataaaagataaaataaagtgaaattgttttaatataagctataatttgttttcacaagctattcgggagatcttatgg 48157152  T
Q  200 aaataagctgaaaacaacttatgaacat 227  Q
    |||||||||||||||| |||||| ||||    
T  48157151 aaataagctgaaaacagcttatggacat 48157124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 1417215 - 1417279
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||| |||||||||||| ||| |||||||||||| |||| |||||||| |||||||||||||||    
T  1417215 tatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcat 1417279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 5373163 - 5373239
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    ||||||| || | |||||||||||||||||| ||| ||||||| ||  ||||||||||||| |||||||||||||||    
T  5373163 cttatgtatatgctatttctataacaaaagataaaataaagtccaaacatttttatataagttataagttgttttca 5373239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 24909632 - 24909679
Alignment:
Q  129 aaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  24909632 aaaaagtaaagtcaaattattttcatataagctataagttgttttcat 24909679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 1432099 - 1432019
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaatt---aaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| ||||||||||||||||||||||| ||| |   ||||| |||||||||| ||||||||||| || |||||||||    
T  1432099 cttatgtataagttatttctataacaaaagataaaataaaaaagttaaattattttcatataagctatcagctgttttcat 1432019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 23918896 - 23918961
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataa 165  Q
    |||||| |||||||| ||||| |||||||| ||| |||||||||||| |||| |||||||||||||    
T  23918896 ttatgtgtaagttatctctattacaaaagataaaataaagtcaaattgttttcatataagctataa 23918961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 24895325 - 24895370
Alignment:
Q  130 aaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  24895325 aaaagtaaagtcaaattattttcatataagctataagttgttttca 24895370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 42656452 - 42656517
Alignment:
Q  98 acttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctat 163  Q
    |||||| | |||| |||||||||||||||||| ||| ||||||||||| |||||| ||||||||||    
T  42656452 acttatatataagctatttctataacaaaagataaaataaagtcaaatcatttttgtataagctat 42656517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 47004033 - 47004102
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| |||||||||||||| ||| ||| |||||||||| ||||||||||| | ||||||| |||||||||    
T  47004033 taagctatttctataacaatagataaaataaagtcaaactatttttatatgaactataagctgttttcat 47004102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 5010591 - 5010527
Alignment:
Q  108 aagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttt 172  Q
    ||||||||| | |||||||| | ||| |||||| |||||||||||||||||| ||||||||||||    
T  5010591 aagttatttatgtaacaaaatataaaataaagtgaaattatttttatataaggtataagttgttt 5010527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 15075205 - 15075089
Alignment:
Q  112 tatttctataacaaaaga-aaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctga 210  Q
    |||||||||||||||||| |||||| ||   ||| |||||||||||||| |||||||| |||||||   |||| ||  | ||||||| |||||||||| |    
T  15075205 tatttctataacaaaagataaaatttaatcaaaactatttttatataagttataagttattttcataaactaccttagagagcttatggaaataagctaa 15075106  T
Q  211 aaacaacttatgaacat 227  Q
    ||||| |||||| ||||    
T  15075105 aaacagcttatgtacat 15075089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 18749928 - 18749880
Alignment:
Q  113 atttctataacaaaagaaaaattaaagtcaaattatttttatataagct 161  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  18749928 atttctataacaaaagataaagtaaagtcaaactatttttatataagct 18749880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 30456569 - 30456505
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||| ||||||||| ||| |||||||||||| |||| ||||||| ||||||| ||||||||    
T  30456569 tatttctaaaacaaaagataaaataaagtcaaattgttttcatataagttataagtggttttcat 30456505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 39591591 - 39591539
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataag 159  Q
    ||||||||||||||||||||||| ||| |||||||||||| |||| |||||||    
T  39591591 taagttatttctataacaaaagataaaataaagtcaaattgttttcatataag 39591539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 40689105 - 40689041
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||| ||||||| ||| |||||| |||||||||| |||||||||||||| ||| |||||    
T  40689105 tatttctatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcat 40689041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 45813304 - 45813236
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    |||| |||||||||| ||||||| ||| ||||||||| || |||| |||||| ||||||||||||||||    
T  45813304 taagctatttctataccaaaagataaaataaagtcaacttgttttcatataatctataagttgttttca 45813236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 5006639 - 5006564
Alignment:
Q  101 tatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||| |||| |||| ||||||||||||| ||| |||||||||| | |||| ||||||| ||||| ||||||||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcat 5006564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 35536045 - 35536112
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataag 166  Q
    ||||||| |||| ||||||||||||| |||| ||| |||||||||||| |||| ||||||| ||||||    
T  35536045 cttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataagttataag 35536112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 25511577 - 25511639
Alignment:
Q  111 ttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    |||||||||||||||||||  || ||||||||| || |||||||||||| |||||||| ||||    
T  25511577 ttatttctataacaaaagatgaaataaagtcaatttttttttatataagatataagttttttt 25511639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 21853240 - 21853175
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttt 172  Q
    |||||||||||||| |||||||| ||| |||||| ||||| ||| |||||| || |||||||||||    
T  21853240 taagttatttctattacaaaagataaaataaagttaaattgtttgtatataggcgataagttgttt 21853175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 2223087 - 2223143
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatat 156  Q
    |||||| |||| |||||||||||||||||| |||  ||||||||||| |||||||||    
T  2223087 ttatgtataagctatttctataacaaaagataaagaaaagtcaaattgtttttatat 2223143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 9527205 - 9527145
Alignment:
Q  116 tctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||||| | | |||||||||| | |||| |||||| |||||||||||||||||    
T  9527205 tctataacaaaagatataataaagtcaaactgttttcatataaactataagttgttttcat 9527145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 12110311 - 12110375
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||| ||| |||| ||| |||||||||||| ||||  ||||||||||||| |||||||||    
T  12110311 tatttctattacacaagataaaataaagtcaaattgttttggtataagctataagctgttttcat 12110375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 30496655 - 30496719
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||||||| | ||| |||||||||||| ||||  ||||| ||||| |||||||||||    
T  30496655 tatttctataacaaaatataaaataaagtcaaattgttttcgtataacctataggttgttttcat 30496719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 34083644 - 34083580
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||| ||||||| ||| |||||| ||||| ||| | ||||||||||||| |||||||||    
T  34083644 tatttctatagcaaaagataaaataaagttaaattgtttgtgtataagctataagctgttttcat 34083580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 36874098 - 36874022
Alignment:
Q  98 acttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    |||||||| |||| ||||||||||| ||| || ||| |||| |  |||||||||  |||||||||||||||||||||    
T  36874098 acttatgtataagctatttctataagaaatgataaaataaatttgaattattttcttataagctataagttgttttc 36874022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 3610872 - 3610797
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    ||||||| |||| |||||||| ||||||||| ||| | ||| |||| | ||||  |||||||||||||||||||||    
T  3610872 cttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttc 3610797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 7623078 - 7623153
Alignment:
Q  101 tatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||| |||||||||| |||||||||||  ||| ||||||| || | |||||||||||||| |||| | |||||||    
T  7623078 tatgtataagttatttttataacaaaaggtaaaataaagtccaactctttttatataagctgtaagctattttcat 7623153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 28613665 - 28613594
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtt 171  Q
    |||||| |||| ||||| |||||||||||| |||  ||||| ||||| ||||| |||||| |||||||||||    
T  28613665 ttatgtataagctatttttataacaaaagataaaacaaagttaaattgtttttgtataagttataagttgtt 28613594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 29286814 - 29286857
Alignment:
Q  184 tttgaaaagcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||    
T  29286814 tttgaaaagcttatgtaaataagctgaaaacaactgatgaacat 29286857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 29769056 - 29768988
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttg 169  Q
    ||||||| | |||||| ||| |||||||| ||||  |||||||||| | ||||||||||||||||||||||    
T  29769056 cttatgtatgagttatgtctgtaacaaaacaaaa--taaagtcaaaatgtttttatataagctataagttg 29768988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 31002722 - 31002773
Alignment:
Q  122 acaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    |||||||| ||| |||||||||| |||||| |||||||||||||| ||||||    
T  31002722 acaaaagataaaataaagtcaaaatattttcatataagctataagctgtttt 31002773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 46081979 - 46082097
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaat-tatttttatataagctataagttgttttcatcg--gctactttgaaaagcttatcgaaat 203  Q
    |||| |||||||||||| ||||  |||  |||||||||  | |||| ||||||| |||||||||||||||| |  |||| | || | |||||||  ||||    
T  46081979 taagctatttctataacgaaagttaaaacaaagtcaaaactgttttcatataagttataagttgttttcatagacgctattctggagagcttatgaaaat 46082078  T
Q  204 aagctgaaaacaacttatg 222  Q
    |||||||||||||||||||    
T  46082079 aagctgaaaacaacttatg 46082097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 227
Target Start/End: Original strand, 10190744 - 10190861
Alignment:
Q  109 agttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagct 208  Q
    ||||||||||||||||| | | |||| ||||||||| | |||| |||||| || ||| ||||||||||   ||| | | |||||||||| |||||| | |    
T  10190744 agttatttctataacaagatagaaat-aaagtcaaactgttttcatataaactgtaaattgttttcataaactattcttaaaagcttatggaaatacgtt 10190842  T
Q  209 gaaaacaacttatgaacat 227  Q
    ||||||  |||||||||||    
T  10190843 gaaaaccgcttatgaacat 10190861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 12835056 - 12835002
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataag 166  Q
    |||||||| ||||||||| ||| |||||||||||| |||| |||| |||||||||    
T  12835056 tatttctacaacaaaagataaaataaagtcaaattgttttcatattagctataag 12835002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 27121718 - 27121656
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagct 161  Q
    ||||||| |||| ||||||||||| ||| || ||| |||||||||||| |||| |||||||||    
T  27121718 cttatgtataagatatttctataataaatgataaaataaagtcaaattgttttcatataagct 27121656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 33894561 - 33894634
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    ||||||| |||| |||||||||||||||||| ||| | |||||||| | |||| ||||||||| || ||||||||    
T  33894561 cttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcatataagctttatgttgtttt 33894634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 221
Target Start/End: Original strand, 44821933 - 44822019
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttat 221  Q
    |||||||||||| ||||| |||||| |||||| |||||||||  |||| | || | | |||||  ||||||| ||||||||||||||    
T  44821933 taaagtcaaattgtttttgtataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaacaacttat 44822019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 47046229 - 47046163
Alignment:
Q  110 gttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||| |||||| || ||| |||||||||||| |||| |||||||||   ||||||||||||    
T  47046229 gttatttctacaacaaaggataaaataaagtcaaattgttttcatataagctccgagttgttttcat 47046163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 3501098 - 3501021
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| |||| || || ||||| |||||| ||| ||||||||||| ||||| ||||||  |||||||||| |||||    
T  3501098 cttatgtataagctaattatataataaaagataaaataaagtcaaatcattttcatataaaatataagttgtattcat 3501021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 7453515 - 7453454
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaa-ttatttttatataagctataagttgttttc 174  Q
    |||||||| ||||||| ||| |||||||||| || |||| |||||||||||||| |||||||    
T  7453515 tttctatagcaaaagataaaataaagtcaaatttgttttcatataagctataagatgttttc 7453454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 38010664 - 38010729
Alignment:
Q  111 ttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| || ||||||||| |||  |||| |||||| |||| |||||||||||||| |||||||||    
T  38010664 ttatttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcat 38010729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 40009408 - 40009481
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttt 172  Q
    ||||||| |||| | ||| |||||||||||| ||| |||||| ||||| |||||  |||| |||||||||||||    
T  40009408 cttatgtataagctgtttttataacaaaagacaaaataaagttaaattgtttttccataatctataagttgttt 40009481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 503450 - 503414
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaa 143  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  503450 taagttgtttctataataaaagaaaaattaaagtcaa 503414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 1373663 - 1373595
Alignment:
Q  108 aagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||| ||| |||||||| |||||||||||||| | |||| |||||  ||||||  |||||||||    
T  1373663 aagttatttttatgacaaaagataaattaaagtcaaacttttttcatatagtctataacctgttttcat 1373595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Complemental strand, 9423626 - 9423598
Alignment:
Q  199 gaaataagctgaaaacaacttatgaacat 227  Q
    |||||||||||||||||||||||||||||    
T  9423626 gaaataagctgaaaacaacttatgaacat 9423598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 20553133 - 20553169
Alignment:
Q  191 agcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  20553133 agcttatggaaataatctgaaaacaacttatgaacat 20553169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Complemental strand, 20888426 - 20888398
Alignment:
Q  199 gaaataagctgaaaacaacttatgaacat 227  Q
    |||||||||||||||||||||||||||||    
T  20888426 gaaataagctgaaaacaacttatgaacat 20888398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 22759125 - 22759201
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||| ||||| |||||||||||| ||| |||||  ||||| |||| |||||||||| ||| || ||||||    
T  22759125 ttatgtttaagctatttgtataacaaaagataaaataaaggaaaattgttttcatataagctaaaagctgatttcat 22759201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 27481425 - 27481349
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||| ||||||||||||||| || |||   |||||||| | |||  |||||||||||||||| |||||||    
T  27481425 ttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagttattttcat 27481349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 31338471 - 31338519
Alignment:
Q  124 aaaagaaaaattaaagtcaaattatttttatataagctataagttgttt 172  Q
    |||||| ||| |||||||||| | |||||||||||| ||||||||||||    
T  31338471 aaaagataaaataaagtcaaactgtttttatataagttataagttgttt 31338519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 31341132 - 31341192
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataag 159  Q
    ||||||| |||| ||||| |||||||||||| ||| |||||||||| |  |||||||||||    
T  31341132 cttatgtataagctatttgtataacaaaagataaaataaagtcaaactggttttatataag 31341192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 35267392 - 35267428
Alignment:
Q  191 agcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  35267392 agcttatagaaataagctgaaaacaacctatgaacat 35267428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 44910555 - 44910619
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||| ||||||| ||| |||||||||| | |||| | | |||||| |||||||||||||    
T  44910555 tatttctatatcaaaagagaaaataaagtcaaacttttttcacacaagctaaaagttgttttcat 44910619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 45777284 - 45777228
Alignment:
Q  118 tataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    |||||||||||| ||| | |||||||| | |||| |||||| |||||||||||||||    
T  45777284 tataacaaaagataaaattaagtcaaactgttttcatataaactataagttgttttc 45777228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 47177582 - 47177650
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    |||| |||||||||| ||||| | |||  ||||| ||||| |||| |||||||||||||| ||||||||    
T  47177582 taaggtatttctatatcaaaatacaaaacaaagttaaattgttttcatataagctataagctgttttca 47177650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 229
Target Start/End: Complemental strand, 28769471 - 28769341
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| |||| |||| ||||||||||  | ||| | |||||||| ||||||  ||||||||||||| |||||||||  |||| |||| | || ||||     
T  28769471 cttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgttttcataagctattttggagagtttatg 28769372  T
Q  199 gaaataagctgaaaacaacttatgaacatat 229  Q
    |||||||||||||||||||||||| ||||||    
T  28769371 gaaataagctgaaaacaacttatggacatat 28769341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 42597337 - 42597416
Alignment:
Q  97 tacttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||| |||| |||||||||||||||||| ||| |||||| ||||| |||| ||  ||||||||||||||||||||    
T  42597337 tacttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcat 42597416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 1470985 - 1470911
Alignment:
Q  102 atgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| |||| ||||||||||| |||||| ||| ||||||||||||| ||| |||||||||||||| |||||||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgttttcat 1470911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 38561672 - 38561741
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||| |||||||||||| ||| |||||||||| ||||||||| ||  |||||||||||||||||    
T  38561672 taagttatttatataacaaaagataaaataaagtcaaactatttttatctatactataagttgttttcat 38561741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 4762457 - 4762569
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||||||||||||| ||||||||  || ||||||||  || |||||||| |||||  |||||||||||||  ||||  ||||| |||||||  |||||||    
T  4762457 taagttatttctattacaaaagatgaaataaagtca--ttttttttataaaagcttcaagttgttttcataagctatcttgaagagcttatgtaaataag 4762554  T
Q  207 ctgaaaacaacttat 221  Q
    |||||||||| ||||    
T  4762555 ctgaaaacaatttat 4762569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 11056786 - 11056723
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    ||||||||||||||||| |||| ||||||  || |||||| |||||||||||||||||||||||    
T  11056786 tatttctataacaaaaggaaaaataaagttgaactattttcatataagctataagttgttttca 11056723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 12361128 - 12361207
Alignment:
Q  97 tacttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| | ||||||||||||||||  ||||| ||| | |||||||||| |||| |||||||||||||| |||||||||    
T  12361128 tacttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctataagctgttttcat 12361207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 37776800 - 37776714
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttat 221  Q
    |||||||||||| | ||||||||| ||||||||||||| |||| || |  ||||| || |||| |||||||||||| ||||||||||    
T  37776800 taaagtcaaattgtgtttatataaactataagttgtttacatcagcaatcttgaagagtttatggaaataagctgataacaacttat 37776714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 4558737 - 4558858
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcg 199  Q
    |||||| |||| ||||||||||| |||||| ||| |||||| |||||||||| ||||| |||||||| ||||| |||  ||||   |  | ||||||| |    
T  4558737 ttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagagcttatgg 4558836  T
Q  200 aaataagctgaaaacaacttat 221  Q
    |||||| || ||||||||||||    
T  4558837 aaataaactaaaaacaacttat 4558858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 7645955 - 7646032
Alignment:
Q  138 agtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaaca 215  Q
    ||||||||| |||| || |||||||||||||||||||||  ||||   || ||||||||| |||||||||||||||||    
T  7645955 agtcaaattgttttcatgtaagctataagttgttttcataagctaacctgtaaagcttatggaaataagctgaaaaca 7646032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 26820145 - 26820214
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||  ||||| |||||||  ||||||||    
T  26820145 taagttatttctataacaaaagataaaataaagtcaaactattttgttataaactataagccgttttcat 26820214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 2482830 - 2482927
Alignment:
Q  126 aagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaac 225  Q
    |||| ||| |||||||||| | ||||| ||||||||||||| |||||||||  ||||  ||| | | ||||| ||||||||||||||||| |||||||||    
T  2482830 aagataaaataaagtcaaaatgtttttgtataagctataagctgttttcat--gctatcttggataacttatagaaataagctgaaaacagcttatgaac 2482927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 34770843 - 34770907
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| || |||||||| ||| |||||||||||| |||| || |||||||||||||||||||||    
T  34770843 tatttccattacaaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcat 34770907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 215
Target Start/End: Complemental strand, 39561665 - 39561557
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||| |||||||||||||||  | ||| ||||||| | || |||| || ||| ||||||||||||||| |  ||||   |||||||||||| ||||||||    
T  39561665 taagctatttctataacaaagtataaaataaagtcgatttgttttcatctaaactataagttgttttcgtaagctatcatgaaaagcttatggaaataag 39561566  T
Q  207 ctgaaaaca 215  Q
    |||||||||    
T  39561565 ctgaaaaca 39561557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 1561217 - 1561338
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggcta--ctttgaaaagctta 196  Q
    ||||||| ||||||||||||||||| |||||     |||| ||||||| |||| |||||||||| |||||||||||||  ||||  || |||| ||| ||    
T  1561217 cttatgtataagttatttctataacgaaaga-----taaactcaaattgttttaatataagctacaagttgttttcataagctatcctgtgaagagcata 1561311  T
Q  197 tcgaaataagct-gaaaacaacttatg 222  Q
    | |||||||| | ||||||||||||||    
T  1561312 tagaaataagttggaaaacaacttatg 1561338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 213
Target Start/End: Complemental strand, 6509425 - 6509321
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||||||| |||||||||| | ||||  |||||||||||| | ||||||||||||||||| |||||||||  ||||   || | ||||||| ||||||||    
T  6509425 taagttatatctataacaagataaaa--taaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagcttattgaaataag 6509328  T
Q  207 ctgaaaa 213  Q
     ||||||    
T  6509327 gtgaaaa 6509321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 45071163 - 45071214
Alignment:
Q  122 acaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    |||||||| ||| |||||||||||| ||||||||||||||||||| ||||||    
T  45071163 acaaaagacaaaataaagtcaaattgtttttatataagctataagctgtttt 45071214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 2091740 - 2091824
Alignment:
Q  140 tcaaattatttttatataagctataagttgttttcatcggcta--ctttgaaaagcttatcgaaataagctgaaaacaacttatg 222  Q
    ||||||| |||| |||||||||| |||||||||||||  ||||  || |||| ||| ||| |||||||| |||||||||||||||    
T  2091740 tcaaattgttttaatataagctacaagttgttttcataagctatcctgtgaagagcatatagaaataagttgaaaacaacttatg 2091824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 3945220 - 3945281
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagtt 168  Q
    ||||||||||| ||||||||||| ||| |||| | ||  |||||||||||||||||||||||    
T  3945220 taagttatttcaataacaaaagataaaataaaatgaagctatttttatataagctataagtt 3945281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 29973027 - 29973096
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| ||||||| ||||| |||  ||| |||||||||| |||||| | ||||||||||||||||||||||    
T  29973027 taagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataagttgttttcat 29973096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 31862439 - 31862508
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||| ||||||||||| ||  |||||||||| |||| |  ||||||||||||| |||||||||    
T  31862439 taagttatttcaataacaaaagataatataaagtcaaactattctcgtataagctataagatgttttcat 31862508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 35869775 - 35869852
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| ||||  ||||||| ||||||| | ||| |||| |||||  ||||| ||||||||||||||||||||||||    
T  35869775 cttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttgttttcat 35869852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 213
Target Start/End: Complemental strand, 6864587 - 6864477
Alignment:
Q  106 ctaagttatttctataacaaaa---gaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaa 202  Q
    ||||| ||||||||||||| ||   || ||| |||||||||| |||||| || |||| ||||||||||||||||  |||| |||| | |||||   ||||    
T  6864587 ctaagctatttctataacataaaaggataaaataaagtcaaactattttcatgtaagttataagttgttttcataagctattttggagagcttgaggaaa 6864488  T
Q  203 taagctgaaaa 213  Q
    |||||||||||    
T  6864487 taagctgaaaa 6864477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 27728140 - 27728076
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||| |||||| ||| |||||||||| |||||| ||||||  ||| ||||||||||||    
T  27728140 tatttctataaaaaaagataaaataaagtcaaactattttcatataaagtattagttgttttcat 27728076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 29699192 - 29699268
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    |||||||  |||||||||||||||||||||| ||| |||||||||| | || | || |||| |||||| ||||||||    
T  29699192 cttatgtacaagttatttctataacaaaagataaaataaagtcaaaatgttgtcatctaagttataagctgttttca 29699268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 176
Target Start/End: Complemental strand, 3537149 - 3537086
Alignment:
Q  113 atttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||| ||||||| ||| |||||||||||| ||||  ||||||||||| |||||| ||||    
T  3537149 atttctatagcaaaagataaaataaagtcaaattgttttcgtataagctataggttgttatcat 3537086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 215
Target Start/End: Complemental strand, 7918892 - 7918789
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 211  Q
    |||||||||| | ||| | ||| |||||| ||||| ||||  | |||||||||||||||||||||  ||||  ||| | ||||| | |||||||||||||    
T  7918892 tatttctatatcgaaaaataaaataaagttaaatttttttcttgtaagctataagttgttttcataagctatcttgtagagcttgtggaaataagctgaa 7918793  T
Q  212 aaca 215  Q
    ||||    
T  7918792 aaca 7918789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 10075681 - 10075606
Alignment:
Q  101 tatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||| |||| ||||| ||||| ||||  | ||||||||||||| |||||||||||||| |||||| | |||||||    
T  10075681 tatgtataagctatttgtataataaaaacataattaaagtcaaactatttttatataagttataagctattttcat 10075606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 31884534 - 31884609
Alignment:
Q  101 tatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||| ||||||||||||||||||||| | ||| | || |  |||| |||| ||||||||||||| ||||||||||    
T  31884534 tatgtataagttatttctataacaaaatataaaatcaaattgaattgttttcatataagctataaattgttttcat 31884609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 3269646 - 3269708
Alignment:
Q  113 atttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    |||||||||||| |||| ||| ||||||| ||||  |||| ||||| ||||||||||||||||    
T  3269646 atttctataacacaagataaaataaagtcgaattgattttgtataatctataagttgttttca 3269708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 11188287 - 11188221
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataa 165  Q
    ||||||| |||||| |||||||||||||||| ||| ||||  |||| ||||||||||| || |||||    
T  11188287 cttatgtataagttgtttctataacaaaagataaaataaaaccaaactatttttatattagttataa 11188221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 29262991 - 29262929
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||| | |||| ||| ||||||||||||||||| ||||||||| |||| || ||||||    
T  29262991 tttctataatagaagataaaataaagtcaaattattttcatataagctgtaagctgatttcat 29262929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 9928195 - 9928232
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaa 137  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  9928195 ttatgtataagttatttctataacaaaagataaattaa 9928232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 11415128 - 11415169
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||||||||||||||| |||| | |||||||||    
T  11415128 taaagtcaaattatttttatataagttatacgctgttttcat 11415169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 12225031 - 12224974
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatat 156  Q
    ||||||| |||||||||||||  |||||||| ||| |||||||||| |||||| ||||    
T  12225031 cttatgtataagttatttctaagacaaaagataaaataaagtcaaactattttcatat 12224974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 14482140 - 14482193
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattattttt 152  Q
    ||||||| |||  |||||||||||||||||| ||| |||||||||||| |||||    
T  14482140 cttatgtataaactatttctataacaaaagataaaataaagtcaaattgttttt 14482193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 16211015 - 16210942
Alignment:
Q  102 atgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    |||| |||| ||||||||||  ||| || ||| |||||| | ||| |||| |||||||||||||||||||||||    
T  16211015 atgtataagctatttctatagtaaatgataaaataaagttacattgttttcatataagctataagttgttttca 16210942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 16733980 - 16734041
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    |||||||||| ||||||| ||| |||| | ||||| ||||| |||| |||||||||||||||    
T  16733980 tatttctatagcaaaagataaactaaacttaaattgtttttgtatatgctataagttgtttt 16734041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 25867037 - 25867086
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagct 161  Q
    ||||||||||||||||||  || |||||||||| |||||| |||||||||    
T  25867037 tatttctataacaaaagatgaaataaagtcaaaatattttcatataagct 25867086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 30628026 - 30627957
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| ||||||| |||||||||| ||| |||| | ||||| ||| | | |||||||||||||||||||||    
T  30628026 taagctatttctgtaacaaaagataaaataaaataaaattgtttatgtgtaagctataagttgttttcat 30627957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 30918143 - 30918176
Alignment:
Q  191 agcttatcgaaataagctgaaaacaacttatgaa 224  Q
    ||||||| ||||||||||||||||||||||||||    
T  30918143 agcttatggaaataagctgaaaacaacttatgaa 30918176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 144
Target Start/End: Complemental strand, 40728542 - 40728505
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaa 144  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  40728542 taagttatttctataacaaaagataaaataaagtcaaa 40728505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 1112791 - 1112867
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    ||||||| || | |||||||||||||||||| ||| ||| || ||||| |||| | ||||||||||||  |||||||    
T  1112791 cttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttcacataagctataagcggttttca 1112867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 7853359 - 7853411
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataag 166  Q
    |||||||||||||||| | | ||||||||||||  ||||||||||| ||||||    
T  7853359 tttctataacaaaagatataataaagtcaaattgattttatataaggtataag 7853411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 8799354 - 8799394
Alignment:
Q  110 gttatttctataacaaaagaaaaattaaagtcaaattattt 150  Q
    |||||||||||||||||||| ||| |||||||||| |||||    
T  8799354 gttatttctataacaaaagataaaataaagtcaaactattt 8799394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 11000621 - 11000581
Alignment:
Q  186 tgaaaagcttatcgaaataagctgaaaacaacttatgaaca 226  Q
    |||| ||||||| ||||||||||||| ||||||||||||||    
T  11000621 tgaagagcttatggaaataagctgaagacaacttatgaaca 11000581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 11795030 - 11795146
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| |||| | ||||||| |||||| | | | |||||||| | | |||| ||||||| |||||| || ||||||  |||| | || | |||||||     
T  11795030 cttatgtataagctttttctatgacaaaacatacaataaagtcacactgttttcatataagttataagctgatttcataagctattatggagagcttatg 11795129  T
Q  199 gaaataagctgaaaaca 215  Q
    |||||||||||||||||    
T  11795130 gaaataagctgaaaaca 11795146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 13459585 - 13459660
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||| ||||||||| | |||||| ||| | ||||||| || ||| | |||||||||||||||||||||||    
T  13459585 ttatgtataagctatttctatgataaaagataaaatgaagtcaactt-tttgtgtataagctataagttgttttcat 13459660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 24558812 - 24558868
Alignment:
Q  120 taacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||| |||   |||| ||||||||||  |||||||||||||||||||||||    
T  24558812 taacaaaagataaaccgaagttaaattattttcgtataagctataagttgttttcat 24558868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 26215434 - 26215486
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttt 151  Q
    ||||||| |||| |||||||||||||||||| ||| |||||| ||| ||||||    
T  26215434 cttatgtataagctatttctataacaaaagataaaataaagttaaactatttt 26215486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 33714352 - 33714241
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaa 213  Q
    ||||||||||| |||| ||| |||||||||| ||||||  || || ||||||| | |||||||  ||||  | | | |||||||  ||||||||||||||    
T  33714352 tttctataacacaagataaaataaagtcaaactattttg-tacaatctataagctattttcataagctatctgggagagcttataaaaataagctgaaaa 33714254  T
Q  214 caacttatgaaca 226  Q
    || ||||||||||    
T  33714253 cagcttatgaaca 33714241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 37461082 - 37461157
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| ||||||||||||| |||||| |  |||| || |||||| | || |||||||||||||| |||||||||||    
T  37461082 ttatgtgtaagttatttctacaacaaaggctaaat-aacgtcaaactgttattatataagctatatgttgttttcat 37461157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 38036244 - 38036128
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| |||  ||||| | |||||||| | ||| |||| ||||||| ||||| | ||||||||||  |||||| ||  ||||  ||| | |||||||     
T  38036244 cttatgtataaactatttatttaacaaaaaataaaataaattcaaattgtttttgtgtaagctataaactgttttgattagctatcttggagagcttatt 38036145  T
Q  199 gaaataagctgaaaaca 215  Q
    |||||||||||||||||    
T  38036144 gaaataagctgaaaaca 38036128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 41208831 - 41208899
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    |||||| ||||||||||||    ||||| ||||||| ||| |||| ||||||||||||| |||||||||    
T  41208831 taagttgtttctataacaacgataaaataaaagtcatattgttttcatataagctataacttgttttca 41208899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 41606943 - 41606907
Alignment:
Q  191 agcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  41606943 agcttatggaaataagctgaaaacaacttttgaacat 41606907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 42215122 - 42215086
Alignment:
Q  191 agcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    |||||||  ||||||||||||||||||||||||||||    
T  42215122 agcttatgtaaataagctgaaaacaacttatgaacat 42215086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 42370493 - 42370377
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| |||| | | ||| |||||||| | ||| |||||||||| ||||||| ||| ||||||||  |||| ||||  ||||   |||| || ||||     
T  42370493 cttatgtataagctgtatctgtaacaaaatataaagtaaagtcaaactatttttttatgagctataaactgttctcataagctatcatgaagagtttatg 42370394  T
Q  199 gaaataagctgaaaaca 215  Q
    |||||||||||||||||    
T  42370393 gaaataagctgaaaaca 42370377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 4006660 - 4006729
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| ||||||||||||||| || ||| |||||||||||| |||||||||||||||||||||||||||||    
T  4006660 taagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcat 4006729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 7785866 - 7785754
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    ||||||| || |||| ||||||| ||| |||||||||| | |||| ||||||||||||| |||| |||||  |||| |||| | ||||||| ||||||||    
T  7785866 taagttacttatataccaaaagataaaataaagtcaaactcttttcatataagctataaattgtcttcat--gctattttggagagcttatggaaataag 7785769  T
Q  207 ctgaaaacaacttat 221  Q
    |||||||||||||||    
T  7785768 ctgaaaacaacttat 7785754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 1402942 - 1403011
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| |||||||||||||||||| ||| |||||| ||| |||||| ||||||||||||| ||||||||||    
T  1402942 taagctatttctataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcat 1403011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 2514640 - 2514717
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| |||| ||||||||||| |||||| ||| |||||||||| || |||||||| ||||||||||| |||||||    
T  2514640 cttatgtataagctatttctataataaaagataaaataaagtcaaactaattttatatgagctataagttattttcat 2514717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 224
Target Start/End: Original strand, 2735015 - 2735132
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||| ||| |||||||||||||| ||| |||||| ||||||||||| ||||| ||||||| |||||||||  || |  ||||| | |||||  |||||||    
T  2735015 taagctatgtctataacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataag 2735114  T
Q  207 ctgaaaacaacttatgaa 224  Q
    | ||||||| ||||||||    
T  2735115 ccgaaaacagcttatgaa 2735132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 10452492 - 10452419
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttt 172  Q
    ||||||| |||| |||||||||||||||| | ||| |||| ||||| |||||| ||||||||||||||||||||    
T  10452492 cttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataagttgttt 10452419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 29274361 - 29274284
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| |||| |||||||||| ||||||| ||| |||||||||||| |||| |||||||||||||  |||||||||    
T  29274361 cttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcat 29274284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 24836330 - 24836262
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagtt 168  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||| ||||  ||||| |||||||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataaactataagtt 24836262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 10154174 - 10154281
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaa 213  Q
    ||||||||  |||||| ||| |||||||||| | |||| ||||||| |||||| |  |||||| |||||   |||||||||||| ||||||| |||||||    
T  10154174 tttctatagaaaaagataaaataaagtcaaactgttttcatataagttataagctactttcataggctagcatgaaaagcttatggaaataaactgaaaa 10154273  T
Q  214 caacttat 221  Q
    ||||||||    
T  10154274 caacttat 10154281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 281972 - 281858
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||| |||| ||||||||||||| ||| ||||||||| || |||| |||||||||||||| ||| |||||  ||||   |  | |||| || ||||||||    
T  281972 taagctattcctataacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaataag 281873  T
Q  207 ctgaaaacaacttat 221  Q
    |||||||||||||||    
T  281872 ctgaaaacaacttat 281858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 227
Target Start/End: Original strand, 4420607 - 4420709
Alignment:
Q  123 caaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatg 222  Q
    ||||||| ||| |||||||||| ||||||| |||||||||  |||| ||||| |  ||||  ||| | ||||||| ||||||||||||||||| ||||||    
T  4420607 caaaagataaaataaagtcaaactatttttgtataagcta--agttattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatg 4420704  T
Q  223 aacat 227  Q
    |||||    
T  4420705 aacat 4420709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 227
Target Start/End: Original strand, 6647327 - 6647453
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| ||||||||||||||||||||  ||| | ||||||||||||| ||| ||||| | |||||  |||||||||  ||||  ||  | |||||||     
T  6647327 cttatgtataagttatttctataacaaa--aaataataaagtcaaattactttaatataggttataatctgttttcataagctatcttagagagcttatg 6647424  T
Q  199 gaaataagctgaaaacaacttatgaacat 227  Q
     ||||||| |||||||| |||||||||||    
T  6647425 aaaataagttgaaaacatcttatgaacat 6647453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 229
Target Start/End: Original strand, 27893986 - 27894114
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcg 199  Q
    |||||| |||| |||||||| |||| || | ||| |||||||||||| |||| |||||| |||| ||| ||||||||  | ||  |||||||||||||      
T  27893986 ttatgtataagctatttctacaacagaatataaaataaagtcaaattgttttaatataaactattagt-gttttcataagatatcttgaaaagcttatga 27894084  T
Q  200 aaataagctgaaaacaacttatgaacatat 229  Q
    ||||||||||||||||  ||||| ||||||    
T  27894085 aaataagctgaaaacagtttatggacatat 27894114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 6310342 - 6310282
Alignment:
Q  113 atttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    |||||||||||||||||  || ||||||| |||| |||| |||||||||||||||||||||    
T  6310342 atttctataacaaaagatgaagtaaagtctaattgttttcatataagctataagttgtttt 6310282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 5328920 - 5328971
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataa 158  Q
    ||||||||||||||||||||||| ||| ||||||||||  ||||||||||||    
T  5328920 taagttatttctataacaaaagataaaataaagtcaaaccatttttatataa 5328971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 27595684 - 27595630
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagtt 168  Q
    ||||||||| |||||| ||| ||||||||||||||||| ||||||||| ||||||    
T  27595684 tttctataataaaagataaaataaagtcaaattattttcatataagctgtaagtt 27595630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 2027530 - 2027461
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| ||||| |||||||||||| ||| |||||||||| |||||| |||||| ||||||| |||| ||||    
T  2027530 taagctatttttataacaaaagataaaataaagtcaaactattttcatataacctataagctgttctcat 2027461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 2727972 - 2727911
Alignment:
Q  115 ttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||||| |||  ||| ||||||| | || ||||||||||||||||||||||||    
T  2727972 ttctataacaaaagataaacaaaaatcaaattgtattgatataagctataagttgttttcat 2727911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 6536972 - 6537013
Alignment:
Q  186 tgaaaagcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    |||| ||||||| |||||||||||||||||||||||||||||    
T  6536972 tgaagagcttatggaaataagctgaaaacaacttatgaacat 6537013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 9093680 - 9093611
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| |||||||||| ||||||| ||| |||||| ||||| ||||  ||||||||||||| |||||||||    
T  9093680 taagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcat 9093611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 11340741 - 11340680
Alignment:
Q  115 ttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||||| ||| |||||| || ||||||| ||||| ||||||||||| ||||||    
T  11340741 ttctataacaaaagataaaataaagttaatttattttcatatacgctataagttggtttcat 11340680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 29296411 - 29296350
Alignment:
Q  113 atttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    |||||||| | |||||| ||| |||||| ||||||||||| |||||| ||||||||||||||    
T  29296411 atttctatgaaaaaagataaaataaagttaaattatttttgtataaggtataagttgttttc 29296350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 507158 - 507222
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctat 163  Q
    ||||||| ||| ||||||||||||||||||| ||| |||||| | ||| ||||| ||||||||||    
T  507158 cttatgtataaattatttctataacaaaagataaaataaagttagattgtttttgtataagctat 507222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 2117354 - 2117418
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||| ||||| || |||  ||||||||| |||||| |||||| |||||||||||||||||    
T  2117354 tatttctatgacaaaggataaaacaaagtcaaactattttcatataatctataagttgttttcat 2117418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 2206536 - 2206592
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctat 163  Q
    |||||||||| |||||||||||| ||| ||||||  |||| ||||||||||||||||    
T  2206536 taagttatttttataacaaaagataaaataaagtataattgtttttatataagctat 2206592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 20671996 - 20671920
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||| |||||||| | ||||||| ||| |||||||||||| ||||  |||||||| ||| ||||||||||    
T  20671996 ttatgtataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataagctttaaattgttttcat 20671920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 32975917 - 32975993
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||||||||||| |||||||| | ||| |||||||||| | |||  ||| |||| |||||||||||||||    
T  32975917 ttatgtataagttatttctgtaacaaaatataaaataaagtcaaactgtttcaatagaagcaataagttgttttcat 32975993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 3204658 - 3204562
Alignment:
Q  115 ttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaa 213  Q
    |||||||| |||||| ||| ||||||| || | |||| |||||||||| || ||||||||||  ||  || || ||||||||| |||||||||||||||    
T  3204658 ttctataataaaagataaaataaagtcgaactgttttcatataagctagaaattgttttcataagc--ctctggaaagcttatggaaataagctgaaaa 3204562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 4325440 - 4325377
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagcta 162  Q
    |||||||||||||||||||||||| ||| || ||| || || |||| |||||| ||||||||||    
T  4325440 cttatgtctaagttatttctataataaatgataaaatagagacaaactattttcatataagcta 4325377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 22742312 - 22742371
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataag 166  Q
    |||| ||||| ||||||||| || ||| |||||||||||| |||| ||||||||||||||    
T  22742312 taagctatttgtataacaaaggataaaataaagtcaaattgttttcatataagctataag 22742371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 31420904 - 31420971
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    |||| ||||||||||| ||| |  ||| |||| ||||| |||||||||||||| ||||||||||||||    
T  31420904 taagctatttctataataaatggtaaaataaaatcaaactatttttatataagatataagttgttttc 31420971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 215
Target Start/End: Complemental strand, 33787864 - 33787761
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 211  Q
    |||||||||||||||| | |||  |||||||||||  ||| ||||||| |||||| |||||||||  | ||  ||| | ||||||| |||||| ||||||    
T  33787864 tatttctataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatcttggagagcttatggaaataggctgaa 33787765  T
Q  212 aaca 215  Q
    ||||    
T  33787764 aaca 33787761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 173
Target Start/End: Original strand, 1904789 - 1904827
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgtttt 173  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  1904789 taaagtcaaattatttttatataagctatagattgtttt 1904827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 173
Target Start/End: Original strand, 1909022 - 1909060
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgtttt 173  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  1909022 taaagtcaaattatttttatataagctatagattgtttt 1909060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 6909997 - 6909927
Alignment:
Q  107 taagttatttctataacaaaagaaaaat-taaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| ||||||||||  ||||||||||  |||||| ||||| ||||| |||| ||||||||||||||||||    
T  6909997 taagctatttctataggaaaagaaaaaaataaagttaaattgtttttgtatatgctataagttgttttcat 6909927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 27693556 - 27693494
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||| | |||| ||| ||||||||||||||||| ||||||||| |||| || ||||||    
T  27693556 tttctataatagaagataaaataaagtcaaattattttcatataagctgtaagctgatttcat 27693494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 28621223 - 28621133
Alignment:
Q  118 tataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagct 208  Q
    |||||||||||| ||| |||||| ||||| ||||| ||||||||| ||| ||||| ||| |||||  |||  ||||||||  |||||||||    
T  28621223 tataacaaaagataaaataaagttaaattgtttttgtataagctacaagatgtttacataggctatcttggcaagcttatgaaaataagct 28621133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 30863254 - 30863312
Alignment:
Q  169 gttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    |||||||| |||||  ||||| ||||||| ||| |||||||||||||||||||| ||||    
T  30863254 gttttcataggctagcttgaagagcttatagaagtaagctgaaaacaacttatgtacat 30863312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 142
Target Start/End: Complemental strand, 34544581 - 34544539
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtca 142  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||    
T  34544581 ttatgtataagttatttctataacaaaagataaactaaagtca 34544539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 5550106 - 5550147
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||| |||| |||||||||||||| |||||||||    
T  5550106 taaagtcaaattgttttcatataagctataagctgttttcat 5550147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 6654553 - 6654666
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| ||||||||||||||||||||  | ||| | |||||||||| ||||| | ||| || |||| |||||| ||  ||||  ||| | |||||||     
T  6654553 cttatgtataagttatttctataacaaataataaaattaagtcaaattgtttttgtttaaactttaagctgttttaatatgctatcttggagagcttatg 6654652  T
Q  199 gaaataagctgaaa 212  Q
    ||| ||||||||||    
T  6654653 gaagtaagctgaaa 6654666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 7485164 - 7485123
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| ||||| |||| ||||||||||||||||||||||||    
T  7485164 taaagttaaatttttttcatataagctataagttgttttcat 7485123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 9604823 - 9604864
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| ||||||||||| ||||||||||||| |||||||||    
T  9604823 taaagtaaaattatttttgtataagctataagctgttttcat 9604864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 33069658 - 33069582
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| |||| ||||||||||||||||  | ||| |||||| |  ||||||||||||| ||||||||| |||||||    
T  33069658 cttatgtataagctatttctataacaaaaacacaat-aaagtcgatatatttttatataaactataagtttttttcat 33069582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 34429821 - 34429748
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    |||||| |||||||||||||||| || ||| ||| ||||||| || | ||||  ||||| ||||||||||||||    
T  34429821 ttatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttgtttt 34429748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 769090 - 769154
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||||||||  ||| |||||| || || ||||| ||||||||||||  |||||||||    
T  769090 tatttctataacaaaagctaaaataaagttaatttttttttgtataagctataaactgttttcat 769154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 7354155 - 7354219
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||||||||| ||| |||| || || |||||| ||||||| || ||| |||||||||    
T  7354155 tatttctataacaaaagataaaataaaatcgaactattttcatataagatacaagctgttttcat 7354219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 14282640 - 14282720
Alignment:
Q  142 aaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatg 222  Q
    |||||||||| ||||||| |||||| |||||| ||| ||||   |||| |||||||  ||||||| | |||||||||||||    
T  14282640 aaattattttcatataaggtataagctgtttttatcagctatgatgaagagcttatgcaaataagttaaaaacaacttatg 14282720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 18604729 - 18604669
Alignment:
Q  114 tttctataacaaaaga-aaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    |||||||||||||||| ||||| ||||||||||| || | |||| ||||||||| ||||||    
T  18604729 tttctataacaaaagataaaataaaagtcaaattgttatgatatgagctataagctgtttt 18604669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 27909678 - 27909642
Alignment:
Q  191 agcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  27909678 agcttatggaaataagctgaaaacaacttatggacat 27909642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 31583705 - 31583745
Alignment:
Q  187 gaaaagcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    ||||||||||| |||||||| ||||||||||||||| ||||    
T  31583705 gaaaagcttatggaaataagttgaaaacaacttatggacat 31583745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 32206153 - 32206085
Alignment:
Q  98 acttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataag 166  Q
    |||||||| |||| ||| ||||| ||||||||  || |||||| ||||||||||  |||||||||||||    
T  32206153 acttatgtgtaagctatctctatgacaaaagatgaaataaagttaaattattttagtataagctataag 32206085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 33500612 - 33500540
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttt 172  Q
    |||||| |||| |||||||||||||||||| ||| |||| ||||| | |||  ||||||| |||||| |||||    
T  33500612 ttatgtataagctatttctataacaaaagataaagtaaaatcaaactgtttcaatataagttataagctgttt 33500540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 9e-20; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 10143110 - 10143187
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| ||||||||||||||||||||||| ||| | |||||||| | ||||||||||||||||||||| |||||||    
T  10143110 cttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcat 10143187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 227
Target Start/End: Complemental strand, 29316909 - 29316779
Alignment:
Q  97 tacttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagctta 196  Q
    |||||||||||||| ||| ||| ||||| |||| ||| ||| || ||||| |||| | |||| ||||||| |||||||||| ||||  ||| | | ||||    
T  29316909 tacttatgtctaagctatatctttaacagaagataaaataaggttaaattgttttcacataatctataagctgttttcatcagctatcttggagaactta 29316810  T
Q  197 tcgaaataagctgaaaacaacttatgaacat 227  Q
    | ||||||||||||||| |||||||||||||    
T  29316809 tggaaataagctgaaaagaacttatgaacat 29316779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 6988061 - 6988170
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||||| |||||||||||||||| ||| |||||||||||||||||  ||  || ||||||||||||||||  ||||  ||||| || |||| ||||||||    
T  6988061 taagttttttctataacaaaagataaaataaagtcaaattattttcttactagttataagttgttttcataagctatcttgaagagtttatagaaataag 6988160  T
Q  207 ctgaaaacaa 216  Q
     |||||||||    
T  6988161 atgaaaacaa 6988170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 25609734 - 25609808
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    ||||||| |||| ||||||||||| |||||| ||| ||||||||| |||||||  ||||||||||||||||||||    
T  25609734 cttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctataagttgtttt 25609808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 17952825 - 17952756
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| |||||||||||||||||| ||| |||||||||| |||||| |||||||||| ||| |||||||||    
T  17952825 taagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcat 17952756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 43199360 - 43199429
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||| ||||||||| ||| |||||| ||||||| ||  |||||||||||||||||||||||    
T  43199360 taagttatttctacaacaaaagataaaataaagttaaattatcttcgtataagctataagttgttttcat 43199429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 9878801 - 9878737
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||||||||| ||| |||| ||||| |||||||| ||| ||||||||||||||||||    
T  9878801 tatttctataacaaaagataaaataaactcaaactatttttacatatgctataagttgttttcat 9878737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 226
Target Start/End: Complemental strand, 29628865 - 29628748
Alignment:
Q  108 aagttatttctataacaaaagaaaaatta-aagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||||||||||||||||||||| ||| || |||| |  || ||||| |||||||||||||||||| ||||  ||||  ||| |||  |||| ||||||||    
T  29628865 aagttatttctataacaaaagataaaatataagtta--ttgtttttgtataagctataagttgttctcataagctatcttggaaaatttatggaaataag 29628768  T
Q  207 ctgaaaacaacttatgaaca 226  Q
    |||||||||| |||||||||    
T  29628767 ctgaaaacaatttatgaaca 29628748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 11513858 - 11513913
Alignment:
Q  121 aacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||| ||| |||||||||||| |||| ||||||||||||||||||||||||    
T  11513858 aacaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcat 11513913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 31740078 - 31740019
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtt 171  Q
    |||||||||||| ||||| ||| |||||||||| |||||| |||||||||||||||||||    
T  31740078 tatttctataactaaagataaaataaagtcaaactattttcatataagctataagttgtt 31740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 225
Target Start/End: Complemental strand, 3235514 - 3235390
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| | || ||||| ||||||||| ||||||| ||||||||| | |||  |||||| ||||||| |||||||||   |||  |||||||| ||||     
T  3235514 cttatgtattagctatttttataacaaatgaaaaat-aaagtcaaactgtttc-atataaactataagctgttttcatatactatcttgaaaagtttatg 3235417  T
Q  199 gaaataagctgaaaacaacttatgaac 225  Q
    ||||||||||||||||| |||||||||    
T  3235416 gaaataagctgaaaacagcttatgaac 3235390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 3423899 - 3423830
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttg 169  Q
    |||||| |||||||||| | || ||||||| ||| ||||||||||||||||| |||||| ||||||||||    
T  3423899 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 3423830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 3673745 - 3673822
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| | ||||||||||||||||||| | ||| |||||| ||||| |||| ||||||| |||||||| |||||||    
T  3673745 cttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataagtttttttcat 3673822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 220
Target Start/End: Complemental strand, 43635232 - 43635112
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| |||||| | |||||| ||||||| ||| ||| ||| || |||||||||||| ||||||||||||| ||||  ||||   ||||||||||||     
T  43635232 cttatgtataagttctatctatatcaaaagagaaaataa-gtctaaatatttttatatacgctataagttgttctcataagctatcatgaaaagcttatg 43635134  T
Q  199 gaaataagctgaaaacaactta 220  Q
     ||||||||| |||||| ||||    
T  43635133 aaaataagcttaaaacagctta 43635112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 5133710 - 5133786
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    ||||||| |||| |||||||||||||||||| ||| |||||  ||| | |||||||||||| |||||| ||||||||    
T  5133710 cttatgtataagctatttctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttca 5133786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 11344408 - 11344340
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    |||| |||||||||||||||||| |||  ||||||||||| |||| ||| ||||||||| |||||||||    
T  11344408 taagatatttctataacaaaagataaaagaaagtcaaattgttttcatacaagctataaattgttttca 11344340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 227
Target Start/End: Original strand, 13864589 - 13864714
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcg 199  Q
    |||||| |||| |||||||||||||||||  ||| ||||||| | ||  |||||||||||||||| | | |||||||   ||| |||||  ||||| |||    
T  13864589 ttatgtataagctatttctataacaaaaggtaaaataaagtcgattt--ttttatataagctatatgctattttcataaactattttgacgagcttgtcg 13864686  T
Q  200 aaataagctgaaaacaacttatgaacat 227  Q
    || ||||||||||| |||||||| ||||    
T  13864687 aagtaagctgaaaagaacttatggacat 13864714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 229
Target Start/End: Original strand, 35485881 - 35485985
Alignment:
Q  125 aaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaa 224  Q
    ||||| ||| |||||||||| |||||   |||||||||||||||||||| ||  ||||   |||| ||| ||| ||||| ||||||||||| ||||||||    
T  35485881 aaagataaaataaagtcaaactatttcattataagctataagttgtttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaa 35485980  T
Q  225 catat 229  Q
    |||||    
T  35485981 catat 35485985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 35755633 - 35755557
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||| |||||||||||  ||| | ||| |||||||||||| |||| || |||||||||||||||||||||    
T  35755633 ttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagttgttttcat 35755557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 42907305 - 42907373
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    |||| ||||||||||||| |||||||| |||||| ||||| ||||  | ||||||||||||||||||||    
T  42907305 taagctatttctataacagaagaaaaaataaagttaaattgttttcgtttaagctataagttgttttca 42907373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 3458598 - 3458657
Alignment:
Q  102 atgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagct 161  Q
    ||||||||||||||| |||||||||||| ||| |||||||||| | |||| |||||||||    
T  3458598 atgtctaagttatttttataacaaaagataaaataaagtcaaacttttttcatataagct 3458657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 28803630 - 28803563
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    ||||||||||| ||||||||||| ||| |||||||||| |  ||| |||||||||| |||||||||||    
T  28803630 taagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttc 28803563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 40837557 - 40837502
Alignment:
Q  102 atgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatata 157  Q
    |||| |||| |||||||||||||||||| |||||||||||||||| |||| |||||    
T  40837557 atgtataagctatttctataacaaaagataaattaaagtcaaattgttttcatata 40837502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 656901 - 656787
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||| |||||||||||||||||| ||| || | ||||||| ||||  |||||||| ||||||| ||||||  ||||  ||| | |||||||  |||||||    
T  656901 taagctatttctataacaaaagataaaatataatcaaattgttttcgtataagctgtaagttgatttcataagctatcttgcagagcttatgaaaataag 656802  T
Q  207 ctgaaaacaacttat 221  Q
     ||||||| ||||||    
T  656801 atgaaaactacttat 656787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 2416251 - 2416325
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    ||||||| |||||||||||| || ||||||| ||| | |||| ||||| |||| |||||||||||||| ||||||    
T  2416251 cttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataagctgtttt 2416325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 6227702 - 6227811
Alignment:
Q  112 tatttctataacaaaaga-aaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctga 210  Q
    ||||| |||||||||||| ||||||||| | |||   ||||||||||| |||||||| ||||||||  |||| |||| | ||||||| | || |||||||    
T  6227702 tatttatataacaaaagataaaattaaatt-aaaccgtttttatataaactataagtggttttcataagctattttggagagcttatggtaacaagctga 6227800  T
Q  211 aaacaacttat 221  Q
    |||||||||||    
T  6227801 aaacaacttat 6227811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 10285304 - 10285366
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    |||||||||||||||||  ||| ||| |||||||   ||||||||||||||||||||||||||    
T  10285304 tatttctataacaaaagttaaaataatgtcaaataggttttatataagctataagttgttttc 10285366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 36114639 - 36114581
Alignment:
Q  115 ttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    ||||||||||||||| ||| |||||| ||||| ||||| ||||||| ||||||||||||    
T  36114639 ttctataacaaaagataaaataaagttaaattgtttttgtataagcaataagttgtttt 36114581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 39236584 - 39236502
Alignment:
Q  142 aaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaa 224  Q
    ||||||||||||||||| | |||||||||||| ||   |||  || ||||||||||  ||||||||| |||||||||||||||    
T  39236584 aaattatttttatataaacaataagttgttttaataaactatcttaaaaagcttataaaaataagctaaaaacaacttatgaa 39236502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 39567840 - 39567918
Alignment:
Q  98 acttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| ||| |||| |||||||||||||||||| ||| |||||| ||||| |||  | |||||||||||| |||||||||    
T  39567840 acttgtgtataagatatttctataacaaaagataaaataaagttaaattgtttcaagataagctataagctgttttcat 39567918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 43141834 - 43141932
Alignment:
Q  124 aaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatg 222  Q
    |||||| ||| |||||||||||| |||  |||||||||||||| |||||||||  ||||   |||| || |||| |||||||  |||||||||||||||    
T  43141834 aaaagataaagtaaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatg 43141932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 43259780 - 43259894
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||| ||||||||||||| |||| ||| |||||||||||  ||||| ||||| | | ||| |||||||||  | ||  ||||| ||||||| ||||||||    
T  43259780 taagctatttctataacacaagataaaataaagtcaaatagtttttgtataatcaacaagctgttttcattaggtatcttgaagagcttatggaaataag 43259879  T
Q  207 ctgaaaacaacttat 221  Q
    || |||||| |||||    
T  43259880 ctaaaaacagcttat 43259894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 227
Target Start/End: Complemental strand, 1939456 - 1939336
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttata-taagctataagttgttttcatcggctactttgaaaagcttatcgaaataa 205  Q
    ||||||||||||||||||||||| ||| |||||| ||| |||||| ||| | ||||||||  |||||||||  ||||   || | ||||||| |||||||    
T  1939456 taagttatttctataacaaaagataaaataaagtgaaactattttcatattgagctataa-ctgttttcataagctatactggagagcttatggaaataa 1939358  T
Q  206 gctgaaaacaacttatgaacat 227  Q
    | |||||||| |||||| ||||    
T  1939357 gttgaaaacagcttatggacat 1939336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 3102631 - 3102708
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| |||| ||||| |||| ||||| | ||| |||||||||| ||||||||||||| |||| || |||||||||    
T  3102631 cttatgtataagctatttttatagcaaaatataaaataaagtcaaactatttttatataatctattagctgttttcat 3102708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 12313282 - 12313177
Alignment:
Q  122 acaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttat 221  Q
    |||||||| ||| |||||| ||||||||||| | ||||||| || |||||| |||  ||||  ||| | |||||||  ||||||| ||||| ||||||||    
T  12313282 acaaaagataaaataaagttaaattatttttgtttaagctacaaattgtttacataagctatcttggagagcttatgaaaataaggtgaaatcaacttat 12313183  T
Q  222 gaacat 227  Q
    ||||||    
T  12313182 gaacat 12313177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 39929813 - 39929874
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagtt 168  Q
    |||||||||  |||||||||||| ||| | || ||||||| |||||||||||||||||||||    
T  39929813 taagttattgttataacaaaagataaaatcaaatcaaattgtttttatataagctataagtt 39929874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 227
Target Start/End: Complemental strand, 42817497 - 42817380
Alignment:
Q  110 gttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctg 209  Q
    |||||||||||| ||||||| ||| | |||||||  | |||| |||||||  ||||  |||||||||  |||| | |||| ||||||| ||| ||||||     
T  42817497 gttatttctataccaaaagataaaatgaagtcaagctgttttcatataagtaataaactgttttcataagctattctgaagagcttatggaagtaagcta 42817398  T
Q  210 aaaacaacttatgaacat 227  Q
    ||||||||||| ||||||    
T  42817397 aaaacaacttaagaacat 42817380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 6547856 - 6547912
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctat 163  Q
    ||||||||||||||| ||||||  |||  ||||||||| ||||||||||||||||||    
T  6547856 taagttatttctatagcaaaagtcaaaacaaagtcaaaatatttttatataagctat 6547912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 14666506 - 14666614
Alignment:
Q  119 ataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaact 218  Q
    ||||||||||| ||| |||||||||| |  ||| ||||||| |||||||||||||||   ||||  |||  | ||||||  ||||||| ||||||||||     
T  14666506 ataacaaaagataaaataaagtcaaactgatttcatataagttataagttgttttcacaagctatcttggtatgcttatgaaaataaggtgaaaacaacc 14666605  T
Q  219 tatgaacat 227  Q
    |||||||||    
T  14666606 tatgaacat 14666614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 32694151 - 32694223
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttt 172  Q
    |||||| |||| |||||||||| ||||||| ||| |||| ||| | |||||||||||||  ||||||||||||    
T  32694151 ttatgtataagctatttctatatcaaaagataaaataaaatcagactatttttatataatttataagttgttt 32694223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 40145421 - 40145477
Alignment:
Q  120 taacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||| ||| ||||||||| || ||||||| |||| ||||||||||||||||    
T  40145421 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 40145477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 6993857 - 6993779
Alignment:
Q  97 tacttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||| |||  |||||||| | ||||||| ||| ||| |||||||||| || |||||||||||| |||||||||||    
T  6993857 tacttatgtttaacctatttctaca-caaaagataaaataaggtcaaattatattcatataagctataggttgttttcat 6993779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 7871644 - 7871711
Alignment:
Q  162 ataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaacatat 229  Q
    ||||| |||||||||  |||  |||||| ||||||| ||||||||||||||||| ||||||| |||||    
T  7871644 ataagctgttttcataagctcttttgaagagcttatggaaataagctgaaaacaccttatgatcatat 7871711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 13630413 - 13630338
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    ||||||| |||||||||||| || ||||||| ||  |||||||||| | |||| |||||| | |||||||||||||    
T  13630413 cttatgtataagttatttctctatcaaaagataagataaagtcaaactgttttcatataatcaataagttgttttc 13630338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 34339843 - 34339910
Alignment:
Q  98 acttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataa 165  Q
    |||||||| |||||| ||| || ||||||||| ||| |||||||||||||||||  |||||| |||||    
T  34339843 acttatgtgtaagttgtttttaaaacaaaagataaaataaagtcaaattattttcgtataaggtataa 34339910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 6546935 - 6546981
Alignment:
Q  118 tataacaaaagaaaaattaaagtcaaattatttttatataagctata 164  Q
    |||||||||||| ||| |||||||||||| ||| |||||||||||||    
T  6546935 tataacaaaagataaaataaagtcaaattgtttatatataagctata 6546981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 19629250 - 19629296
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataa 158  Q
    |||||||||||||||| | |||||||||||||||  |||||||||||    
T  19629250 tatttctataacaaaaaataaattaaagtcaaatagtttttatataa 19629296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 19826151 - 19826197
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataa 158  Q
    |||||||||||||||| | |||||||||||||||  |||||||||||    
T  19826151 tatttctataacaaaaaataaattaaagtcaaatagtttttatataa 19826197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 28933765 - 28933839
Alignment:
Q  102 atgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| |||| ||||| |||||||||||| ||| | || |||||||||||| || |||| ||||| ||||||||||    
T  28933765 atgtataagctatttatataacaaaagataaaatcaaatcaaattattttcatttaagttataaattgttttcat 28933839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 149
Target Start/End: Original strand, 31461384 - 31461426
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatt 149  Q
    |||| |||||||||||||||||| ||| |||||||||||||||    
T  31461384 taagctatttctataacaaaagataaaataaagtcaaattatt 31461426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 41809287 - 41809249
Alignment:
Q  189 aaagcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  41809287 aaagcttatggaaataagctaaaaacaacttatgaacat 41809249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 44439484 - 44439418
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    ||||||||||| ||||||||| | ||| |||||| ||| | ||||| |||||||||||| |||||||    
T  44439484 taagttatttccataacaaaatataaaataaagttaaactgtttttgtataagctataaattgtttt 44439418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 4550715 - 4550792
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| |||||| |||| |||| |||||| ||| ||| |||||  | |||| |||||| |||||||||||||||||    
T  4550715 cttatgtataagttgtttccataataaaagataaaataacgtcaagctgttttcatataaactataagttgttttcat 4550792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 13866827 - 13866904
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| |||  |||||||||| ||||||| ||| | |||||||| | ||||||||||| ||||||| | |||||||    
T  13866827 cttatgtataaactatttctatagcaaaagataaaattaagtcaaactgtttttatataatctataagctcttttcat 13866904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 22681305 - 22681240
Alignment:
Q  111 ttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| || ||||||||| |||  |||| |||||| |||| |||||||||||||| |||||||||    
T  22681305 ttatttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcat 22681240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 33942112 - 33942165
Alignment:
Q  123 caaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| ||| |||||||||| | |||| || |||||||||||||||||||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagttgttttcat 33942165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 33944579 - 33944620
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||| |||| ||||||||||||| ||||||||||    
T  33944579 taaagtcaaattgttttcatataagctataaattgttttcat 33944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 37292457 - 37292404
Alignment:
Q  121 aacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttc 174  Q
    ||||||||| ||| |||||| ||| |||||| ||||||||||| ||||||||||    
T  37292457 aacaaaagataaaataaagtaaaactattttcatataagctattagttgttttc 37292404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 40889482 - 40889523
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||||||| | ||||| |||||||||||||||||    
T  40889482 taaagtcaaattatttgtgtataatctataagttgttttcat 40889523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 43911076 - 43911003
Alignment:
Q  154 tataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    ||||||| ||||||||||||||   ||||  ||| ||||||| |   |||||||||||||||||||||||||||    
T  43911076 tataagccataagttgttttcaaaagctatcttggaaagcttgtgataataagctgaaaacaacttatgaacat 43911003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 1742151 - 1742087
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||||||| | ||| | |||||||| | ||| |||||||| |||||| |||||||||    
T  1742151 tatttctataacaaaatataaaatgaagtcaaactctttatatataagatataagctgttttcat 1742087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 176
Target Start/End: Original strand, 2142636 - 2142668
Alignment:
Q  144 attatttttatataagctataagttgttttcat 176  Q
    ||||||||| |||||||||||||||||||||||    
T  2142636 attatttttgtataagctataagttgttttcat 2142668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 5867322 - 5867246
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||| |||||||| ||||||| || || |||||| ||| | |||| | ||||| | ||||||||||||||    
T  5867322 ttatgtctaagctatttctaaaacaaaaaaagaaataaagtaaaagtgttttcacataagttttaagttgttttcat 5867246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 9395083 - 9395195
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaa 213  Q
    ||||||||  |||||| ||| |||||  ||||| |||| |||||| ||||||| |||||||||  | || | || | |||||||  ||||||||||||||    
T  9395083 tttctatagaaaaagataaaataaagctaaattgttttcatataatctataagctgttttcattagttattctgtagagcttatgaaaataagctgaaaa 9395182  T
Q  214 caacttatgaaca 226  Q
    || ||||| ||||    
T  9395183 cagcttataaaca 9395195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 9478238 - 9478302
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctata 164  Q
    |||||| |||| |||||||||||||  ||| ||| |||| ||||| |||||| ||||||||||||    
T  9478238 ttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctata 9478302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 227
Target Start/End: Complemental strand, 10563682 - 10563562
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||| |||||||||||||||||| |   || ||| ||||| ||||| | |||| ||||||||||||||||  ||||   |||| ||||||   |||||||    
T  10563682 taagctatttctataacaaaagatagtatatagtgaaattgtttttttgtaagttataagttgttttcataagctatgctgaagagcttaagaaaataag 10563583  T
Q  207 ctgaaaacaacttatgaacat 227  Q
    ||||||| | |||||| ||||    
T  10563582 ctgaaaatagcttatggacat 10563562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 14209219 - 14209279
Alignment:
Q  103 tgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctat 163  Q
    |||||||| |||||| ||||||||||| ||| |||| ||||| | |||| |||||||||||    
T  14209219 tgtctaagctatttcaataacaaaagataaaataaattcaaactgttttcatataagctat 14209279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 15171189 - 15171233
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaa 144  Q
    |||||| |||||| ||||||||||| |||| ||||||||||||||    
T  15171189 ttatgtataagttttttctataacagaagataaattaaagtcaaa 15171233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 29430695 - 29430770
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||| |||||||||||||||||  ||| |||||||||| | ||||  ||||||||||||| |||| ||||    
T  29430695 ttatgtataagctatttctataacaaaagttaaa-taaagtcaaactgttttcttataagctataagctgttctcat 29430770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 36863732 - 36863680
Alignment:
Q  124 aaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| ||| ||||||||||  ||||||||||||| ||||| ||||||||||    
T  36863732 aaaagataaaataaagtcaaacaatttttatataagttataaattgttttcat 36863680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 37053545 - 37053609
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||| || | ||| |||||||||| | |||| ||||||| |||||||| |||||||    
T  37053545 tatttctataacagaaaataaaataaagtcaaactgttttcatataagttataagtttttttcat 37053609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 43173196 - 43173276
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaaca 215  Q
    ||||||||||||||||| ||||||||||||  ||||||| || |||||  ||| | | ||||| |||||||| | ||||||    
T  43173196 taaagtcaaattattttcatataagctatattttgtttttataggctatcttggagatcttatggaaataagtttaaaaca 43173276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 24235816 - 24235738
Alignment:
Q  98 acttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| ||| ||||||||||||||||||||||| ||  |||||||||| |||||  ||||||||||||||||||||||||    
T  24235816 acttgtgtataagttatttctataacaaaagataatataaagtcaaactatttgaatataagctataagttgttttcat 24235738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 48397587 - 48397661
Alignment:
Q  102 atgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| |||||||||| ||||| |||||| ||| |||||||||||| ||||||| |||||||||||||||||||||    
T  48397587 atgtataagttatttttataataaaagataaaataaagtcaaattgtttttatttaagctataagttgttttcat 48397661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 48365010 - 48364913
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttat 197  Q
    |||||| ||||||||||| ||||||||||| ||| |||||||||||| |||| || || || |||||||||||||||  ||||| ||| |||||||||    
T  48365010 ttatgtataagttatttcgataacaaaagataaaataaagtcaaattgttttcatttacgccataagttgttttcattagctaccttggaaagcttat 48364913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 1395611 - 1395686
Alignment:
Q  101 tatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||| |||| |||||||||||||||||| ||| ||||||||||||||||| ||||||||||| |  |||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctatgaactgttttcat 1395686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 27792810 - 27792932
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| |||| |||||| | ||||||||| ||| ||| |||||| |||||| |||||||||  |||||||||||||   |||   || | |||||||     
T  27792810 cttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagctgcaagttgttttcataaactatcatgtagagcttata 27792909  T
Q  199 gaaataagctgaaaacaacttat 221  Q
    |||||||||||||||||||||||    
T  27792910 gaaataagctgaaaacaacttat 27792932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 10101600 - 10101531
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||||||||||||| ||| |||||| ||||| |||| ||||||| || |||||||||||||    
T  10101600 taagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcat 10101531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 10212525 - 10212456
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||||||||||||| ||| |||||| ||||| |||| ||||||| || |||||||||||||    
T  10212525 taagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcat 10212456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 23952230 - 23952161
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||||||||||||| ||| | |||||||| ||||||| |||||||| |||| |||||||||    
T  23952230 taagttatttctataacaaaagataaaattaagtcaaagtatttttgtataagctgtaagctgttttcat 23952161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 29771755 - 29771820
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttt 172  Q
    ||||||||||||||| ||||||| ||| |||||| |||||||||| |||||| |||||||||||||    
T  29771755 taagttatttctataccaaaagacaaagtaaagtgaaattattttcatataaactataagttgttt 29771820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 51510317 - 51510248
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| |||||||||  ||||||||||| |||||| |||||||||| |||||| |||||||||||||||||    
T  51510317 taaggtatttctatggcaaaagaaaaagtaaagtaaaattattttgatataaactataagttgttttcat 51510248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 37788800 - 37788875
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||||||||| |||||||||||| ||| ||||||| |||||||||  ||||| |||||||||||||||||    
T  37788800 ttatgtataagttattt-tataacaaaagataaaataaagtccaattattttcgtataatctataagttgttttcat 37788875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 221
Target Start/End: Complemental strand, 40122886 - 40122763
Alignment:
Q  97 tacttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagctta 196  Q
    ||||||||| |||| |||||| ||||||||||| ||| |||||||||| | |||| ||| ||||||||||||||||| ||  ||||   | ||||| | |    
T  40122886 tacttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataagttgtttttataagctatcctaaaaagttaa 40122788  T
Q  197 tcgaaataagctgaaaacaacttat 221  Q
    | |||||||||| ||||||||||||    
T  40122787 tggaaataagctaaaaacaacttat 40122763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 32555091 - 32555036
Alignment:
Q  121 aacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||| ||| |||||||||||||||||  |||||||||||||||||||||||    
T  32555091 aacaaaagataaaataaagtcaaattattttcctataagctataagttgttttcat 32555036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 224
Target Start/End: Original strand, 1816540 - 1816646
Alignment:
Q  118 tataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaac 217  Q
    ||||| |||||| ||| |||||||||| | ||||| |||||| ||||||||||||||||  ||||   || | |||||||| |||||||||||||||| |    
T  1816540 tataataaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagc 1816639  T
Q  218 ttatgaa 224  Q
     ||||||    
T  1816640 ctatgaa 1816646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 227
Target Start/End: Complemental strand, 21862293 - 21862179
Alignment:
Q  114 tttctataacaaaagaaaaatta-aagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaa 212  Q
    ||||||| |||||||| ||| || |||||||||| |||| ||||||||||| ||| ||| ||||  ||||  | | | ||||||| ||||||||||||||    
T  21862293 tttctattacaaaagataaaatacaagtcaaattgttttcatataagctatgagtagttctcattagctatctgggagagcttatggaaataagctgaaa 21862194  T
Q  213 acaacttatgaacat 227  Q
    |||||||||| ||||    
T  21862193 acaacttatggacat 21862179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 44061156 - 44061078
Alignment:
Q  98 acttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| ||| |||| |||||||||| ||||||| ||| ||| || ||||| ||||| |||||||||||||||||||||||    
T  44061156 acttctgtataagctatttctatagcaaaagataaaataaggttaaattgtttttctataagctataagttgttttcat 44061078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 10357379 - 10357448
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||||||||||||| ||| ||| || ||||| |||| ||||||| || |||||||||||||    
T  10357379 taagttatttctataacaaaagataaaataatgttaaatttttttcatataagatacaagttgttttcat 10357448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 48323767 - 48323836
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||||||| |||||| ||  |||||||||||| ||||| | |||||||||| ||||||||||    
T  48323767 taagttatttctataataaaagataatataaagtcaaattgtttttctgtaagctataaattgttttcat 48323836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 30956750 - 30956682
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    |||| |||||||||| ||||||| ||| |||||| ||||| ||||| |||| |||||||||||||||||    
T  30956750 taagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttca 30956682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 30972562 - 30972494
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttca 175  Q
    |||| |||||||||| ||||||| ||| |||||| ||||| ||||| |||| |||||||||||||||||    
T  30972562 taagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttca 30972494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 43116559 - 43116483
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||| |||||||||||||||||| ||| | || |||||  ||||| ||||||||||||||| ||||||||    
T  43116559 ttatgtgtaagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataagtcgttttcat 43116483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 10540594 - 10540547
Alignment:
Q  129 aaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  10540594 aaaaaataaagtcaaattaattttatataaactataagttgttttcat 10540547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 22214811 - 22214736
Alignment:
Q  101 tatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||| ||| |||||||||||||||| || ||| |||||| ||||| | || |||||| |||||||||||||||||    
T  22214811 tatgtataaattatttctataacaaaggataaaataaagtgaaattgtattcatataacctataagttgttttcat 22214736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 42084381 - 42084306
Alignment:
Q  101 tatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||| |||| ||||||||||||||| || ||| ||| ||||| || |||| ||||||||||| ||||||||||||    
T  42084381 tatgtataagctatttctataacaaaggataaaataatgtcaacttgttttgatataagctattagttgttttcat 42084306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 45433058 - 45432943
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 211  Q
    ||||||||||| |||||| ||| | |||| ||||| |||| |||| |||||||| |||||||||   |  |   || | ||||||| |||||||||||||    
T  45433058 tatttctataagaaaagataaaatgaagttaaattgttttcatatgagctataaattgttttcacaagtcatcctgtagagcttatggaaataagctgaa 45432959  T
Q  212 aacaacttatgaacat 227  Q
    ||||||||||||||||    
T  45432958 aacaacttatgaacat 45432943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 54775074 - 54775125
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataa 158  Q
    ||||||||||||||||||||||| ||| ||||||||||  ||||||||||||    
T  54775074 taagttatttctataacaaaagataaaataaagtcaaaccatttttatataa 54775125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 206
Target Start/End: Complemental strand, 31337516 - 31337426
Alignment:
Q  116 tctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||| ||||||||| ||| |||||||||| | |||||||||||| |||||||||| |||||  |||| | |  |||||||||| |||||||    
T  31337516 tctaaaacaaaagataaaataaagtcaaactgtttttatataagttataagttgtattcataagctaatctagaaagcttatcaaaataag 31337426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 33882969 - 33883043
Alignment:
Q  102 atgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| ||| ||||||||||||||||||| ||| |||||| |||||||||||||  ||| |||||| | |||||||    
T  33882969 atgtataaattatttctataacaaaagataaaataaagtgaaattatttttatgcaagttataagctattttcat 33883043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 37689508 - 37689450
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataa 165  Q
    |||| ||||| |||||||||||| ||| |||||| |||||||||| |||||||||||||    
T  37689508 taagctatttttataacaaaagataaagtaaagttaaattattttcatataagctataa 37689450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 10526289 - 10526236
Alignment:
Q  129 aaaaattaaagtcaaattatttttatataagctataagttgttttcatcggcta 182  Q
    ||||| ||||||||||||| |||||||||| ||||||||||| ||||| |||||    
T  10526289 aaaaaataaagtcaaattaattttatataaactataagttgtgttcataggcta 10526236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 23530296 - 23530239
Alignment:
Q  120 taacaaaagaaaaattaaagtcaaattattttt-atataagctataagttgttttcat 176  Q
    |||||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||||    
T  23530296 taacaaaagataaaataaagtcaaattatttttcatataaagtataagttgttttcat 23530239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 32095315 - 32095246
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||||||||||||| ||| | |||| ||||| ||||| ||||| |||||||  ||||||||    
T  32095315 taagttatttctataacaaaagataaaattaagttaaattgtttttgtataaactataagccgttttcat 32095246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 35364266 - 35364307
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  35364266 taaagttaaattatttttatataagttataagttgttttcat 35364307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 40665380 - 40665505
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 211  Q
    ||||| ||||| | |||| ||| |||| | ||||||||||| | |||| |||||| |||||||||  | ||  ||| | |||||||  ||||||||||||    
T  40665380 tatttttataatagaagataaactaaaataaaattatttttgtgtaagttataagatgttttcataagttatcttggagagcttataaaaataagctgaa 40665479  T
Q  212 aacaacttatgaacatatgatcataa 237  Q
    |||| ||||||||||| | |||||||    
T  40665480 aacagcttatgaacatgtcatcataa 40665505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 215
Target Start/End: Complemental strand, 24887407 - 24887299
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||| |||||||||||||| ||| ||| |||||||||| | | || |||||||||| ||| |||||||||  ||||   || | ||||||| | ||||||    
T  24887407 taagctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaataag 24887308  T
Q  207 ctgaaaaca 215  Q
    |||||||||    
T  24887307 ctgaaaaca 24887299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 41028983 - 41028939
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaa 143  Q
    ||||||| |||| |||||||||||||||||||||| |||||||||    
T  41028983 cttatgtataagctatttctataacaaaagaaaaaataaagtcaa 41028939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 49587040 - 49586984
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctat 163  Q
    |||| |||||||||||||||||| ||| |||||||||| | |||| |||||||||||    
T  49587040 taagctatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 215
Target Start/End: Complemental strand, 14548804 - 14548737
Alignment:
Q  148 tttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaaca 215  Q
    |||| ||||||||||||||||||||||||  | || | || | ||||||| |||||||||||||||||    
T  14548804 ttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaaca 14548737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 26990685 - 26990739
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttt--tatataagctata 164  Q
    |||||||||||||||||| ||| |||||||||||| ||||  |||||||||||||    
T  26990685 tatttctataacaaaagataaaataaagtcaaattcttttcatatataagctata 26990739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 32703077 - 32703148
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtt 171  Q
    |||||| |||| ||||||||| | |||||| ||| |||| ||||||| |||| ||||||||||||| |||||    
T  32703077 ttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataaattgtt 32703148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 173
Target Start/End: Complemental strand, 35246684 - 35246649
Alignment:
Q  138 agtcaaattatttttatataagctataagttgtttt 173  Q
    ||||||| ||||||||||||||||||||||||||||    
T  35246684 agtcaaactatttttatataagctataagttgtttt 35246649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 227
Target Start/End: Original strand, 42745065 - 42745104
Alignment:
Q  188 aaaagcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  42745065 aaaagcttatggaaataagatgaaaacaacttatgaacat 42745104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 42808932 - 42808979
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatataagct 161  Q
    |||||||||||||||| ||| |||||| ||||| ||||||||||||||    
T  42808932 tttctataacaaaagataaaataaagttaaattgtttttatataagct 42808979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 47217293 - 47217372
Alignment:
Q  97 tacttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| | |||| ||||||| |||||||| | ||| ||| || ||||| | |||| ||||||||||||||||||||||    
T  47217293 tacttatctataagctatttctctaacaaaacataaaataatgtgaaattgtctttacataagctataagttgttttcat 47217372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 8007827 - 8007761
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataa 165  Q
    ||||||| |||| | |||||||||||||||| ||| |||||||||| | || | |||||||||||||    
T  8007827 cttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 8007761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 20192738 - 20192664
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgtttt 173  Q
    ||||||| |||| ||||| |||||||||||| ||| ||||||||||   |||| |||||| ||||||| ||||||    
T  20192738 cttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttt 20192664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 221
Target Start/End: Original strand, 23793545 - 23793644
Alignment:
Q  118 tataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaac 217  Q
    |||||||||||| ||| |||||||||| |  ||| |||||||| ||    || ||||||  ||||  ||| ||||||||| |||||||||||||||||||    
T  23793545 tataacaaaagataaaataaagtcaaaatgatttcatataagcaat----tggtttcataagctatcttggaaagcttatagaaataagctgaaaacaac 23793640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 25195377 - 25195419
Alignment:
Q  114 tttctataacaaaagaaaaattaaagtcaaattatttttatat 156  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||    
T  25195377 tttctataacaaaagataaaataaagtcaaattattttcatat 25195419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 173
Target Start/End: Original strand, 28779330 - 28779368
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgtttt 173  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  28779330 taaagtcaaactattttcatataagctataagttgtttt 28779368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 32064381 - 32064454
Alignment:
Q  102 atgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||| |||||| |||||| ||||||| | ||| ||||||||||||||||||||| || ||||| ||||| |||||    
T  32064381 atgtataagttctttctaaaacaaaaaataaaataaagtcaaattatttttata-aaactatatgttgtgttcat 32064454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 45535401 - 45535355
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataa 158  Q
    |||||||||||||||| | |||||||||||||||  |||||||||||    
T  45535401 tatttctataacaaaaaataaattaaagtcaaatagtttttatataa 45535355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 53736235 - 53736185
Alignment:
Q  109 agttatttctataacaaaagaaaaattaaagtcaaattatttttatataag 159  Q
    ||||||||||||||||||||| ||| ||| |||||| |||||| |||||||    
T  53736235 agttatttctataacaaaagataaaataatgtcaaactattttcatataag 53736185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 21872363 - 21872326
Alignment:
Q  139 gtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  21872363 gtcaaatttttttgatataagctataagttgttttcat 21872326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 23315591 - 23315676
Alignment:
Q  126 aagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaa 211  Q
    |||| ||| |||||||||||| |||| ||||| |||||||| ||||| |||  |||| | | || ||||||| |||||||||||||    
T  23315591 aagataaaataaagtcaaattgttttcatataggctataagatgtttccataagctattctaaagagcttatggaaataagctgaa 23315676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 30574044 - 30573918
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatc 198  Q
    ||||||| |||| |||||||||||  ||||| ||| |||||| || || ||||| ||||| ||||| | |||||||||  ||||  ||| | |||| ||     
T  30574044 cttatgtataagctatttctataa--aaagataaaataaagttaagttttttttttataatctatatgatgttttcataagctatcttggagagctgatg 30573947  T
Q  199 gaaataagctgaaaacaacttatgaacat 227  Q
     | |||||||||||||| |||||||||||    
T  30573946 aacataagctgaaaacagcttatgaacat 30573918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 33307584 - 33307507
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| ||| ||||||||| | ||||||| |||  || | |||| |||||||||||||| |||||| |||||||||    
T  33307584 cttatgtataaattatttctagagcaaaagataaaacaatgccaaactatttttatataagttataagatgttttcat 33307507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 51197859 - 51197791
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||  |||||||||||| | || |||| |||||| |||| ||||||| ||||||||||||||||    
T  51197859 taagttattcgtataacaaaagatagat-aaagacaaattgttttcatataagttataagttgttttcat 51197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 237348 - 237412
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||| |||| ||| |||| | ||||||| || || |||| ||||||||||||||||    
T  237348 tatttctataacagaagataaaataaaataaaattatattcatgtaagttataagttgttttcat 237412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 2152315 - 2152251
Alignment:
Q  109 agttatttctataacaaaagaaaaattaaagt-caaattatttttatataagctataagttgttt 172  Q
    |||||||| |||||||||||| ||| |||||| ||||  | ||||||||||||||||| ||||||    
T  2152315 agttatttttataacaaaagataaaataaagttcaaacaacttttatataagctataaattgttt 2152251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 24605147 - 24605103
Alignment:
Q  100 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaa 144  Q
    |||||| |||||||||||||||||||||||  || ||||||||||    
T  24605147 ttatgtataagttatttctataacaaaagatgaaataaagtcaaa 24605103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 33405286 - 33405222
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||| ||||||  ||| |||||| || || |||| |||||||||||||| |||||||||    
T  33405286 tatttctatagcaaaaggtaaaataaagttaatttgttttcatataagctataagctgttttcat 33405222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 222
Target Start/End: Complemental strand, 33965604 - 33965497
Alignment:
Q  118 tataacaaaagaaaaattaaagtcaaattatttt--tatataagctataagttgttttcatcggctactttgaaaagcttatcg-aaataagctgaaaac 214  Q
    |||||||||||  ||| |||||||||| | ||||  |||| |||||||||| |||||||||  ||||  ||||| ||||||| | ||| ||||||||||     
T  33965604 tataacaaaaggtaaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatcttgaagagcttatggaaaaaaagctgaaaat 33965505  T
Q  215 aacttatg 222  Q
    ||||||||    
T  33965504 aacttatg 33965497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 35450554 - 35450605
Alignment:
Q  124 aaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||| ||||| ||||| ||||  |||||||||||||||||||||||    
T  35450554 aaaagaaaaat-aaagtaaaattgttttcttataagctataagttgttttcat 35450605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 52064537 - 52064485
Alignment:
Q  116 tctataacaaaagaaaaattaaagtcaaattatttttatataagctataagtt 168  Q
    |||| ||||||||| |||||||| |||||||||||| |||||||  |||||||    
T  52064537 tctacaacaaaagataaattaaaatcaaattattttcatataagtcataagtt 52064485  T

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Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 227
Target Start/End: Original strand, 52618949 - 52619069
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataag 206  Q
    |||| |||||||| |||||| ||  || |||||| ||||| |||| ||||||| |||||| ||||||||   ||||  ||||| ||||| |  |||||||    
T  52618949 taagctatttctaaaacaaatgattaaataaagttaaattgttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaataag 52619048  T
Q  207 ctgaaaacaacttatgaacat 227  Q
     |||||| | |||||||||||    
T  52619049 gtgaaaatagcttatgaacat 52619069  T

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Target: scaffold0590 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 1206 - 1140
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataa 165  Q
    ||||||| |||| |||||||||||||||||| ||| |||||||||| |||| | |||||||| ||||    
T  1206 cttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataagccataa 1140  T

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Target: scaffold0275 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 2769 - 2835
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataa 165  Q
    ||||||| |||| |||||||||||||||||| ||| |||||||||| |||| | |||||||| ||||    
T  2769 cttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataagccataa 2835  T

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Target: scaffold0549 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 1840 - 1779
Alignment:
Q  115 ttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||||| ||| |||||| || ||||||| ||||| ||||||||||| ||||||    
T  1840 ttctataacaaaagataaaataaagttaatttattttcatatacgctataagttggtttcat 1779  T

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Target: scaffold0549; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 3930 - 3869
Alignment:
Q  115 ttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||||||||||| ||| |||||| || ||||||| ||||| ||||||||||| ||||||    
T  3930 ttctataacaaaagataaaataaagttaatttattttcatatacgctataagttggtttcat 3869  T

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Target: scaffold0508 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 9907 - 9830
Alignment:
Q  99 cttatgtctaagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    ||||||| ||||||||||||||||||||| | ||| | ||||||||   |||| ||||||| |||| |||||||||||    
T  9907 cttatgtataagttatttctataacaaaaaataaaattaagtcaaaaagttttcatataagttataggttgttttcat 9830  T

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Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 58217 - 58148
Alignment:
Q  107 taagttatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||| |||||||||||| ||  |||||||||||  | || ||||| ||||||||||||||||||    
T  58217 taagttatttatataacaaaagataacataaagtcaaatagtattaatatacgctataagttgttttcat 58148  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 69061 - 69002
Alignment:
Q  113 atttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttt 172  Q
    ||||||||| ||||| | ||| ||||||||||||||||| |||||||| ||||| |||||    
T  69061 atttctataccaaaatataaaataaagtcaaattattttcatataagcaataagctgttt 69002  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 52046 - 51956
Alignment:
Q  135 taaagtcaaattatttttatataagctataagttgttttcatcggctactttgaaaagcttatcgaaataagctgaaaacaacttatgaacat 227  Q
    |||||| ||||| |||| |||||||||||||| |||||||||  | ||  ||| ||| |||| |||||||||  |||||||||||||| ||||    
T  52046 taaagtgaaattgttttcatataagctataagctgttttcattagttatcttggaaaacttaccgaaataag--gaaaacaacttatggacat 51956  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 20130 - 20194
Alignment:
Q  112 tatttctataacaaaagaaaaattaaagtcaaattatttttatataagctataagttgttttcat 176  Q
    |||||||||||| ||||| ||| ||||||||||   || | ||||||||||| ||||||||||||    
T  20130 tatttctataaccaaagataaaataaagtcaaacagttatcatataagctattagttgttttcat 20194  T

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