View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10799_low_10 (Length: 240)
Name: NF10799_low_10
Description: NF10799
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10799_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 26841442 - 26841270
Alignment:
| Q |
1 |
ctgccatgaaattaaacaaataaagaacacttcattcaattaccaaagtttaagagnnnnnnntaataatatattgagggacaaaacatcatgctctaaa |
100 |
Q |
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| T |
26841442 |
ctgccatgagattaaacaaataaagaacacttcattcaattaccgaagttccaaagaaaaaa-taataatatattgagggacaaaacatcatgctctaaa |
26841344 |
T |
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| Q |
101 |
tgtctagacatggattaagatctccaaatagtcagggaggacagactaataactatcgcaatccaaaccaagat |
174 |
Q |
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||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||| |
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| T |
26841343 |
tgtctagacatggattaagatctccaaatagtcggtgaggacagactaataactatctcaatccaaaccaagat |
26841270 |
T |
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